- Ting Shi; Tristan Millington; Chris Robertson; Karen Jeffrey; Srinivasa Vittal Katikireddi; Colin McCowan; Colin R Simpson;
et al. "Risk of winter hospitalisation and death from acute respiratory infections in Scotland". Journal of the Royal Society
of Medicine Online Fir (2024): https://research-portal.st-andrews.ac.uk/en/researchoutput/risk-of-winter-hospitalisation-and-death-from-acute-respiratory-infections-in-scotland(5ea1bb21-76cd-4a17-a16d-391fd85f1ed9).html.
10.1177/01410768231223584
- Tristan Millington; Kirsty Morrison; Karen Jeffrey; Christopher Sullivan; Amanj Kurdi; Adeniyi Fagbamigbe; Ben Swallow; et
al. "Caveats in reporting of national vaccine uptake". Journal of Global Health 14 (2024): https://research-portal.st-andrews.ac.uk/en/researchoutput/caveats-in-reporting-of-national-vaccine-uptake(e60448d1-6eca-4913-adfa-a766a44f3d3e).html.
10.7189/jogh.14.03006
- Ben Swallow. "Ben Swallow's contribution to the Discussion of ‘Martingale Posterior Distributions’ by Fong, Holmes and Walker".
Journal of the Royal Statistical Society Series B: Statistical Methodology (2024): https://doi.org/10.1093/jrsssb/qkad097.
10.1093/jrsssb/qkad097
- Elif E. Firat; Ben Swallow; Robert S. Laramee. "PCP-Ed: Parallel coordinate plots for ensemble data". Visual Informatics
(2023): https://doi.org/10.1016/j.visinf.2022.10.003.
10.1016/j.visinf.2022.10.003
- "Combining rapid antigen testing and syndromic surveillance improves community-based COVID-19 detection in a low-income country".
Nature Communications 13 1 (2022): http://dx.doi.org/10.1038/s41467-022-30640-w.
10.1038/s41467-022-30640-w
- Nigel Shadbolt; Alys Brett; Min Chen; Glenn Marion; Iain J. McKendrick; Jasmina Panovska-Griffiths; Lorenzo Pellis; Richard
Reeve; Ben Swallow. "The challenges of data in future pandemics". Epidemics (2022): https://doi.org/10.1016/j.epidem.2022.100612.
10.1016/j.epidem.2022.100612
- Ben Swallow. "Modelling: Understanding pandemics and how to control them". Epidemics 39 (2022): 100588-100588. http://dx.doi.org/10.1016/j.epidem.2022.100588.
10.1016/j.epidem.2022.100588
- Ben Swallow. "Bayesian hierarchical mixture models for detecting non-normal clusters applied to noisy genomic and environmental
datasets". Australian & New Zealand Journal of Statistics 64 2 (2022): 313-337. http://dx.doi.org/10.1111/anzs.12370.
10.1111/anzs.12370
- "Complex model calibration through emulation, a worked example for a stochastic epidemic model". Epidemics (2022):
100574-100574. http://dx.doi.org/10.1016/j.epidem.2022.100574.
10.1016/j.epidem.2022.100574
- "Challenges for modelling interventions for future pandemics". Epidemics 38 (2022): 100546-100546. http://dx.doi.org/10.1016/j.epidem.2022.100546.
10.1016/j.epidem.2022.100546
- "Challenges in estimation, uncertainty quantification and elicitation for pandemic modelling". Epidemics 38 (2022):
100547-100547. http://dx.doi.org/10.1016/j.epidem.2022.100547.
10.1016/j.epidem.2022.100547
- Nazanin Fekri; Mahboubeh Parsaeian; Abolghasem Pourreza; Ben Swallow; Aminreza Amini; Abbas Rahimi Foroushani. "The impact
of cancer incidence on catastrophic health expenditure in Iran with a Bayesian spatio-temporal analysis". Iranian journal
of public health 51 2 (2022): 438-449. https://research-portal.st-andrews.ac.uk/en/researchoutput/the-impact-of-cancer-incidence-on-catastrophic-health-expenditure-in-iran-with-a-bayesian-spatiotemporal-analysis(a8693414-2ec8-4391-a036-31474d10cb82).html.
10.18502/ijph.v51i2.8697
- Ben Swallow. "Statistical and agent-based modelling of the transmissibility of different SARS-CoV-2 variants in England and
impact of different interventions". Philosophical Transactions of the Royal Society A (2022): http://dx.doi.org/10.1101/2021.12.30.21267090.
10.1101/2021.12.30.21267090
- "Tracking the national and regional COVID-19 epidemic status in the UK using directed Principal Component Analysis". Philosophical
Transactions of the Royal Society A (2022): https://arxiv.org/abs/2110.03626.
10.1098/rsta.2021.0302
- "Visualization for Epidemiological Modelling: Challenges, Solutions, Reflections & Recommendations". Philosophical Transactions
of the Royal Society A (2022): https://arxiv.org/abs/2204.06946.
10.48550/ARXIV.2204.06946
- Ben Swallow. "Development and Evaluation of Two Approaches of Visual Sensitivity Analysis to Support Epidemiological Modeling".
IEEE Transactions on Visualization and Computer Graphics (2022): 1-11. http://dx.doi.org/10.1109/tvcg.2022.3209464.
10.1109/tvcg.2022.3209464
- Liza Hadley; Peter Challenor; Chris Dent; Valerie Isham; Denis Mollison; Duncan A. Robertson; Ben Swallow; Cerian R. Webb.
"Challenges on the interaction of models and policy for pandemic control". Epidemics (2021): https://doi.org/10.1016/j.epidem.2021.100499.
10.1016/j.epidem.2021.100499
- "A Review of Applied Hierarchical Modelling in Ecology: Volume 2 by Kéry and Royle". Journal of Agricultural, Biological
and Environmental Statistics 26 2 (2021): 325-327. http://dx.doi.org/10.1007/s13253-021-00440-8.
10.1007/s13253-021-00440-8
- "Toward Efficient Bayesian Approaches to Inference in Hierarchical Hidden Markov Models for Inferring Animal Behavior". Frontiers
in Ecology and Evolution 9 (2021): http://dx.doi.org/10.3389/fevo.2021.623731.
10.3389/fevo.2021.623731
- "Assessing factors associated with changes in the numbers of birds visiting gardens in winter: Are predators partly to blame?".
Ecology and Evolution (2019): http://dx.doi.org/10.1002/ece3.5702.
10.1002/ece3.5702
- "A spatiotemporal multispecies model of a semicontinuous response". Journal of the Royal Statistical Society: Series C
(Applied Statistics) 67 3 (2018): 705-722. http://dx.doi.org/10.1111/rssc.12250.
10.1111/rssc.12250
- Ben Swallow. "Parametric uncertainty in complex environmental models: a cheap emulation approach for models with high-dimensional
output". arXiv (2017):
- Swallow B; King R; Buckland ST; Toms MP. "Identifying multispecies synchrony in response to environmental covariates.". (2016):
http://europepmc.org/abstract/med/28031803.
10.1002/ece3.2518
- Swallow B; Buckland ST; King R; Toms MP. "Bayesian hierarchical modelling of continuous non-negative longitudinal data with
a spike at zero: An application to a study of birds visiting gardens in winter.". (2016): http://europepmc.org/abstract/med/25737026.
10.1002/bimj.201400081
