???global.info.a_carregar???
I am a cancer immunologist with a strong focus on utilizing the human microbiome for the development of breakthrough cancer therapies. My primary research goal is to harness the human microbiome to develop novel live biotherapeutics aimed at treating, intercepting, and preventing cancer. Since March 2023, I have been leading the Microbiome in Health and Disease Translational Laboratory at GIMM, Portugal. Our lab combines cutting-edge techniques in metagenomics, metabolomics, and immunology to delve into the complex interactions between the microbiome and colorectal cancer, uncovering therapeutic potentials within this interplay. With a PhD in Health Sciences, I have demonstrated a deep commitment to impactful research. My track record includes 15 original articles (e.g. EMBO Mol Med, J Exp Med, Sci Transl Med), collectively cited over 3,500 times (Google Scholar), with multiple papers ranked in the Top 5% of research outputs (Altmetric). My academic journey began in the laboratory of Prof. Philippe Sansonetti at Institut Pasteur, Paris, where I focused on bacterial mechanisms that influence the immune system in chronic disease contexts. This work laid a foundation for my ongoing research into microbiome-immune interactions. In 2013, I expanded my expertise at Cold Spring Harbor Laboratory, New York, where I collaborated with Dr. Egeblad to investigate macrophage and cytotoxic T-cell interactions in tumors, developing innovative protocols for intravital imaging and flow cytometry to capture anti-tumor immune responses in real-time. Later, through a Marie Sklodowska-Curie Individual Fellowship at APC Microbiome Ireland, Cork, I led a project examining how tumor-associated microbiota can alter immune functions and impact colorectal cancer outcomes. Today, as a Principal Investigator, my objective is to build a multidisciplinary research program aimed at understanding how specific bacterial metabolites can be leveraged as novel cancer therapeutics or therapeutic adjuvants. My expertise in metagenomics, faecal-microbiota transplants, and advanced cancer biology research techniques, combined with active collaborations, positions our lab at the forefront of this exciting field, pushing forward the boundaries of microbiome-based cancer therapies.
Identificação

Identificação pessoal

Nome completo
Ana Margarida Santos de Almeida

Nomes de citação

  • Almeida, Ana S.

Identificadores de autor

Ciência ID
FB1E-CB70-29A8
ORCID iD
0000-0001-8997-2639
Google Scholar ID
https://scholar.google.com/citations?user=tkt0TvoAAAAJ&hl=en

Endereços de correio eletrónico

  • anasalmeida@medicina.ulisboa.pt (Profissional)
  • ana.almeida@gimm.pt (Profissional)

Telefones

Telefone
  • (+353) 217999411 Ext.: 47329 (Profissional)

Moradas

  • Avenida Professor Egas Moniz, 1649-028, Lisboa, Lisboa, Portugal (Profissional)

Websites

Domínios de atuação

  • Ciências Médicas e da Saúde - Medicina Básica - Imunologia
  • Ciências Médicas e da Saúde - Medicina Clínica - Oncologia
  • Ciências Naturais - Ciências Biológicas - Microbiologia

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Inglês Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2)
Francês Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador independente (B1) Utilizador proficiente (C1)
Português (Idioma materno)
Formação
Grau Classificação
2023/11/09 - 2023/11/10
Frequentou
The art of supervising students - Skills for effective and empowering supervision course (Outros)
hfp consulting, Alemanha
2020/06/01 - 2020/08/09
Frequentou
Scientists Teaching Science Course (Postgraduate Certificate)
The New York Academy of Sciences, Estados Unidos
2019/12/02 - 2019/12/04
Frequentou
Laboratory Leadership Course for Postdocs (Outros)
Gesellschaft zur Förderung der Lebenswissenschaften Heidelberg GmbH, Alemanha
2019/10/17 - 2019/10/17
Frequentou
ICH Good Clinical Practice for Investigators Refresher Training Course (Outros)
Health Research Board (HRB) Clinical Research Facility Cork, Irlanda
2019/07/19 - 2019/07/19
Frequentou
Workshop “Data management” (Outros)
University College Cork, Irlanda
2017/02/03 - 2017/02/03
Frequentou
Laboratory Animal and Science Training - Animal Surgery Certification Course (Postgraduate Certificate)
LAST Ireland, Irlanda
A
2016/09/07 - 2016/09/08
Frequentou
Laboratory Animal and Science Training - Animal Certification Course (Postgraduate Certificate)
LAST Ireland, Irlanda
A
2016/07/20 - 2016/07/20
Frequentou
ICH Good Clinical Practice for Investigators Training Course (license renewed in 2019) (Postgraduate Certificate)
Health Research Board, Irlanda
2016/06 - 2016/06
Frequentou
Statistics for Researchers Course (Outros)
University College Cork, Irlanda
2016/05/27 - 2016/05/27
Frequentou
Workshop “Teaching and Learning Skills Presentation” (Outros)
University College Cork, Irlanda
2016/05/19 - 2016/05/19
Frequentou
Workshop “Editing and Proofreading for Academics” (Outros)
University College Cork, Irlanda
2008/11/01 - 2012/07/13
Concluído
Ph.D. in Health Sciences (Microbiology and Immunology) in the Lab of Prof. Philippe Sansonetti (Doctor of Philosophy)
Université Pierre et Marie Curie - Paris 6, França

Institut Pasteur Département Biologie cellulaire et Infection, França
"The molecular and cellular characterisation of rhinoscleroma, an infectious disease caused by the bacterium Klebsiella rhinoscleromatis" (TESE/DISSERTAÇÃO)
Aprovada com Distincao e Louvor por Unanimidade
2004/09 - 2008/07
Concluído
Microbiologia (Graduated in The top 3) (Licenciatura)
Universidade de Lisboa Faculdade de Medicina, Portugal
"The Influence of Bile Acids on Liver-Stage Malaria Infection" (TESE/DISSERTAÇÃO)
16.4 (out of 20)
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento
Empregador
2024/10 - Atual Investigador principal (carreira) (Investigação) Gulbenkian Institute for Molecular Medicine, Portugal
Gulbenkian Institute for Molecular Medicine, Portugal
2023/05 - 2024/09 Investigador principal (carreira) (Investigação) Instituto de Medicina Molecular João Lobo Antunes, Portugal
Instituto de Medicina Molecular João Lobo Antunes, Portugal
2016/04 - 2021 Pós-doutorado (Investigação) University College Cork APC Microbiome Institute, Irlanda
2013/05 - 2015/12 Pós-doutorado (Investigação) Cold Spring Harbor Laboratory, Estados Unidos
2012/08 - 2013/05 Pós-doutorado (Investigação) Institut Pasteur, França

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento
Empregador
2024/01/02 - Atual Professor Associado Convidado (Docente Universitário) Universidade de Lisboa Faculdade de Medicina, Portugal
Universidade de Lisboa Faculdade de Medicina, Portugal

Outros

Categoria Profissional
Instituição de acolhimento
Empregador
2022 - 2023 Director of Research and Development, Principal Investigator Tiny Health, Estados Unidos
2018/04/17 - 2019/02/15 Sick leave University College Cork APC Microbiome Institute, Irlanda
2017/10/18 - 2018/04/16 Maternity Leave University College Cork APC Microbiome Institute, Irlanda
2007/09 - 2008/07 Undergraduate student - BSc. final year. Supervisor Prof Maria Mota and Dr Miguel Prudencio Instituto de Medicina Molecular João Lobo Antunes, Portugal
2006/09 - 2007/08 Undergraduate student (part-time). Supervisor Prof Adriano Henriques Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
Projetos

Bolsa

Designação Financiadores
2024/10/01 - Atual Fostering Excellent Research, Training and Innovation in Biomedical Data Science (1,500,000 EUR)
101159926
Team member
Instituto de Medicina Molecular João Lobo Antunes, Portugal
European Commission
Em curso
2023 - Atual Dissecting the role of breast cancer-resident microbiota: identification of novel biomarkers of clinical outcome and putative therapeutic target
21562
Investigador
Instituto de Medicina Molecular João Lobo Antunes, Portugal
Gilead Sciences Inc
Em curso
2023 - 2028 iMM-CARE: Boosting Clinical Research For The Benefit Of Society (15,000,000 EUR)
Team member
Instituto de Medicina Molecular João Lobo Antunes, Portugal
European Commission
Em curso
2021/02/01 - 2021/04/30 Microbiota-immune interaction in colorectal cancer (15,500 EUR, salary for 3 months)
COVID-19 Research Extension Grant
Investigador responsável
University College Cork APC Microbiome Institute, Irlanda
Higher Education Authority
Concluído
2017/04/01 - 2020/07/31 Microbiota-Immune Interaction in Colorectal Cancer (187,866 EUR)
Investigador responsável
University College Cork APC Microbiome Institute, Irlanda
EU Framework Programme for Research and Innovation Marie Sklodowska-Curie Actions
Concluído
2017/07 - 2017/08 Microbiota-immune interaction in colorectal cancer (1,750 EUR)
PARSUK2017
Orientador
University College Cork APC Microbiome Institute, Irlanda
Portuguese Association of Researchers and Students in the UK
Concluído
2008/11 - 2012/07 The molecular and cellular characterization of rhinoscleroma, a neglected disease caused by Klebsiella rhinoscleromatis (137,000 EUR)
SFRH/BD/44873/2008
Bolseiro de Doutoramento
Sorbonne Université - Campus Pierre et Marie Curie, França

Institut Pasteur, França
Fundação para a Ciência e a Tecnologia
Concluído
2007/09 - 2008/09 The influence of bile acids on liver-stage malaria infection (2,500 EUR)
200800012
Undergraduate student (final year BSc in Microbiologia)
Universidade de Lisboa Faculdade de Medicina, Portugal
Gabinete de Apoio à Investigação Científica, Tecnológica e Inovação (GAPIC)

Universidade de Lisboa Faculdade de Medicina
Concluído

Projeto

Designação Financiadores
2023/03/01 - 2028/02/28 Individual Call to Scientific Employment Stimulus - 4th edition - Assistant Researcher (344,000 EUR)
Investigador responsável
Instituto de Medicina Molecular João Lobo Antunes, Portugal
Fundação para a Ciência e a Tecnologia
Em curso

Outro

Designação Financiadores
2024/10 - 2026/03 AGEWISE: Unravelling the Gut-Hormone Axis in Women's Aging
Investigador responsável
Gulbenkian Institute for Molecular Medicine, Portugal
Biocodex Microbiota Foundation
Em curso
Produções

Publicações

Artigo em revista
  1. Brian Healey Bird; Ken Nally; Karine Ronan; Gerard Clarke; Sylvie Amu; Ana S. Almeida; Richard Flavin; Stephen Finn. "Cancer Immunotherapy with Immune Checkpoint Inhibitors-Biomarkers of Response and Toxicity; Current Limitations and Future Promise". Diagnostics (2022): https://www.mdpi.com/2075-4418/12/1/124.
    10.3390/diagnostics12010124
  2. Tosti, Elena; Almeida, Ana S.; Tran, Tam T.T.; Barbachan e Silva, Mariel; Broin, Pilib Ó.; Dubin, Robert; Chen, Ken; et al. "Loss of MMR and TGFBR2 Increases the Susceptibility to Microbiota-Dependent Inflammation-Associated Colon Cancer". Cellular and Molecular Gastroenterology and Hepatology 14 3 (2022): 693-717. http://dx.doi.org/10.1016/j.jcmgh.2022.05.010.
    10.1016/j.jcmgh.2022.05.010
  3. Lijuan Sun; Tim Kees; Ana Santos Almeida; Bodu Liu; Xue-Yan He; David Ng; Xiao Han; et al. "Activating a collaborative innate-adaptive immune response to control metastasis". Cancer Cell (2021): https://doi.org/10.1016/j.ccell.2021.08.005.
    10.1016/j.ccell.2021.08.005
  4. Almeida, Ana S.; Fein, MR; Egeblad, M. "Multi-colour flow cytometry for comprehensive analysis of the tumour immune infiltrate in a murine model of breast cancer". Bio-protocol (2021):
    Acesso aberto • No prelo
  5. Miriam R. Fein*; Xue-Yan He*; Ana S. Almeida; Emilis Bružas; Arnaud Pommier; Ran Yan; Anaïs Eberhardt; et al. "Cancer cell CCR2 orchestrates suppression of the adaptive immune response". Journal of Experimental Medicine 217 10 (2020): https://doi.org/10.1084/jem.20181551.
    Acesso aberto • Publicado • 10.1084/jem.20181551
  6. Balasubramanian; Vanessa Luis-Zuzarte; Syed T; Mullick D; Deb S; Prasad; Meissner J; et al. "Association of Plasmodium berghei With the Apical Domain of Hepatocytes Is Necessary for the Parasite's Liver Stage Development". Frontiers in Cellular and Infection Microbiology (2020): http://dx.doi.org/10.3389/fcimb.2019.00451.
    Acesso aberto • Aceite para publicação • 10.3389/fcimb.2019.00451
  7. Corelli B; Almeida AS; Sonego F; Castiglia V; Fevre C; Brisse S; Sansonetti PJ; Tournebize R. "Rhinoscleroma pathogenesis: The type K3 capsule of Klebsiella rhinoscleromatis is a virulence factor not involved in Mikulicz cells formation.". PLoS neglected tropical diseases (2018): http://europepmc.org/abstract/med/29381692.
    Acesso aberto • Publicado • 10.1371/journal.pntd.0006201
  8. Daniel Öhlund*; Abram Handly-Santana*; Giulia Biffi*; Ela Elyada*; Ana S. Almeida; Mariano Ponz-Sarvise; Vincenzo Corbo; et al. "Distinct populations of inflammatory fibroblasts and myofibroblasts in pancreatic cancer". Journal of Experimental Medicine 214 3 (2017): 579-596. https://doi.org/10.1084/jem.20162024.
    Publicado • 10.1084/jem.20162024
  9. Perurena N; Zandueta C; Martínez-Canarias S; Moreno H; Vicent S; Almeida AS; Guruceaga E; et al. "EPCR promotes breast cancer progression by altering SPOCK1/testican 1-mediated 3D growth.". Journal of hematology & oncology (2017): http://europepmc.org/abstract/med/28103946.
    Publicado • 10.1186/s13045-017-0399-x
  10. Park J; Wysocki RW; Amoozgar Z; Maiorino L; Fein MR; Jorns J; Schott AF; et al. "Cancer cells induce metastasis-supporting neutrophil extracellular DNA traps.". 8 361 (2016): http://europepmc.org/abstract/med/27798263.
    Publicado
  11. Lery, L.M.S.; Frangeul, L.; Tomas, A.; Passet, V.; Almeida, A.S.; Bialek-Davenet, S.; Barbe, V.; et al. "Comparative analysis of Klebsiella pneumoniae genomes identifies a phospholipase D family protein as a novel virulence factor". BMC Biology 12 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84903121012&partnerID=MN8TOARS.
    Publicado • 10.1186/1741-7007-12-41
  12. Fevre, C.*; Almeida, A.S.*; Taront, S.; Pedron, T.; Huerre, M.; Prevost, M.-C.; Kieusseian, A.; et al. "A novel murine model of rhinoscleroma identifies Mikulicz cells, the disease signature, as IL-10 dependent derivatives of inflammatory monocytes". EMBO Molecular Medicine 5 4 (2013): 516-530. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875793179&partnerID=MN8TOARS.
    Acesso aberto • Publicado • 10.1002/emmm.201202023
  13. Fevre, C.; Passet, V.; Deletoile, A.; Barbe, V.; Frangeul, L.; Almeida, A.S.; Sansonetti, P.; Tournebize, R.; Brisse, S.. "PCR-based identification of Klebsiella pneumoniae subsp. rhinoscleromatis, the agent of rhinoscleroma". PLoS Neglected Tropical Diseases 5 5 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-79957991621&partnerID=MN8TOARS.
    Acesso aberto • Publicado • 10.1371/journal.pntd.0001052
Poster em conferência
  1. SALGADO, ANDRÉ; Melo Moreira, Mariana; Serpa, Joana; Milho, Catarina; Almeida, Alexandre; Freitas, Ana Teresa; Almeida, Ana S.. "Enhancing colorectal cancer detection: Integrating Portuguese microbiome and clinical data for early diagnosis". Trabalho apresentado em Microbiome 2024, 2024.
  2. Melo Moreira, Mariana; Serpa, Joana; SALGADO, ANDRÉ; Milho, Catarina; Sousa Guerreiro C; 8E14-4B1D-9F4E; Almeida, Ana S.. "O papel da dieta mediterrânica e seus constituintes na microbiota intestinal e risco de cancro colorretal - protocolo de estudo". Trabalho apresentado em XXVI Congresso Anual da APNEP, 2024.
  3. Almeida, Ana S.. "Deciphering microbiota-immune interactions in colorectal cancer". Trabalho apresentado em Keystone Symposium on Microbiome: Therapeutic Implications, 2019.
  4. Almeida, Ana S.; Tim Kees; Mikala Egeblad. "Modulating innate-adaptive immune cell interactions to achieve tumor rejection". Trabalho apresentado em New York City Tumor Microenvironment 3rd Annual Symposium, 2015.
  5. Almeida, Ana S.; Tim Kees; Mikala Egeblad. "Modulating innate-adaptive immune interactions to achieve tumor rejection". Trabalho apresentado em Cell Symposium: Cancer, Inflammation and Immunity, 2015.
  6. Almeida, Ana S.; Tim Kees; Mikala Egeblad. "Modulating innate-adaptive immune interactions to achieve tumor rejection". Trabalho apresentado em Biology of Cancer: Microenvironment, Metastasis & Therapeutics Meeting, 2015.
  7. Almeida, Ana S.; Mikala Egeblad. "Modulating innate-adaptive immune interactions to achieve tumor rejection". Trabalho apresentado em AACR Special Conference: Tumor Immunology and Immunotherapy: A New Chapter, 2014.
  8. Almeida, Ana S.; Mikala Egeblad. "Modulating innate-adaptive immune interactions to achieve tumor rejection". Trabalho apresentado em Mechanisms and Models of Cancer Meeting, 2014.
  9. Almeida, Ana S.; Cindy Fevre; Philippe Sansonetti; Regis Tournebize. "Characterisation of Klebsiella rhinoscleromatis infection: Mikulicz cells are inflammatory monocytes". Trabalho apresentado em FEMS Congress 4th Congress of European Microbiologists, 2011.
  10. Almeida, Ana S.. "Towards the characterisation of Mikulicz cells, a signature of rhinoscleroma". Trabalho apresentado em EMBO Workshop: Emerging Themes in Infection Biology, 2010.
  11. Almeida, Ana S.. "Towards the characterisation of Mikulicz cells, a signature of rhinoscleroma". Trabalho apresentado em Journees Ecole Doctorale Complexité du Vivant, 2010.
Pré-impressão
  1. Almeida, Ana S; Tran, Tam T T; Ghosh, Tarini S.; Ribiere, Celine; Foley, Cathriona; Azevedo, Lisa A; Pellanda, Paola; et al. "Fiber-associatedLachnospiraceaereduce colon tumorigenesis by modulation of the tumor-immune microenvironment". 2021. http://dx.doi.org/10.1101/2021.02.24.432654.
    10.1101/2021.02.24.432654
  2. Sun, Lijuan; Kees, Tim; Almeida, Ana S.; Liu, Bodu; He, Xue-Yan; Ng, David; Spector, David; et al. "Activating a collaborative innate-adaptive immune response to control breast and ovarian cancer metastasis". 2020. http://dx.doi.org/10.1101/2020.07.13.200477.
    10.1101/2020.07.13.200477
  3. Fein, Miriam R.; He, Xue-Yan; Almeida, Ana S.; Bružas, Emilis; Pommier, Arnaud; Yan, Ran; Eberhardt, Anaïs; et al. "Cancer cell CCR2 orchestrates suppression of the adaptive immune response". 2018. http://dx.doi.org/10.1101/390187.
    10.1101/390187
Recurso online
  1. Almeida, Ana S.. Tiny Health: Conditions & Microbiome Associations. 2023. https://www.tinyhealth.com/science.
  2. Almeida, Ana S.. Tiny Health: Novel insights and metrics. 2022. https://www.tinyhealth.com/science.
Atividades

Apresentação oral de trabalho

Título da apresentação Nome do evento
Anfitrião (Local do evento)
2024/06 Microbial Beginnings: Shaping Childhood Health and Future Wellness Research Center Session from the Núcleo de Formação e Investigação - Departamento de Pediatria HSM
Núcleo de Formação e Investigação - Departamento de Pediatria HSM (Lisboa, Portugal)
2024/06 The connection between the human microbiome and its potential therapeutic role in cancer treatment Sustainable Health towards Cancer Prevention Panel - Cascais International Health Forum - Fórum Saúde XXI
Fórum Saúde XXI (Cascais, Portugal)
2024/04 Recent advancements in understanding the gut microbiota’s impact on tumor progression and immune modulation Annual International (bio)Medical Students (AIMS) Meetings
Faculty of Medicine of the Lisbon Students’ Local Committee (Lisboa, Portugal)
2024/04 The role of the gut microbiome in nutrition and inflammation APNEP Annual Meeting
APNEP - Associação Portuguesa de Nutrição Entérica e Parentérica (Porto, Portugal)
2023/10 Gut microbiota’s impact on tumor progression and immune modulation 2nd Microbiome PT Summit
Biodata.pt; ELIXIR PT; SymbNET (Lisboa, Portugal)
2023/10 Satellite Working Groups - Digestive 1st IMMUNO-ONCOLOGY, SPO-SPI joint meeting
Sociedade Portuguesa de Oncologia and Sociedade Portuguesa de Imunologia (Coimbra, Portugal)
2021/12/17 (xxxx) Center for Integrative Biology Webinar Series 2021 (online)
Universidad Mayor (Chile)
2021/05/09 Microbiota-immune interactions in colorectal cancer The National and International Seminar Series - Umea University
Invited by Dr Andrea Puhar, Molecular Infection Medicine Sweden, Umea University (Umea, Suécia)
2021/05 (xxxx) Portuguese Society for Immunology Annual Meeting 2021 – Current challenges and emerging topics in immunology (online)
Portuguese Society for Immunology (Portugal)
2020/12/09 Role of the gut microbiome in causing, detecting and treating colorectal cancer - Invited speaker Immunotherapies and Innovations for Infectious Diseases, 4th Congress
MabDesign (Lyon, França)
2020/11/19 Post-Docing during the Pandemic - Invited speaker PhD Summit
(Online)
2020/11/10 Fibre-associated Lachnospiraceae reduce colon tumorigenesis by modulation of the tumour-immune microenvironment The Significance of Microbial Metabolomics in Human and Health Symposium - Abstract selected for short talk
New York Academy of Sciences (Online, Estados Unidos)
2020/10/08 Fibre-associated Lachnospiraceae reduce colon tumorigenesis by modulation of the tumour-immune microenvironment Young Immunologists DGfI Conference 2020 - Abstract selected for short talk
DGfI
2018/04/13 The power of the microbiota to modulate the immune response in cancer Seminars of the Department of Bioengineering at IST
Invited by Prof Leonilde Moreira, Instituto Superior Técnico (Lisbon, Portugal)
2016/03 Imaging and modifying tumor-immune cell interactions in tumor rejection IGC Seminar Series Invited Speakers
Invited by Dr Miguel Ferreira, Instituto Gulbenkian da Ciência (Lisbon, Portugal)
2016/02 Imaging and modifying tumor-immune cell interactions in tumor rejection Postdoc Candidate Seminar
Invited by Prof. Paul O'Toole, APC Microbiome Institute (Cork, Irlanda)
2013/01/25 Towards the characterisation of Mikulicz cells, a signature of rhinoscleroma Postdoc Candidate Seminar
Invited by Dr Mikala Egeblad, Cold Spring Harbor Laboratory (New York, Estados Unidos)
2011/12/03 A murine model of human rhinoscleroma identifies specific Mikulicz cells as atypical inflammatory monocytes MicroBiotec11 Congress of the Portuguese Society of Microbiology and Portuguese Society of Biotechnology - Abstract selected for short talk
Portuguese Society of Microbiology (Braga, Portugal)
2009/10/12 Towards the characterisation of Mikulicz cells, a signature of rhinoscleroma Annual Retreat Cellular Biology and Infection Department of Institut Pasteur
Institut Pasteur (La Colle sur Loup, França)

Orientação

Título / Tema
Papel desempenhado
Curso (Tipo)
Instituição / Organização
2023 - Atual The role of the Mediterranean Diet and its constituents in gut microbiota and colorectal cancer progression
Orientador de Joana Serpa
Clinical Nutrition (Mestrado)
Universidade de Lisboa Faculdade de Medicina, Portugal
2024 - 2028 Enhancing Colorectal Cancer Risk Prediction: Integrating Microbiome Data and Clinical Information with Advanced Machine Learning Pipelines
Orientador de André Filipe Cisneiros Ferreira Salgado
Ciências de Engenharia (Doutoramento)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2024 - 2027 Unravelling the Gut-Joint Axis: Implications for Autoimmunity
Coorientador de Inês Correia Almada
Programa Doutoral do Centro Académico de Medicina de Lisboa (ramo de Medicina; ramo de Ciências Biomédicas; ramo de Ciências e Tecnologias da Saúde) (Doutoramento)
Universidade de Lisboa Faculdade de Medicina, Portugal
2019 - 2019/10 Characterisation of Paired Oral and Gut Bacterial Isolates Identified in Colorectal Cancer Patients
Coorientador de Ms. Jill O'Sullivan
MSc. student in Bioinformatics and Computational Biology (Awarded a Quercus Academic Scholarship) (Mestrado)
University College Cork, Irlanda
2019/01 - 2019/04 Characterisation of oral bacteria isolated from colorectal tumours
Coorientador de Ms. Shannon Lucey
BSc. Final Year student in Microbiology, University College Cork (Licenciatura/Bacharelato)
University College Cork, Irlanda
2018/02 - 2018/11 Deciphering the identity of oral and gut bacteria in colorectal cancer
Coorientador de Ms. Lisa A. Azevedo
MSc. student in Biological Engineering (Awarded a PARSUK Xperience fellowship and an ERASMUS+ grant) (Mestrado)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Organização de evento

Nome do evento
Tipo de evento (Tipo de participação)
Instituição / Organização
2019 - Atual Organizer and moderator of the Coffee with the PI seminar series at APC Microbiome Ireland, Cork. Leaders in the microbiome field are interviewed in a Q&A format. PIs invited to date: Prof Colin Hill, Prof Douwe Van Sinderen, Dr Pauline Scalan (2019)
Mesa-redonda (Presidente da Comissão Organizadora)
University College Cork APC Microbiome Institute, Irlanda
2017 - Atual Project coordinator and organizer of the Native Scientist Portuguese Workshops in Cork, for children 6 to 12 years old (2017)
Oficina (workshop) (Presidente da Comissão Organizadora)
Native Scientist, Reino Unido
2020/09/23 - 2020/09/23 Organizer and moderator of the Panel Discussion: How to Land a Position in Academia, Sept 23rd, 2020 (online) Guest speakers: Dr. Ines Sequeira (Queen Mary University, UK), Dr. Pamela Schnupf (Institut Necker Enfants Malades, France), Dr Jacob Allen (University of Illinois, USA) and Dr Alison Twelvetrees (University of Sheffield, UK) (2020/09/23 - 2020/09/23)
Oficina (workshop) (Presidente da Comissão Organizadora)
University College Cork APC Microbiome Institute, Irlanda
2020/05 - 2020/05 Organization of the first APC Microbiome Ireland Postdoctoral Scientific Conference. Responsible for inviting prominent scientists from across Europe to give seminars and discuss career options with postdocs, securing funding, and event planning (postponed due to the COVID-19 pandemic) (2020/05 - 2020/05)
Conferência (Coorganizador)
University College Cork APC Microbiome Institute, Irlanda
2014 - 2015 Co-organisation of PAPSummer 2015, a fully-funded summer research program in the USA for undergraduate Portuguese students. It included fundraising (28,000EUR) and revision of over 500 applications (2014 - 2014)
Outro (Coorganizador)
Portuguese American Postgraduate Society, Estados Unidos
2014/11 - 2014/11 Co-organisation of the Public Lecture: Ebola: Fact and Fiction: Demystifying the Ebola Virus, 50-70 attendees. Demystifying Sciences Series (2014/11 - 2014/11)
Seminário (Coorganizador)
Cold Spring Harbor Laboratory, Estados Unidos

Participação em evento

Descrição da atividade
Tipo de evento
Nome do evento
Instituição / Organização
2019/12/02 - 2019/12/04 EMBO Laboratory Leadership Course for Postdocs, Heidelberg, Germany.
Oficina (workshop)
EMBO Laboratory Leadership Course for Postdocs
2019/10/17 - 2019/10/17 ICH Good Clinical Practice for Investigators Refresher Training Course, facilitated by the Health Research Board (HRB) Clinical Research Facility Cork
Oficina (workshop)
ICH Good Clinical Practice for Investigators Refresher Training Course
University College Cork, Irlanda
2019/07/26 - 2019/07/26 Workshop “Data management”
Oficina (workshop)
Data management
University College Cork, Irlanda
2019/07/19 - 2019/07/19 Workshop “New Horizons: Sourcing and Accessing Non-Academic Career Opportunities”
Oficina (workshop)
New Horizons: Sourcing and Accessing Non-Academic Career Opportunities
University College Cork, Irlanda
2019/02/20 - 2019/02/20 Masterclass: Research Supervision, by Dr Hugh Kearns (Flinders University, Adelaide, Australia)
Oficina (workshop)
Masterclass: Research Supervision
University College Cork, Irlanda
2017/01/13 - 2017/01/13 Famelab Training Course in Science Communication
Oficina (workshop)
Famelab Training Course in Science Communication
Tyndall National Institute, Irlanda
2016/06/10 - 2016/06/10 Workshop “Supervising and Working with PhD students”, Postdoc Development Hub
Oficina (workshop)
Supervising and Working with PhD students
University College Cork, Irlanda
2016/06 - 2016/06 Statistics for Researchers Course
Oficina (workshop)
Statistics for Researchers Course
University College Cork, Irlanda
2016/05/27 - 2016/05/27 “Teaching and Learning Skills Presentation”
Oficina (workshop)
Teaching and Learning Skills Presentation
University College Cork, Irlanda
2016/05/19 - 2016/05/19 “Editing and Proofreading for Academics”
Oficina (workshop)
Editing and Proofreading for Academics
University College Cork, Irlanda
2016/05 - 2016/05 Participation at the UCC Spring Open Day, Alimentary Adventures
Exposição
Public Outreach Event: Alimentary Adventures
University College Cork, Irlanda
2014/10/26 - 2014/10/26 “Conflict Resolution Skills: In and Out of the Lab”
Oficina (workshop)
Conflict Resolution Skills: In and Out of the Lab
The New York Academy of Sciences, Estados Unidos
2014/10/09 - 2014/10/09 Training course “How to Work with Advocates”, webinar by Susan G. Komen Foundation for Breast Cancer Research, USA.
Oficina (workshop)
How to Work with Advocates
2014/06 - 2014/06 Public Lecture: How did I become a Scientist? for 40 Portuguese senior high school students from Escola Secundária Emídio Navarro, Almada, Portugal.
Seminário
Outreach event for high school students
2014/05/12 - 2014/05/13 Software Carpentry Bootcamp
Oficina (workshop)
Software Carpentry Bootcamp
Cold Spring Harbor Laboratory, Estados Unidos
2014/04 - 2014/04 Teaching Class, Professor for a Day - 20 junior high school students
Outro
Outreach event - Teaching Class, Professor for a Day
Cold Spring Harbor Laboratory, Estados Unidos
2014/02 - 2014/02 Public Lecture: Fighting cancer with our own body, 50-70 attendees. Demystifying Science Series
Seminário
Fighting cancer with our own body
Cold Spring Harbor Laboratory, Estados Unidos
2013/11/14 - 2013/11/14 Grant Writing Workshop
Oficina (workshop)
Grant Writing Workshop
Cold Spring Harbor Laboratory, Estados Unidos
2013/10/02 - 2013/10/04 Fundamentals of Cancer Biology workshop organized by the National Institute of Health (NIH)
Oficina (workshop)
Fundamentals of Cancer Biology
Cold Spring Harbor Laboratory, Estados Unidos

Júri de grau académico

Tema
Tipo de participação
Nome do candidato (Tipo de grau)
Instituição / Organização
2023/06/22 Doctoral exams for Master Ana Catarina Pires Martins
Arguente
Ana Catarina Pires Martins (Doutoramento)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Arbitragem científica em conferência

Nome da conferência Local da conferência
2023/10/26 - 2023/10/27 2nd Microbiome PT Summit Biodata.pt; ELIXIR PT; SymbNET

Curso / Disciplina lecionado

Disciplina Curso (Tipo) Instituição / Organização
2024/02/20 - 2024/02/20 Microbiome (Doutoramento) Universidade de Lisboa Faculdade de Medicina, Portugal
2023/10/20 - 2023/10/20 Guest Lecturer, MSc. in Clinical Nutrition, Faculdade de Medicina da Universidade de Lisboa, Portugal Clinical Nutrition (Mestrado) Universidade de Lisboa Faculdade de Medicina, Portugal
2020/11/24 - 2020/11/24 Cancer Immunology and Immunotherapy Module (30 students) 4th-year Pharmaceutical and Biotechnology BSc. (Bachelor) Munster Technological University Cork, Irlanda
2020/01 - 2020/04 Lecturer, Immunology - Host Response to Pathogens (150 students) Immunology - Host Response to Pathogens (Bachelor) University College Cork, Irlanda

Entrevista (jornal / revista)

Descrição da atividade Jornal / Forum
2020/07/16 Research Highlight for Fein et al, Journal of Experimental Medicine, 2020 eCancer
2020/07/15 Research Highlight for Fein et al, Journal of Experimental Medicine, 2020 Science Magazine
2020/07/15 Research Highlight for Fein et al, Journal of Experimental Medicine, 2020 Eureka Alert
2019/07/15 Research highlight for Ohlund et al, Journal of Experimental Medicine, 2017 TheScientist
2017/02/24 Research highlight for Ohlund et al, Journal of Experimental Medicine, 2017 ecancer
2017/02/23 Research highlight for Ohlund et al, Journal of Experimental Medicine, 2017 EurekAlert
2016/10/22 Research highlight for Park J et al, Science Translational Medicine, 2016 International Business Times
2016/10/19 Research highlight for Park J et al, Science Translational Medicine, 2016 EurekAlert
2013/02/16 Newspaper article (Publico) about the foundation of Association des Diplomes Portugais en France (AGRAFr) Publico

Membro de associação

Nome da associação Tipo de participação
2021 - Atual American Association of Immunologists
2020 - Atual European Association for Cancer Research
2020 - Atual Society for Immunotherapy of Cancer
2020 - Atual Portuguese Association of Immunology
2014 - Atual American Association for Cancer Research
2014 - Atual New York Academy of Sciences
2013 - 2017 Portuguese Association of Microbiology

Membro de comissão

Descrição da atividade
Tipo de participação
Instituição / Organização
2020 - 2021 Member of the HR Excellence in Research Focus Group at University College Cork
Membro
University College Cork, Irlanda
2017 - 2021 Native Scientist Coordinator and Project Manager for Portuguese in Ireland. Native Scientist is a non-profit organization that connects migrant pupils and scientists to promote science and language literacy and celebrate diversity in science, education and society.
Coordenador
Native Scientist, Reino Unido
2019 - 2020 APC Microbiome Ireland Postdoctoral Association. Co-founder and Chair. As chair of the association, I was responsible to manage and supervise all areas of action, including the organization of career events and workshops, and liaison between postdocs and APC director and management team.
Presidente / Vice-presidente
2015 - 2015 Chair and member of the Review Committee of the PAPSummer 2015 Award, funded by the Portuguese-American Postgraduate Society (PAPS)
2013 - 2015 Member of the Demystifying Science Group at Cold Spring Harbor Laboratory. Organisation of bi-annual seminars for a general public audience to promote the understanding and impact of the scientific work to the public
Membro
Cold Spring Harbor Laboratory, Estados Unidos
2013 - 2013 Co-founder of AGRAFr - Association des Diplomes Portugais en France - created by a group of Portuguese researchers in Paris, AGRAFr aims to develop multidisciplinary synergy covering all areas of knowledge and to foster exchange experiences and contacts between Portugal and France
Membro
Association des Diplomes Portugais en France, França

Outro júri / avaliação

Descrição da atividade Instituição / Organização
2016 - Atual Peer Review Board of Bio-Protocol
2020/07 - 2020/07 Reviewer for the Luxembourg National Research fund (FNR) CORE Multi-annual thematic research programme
2015 - 2015 Chair and member of the Review Committee of the PAPSummer 2015 Award, funded by the Portuguese-American Postgraduate Society (PAPS) Portuguese American Postgraduate Society, Estados Unidos
2014 - 2014 Member of the Review Committee of the FLAD Life Science 2014 Award: Cancer & Cell Biology

Tutoria

Tópico Nome do aluno
2014/09 - 2015/07 Using our natural defenses to fight cancer Ms. Seungmin Yi (senior high school student) CSHL Partners for the Future Program
2015 - 2015 Visualizing T-cell, macrophage and cancer cell interactions in vivo and in vitro Ms. Devinn Lambert. PhD student (lab rotation), Watson School in Biological Sciences, CSHL
2014 - 2014 EPCR promotes breast cancer progression by altering SPOCK1-mediated 3D growth - Training in polychromatic flow cytometry Ms. Naiara Perurena (PhD visiting student, 3 months)
Distinções

Prémio

2021 Justice, Equity, Diversity and Inclusion Award
Life Science Editors Foundation, Estados Unidos
2021 American Association of Immunologists Trainee Award
American Association of Immunologists Inc, Estados Unidos
2020 Award for Best Talk at the Young Immunologists DGfI Conference
2004 Outstanding Academic Merit Award - Prémio Dr. Teixeira de Matos, Lyons Club
Lyons Club , Portugal

Outra distinção

2022 Individual Call to Scientific Employment Stimulus - 4th Edition - Assistant Researcher
Fundação para a Ciência e a Tecnologia, Portugal
2021 COVID-19 Research Extension Grant by the Irish Higher Education Authority
Higher Education Authority, Irlanda
2020 Training Grant, Erasmus+ Funding for Staff Training Visit
European Commission, Bélgica
2017 Postdoctoral Fellowship, H2020 Marie Sklodowska-Curie Actions Individual Fellowship (Reintegration Panel)
European Commission, Bélgica
2017 Research Grant, Portuguese Association of Researchers and Students in the UK (PARSUK) Xperience 2017
Fundação Calouste Gulbenkian, Portugal

Portuguese Association of Researchers and Students in the UK , Reino Unido
2008 FCT Doctoral Fellowship
Fundação para a Ciência e a Tecnologia, Portugal
2007 Pre-doctoral Research Fellowship
Universidade de Lisboa Faculdade de Medicina, Portugal

Gabinete de Apoio à Investigação Científica, Tecnológica e Inovação (GAPIC), Portugal