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João received his degree in Biomedical Engineering from the University of Coimbra, during which he carried a MSc thesis in bioinformatics and machine learning approaches to genetic data at the University of Pavia, Italy. He completed his PhD in Health Sciences - Biomedical Sciences in 2016, at the University of Coimbra, during which he was particularly interested in the application of functional magnetic resonance imaging (fMRI) and electroencephalographic (EEG) data to study cognitive neuroscience and visual perception in humans. Afterward, he put a clear translational focus in his research efforts, namely on the use of neuroimaging to study human brain structure and function, both in the context of health and disease. He had a postdoc position in a project with the objective of fMRI and functional near-infrared spectroscopy (fNIRS) to predict neurodevelopmental outcomes in newborns with perinatal asphyxia. João was then awarded in an international highly competitive scientific employment program (FCT¿s individual CEEC program) for personal funding, and secured funding as the Principal Investigator of a project (FCT¿s R&D projects) to investigate novel multimodal imaging biomarkers of neuronal connectivity in multiple sclerosis. In parallel, he was involved in several other data science and medical imaging projects aiming at developing brain imaging biomarkers in clinical populations (e.g., genetic spinocerebellar ataxia type 3, diabetes type 2, neurofibromatosis type 1, schizophrenia, and bipolar disorder). The recognition of his qualifications, both at the scientific and management level, led to the invitation to integrate the Executive Board of the Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), as well as to develop and coordinate one of its strategic work packages, for research on radiomics and data science in medical imaging applied to neuroscience, cardiology, and oncology. In 2022, João was competitively admitted to the Short-term Research Internship Program at the University of Texas at Austin, under the UT Austin-Portugal program, and was therefore a visiting scholar at UT Austin, during which period he was trained at the Biomedical Imaging Center. Currently, from April of 2023, João is a postdoctoral researcher at the Neuropsychiatry Unit of Champalimaud Research, at Champalimaud Foundation. He is working mainly in an ERC-funded project to investigate feeding behavior with several data types and analyses techniques, although he also integrates other projects in the Unit, mainly providing expertise in biostatistics and data science applied to medical imaging data. João authored/co-authored 42 articles in journals and conferences, 11 as first author and 8 as last author. João has also been reviewer of 21 papers in multidisciplinary journals and carried editorial activities in 3 journals, including the coordination of 1 research topic. In addition, he has done 27 oral and poster communications as presenter and co-authored other 71 communications in national and international conferences. João delivered 14 invited oral presentations as well and received 10 awards for scientific outputs. João was the Principal Investigator of a competitive project (250K¿) and co-PI of another project (250K¿). He has supervised 1 postdoc, 4 PhD students (ongoing) and 9 MSc students (8 concluded, 1 ongoing). João teaches medical imaging seminars in several courses and created the course of ¿emergent biomedical technologies¿ for undergraduate, master, and doctoral students of Biomedical Engineering, Medicine and Pharmacy. Finally, João was involved in the organization of several scientific events and public science dissemination, such as a symposium at the FENS Regional Meeting (FRM) 2021 entitled ¿Brain imaging in neuropsychiatric disorders: innovation and translation¿, the 7th Iberian Congress on Perception in 2017, and the 1st ISMRM Iberian Chapter Annual Meeting in 2021.
Identification

Personal identification

Full name
João Valente Duarte

Citation names

  • Duarte, João V

Author identifiers

Ciência ID
D818-AED8-8AE3
ORCID iD
0000-0001-8586-9554
Google Scholar ID
FNcmSkoAAAAJ&hl
Researcher Id
B-3788-2018
Scopus Author Id
40161196700

Email addresses

  • joao.v.duarte@fmed.uc.pt (Professional)
  • joao.duarte@research.fchampalimaud.org (Professional)
  • joaovduarte@gmail.com (Personal)

Telephones

Telephone
  • (+351) 210480200 (Professional)

Addresses

  • Centro Champalimaud, Avenida de Brasília, 1400-038, Lisboa, Lisboa, Portugal (Professional)

Websites

Knowledge fields

  • Medical and Health Sciences - Basic Medicine - Neurosciences
  • Engineering and Technology - Medical Engineering - Medical Engineering
  • Medical and Health Sciences - Clinical Medicine - Radiology, Nuclear Medicine and Medical Imaging
  • Medical and Health Sciences - Clinical Medicine - Clinical Neurology
  • Medical and Health Sciences - Clinical Medicine - Psychiatry

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Italian Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2022
Concluded
Symposium PET for brain connectivity: back to the future? (Glasgow, Scotland - virtual) (Outros)
Molecular Connectivity Working Group, United Kingdom
Advanced training certification
2022
Concluded
fMRI Acquisition and Analysis Course (Atlanta, USA - virtual) (Outros)
TReNDS Center, United States
Advanced training certification
2022
Concluded
MRtrix3 workshop (Edinburgh, Scotland) (Outros)
MRtrix group - University of Edinburgh, United Kingdom
Advanced training certification
2021
Concluded
CONN Toolbox for Functional Connectivity Analysis (Massachusetts, USA - virtual) (Outros)
Athinoula A. Martinos Center for Biomedical Imaging, United States
Advanced training certification
2019
Concluded
Summer School - Methodology of study design and statistical analysis in Multiple Sclerosis research (Dublin, Ireland) (Outros)
European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS), Switzerland
Advanced training certification
2019
Concluded
ExploreDTI Workshop (Budapest, Hungary) (Outros)
PROVIDI Lab - Image Sciences Institute, University Medical Center Utrecht, Netherlands

MR Research Center, Semmelweis University, Hungary
Advanced training certification
2017
Concluded
ARTscientific 2017 - fNIRS symposium (Otterlo, Netherlands) (Outros)
Artinis Medical Systems, Netherlands
Advanced training certification
2016/09/23
Concluded
Health Sciences - Biomedical Sciences (Doutoramento)
Faculty of Medicine, University of Coimbra, Portugal
"The role of long-range neural oscillatory synchrony as a mechanism underlying in perceptual coherence" (THESIS/DISSERTATION)
Approved unanimously, with Distinction and Honors
2014
Concluded
Advanced Course on Analysis Methods and Modelling in Biomedical Research (Coimbra, Portugal) (Outros)
IBILI - Faculdade de Medicina da Universidade de Coimbra, Portugal
Advanced training certification
2014
Concluded
Turbo BrainVoyager Course - real-time analysis of fMRI (Maastricht, Netherlands) (Outros)
Universiteit Maastricht Faculty of Psychology and Neuroscience, Netherlands
Advanced training certification
2012
Concluded
International Workshop on Pattern Recognition in Neuroimaging (London, United Kingdom) (Outros)
University College London Department of Computer Science, United Kingdom
Advanced training certification
2011
Concluded
1st ANIFC fMRI School - BrainVoyager Course (Coimbra, Portugal) (Outros)
ANIFC - Associação Nacional de Imagiologia Funcional Cerebral, Portugal
Advanced training certification
2010
Concluded
5th MBIC fMRI course (Maastricht, Netherlands) (Outros)
Universiteit Maastricht Faculty of Psychology and Neuroscience, Netherlands
Advanced training certification
2009/07/28
Concluded
Biomedical Engineering (Mestrado integrado)
Major in Clinical Informatics and Bioinformatics
Faculty of Sciences and Technology, University of Coimbra, Portugal

Università degli Studi di Pavia Facoltà di Ingegneria, Italy
"Machine learning approaches in Genome-Wide Association Studies: SNP2Net, a tool for gene-based predictive modeling" (THESIS/DISSERTATION)
Affiliation

Science

Category
Host institution
Employer
2023/04 - Current Postdoc (Research) Fundação Champalimaud, Portugal
Fundação Champalimaud, Portugal
2019/04 - 2023/03 Researcher (Research) Universidade de Coimbra, Portugal
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
(...)
2022/10 - 2022/12 Visiting Researcher (Research) The University of Texas at Austin Dell Medical School, United States
The University of Texas at Austin Dell Medical School, United States
2016 - 2019 Postdoc (Research) Universidade de Coimbra, Portugal
Faculty of Medicine, University of Coimbra, Portugal
2016/03 - 2016/10 Research Assistant (Research) Universidade de Coimbra, Portugal
Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2015/07 - 2015/12 Research Assistant (Research) Universidade de Coimbra, Portugal
Universidade de Coimbra Instituto de Investigação Clínica e Biomédica de Coimbra, Portugal
2009/10 - 2011/06 Research Assistant (Research) Universidade de Coimbra, Portugal
IBILI - Faculty of Medicine, University of Coimbra , Portugal
(...)

Others

Category
Host institution
Employer
2024 - Current Integrated researcher Programa Champalimaud de Investigacao, Portugal
Fundação Champalimaud, Portugal
2021 - 2023 Integrated researcher Intelligent Systems Associate Laboratory (LASI), Portugal
LASI - University of Coimbra, Portugal
2018 - 2023 Integrated researcher Coimbra Institute of Biomedical Imagind and Translational Research (CIBIT), Portugal
Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2009 - 2018 Integrated researcher Institute of Biomedical Research in Light and Image (IBILI), Portugal
Faculty of Medicine, University of Coimbra, Portugal
2011/07 - 2015/06 PhD Student Fellow Fundação para a Ciência e a Tecnologia, Portugal
Faculty of Medicine, University of Coimbra, Portugal
Projects

Grant

Designation Funders
2011/07 - 2015/06 The role of long-range neural oscillatory synchrony as a mechanism underlying in perceptual coherence
SFRH/BD/69735/2010
PhD Student Fellow
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded

Contract

Designation Funders
2023/04 - Current CalorieRL - Reinforcement learning from post-ingestive calories: from body to brain in health and disease
Integration into Research Grant Fellow
Fundação Champalimaud, Portugal
European Research Council
Ongoing
2025 - 2026 PODict - Cognitive motor interference to predict Postoperative Delirium
2023.15471.PEX
Researcher
Fundação Champalimaud, Portugal
Fundação para a Ciência e a Tecnologia
2023 - 2026 BS2C - Non-invasive Brain Stimulation for Social Cognitive impairment in Schizophrenia
FLAD 2023
Researcher
Fundação Luso-Americana para o Desenvolvimento
2021/03/01 - 2024/04/30 NEUROHYST - Neural mechanisms underlying positive and negative perceptual hysteresis (co-PI)
PTDC/PSI-GER/1326/2020
Researcher
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2019/04 - 2023/03 Novel multimodal imaging biomarkers of neuronal connectivity in Multiple Sclerosis (individual)
Principal investigator
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2021 - 2023 BRAINSTEM - A functional account of the noradrenergic system in healthy ageing
EXPL/PSI-GER/0349/2021
Researcher
University of Coimbra, Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT), Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2021/03 - 2022/02 B-Liver - Colorectal cancer liver metastases subtypes and Prognostic Stratification with Magnetic Resonance Imaging-Derived Biomarkers
PTDC/MEC-NUC/6013/2020
Researcher
Coimbra Institute of Biomedical Imagind and Translational Research (CIBIT), Portugal
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra
Ongoing
2018/07 - 2021/07 Diet4Cognition - Cognitive enhancement in aged brain and vascular dementia in humans through improving neurovascular coupling: a mechanism based approach driven by nitrite and ascorbic acid from diet
Researcher
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2018/07 - 2021/07 BrEin-MS - Brain Elasticity in Multiple Sclerosis and implications in mechanomodulation of oligodendrocytes: a cellular and clinical approach
Researcher
Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal

CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2018/06 - 2021/06 BIOMUSCLE - Novel multimodal imaging biomarkers of neuronal connectivity in Multiple Sclerosis (PI)
Principal investigator
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

Centro Hospitalar e Universitário de Coimbra EPE, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2017/02 - 2021/01 BIGDATIMAGE - From computational modelling and clinical research to the development of neuroimaging big data platforms for discovery of novel biomarkers
CENTRO-01-0145-FEDER-000016
Researcher
Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

IBILI - Faculty of Medicine, University of Coimbra , Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2017/02 - 2020/01 MEDPERSYST - Synaptic networks and Personalized Medicine Approaches to Understand Neurobehavioural Diseases Across the Lifespan
Researcher
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2017/11 - 2019/10 The role of motion adaptation in bottom-up mechanisms of perceptual decision-making
PT/FB/BL-2016-207
Researcher
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação Bial
Concluded
2016/11 - 2019/04 Functional neuroimaging in newborns with perinatal asphyxia predicting neurodevelopmental outcome
PTDC/DTP-PIC/6032/2014
Post-doc Fellow
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Centro Hospitalar e Universitário de Coimbra EPE, Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2018/07 - 2018/07 Affective disorders: biomarkers and early detection
Researcher
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2013/02 - 2018/01 BRAINTRAIN - Taking imaging into the therapeutic domain: Self-regulation of brain systems for mental disorders
Collaborator
Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

IBILI - Faculty of Medicine, University of Coimbra , Portugal
European Commission Seventh Framework Programme for Research and Technological Development
Concluded
2016/03 - 2016/10 Multimodal mapping of visual motion perceptual decision: Dissecting the role of different motion integration areas in visual surface reconstruction
PT/FB/BL-2014-373
Research Fellow
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação Bial
Concluded
2013/11 - 2016/01 A direct test of the binding by synchrony hypothesis in humans: the neural correlates of coherent object perception
Bial Grants 2012 - 132/12
Researcher
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação Bial
Concluded
2015/07 - 2015/12 Trabalho multidisciplinar no âmbito de construção de bases de dados, classificação estatística dos dados em doenças de neurodesenvolvimento do cérebro
Research Fellow
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2013/01 - 2015/12 From molecules to man: novel diagnostic imaging tools in neurological and psychiatric disorders
Researcher
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2012/01 - 2015/12 DIAMARKER: Genetic susceptibility of multisystemic complications of diabetes type 2: novel biomarkers for diagnosis and monitoring of therapy
QREN DoIT, Nr 13853 - PPS 2
Researcher
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

Centro Hospitalar e Universitário de Coimbra EPE, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2012/05 - 2015/09 Mechanisms of neuronal inhibition on Neurofibromatosis Type I: a translation model for understanding mechanisms of disease
Researcher
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2009/09 - 2011/06 Mechanisms of neurosensorial inhibition associated with the cognitive deficits in Neurofibromatosis type 1: psychophysics, neurophysiology and functional and structural neuroimaging
PIC/IC/83155/2007
Research Fellow
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
Outputs

Publications

Conference abstract
  1. Côrtes, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "The neural correlates of competition between visual adaptation and persistence in biological motion perception: a psychophysical and fMRI study". Paper presented in Meeting of the Association for Research in Vision and Ophthalmology - ARVO 2023, New Orleans, 2023.
    Accepted
  2. Sousa, Teresa; Sayal, Alexandre; Duarte, João V; Costa, Gabriel N; Castelo-Branco, Miguel. "Adaptation increases neural responses through a reciprocal inhibition circuit in human MT+/V5 leading to changes in perceptual decision". Paper presented in 17º Encontro Nacional da Associação Portuguesa de Psicologia Experimental - APPE 2023, Lisbon, 2023.
    Accepted
  3. Côrtes, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "Perceptual hysteresis in emotion recognition from biological motion: a happiness bias effect". Paper presented in 17º Encontro Nacional da Associação Portuguesa de Psicologia Experimental - APPE 2023, Lisbon, 2023.
    Accepted
  4. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Duarte, Isabel Catarina; Moreno, Carolina; Ribeiro, Mário; Oliveira, Francisco; Castelo-Branco, Miguel. "Impaired brain responses in hippocampus and memory circuit in type 2 diabetes without cognitive impairment". Paper presented in IV Congresso Internacional do Centro de Investigação em Neuropsicologia e Intervenção Cognitivo Comportamental - CINEICC 2023, Coimbra, 2023.
    Accepted
  5. Crisóstomo, Joana; Duarte, João V; Canário, Nádia; Moreno, Carolina; Gomes, Leonor; Castelo-Branco, Miguel. "Alterações volumétricas do hipotálamo na diabetes tipo 2 - estudo imagiológico em humanos". Paper presented in 19th Portuguese Meeting of Diabetes, Sociedade Portuguesa de Diabetologia – SPD 2023, Vilamoura, 2023.
    Accepted
  6. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Duarte, Isabel Catarina; Moreno, Carolina; Ribeiro, Mário; Caramelo, Beatriz; et al. "Alterações na resposta cerebral no hipocampo e circuito de memória na diabetes tipo 2 sem comprometimento cognitivo". Paper presented in 19th Portuguese Meeting of Diabetes, Sociedade Portuguesa de Diabetologia – SPD 2023, Vilamoura, 2023.
    Accepted
  7. Côrtes, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "Emotion recognition in dynamic biological motion patterns shows right hemispheric lateralization". Paper presented in 29th Annual Meeting of the Organization for Human Brain Mapping - OHBM 2023, Montréal, 2023.
    Accepted
  8. Silva, Heloisa Barbosa; Terra, Carolina; Caetano Oliveira, Rui; Santos, Eva; Tralhão, José; Donato, Paulo; Castelo-Branco, Miguel; et al. "Biomarcadores de Imagem por Ressonância Magnética nas Metástases Hepáticas: Aplicações de machine learning". Paper presented in XLIII Portuguese Meeting of Surgery, Sociedade Portuguesa de Cirurgia - SPCIR 2023, Estoril, 2023.
    Accepted
  9. Duarte, João¿Valente; Soares, Júlia F; Abreu, Rodolfo; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia ; Castelo-Branco, Miguel. Corresponding author: Duarte, João¿Valente. "Functional connectivity biomarkers in early Multiple Sclerosis measured with simultaneous EEG-fMRI". Paper presented in 28th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Glasgow, 2022.
    Published
  10. Júlia Freire Soares; Abreu, Rodolfo; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia ; Castelo-Branco, Miguel; Duarte, João¿Valente. "Comparison of motion correction strategies for task-fMRI studies in Multiple Sclerosis". Paper presented in Federation of European Neuroscience Societies (FENS) Forum, Paris, 2022.
    Accepted
  11. David Alves Berhanu; Duarte, João¿Valente; Batista, Sónia ; Ana Cláudia Lima; Lívia Diogo Sousa; Castelo-Branco, Miguel; Pereira, Daniela Jardim. "Artificial Intelligence in Multiple Sclerosis: Does Automated Lesion Segmentation Help?". Paper presented in GEEM Spring Meeting, Peniche, 2022.
    Accepted
  12. Duarte, João¿Valente; Abreu, Rodolfo; Castelo-Branco, Miguel. "Representational similarity analysis of neural processing of global and local biological motion". Paper presented in International Conference for Cognitive Neuroscience (ICON), Helsinki, 2022.
    Accepted
  13. Maria Caranova; Júlia Freire Soares; Ana Cláudia Lima; Lívia Diogo Sousa; Castelo-Branco, Miguel; Sónia Batista; Duarte, João¿Valente. "Probing brain microstructural connectivity in patients with early Multiple Sclerosis using diffusion weighted MRI". Paper presented in 38th Congress of European Committee for Treatment and Research in Multiple Sclerosis - ECTRIMS 2022, Amsterdam, 2022.
    Published
  14. Júlia Freire Soares; Ana Cláudia Lima; Lívia Diogo Sousa; Sónia Batista; Castelo-Branco, Miguel; Duarte, João¿Valente. "Comparing scrubbing and interpolation of motion spikes in task-fMRI". Paper presented in ISMRM Iberian Chapter Annual Meeting 2022, Lisbon, 2022.
    Published
  15. David Alves Berhanu; Inês Carneiro; Castelo-Branco, Miguel; Sónia Batista; Daniela Jardim Pereira; Duarte, João¿Valente. "Clinical Application of Artificial Intelligence in Multiple Sclerosis - Does Automated Lesion Segmentation Help?". Paper presented in 45th Annual Meeting of the European Society of Neuroradiology – ESNR 2022, Lisbon, 2022.
    Published
  16. Silva, Heloisa Barbosa; Terra, Carolina; Caetano Oliveira, Rui; Santos, Eva; Tralhão, José; Donato, Paulo; Castelo-Branco, Miguel; et al. "Magnetic resonance imaging biomarkers in liver metastases: machine learning applications". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, Coimbra, 2022.
    Accepted
  17. Sayal, Alexandre; Sousa, Teresa; Direito, Bruno; Duarte, João V; Castelo-Branco, Miguel. "Measuring effective connectivity in the visual motion perception network at different temporal resolutions". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, Coimbra, 2022.
    Accepted
  18. Caranova, Maria; Soares, Júlia F; Lima, Ana Cláudia; Sousa, Lívia; Castelo-Branco, Miguel; Batista, Sónia ; Duarte, João V. "Diffusion weighted MRI reveals distinct microstructural properties in different brain tissues of patients with early Multiple Sclerosis". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, Coimbra, 2022.
    Accepted
  19. Soares, Júlia F; Lima, Ana Cláudia; Sousa, Lívia; Batista, Sónia ; Castelo-Branco, Miguel; Duarte, João V. "A systematic comparison of methods for correcting head motion effects in task-fMRI: application in clinical neuroscience". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, Coimbra, 2022.
    Accepted
  20. Abreu, Rodolfo; Miguel Castelo-Branco; Duarte, João V. "The impact of geometric distortions and their correction on fMRI data analyses". Paper presented in Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021, 2021.
    Published
  21. Abreu, Rodolfo; Júlia F Soares; Sónia Batista; Lívia Diogo Sousa; Miguel Castelo Branco; Duarte, João V. "Optimizing EEG source reconstruction with concurrent fMRI-derived spatial priors". Paper presented in Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021, 2021.
    Published
  22. Campos, Alexandre Sayal; Rodolfo Abreu; Teresa Sousa; Duarte, João V; Bruno Direito; Miguel Castelo-Branco. "Undistort your brain - an evaluation of susceptibility artifact correction methods across (repetition) time". Paper presented in Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021 – Iberian Chapter, 2021.
  23. Duarte, João V; Joana Santos; Abreu, Rodolfo; Júlia F Soares; Sónia Batista; Ana Cláudia Lima; Lívia Diogo Sousa; Miguel Castelo-Branco. "Probing brain effective connectivity in early MS patients with Granger causality analysis of task-fMRI". Paper presented in 37th Congress of European Committee for Treatment and Research in Multiple Sclerosis - ECTRIMS, 2021.
    Published
  24. Júlia Freire Soares; Abreu, Rodolfo; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia ; Castelo-Branco, Miguel; Duarte, João V. Corresponding author: Duarte, João V. "Brain functional connectivity in early Multiple Sclerosis measured with simultaneous EEG-fMRI". Paper presented in XVII Meeting of the Portuguese Society for Neuroscience - SPN 2021, Coimbra, 2021.
  25. Duarte, João V; Joana Santos; Abreu, Rodolfo; Júlia Freire Soares; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia ; Castelo-Branco, Miguel. "Functional Connectivity Biomarkers of Multiple Sclerosis using fMRI during task performance". Paper presented in XVII Meeting of the Portuguese Society for Neuroscience - SPN 2021, Coimbra, 2021.
  26. Duarte, João V; Madeira, Nuno; MARTINS, RICARDO; Costa, Gabriel Nascimento; Macedo, António; Castelo-Branco, Miguel. "Investigating whole-brain MRI markers in neuropsychiatric disorders – separating disease duration from medication effects in schizophrenia and bipolar disorder". Paper presented in XVI Meeting of the Portuguese Society for Neuroscience (SPN 2019), Lisbon, 2019.
    Published • 10.3389/conf.fncel.2019.01.00048
  27. Sousa, Teresa; Sayal, Alexandre; Duarte, João V; Costa, Gabriel Nascimento; MARTINS, RICARDO; Castelo-Branco, Miguel. "Studying the neuronal mechanisms underlying bistable perception: the role of adaptation, persistence, and inhibition on perceptual decision". Paper presented in XVI Meeting of the Portuguese Society for Neuroscience (SPN 2019), Lisbon, 2019.
    Published • 10.3389/conf.fncel.2019.01.00045
  28. Al-Rawi, Mohammed; Freitas, Adelaide; Duarte, João V; Castelo-Branco, Miguel. "Permutation distributions for pattern classification in neuroimaging". Paper presented in III Luso-Galician Meeting on Biometry, Aveiro, 2018.
    Published
  29. Al-Rawi, Mohammed; Duarte, João¿Valente; Castelo-Branco, Miguel. "hMT/V5 is more affected with age than other brain regions in patients with Type II Diabetes". Paper presented in 53rd Meeting of the European Association for the Study of Diabetes (EASD), Lisboa, 2017.
    Published • 10.1007/s00125-017-4350-z
  30. Duarte, João V. "Latency time variability hinders ASL fMRI analyses". Paper presented in Joint Annual Meeting ISMRM-ESMRMB 2014, 2014.
    Published
  31. Duarte, João V; Raimundo, Miguel; Castelo-Branco, Miguel. "Parametric fMRI activation of cortical regions during visual speed discrimination in healthy and diabetic patients". Paper presented in European Conference on Visual Perception, Bremen, Germany, 2013.
    Published • 10.1068/v130724
  32. Duarte, João V. "Abnormally high amplitude of brain oscillations in a neurodevelopmental disorder characterized by enhanced GABAergic transmission: Neurofibromatosis type 1". Paper presented in 17th Conference of the Federation of European Neuroscience Societies (FENS), 2010.
    Published
Conference paper
  1. Soares, Júlia; Abreu, Rodolfo; Lima, Ana; Batista, Sónia; Sousa, Lívia; Castelo-Branco, Miguel; Duarte, João. "On the Optimal Strategy for Tackling Head Motion in fMRI Data". Paper presented in International Conference on Bio-inspired Systems and Signal Processing – BIOSIGNALS 2021, 2021.
    Published • 10.5220/0010327803060313
  2. Soares, Júlia; Sousa, Teresa; d’Almeida, Otília C.; Batista, Sónia; Sousa, Lívia; Castelo-Branco, Miguel; Duarte, João¿Valente. "Investigating Whole-Brain MRI Markers in Multiple Sclerosis - Emerging Dimensions in Morphometric Space". Paper presented in XV Mediterranean Conference on Medical and Biological Engineering and Computing - MEDICON 2019, Coimbra, 2019.
    Published • 10.1007/978-3-030-31635-8_202
  3. Al-Rawi, Mohammed S.; Freitas, Adelaide; Duarte, Joao V.; Branco, Miguel Castelo. "Permutation distributions of fMRI classification do not behave in accord with central limit theorem". Paper presented in 2014 International Workshop on Pattern Recognition in Neuroimaging (PRNI), Tubingen, Germany, 2014.
    Published • 10.1109/prni.2014.6858506
  4. Direito, Bruno; Duarte, João V; Teixeira, César; Schelter, Bjoern; Le Van Quyen, Michel; Schulze-Bonhage, Andreas; Sales, Francisco; Dourado, António. "Feature Selection in High Dimensional EEG Feature Spaces for Epileptic Seizure Prediction". Paper presented in 18th International Federation of Automatic Control (IFAC) World Congress, Milan, 2011.
    Published • 10.3182/20110828-6-IT-1002.03331
  5. Duarte, Joao; Ribeiro, Maria; Violante, Ines; Cunha, Gil; Al-Rawi, M.; Cunha, J. P.; Castelo-Branco, Miguel. "Multivariate pattern analysis of brain structure: A diagnostic tool for Neurofibromatosis type 1". Paper presented in 1st Portuguese Meeting in Bioengineering, The Challenge of the XXI Century (ENBENG), Lisbon, Portugal, 2011.
    Published • 10.1109/enbeng.2011.6026061
  6. Duarte, João V; Nuzzo, Angelo; Malovini, Alberto; Puca, Annibale A; Bellazzi, Riccardo. "SNP2Net: a tool for gene-based predictive modeling in genome-wide association studies". Paper presented in IDAMAP 2009 Intelligent Data Analysis in bioMedicine and Pharmacology, Verona, 2009.
    Published
  7. Dourado, António; Martins, Ricardo; Duarte, João; Direito, Bruno. "Towards Personalized Neural Networks for Epileptic Seizure Prediction". Paper presented in International Conference on Artificial Neural Networks - ICANN 2008, 2008.
    Published • 10.1007/978-3-540-87559-8_50
Conference poster
  1. Nelson Descalço; Gonçalo Cotovio; Jaime Caballero-Insaurriaga; Ana Maia; Faro Viana, Francisco; Nuno Loução; Duarte, João V; et al. "Neuroanatomy of obsessive-compulsive disorder: from structural lesional connectivity mapping to primary dysfunction". Paper presented in OHBM 2024 - 30th Annual Meeting of the Organization for Human Brain Mapping, 2024.
  2. Descalço, Nelson; Ana Maia; Caballero-Insaurriaga, Jaime; Duarte, João Valente; José Oliveira; Barahona-Corrêa, J Bernardo; Oliveira-Maia, Albino J.. "White matter integrity and peripheral inflammation in obsessive-compulsive disorder". Paper presented in OHBM 2024 - 30th Annual Meeting of the Organization for Human Brain Mapping, 2024.
  3. Duarte, João V. "Neural encoding of calorie content of food: an event-related task fMRI experiment". Paper presented in Champalimaud Research Retreat 2024, 2024.
  4. Caballero-Insaurriaga, Jaime; Duarte, João V. "Characterizing the physiological postingestive brain response to caloric content in humans with fMRI". Paper presented in Champalimaud Research Retreat 2024, 2024.
  5. Crisóstomo, Joana; Duarte, João V. "Testing the effects of post-ingestive stimulation on dopamine release: a PET study". Paper presented in Champalimaud Research Retreat 2024, 2024.
  6. Matilde Silva; Duarte, João V. "Brain structural changes associated with the presence of Resting Tremor in Parkinson’s Disease". Paper presented in Champalimaud Research Retreat 2024, 2024.
  7. Ana Maria Fonseca; Duarte, João V. "An fMRI study of the effects of chemotherapy on resting state functional connectivity in women with breast cancer". Paper presented in Champalimaud Research Retreat 2024, 2024.
  8. Maria João Susano; Faro Viana, Francisco; Duarte, João V. "Exploration of baseline brain connectivity patterns and the development of postoperative delirium". Paper presented in Champalimaud Research Retreat 2024, 2024.
  9. Elena Zamfir; Duarte, João V. "Development of a Reinforcement Learning task for investigating post-ingestive reinforcement in humans". 2024.
  10. Diogo Soares Melo; Duarte, João V. "Trial-by-trial expression of flavour preference in humans: a reinforcement learning study". 2024.
  11. Diogo Soares Melo; Faro Viana, Francisco; Mendes, L. Filipe; Duarte, João V; Jaime Caballero-Insaurriaga; Elena Zamfir; Oliveira-Maia, Albino J.. "Development of a tastant delivery system for feeding behaviour experiments". Paper presented in 9th European Students Conference on Behaviour & Cognition, 2023.
  12. Cortês, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "Emotion recognition in dynamic biological motion patterns shows right hemispheric lateralization". 2023.
  13. Duarte, João V; MARTINS, RICARDO; Madeira, Nuno; Kymberly Young; Macedo, António; Castelo-Branco, Miguel. "A structural MRI study of cortical complexity features of major depression, schizophrenia, and bipolar disorder". Paper presented in Federation of European Neuroscience Societies Regional Meeting (FENS - FRM), 2023.
  14. Côrtes, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "The neural correlates of competition between visual adaptation and persistence in biological motion perception: a psychophysical and fMRI study". Paper presented in Meeting of the Association for Research in Vision and Ophthalmology - ARVO 2023, 2023.
  15. Sousa, Teresa; Sayal, Alexandre; Duarte, João V; Costa, Gabriel N; Castelo-Branco, Miguel. "Adaptation increases neural responses through a reciprocal inhibition circuit in human MT+/V5 leading to changes in perceptual decision". Paper presented in 17º Encontro Nacional da Associação Portuguesa de Psicologia Experimental - APPE 2023, 2023.
  16. Côrtes, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "Perceptual hysteresis in emotion recognition from biological motion: a happiness bias effect". Paper presented in 17º Encontro Nacional da Associação Portuguesa de Psicologia Experimental - APPE 2023, 2023.
  17. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Duarte, Isabel Catarina; Moreno, Carolina; Ribeiro, Mário; Oliveira, Francisco; Castelo-Branco, Miguel. "Impaired brain responses in hippocampus and memory circuit in type 2 diabetes without cognitive impairment". Paper presented in IV Congresso Internacional do Centro de Investigação em Neuropsicologia e Intervenção Cognitivo Comportamental - CINEICC 2023, 2023.
  18. Crisóstomo, Joana; Duarte, João V; Canário, Nádia; Moreno, Carolina; Gomes, Leonor; Castelo-Branco, Miguel. "Alterações volumétricas do hipotálamo na diabetes tipo 2 - estudo imagiológico em humanos". Paper presented in 19th Portuguese Meeting of Diabetes, Sociedade Portuguesa de Diabetologia - SPD 2023, 2023.
  19. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Duarte, Isabel Catarina; Moreno, Carolina; Ribeiro, Mário; Caramelo, Beatriz; et al. "Alterações na resposta cerebral no hipocampo e circuito de memória na diabetes tipo 2 sem comprometimento cognitivo". Paper presented in 19th Portuguese Meeting of Diabetes, Sociedade Portuguesa de Diabetologia - SPD 2023, 2023.
  20. Silva, Heloisa Barbosa; Terra, Carolina; Caetano Oliveira, Rui; Santos, Eva; Tralhão, José; Donato, Paulo; Castelo-Branco, Miguel; et al. "Biomarcadores de Imagem por Ressonância Magnética nas Metástases Hepáticas: Aplicações de machine learning". Paper presented in XLIII Portuguese Meeting of Surgery, Sociedade Portuguesa de Cirurgia - SPCIR 2023, 2023.
  21. Nelson Descalço; Gonçalo Cotovio; Francisco Viana; Ana Maia; Jaime Caballero-Insaurriaga; Gabriel Costa; Duarte, João V; et al. "Comparing the use of 2D and 3D brain lesions to generate structural lesional connectivity maps". Paper presented in Champalimaud Research Retreat, 2023.
  22. MARTINS, RICARDO; Duarte, João V; Madeira, Nuno; Macedo, António; Castelo-Branco, Miguel. "Distinct functional connectivity patterns in dopaminergic and limbic pathways underlying task-based implicit theory of mind in schizophrenia and bipolar disorder". 2023.
  23. Cortês, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "Emotion recognition in biological motion: a left lateralization effect when I see you become happy". Paper presented in Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2023, 2023.
  24. F. Soares, Júlia; Caranova, Maria; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia; Castelo-Branco, Miguel; Duarte, João V. "Optimizing cleaning of EEG signal acquired simultaneously with fMRI – A Multiple Sclerosis study". 2023.
  25. Caranova, Maria; F. Soares, Júlia; Castelo-Branco, Miguel; Batista, Sónia; Duarte, João V. "Longitudinal diffusion weighted MRI analysis reveals distinct microstructural properties in pre-lesional tissue of patients with early Multiple Sclerosis". 2023.
  26. Madeira, Nuno; MARTINS, RICARDO; Duarte, João V; Macedo, António; Castelo-Branco, Miguel. "Teoria da Mente implícita na Esquizofrenia e Doença Bipolar: padrões cerebrais distintivos de conetividade funcional em ressonância magnética funcional.". 2023.
  27. Diogo Soares Melo; Faro Viana, Francisco; Mendes, L. Filipe; Duarte, João V; Jaime Caballero-Insaurriaga; Elena Zamfir; Oliveira-Maia, Albino J.. "Development of a system for tastant delivery during feeding behavior experiments". 2023.
  28. Maria João Susano; Faro Viana, Francisco; Gonçalo Cotovio; Duarte, João V; Ruivo, Joana; Oliveira-Maia, Albino J.. "Exploration of baseline brain connectivity patterns and the development of postoperative delirium". 2023.
  29. Costa, Gabriel; Michael Schaum; Duarte, João V; MARTINS, RICARDO; Castelhano, João; Castelo-Branco, Miguel. "Distinct oscillatory patterns differentiate between segregation and integration processes in perceptual grouping". 2023.
  30. Sousa, Teresa; Sayal, Alexandre; Duarte, João V; Costa, Gabriel; Castelo-Branco, Miguel. "Neuronal reciprocal inhibition tracked in the human brain using fMRI". 2023.
  31. Júlia Freire Soares; Abreu, Rodolfo; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia ; Castelo-Branco, Miguel; Duarte, João¿Valente. "Comparison of motion correction strategies for task-fMRI studies in Multiple Sclerosis". Paper presented in Conference of the Federation of European Neuroscience Societies - FENS Forum 2022, 2022.
  32. Duarte, João¿Valente; Júlia Freire Soares; Abreu, Rodolfo; Ana Cláudia Lima; Lívia Diogo Sousa; Batista, Sónia; Castelo-Branco, Miguel. "Functional connectivity biomarkers in early Multiple Sclerosis measured with simultaneous EEG-fMRI". Paper presented in 28th Annual Meeting of the Organization for Human Brain Mapping - OHBM 2022, 2022.
  33. Duarte, João¿Valente; Abreu, Rodolfo; Castelo-Branco, Miguel. "Representational similarity analysis of neural processing of global and local biological motion". Paper presented in International Conference of Cognitive Neuroscience - ICON 2022, 2022.
  34. Miguel Castelo-Branco; Teresa Sousa; Duarte, João¿Valente; Ricardo Filipe Alves Martins; Gabriel Nascimento Costa. "The role of motion adaptation in bottom-up mechanisms of perceptual decision-making". Paper presented in XIII Forum of BIAL Foundation - BIAL 2022, 2022.
  35. Maria Caranova; Júlia Freire Soares; Ana Cláudia Lima; Lívia Diogo Sousa; Castelo-Branco, Miguel; Sónia Batista; Duarte, João¿Valente. "Probing brain microstructural connectivity in patients with early Multiple Sclerosis using diffusion weighted MRI". Paper presented in 38th Congress of European Committee for Treatment and Research in Multiple Sclerosis - ECTRIMS 2022, 2022.
  36. Júlia Freire Soares; Ana Cláudia Lima; Lívia Diogo Sousa; Sónia Batista; Castelo-Branco, Miguel; Duarte, João¿Valente. "Comparing scrubbing and interpolation of motion spikes in task-fMRI". Paper presented in ISMRM Iberian Chapter Annual Meeting 2022, 2022.
  37. David Alves Berhanu; Inês Carneiro; Castelo-Branco, Miguel; Sónia Batista; Daniela Jardim Pereira; Duarte, João¿Valente. "Clinical Application of Artificial Intelligence in Multiple Sclerosis - Does Automated Lesion Segmentation Help?". Paper presented in 45th Annual Meeting of the European Society of Neuroradiology – ESNR 2022, 2022.
  38. Silva, Heloisa Barbosa; Terra, Carolina; Caetano Oliveira, Rui; Santos, Eva; Tralhão, José; Donato, Paulo; Castelo-Branco, Miguel; et al. "Magnetic resonance imaging biomarkers in liver metastases: machine learning applications". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, 2022.
  39. Sayal, Alexandre; Sousa, Teresa; Direito, Bruno; Duarte, João V; Castelo-Branco, Miguel. "Measuring effective connectivity in the visual motion perception network at different temporal resolutions". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, 2022.
  40. Caranova, Maria; Soares, Júlia F; Lima, Ana Cláudia; Sousa, Lívia; Castelo-Branco, Miguel; Batista, Sónia ; Duarte, João V. "Diffusion weighted MRI reveals distinct microstructural properties in different brain tissues of patients with early Multiple Sclerosis". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, 2022.
  41. Soares, Júlia F; Lima, Ana Cláudia; Sousa, Lívia; Batista, Sónia ; Castelo-Branco, Miguel; Duarte, João V. "A systematic comparison of methods for correcting head motion effects in task-fMRI: application in clinical neuroscience". Paper presented in 1st Annual Meeting of the Coimbra Institute for Biomedical Imaging and Translational Research - CIBIT 2022, 2022.
  42. Júlia Freire Soares; Abreu, Rodolfo; Ana Cláudia Lima; Lívia Diogo Sousa; Sónia Batista; Castelo-Branco, Miguel; Duarte, João V. "Brain functional connectivity in early Multiple Sclerosis measured with simultaneous EEG-fMRI". Paper presented in XVII Meeting of the Portuguese Society for Neuroscience - SPN 2021, 2021.
  43. Duarte, João V; Joana Santos; Abreu, Rodolfo; Júlia Freire Soares; Ana Cláudia Lima; Lívia Diogo Sousa; Sónia Batista; Miguel Castelo-Branco. "Functional Connectivity Biomarkers of Multiple Sclerosis using fMRI during task performance". Paper presented in XVII Meeting of the Portuguese Society for Neuroscience - SPN 2021, 2021.
  44. Joana Crisóstomo; Duarte, João V; Nádia Canário; Carolina Moreno; Leonor Gomes; Miguel Castelo-Branco. "O papel da diabetes tipo 2 na curvatura cortical do cérebro: uma avaliação longitudinal". Paper presented in 17th Portuguese Meeting of Diabetes ¿ Sociedade Portuguesa de Diabetologia (SPD), 2021.
  45. Rodolfo Abreu; Miguel Castelo-Branco; Duarte, João V. "The impact of geometric distortions and their correction on fMRI data analyses". Paper presented in Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021, 2021.
  46. Abreu, Rodolfo; Júlia Soares; Sónia Batista; Lívia Diogo Sousa; Miguel Castelo-Branco; Duarte, João V. "Optimizing EEG source reconstruction with concurrent fMRI-derived spatial priors". Paper presented in Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021, 2021.
  47. Campos, Alexandre Sayal; Rodolfo Abreu; Teresa Sousa; Duarte, João V; Bruno Direito; Miguel Castelo-Branco. "Undistort your brain - an evaluation of susceptibility artifact correction methods across (repetition) time". Paper presented in Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021 – Iberian Chapter, 2021.
  48. Duarte, João V; Joana Santos; Rodolfo Abreu; Júlia F Soares; Sónia Batista; Ana Cláudia Lima; Lívia Diogo Sousa; Miguel Castelo-Branco. "Probing brain effective connectivity in early MS patients with Granger causality analysis of task-fMRI". Paper presented in 37th Congress of European Committee for Treatment and Research in Multiple Sclerosis - ECTRIMS, 2021.
  49. Júlia Freire Soares; Abreu, Rodolfo; Ana Cláudia Lima; Sónia Batista; Lívia Diogo Sousa; Miguel Castelo-Branco; Duarte, João V. "On the optimal strategy for tackling head motion in fMRI data". Paper presented in 14th International Conference on Bio-inspired Systems and Signal Processing – BIOSIGNALS 2021, 2021.
  50. Crisóstomo, Joana; Duarte, João V; Moreno, Carolina; Gomes, Leonor; Castelo-Branco, Miguel. "Conhecer melhor o cérebro diabético: espessura e curvatura cortical como biomarcadores de neuroimagem". Paper presented in 16th Portuguese Meeting of Diabetes – Sociedade Portuguesa de Diabetologia (SPD), 2020.
  51. Sousa, Teresa; Campos, Alexandre Sayal; Duarte, João V; Costa, Gabriel Nascimento; MARTINS, RICARDO; Castelo-Branco, Miguel. "Studying the neuronal mechanisms underlying bistable perception: the role of adaptation, persistence, and inhibition on perceptual decision". Paper presented in XVI Meeting of the Portuguese Society for Neuroscience (SPN), 2019.
  52. Duarte, João V; Madeira, Nuno; MARTINS, RICARDO; Costa, Gabriel Nascimento; Macedo, António; Castelo-Branco, Miguel. "Investigating whole-brain MRI markers in neuropsychiatric disorders – separating disease duration from medication effects in schizophrenia and bipolar disorder". Paper presented in XVI Meeting of the Portuguese Society for Neuroscience (SPN), 2019.
  53. Campos, Alexandre Sayal; Sousa, Teresa; Duarte, João V; Costa, Gabriel Nascimento; Castelo-Branco, Miguel. "(Des)inhibition: the side-effect of adaptation in bistable perception". Paper presented in 25th Annual Meeting of the Organization for Human Brain Mapping (OHBM), 2019.
  54. Sousa, Teresa; Campos, Alexandre Sayal; Duarte, João V; Costa, Gabriel Nascimento; Castelo-Branco, Miguel. "Brain responses underlying the interaction between competing perceptual states". Paper presented in Iberian Conference on Perception (ICP), 2019.
  55. Duarte, João V; Madeira, Nuno; MARTINS, RICARDO; Costa, Gabriel Nascimento; Macedo, António; Castelo-Branco, Miguel. "Investigating whole-brain MRI markers in neuropsychiatric disorders – emerging dimensions in morphometric space". Paper presented in European Neuroscience Societies Regional Meeting (FENS – FRM), 2019.
  56. Costa, Gabriel Nascimento; Schaum, M; MARTINS, RICARDO; Duarte, João V; Castelhano, João; Wibral, Michael; Castelo-Branco, Miguel. "Distinct roles of beta and gamma oscillations during integration of ambiguous motion". Paper presented in Federation of European Neuroscience Societies Regional Meeting (FENS – FRM), 2019.
  57. Sousa, Teresa; Campos, Alexandre Sayal; Duarte, João V; Costa, Gabriel Nascimento; MARTINS, RICARDO; Castelo-Branco, Miguel. "Evidence for asymmetric perceptual adaptation to coherent and incoherent moving plaids". Paper presented in 24th Annual Meeting of the Organization for Human Brain Mapping (OHBM), 2018.
  58. Campos, Alexandre Sayal; Sousa, Teresa; Duarte, João V; Costa, Gabriel Nascimento; MARTINS, RICARDO; Castelo-Branco, Miguel. "Unraveling the neural correlates of perceptual hysteresis: the effects of perceptual history on the visual perception of an ambiguous stimulus". Paper presented in 11th Conference of the Federation of European Neuroscience Societies (FENS), 2018.
  59. Sousa, Teresa; Campos, Alexandre Sayal; Duarte, João V; Costa, Gabriel Nascimento; MARTINS, RICARDO; Castelo-Branco, Miguel. "Distinct levels of visual adaptation due to coherent and incoherent motion perception". Paper presented in 2nd Salzburg Mind-Brain Annual Meeting (SAMBA), 2018.
  60. Campos, Alexandre Sayal; Sousa, Teresa; Duarte, João V; Costa, Gabriel Nascimento; MARTINS, RICARDO; Castelo-Branco, Miguel. "Studying the effects of perceptual history on deciding between percepts of ambiguous moving plaids". Paper presented in 2nd Salzburg Mind-Brain Annual Meeting (SAMBA), 2018.
  61. Duarte, João V; Pinto, Carla; Duarte, Isabel Catarina; Castelhano, João; Oliveira, Guiomar; Castelo-Branco, Miguel. "Functional neuroimaging in newborns with perinatal asphyxia - evidence for differential changes in visual, auditory and motor responses". Paper presented in 2nd Salzburg Mind-Brain Annual Meeting (SAMBA), 2018.
  62. Duarte, João V; Aragão, Bruno; Santos, Jorge A; Castelo-Branco, Miguel. "Human MT+ is sensitive to the dynamics of motion of a single dot representing or violating the biological motion of real human walkers". Paper presented in Annual Meeting of the Society for Neuroscience (SfN), 2018.
  63. Duarte, João V; Costa, Gabriel N; Martins, Ricardo; Castelo-Branco, Miguel. "Long-range interhemispheric binding of bistable surface motion reflects bottom-up processes generated within hMT+". Paper presented in 13th International Conference for Cognitive Neuroscience (ICON), 2017.
  64. Sousa, Teresa; Duarte, João V; Costa, Gabriel N; Kemper, Valentin G; Martins, Ricardo; Goebel, Rainer; Castelo-Branco, Miguel. "The Perceptual Integration of Visual Motion Revealed by hMT+ Interhemispheric Connectivity: a 7 Tesla study". Paper presented in 13th International Conference for Cognitive Neuroscience (ICON), 2017.
  65. Costa, Gabriel N; Duarte, João V; Martins, Ricardo; Castelo-Branco, Miguel. "Beta oscillations reflect perceptual experience under ambiguous stimulation but not in the absence of conflict". Paper presented in 13th International Conference for Cognitive Neuroscience (ICON), 2017.
  66. Al-Rawi, Mohammed; Duarte, João V; Castelo-Branco, Miguel. "hMT/V5 is more affected with age than other brain regions in patients with Type II Diabetes". Paper presented in 53rd EASD Meeting (European Association for the Study of Diabetes), 2017.
  67. Sousa, Teresa; Kemper, Valentin G; Costa, Gabriel N; Duarte, João V; Martins, Ricardo; Goebel, Rainer; Castelo-Branco, Miguel. "Long-range perceptual integration of visual motion revealed at high resolution 7T fMRI". Paper presented in 22nd Annual Meeting of the Organization for Human Brain Mapping, 2016.
  68. Costa, Gabriel N; Duarte, João V; Martins, Ricardo; Castelo-Branco, Miguel. "Binding of ambiguous visual stimuli is associated with changes in beta power but not with synchrony". Paper presented in 22nd Annual Meeting of the Organization for Human Brain Mapping, 2016.
  69. Intaitè, Monika; Duarte, João V; Castelo-Branco, Miguel. "Working memory load influences perceptual ambiguity by competing for fronto-parietal attentional resources". Paper presented in FENS-Hertie Winter School, 2016.
  70. Al-Rawi, Mohammed; Duarte, João V; Castelo-Branco, Miguel. "Type II diabetes mellitus drives complications to brain function". Paper presented in The Association for Research in Vision and Ophthalmology (ARVO) Conference - Diabetic Retinopathy: Battling the Global Epidemic, 2015.
  71. Costa, Gabriel N; Duarte, João V; Martins, Ricardo; Madeira, Nuno; Castelo-Branco, Miguel. "Increased synchrony correlates with visual binding: a study on visual integration on healthy subjects and schizophrenic patients". Paper presented in Annual Conference on Clinical Neurophysiology and Neuroimaging, 2015.
  72. Sousa, Teresa; Costa, Gabriel N; Duarte, João V; Martins, Ricardo; Kemper, Valentin G; Goebel, Rainer; Castelo-Branco, Miguel. "Perceptual content of visual motion revealed at 7T fMRI". Paper presented in 7th Annual Meeting of IBILI, 2015.
  73. Pereira, João M S; Duarte, João V; Raimundo, Miguel; Castelo-Branco, Miguel. "Latency time variability hinders ASL fMRI analyses". Paper presented in Joint Annual Meeting ISMRM-ESMRMB, 2014.
  74. Costa, Gabriel N; Duarte, João V; Intaitè, Monika; Castelo-Branco, Miguel. "Perceptual motion integration correlates with long-range neural synchrony: a study on the temporal binding hypothesis". Paper presented in 6th Annual Meeting of IBILI, 2014.
  75. Ferreira, Fábio; Pereira, João M S; Duarte, João V; Castelo-Branco, Miguel. "Methods for multivariate analyses in neuroimaging". Paper presented in 6th Annual Meeting of IBILI, 2014.
  76. Duarte, João V; Raimundo, Miguel; Castelo-Branco, Miguel. "The hemodynamic response function in type 2 diabetes". Paper presented in 5th Annual Meeting of the IBILI, 2013.
  77. Duarte, João V; Raimundo, Miguel; Castelo-Branco, Miguel. "Parametric fMRI activation of cortical regions during visual speed discrimination in healthy and diabetic patients". Paper presented in 42nd European Conference on Visual Perception (ECVP), 2013.
  78. Duarte, João V; Raimundo, Miguel; Castelo-Branco, Miguel. "Cortical responses during parametric visual speed discrimination in healthy and diabetic patients". Paper presented in XIII Meeting of the Portuguese Society for Neuroscience, 2013.
  79. Al-Rawi, Mohammed; Freitas, Adelaide; Duarte, João V; Cunha, João Paulo; Castelo-Branco, Miguel. "On the accordance of permutation distributions of fMRI classification with central limit theorem". Paper presented in 5th Annual Meeting of IBILI, 2013.
  80. Costa, Gabriel N; Duarte, João V; Intaitè, Monika; Castelo-Branco, Miguel. "Interhemispheric synchrony in the beta band correlates with unified perception of moving stimuli". Paper presented in 5th Annual Meeting of IBILI, 2013.
  81. Duarte, João V; Raimundo, Miguel; Castelo-Branco, Miguel. "Sensorial and perceptual speed discrimination: an fMRI study". Paper presented in 4th Annual Meeting of the IBILI, 2012.
  82. Duarte, João V; Ribeiro, Maria J; Violante, Inês R; Cunha, Gil; Silva, Eduardo; Castelo-Branco, Miguel. "Multivariate pattern analysis of multi-site brain structural data in Neurofibromatosis type 1". Paper presented in 3rd Annual Meeting of the IBILI, 2011.
  83. Duarte, João V; Ribeiro, Maria J; Violante, Inês R; Cunha, Gil; Silva, Eduardo; Castelo-Branco, Miguel. "Subtle and disease specific structural patterns in human Neurofibromatosis type 1 confirm findings from the animal model". Paper presented in 8th IBRO World Congress of Neuroscience, 2011.
  84. Ribeiro, Maria J; Violante, Inês R; Duarte, João V; Bernardino, Inês; Cunha, Gil; Ramos, Fabiana; Saraiva, Jorge; Silva, Eduardo; Castelo-Branco, Miguel. "Functional and structural deficits in Neurofibromatosis type 1, a neurodevelopmental disorder characterized by enhanced neural inhibition". Paper presented in XII Meeting of the Portuguese Society for Neuroscience, 2011.
  85. Duarte, João V; Ribeiro, Maria J; Violante, Inês R; Al-Rawi, Mohammed; Cunha, João Paulo; Castelo-Branco, Miguel. "Brain structural patterns as diagnostic tools in Neurofibromatosis type 1: a multivariate statistical approach". Paper presented in VII Seminar of the Pediatric Society of Neurodevelopment, 2011.
  86. Duarte, João V; Ribeiro, Maria J; Lori, Nicolas; Lourenço, Frederico; Castelo-Branco, Miguel. "Support vector machine-based classification of Neurofibromatosis type 1 from structural MR scans". Paper presented in 16th Annual Meeting of the Organization for Human Brain Mapping, 2010.
  87. Duarte, João V; Ribeiro, Maria J; Al-Rawi, Mohammed; Violante, Inês R; Martins, Mafalda; Cunha, João Paulo; Castelo-Branco, Miguel. "Automatic classification of T1-weighted MR scans in Neurofibromatosis type 1". Paper presented in 14th Meeting of the European Neurofibromatosis Association, 2010.
  88. Duarte, João V; Ribeiro, Maria J; Violante, Inês R; Al-Rawi, Mohammed; Cunha, João Paulo; Castelo-Branco, Miguel. "Machine learning and multivariate pattern recognition techniques identify multiple brain areas of abnormal structure in Neurofibromatosis type 1". Paper presented in 2nd Annual Meeting of the IBILI, 2010.
  89. Ribeiro, Maria J; d'Almeida, Otília C; Duarte, João V; Castelo-Branco, Miguel. "Abnormally high amplitude of brain oscillations in a neurodevelopmental disorder characterized by enhanced GABAergic transmission: Neurofibromatosis type 1". Paper presented in 7th Conference of the Federation of European Neuroscience Societies (FENS), 2010.
  90. Dourado, António; Martins, Ricardo; Duarte, João V; Direito, Bruno. "Towards personalized neural networks for epileptic seizure prediction". Paper presented in International Conference on Artificial Neural Networks (ICANN), 2008.
Journal article
  1. Costa, Gabriel Nascimento; Schaum, Michael; Duarte, João V; Martins, Ricardo; Duarte, Isabel Catarina; Castelhano, João; Wibral, Michael; Castelo-Branco, Miguel. "Distinct oscillatory patterns differentiate between segregation and integration processes in perceptual grouping". Human Brain Mapping 45 12 (2024): http://dx.doi.org/10.1002/hbm.26779.
    Open access • Published • 10.1002/hbm.26779
  2. Canário, Nádia S.; Crisóstomo, Joana; Moreno, Carolina; Duarte, João V; Duarte, Isabel C.; Ribeiro, Mário J.; Caramelo, Beatriz; et al. "Functional reorganization of memory processing in the hippocampus is associated with neuroprotector GLP-1 levels in type 2 diabetes". Heliyon (2024): e27412. http://dx.doi.org/10.1016/j.heliyon.2024.e27412.
    Published • 10.1016/j.heliyon.2024.e27412
  3. Marques, Cristiana C.; Sayal, Alexandre; Crisóstomo, Joana; Duarte, João V; Castilho, Paula; Goss, Kenneth; Pereira, Ana T.; Castelo-Branco, Miguel. "A neural network underlying cognitive strategies related to eating, weight and body image concerns". Frontiers in Human Neuroscience 17 (2024): http://dx.doi.org/10.3389/fnhum.2023.1274817.
    Published • 10.3389/fnhum.2023.1274817
  4. Guimarães, Pedro; Serranho, Pedro; Duarte, João V; Crisóstomo, Joana; Moreno, Carolina; Gomes, Leonor; Bernardes, Rui; Castelo-Branco, Miguel. "The hemodynamic response function as a type 2 diabetes biomarker: a data-driven approach". Frontiers in Neuroinformatics 17 (2024): http://dx.doi.org/10.3389/fninf.2023.1321178.
    Published • 10.3389/fninf.2023.1321178
  5. Sousa, Teresa; Sayal, Alexandre; Duarte, João V; Costa, Gabriel N.; Castelo-Branco, Miguel. "A human cortical adaptive mutual inhibition circuit underlying competition for perceptual decision and repetition suppression reversal". NeuroImage 285 (2024): 120488. http://dx.doi.org/10.1016/j.neuroimage.2023.120488.
    Published • 10.1016/j.neuroimage.2023.120488
  6. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Moreno, Carolina; Quental, Hugo; Gomes, Leonor; Oliveira, Francisco P.; Castelo-Branco, Miguel. "Irreversible atrophy in memory brain regions over 7 years is predicted by glycemic control in type 2 diabetes without mild cognitive impairment". Frontiers in Aging Neuroscience (2024): doi: 10.3389/fnagi.2024.1367563.
    Open access • Published
  7. Caranova, Maria; Soares, Júlia F.; Batista, Sónia; Castelo-Branco, Miguel; Duarte, João V. "A systematic review of microstructural abnormalities in multiple sclerosis detected with NODDI and DTI models of diffusion-weighted magnetic resonance imaging". Magnetic Resonance Imaging 104 (2023): 61-71. http://dx.doi.org/10.1016/j.mri.2023.09.010.
    Published • 10.1016/j.mri.2023.09.010
  8. Cortês, Ana Borges; Duarte, João V; Castelo-Branco, Miguel. "Hysteresis reveals a happiness bias effect in dynamic emotion recognition from ambiguous biological motion". Journal of Vision 23 13 (2023): 5. http://dx.doi.org/10.1167/jov.23.13.5.
    Published • 10.1167/jov.23.13.5
  9. Crisóstomo, Joana; Duarte, João V; Canário, Nádia; Moreno, Carolina; Gomes, Leonor; Castelo-Branco, Miguel. "The longitudinal impact of type 2 diabetes on brain gyrification". European Journal of Neuroscience 58 11 (2023): 4384-4392. http://dx.doi.org/10.1111/ejn.16177.
    Published • 10.1111/ejn.16177
  10. Pinto, Carla R.; Duarte, João V; Dinis, Alexandra; Duarte, Isabel C.; Castelhano, João; Pinto, Joana; Oliveira, Guiomar; Castelo-Branco, Miguel. "Functional neuroimaging of responses to multiple sensory stimulations in newborns with perinatal asphyxia". Translational Pediatrics 12 9 (2023): 1646-1658. http://dx.doi.org/10.21037/tp-23-135.
    Published • 10.21037/tp-23-135
  11. Pinto, Diogo; Martins, Ricardo; Macedo, António; Castelo Branco, Miguel; Duarte, João V; Madeira, Nuno. "Brain Hemispheric Asymmetry in Schizophrenia and Bipolar Disorder". Journal of Clinical Medicine 12 10 (2023): 3421. http://dx.doi.org/10.3390/jcm12103421.
    Open access • Published • 10.3390/jcm12103421
  12. Duarte, João Valente; Vieira, Sandra; Madeira, Nuno. "Editorial: Neuroimaging in early intervention in psychiatry". Frontiers in Psychiatry 14 (2023): http://dx.doi.org/10.3389/fpsyt.2023.1196886.
    Open access • Published • 10.3389/fpsyt.2023.1196886
  13. Duarte, João V; Guerra, Catarina; Moreno, Carolina; Gomes, Leonor; Castelo-Branco, Miguel. "Changes in hemodynamic response function components reveal specific changes in neurovascular coupling in type 2 diabetes". Frontiers in Physiology 13 (2023): http://dx.doi.org/10.3389/fphys.2022.1101470.
    Open access • Published • 10.3389/fphys.2022.1101470
  14. Pinto, Carla R.; Duarte, João V; Marques, Carla; Vicente, Inês N.; Paiva, Catarina; Éloi, João; Pereira, Daniela J.; et al. "The role of early functional neuroimaging in predicting neurodevelopmental outcomes in neonatal encephalopathy". European Journal of Pediatrics (2023): http://dx.doi.org/10.1007/s00431-022-04778-0.
    Open access • Published • 10.1007/s00431-022-04778-0
  15. Soares, Júlia F.; Abreu, Rodolfo; Lima, Ana Cláudia; Sousa, Lívia; Batista, Sónia; Castelo-Branco, Miguel; Duarte, João V. "Task-based functional MRI challenges in clinical neuroscience: Choice of the best head motion correction approach in multiple sclerosis". Frontiers in Neuroscience 16 (2022): http://dx.doi.org/10.3389/fnins.2022.1017211.
    Open access • Published • 10.3389/fnins.2022.1017211
  16. Duarte, João Valente; Abreu, Rodolfo; Castelo-Branco, Miguel. "A two-stage framework for neural processing of biological motion". NeuroImage 259 (2022): 119403. https://www.sciencedirect.com/science/article/pii/S1053811922005201?via%3Dihub.
    Open access • Published • 10.1016/j.neuroimage.2022.119403
  17. Dias, Maria de Fátima; de Carvalho, Paulo; Duarte, João Valente; Castelo-Branco, Miguel. "Deformation Fields: A new source of information to predict Brain Age". Journal of Neural Engineering (2022): http://dx.doi.org/10.1088/1741-2552/ac7003.
    Published • 10.1088/1741-2552/ac7003
  18. Rodolfo Abreu; Júlia F. Soares; Ana Cláudia Lima; Lívia Sousa; Sónia Batista; Miguel Castelo-Branco; João Valente Duarte. Corresponding author: João Valente Duarte. "Optimizing EEG Source Reconstruction with Concurrent fMRI-Derived Spatial Priors". Brain Topography (2022): https://doi.org/10.1007/s10548-022-00891-3.
    Open access • Published • 10.1007/s10548-022-00891-3
  19. Oliveira Miranda, Catarina; Rui Jorge Nobre; Vítor Hugo Paiva; Duarte, João¿Valente; Castelhano, João; Lorena Petrella; Sereno, José Vitor Oliveira; et al. "Cerebellar morphometric and spectroscopic biomarkers for Machado-Joseph Disease". Acta Neuropathologica Communications (2022):
    Open access • Published • 10.1186/s40478-022-01329-4
  20. Dias, Maria de Fátima Machado; Carvalho, Paulo; Castelo-Branco, Miguel; Duarte, João V. "Cortical thickness in brain imaging studies using FreeSurfer and CAT12: A matter of reproducibility". Neuroimage: Reports 2 4 (2022): 100137. http://dx.doi.org/10.1016/j.ynirp.2022.100137.
    Open access • Published • 10.1016/j.ynirp.2022.100137
  21. Sousa, Teresa; Duarte, João V.; Costa, Gabriel N.; Kemper, Valentin G.; Martins, Ricardo; Goebel, Rainer; Castelo-Branco, Miguel. "The dual nature of the BOLD signal: Responses in visual area hMT+ reflect both input properties and perceptual decision". Human Brain Mapping (2021): http://dx.doi.org/10.1002/hbm.25339.
    Open access • Published • 10.1002/hbm.25339
  22. Rodolfo Abreu; Duarte, João V. "Quantitative assessment of the impact of geometric distortions and their correction on fMRI data analyses". Frontiers in Neuroscience - Brain Imaging Methods (2021):
    Open access • Published • 10.3389/fnins.2021.642808
  23. Joana Crisóstomo; João V. Duarte; Carolina Moreno; Leonor Gomes; Miguel Castelo-Branco. "A novel morphometric signature of brain alterations in type 2 diabetes: Patterns of changed cortical gyrification". European Journal of Neuroscience 54 (2021): 6322-6333. https://doi.org/10.1111/ejn.15424.
    Open access • Published • 10.1111/ejn.15424
  24. Madeira, Nuno; Martins, Ricardo; Valente Duarte, João; Costa, Gabriel; Macedo, António; Castelo-Branco, Miguel. "A fundamental distinction in early neural processing of implicit social interpretation in schizophrenia and bipolar disorder". NeuroImage: Clinical 32 (2021): 102836. http://dx.doi.org/10.1016/j.nicl.2021.102836.
    Open access • Published • 10.1016/j.nicl.2021.102836
  25. Sayal, Alexandre; Sousa, Teresa; Duarte, João V.; Costa, Gabriel N.; Martins, Ricardo; Castelo-Branco, Miguel. "Identification of competing neural mechanisms underlying positive and negative perceptual hysteresis in the human visual system". NeuroImage 221 (2020): 117153. http://dx.doi.org/10.1016/j.neuroimage.2020.117153.
    Open access • Published • 10.1016/j.neuroimage.2020.117153
  26. Madeira, Nuno; Duarte, João¿Valente; Martins, Ricardo; Costa, Gabriel Nascimento; Macedo, António; Castelo-Branco, Miguel. "Morphometry and gyrification in bipolar disorder and schizophrenia: A comparative MRI study". NeuroImage: Clinical 26 (2020): 102220. http://dx.doi.org/10.1016/j.nicl.2020.102220.
    Open access • Published • 10.1016/j.nicl.2020.102220
  27. Sousa, Teresa; Duarte, João¿Valente; Costa, Gabriel N.; Kemper, Valentin G.; Martins, Ricardo; Goebel, Rainer; Castelo-Branco, Miguel. "Tracking perceptual decision mechanisms through changes in interhemispheric functional connectivity in human visual cortex". Scientific Reports 9 1 (2019): http://dx.doi.org/10.1038/s41598-018-37822-x.
    Open access • Published • 10.1038/s41598-018-37822-x
  28. Sousa, Teresa; Sayal, Alexandre; Duarte, João¿Valente; Costa, Gabriel N.; Martins, Ricardo; Castelo-Branco, Miguel. "Evidence for distinct levels of neural adaptation to both coherent and incoherently moving visual surfaces in visual area hMT+". NeuroImage 179 (2018): 540-547. http://dx.doi.org/10.1016/j.neuroimage.2018.06.075.
    Published • 10.1016/j.neuroimage.2018.06.075
  29. Al-Rawi, Mohammed S; Freitas, Adelaide; Duarte, João V; Cunha, Joao P; Castelo-Branco, Miguel. "Permutations of functional magnetic resonance imaging classification may not be normally distributed". Statistical Methods in Medical Research 26 6 (2017): 2567-2585. http://dx.doi.org/10.1177/0962280215601707.
    Published • 10.1177/0962280215601707
  30. Costa, Gabriel Nascimento; Duarte, João Valente; Martins, Ricardo; Wibral, Michael; Castelo-Branco, Miguel. "Interhemispheric Binding of Ambiguous Visual Motion Is Associated with Changes in Beta Oscillatory Activity but Not with Gamma Range Synchrony". Journal of Cognitive Neuroscience 29 11 (2017): 1829-1844. http://dx.doi.org/10.1162/jocn_a_01158.
    Open access • Published • 10.1162/jocn_a_01158
  31. Ferreira, Fábio S.; Pereira, João M. S.; Reis, Aldina; Sanches, Mafalda; Duarte, João V.; Gomes, Leonor; Moreno, Carolina; Castelo-Branco, Miguel. "Early visual cortical structural changes in diabetic patients without diabetic retinopathy". Graefes Archive for Clinical and Experimental Ophthalmology 255 11 (2017): 2113-2118. http://dx.doi.org/10.1007/s00417-017-3752-4.
    Published • 10.1007/s00417-017-3752-4
  32. Ferreira, Fábio; Pereira, João MS; Duarte, João V; Castelo-Branco, Miguel. "Extending Inferential Group Analysis in Type 2 Diabetic Patients with Multivariate GLM Implemented in SPM8". The Open Neuroimaging Journal 11 1 (2017): 32-45.
    Published • 10.2174/1874440001711010032
  33. Duarte, J.V.; Costa, G.N.; Martins, R.; Castelo-Branco, M.. "Pivotal role of hMT+ in long-range disambiguation of interhemispheric bistable surface motion". Human Brain Mapping 38 10 (2017): 4882-4897. http://www.scopus.com/inward/record.url?eid=2-s2.0-85021404556&partnerID=MN8TOARS.
    10.1002/hbm.23701
  34. Intaite, Monika; Duarte, João Valente; Castelo-Branco, Miguel. "Working memory load influences perceptual ambiguity by competing for fronto-parietal attentional resources". Brain Research 1650 (2016): 142-151. http://dx.doi.org/10.1016/j.brainres.2016.08.044.
    Published • 10.1016/j.brainres.2016.08.044
  35. Duarte, J.V.; Faustino, R.; Lobo, M.; Cunha, G.; Nunes, C.; Ferreira, C.; Januário, C.; Castelo-Branco, M.. "Parametric fMRI of paced motor responses uncovers novel whole-brain imaging biomarkers in spinocerebellar ataxia type 3". Human Brain Mapping 37 10 (2016): 3656-3668. http://www.scopus.com/inward/record.url?eid=2-s2.0-84985930575&partnerID=MN8TOARS.
    10.1002/hbm.23266
  36. Duarte, João V; Pereira, João MS; Quendera, Bruno; Raimundo, Miguel; Moreno, Carolina; Gomes, Leonor; Carrilho, Francisco; Castelo-Branco, Miguel. "Early Disrupted Neurovascular Coupling and Changed Event Level Hemodynamic Response Function in Type 2 Diabetes: An fMRI Study". Journal of Cerebral Blood Flow & Metabolism 35 10 (2015): 1671-1680. http://dx.doi.org/10.1038/jcbfm.2015.106.
    Published • 10.1038/jcbfm.2015.106
  37. Duarte, J.V.; Ribeiro, M.J.; Violante, I.R.; Cunha, G.; Silva, E.; Castelo-Branco, M.. "Multivariate pattern analysis reveals subtle brain anomalies relevant to the cognitive phenotype in neurofibromatosis type 1". Human Brain Mapping 35 1 (2014): 89-106. http://www.scopus.com/inward/record.url?eid=2-s2.0-84889652962&partnerID=MN8TOARS.
    10.1002/hbm.22161
  38. Violante, Inês R.; Ribeiro, Maria J.; Cunha, Gil; Bernardino, Inês; Duarte, João V.; Ramos, Fabiana; Saraiva, Jorge; Silva, Eduardo; Castelo-Branco, Miguel. "Abnormal Brain Activation in Neurofibromatosis Type 1: A Link between Visual Processing and the Default Mode Network". PLoS ONE 7 6 (2012): e38785. http://dx.doi.org/10.1371/journal.pone.0038785.
    Open access • Published • 10.1371/journal.pone.0038785
Preprint
  1. Sayal, Alexandre; Direito, Bruno; Sousa, Teresa; Duarte, João V; Afonso, Sónia; Castelo-Branco, Miguel. "Interhemispheric connectivity during spontaneous switches in visual perceptual coherence as revealed by fMRI at multiple temporal resolutions". 2024. http://dx.doi.org/10.21203/rs.3.rs-4335511/v1.
    10.21203/rs.3.rs-4335511/v1
  2. Sousa, Teresa; Sayal, Alexandre; Duarte, João V; Costa, Gabriel N.; Castelo-Branco, Miguel. "A human cortical adaptive mutual inhibition circuit underlying competition for perceptual decision and repetition suppression reversal". 2023. http://dx.doi.org/10.1101/2023.02.22.529364.
    10.1101/2023.02.22.529364
  3. Canario, Nadia; Crisóstomo, Joana; Duarte, João V; Moreno, Carolina; Quental, Hugo; Gomes, Leonor; Oliveira, Francisco; Castelo-Branco, Miguel. "Irreversible atrophy in memory brain regions over 7 years is predicted by glycemic control in type 2 diabetes without cognitive decline". 2023. http://dx.doi.org/10.21203/rs.3.rs-2689241/v1.
    10.21203/rs.3.rs-2689241/v1
  4. Dias, Maria de Fátima Machado; Cerqueira, Tiago F. T.; Duarte, João V; Castelo-Branco, Miguel; Carvalho, Paulo. "3DCAE-MRI: Overcoming Data Availability in Small Sample Size MRI Studies". 2023. http://dx.doi.org/10.21203/rs.3.rs-3290143/v1.
    10.21203/rs.3.rs-3290143/v1
  5. Soares, Júlia F.; Abreu, Rodolfo; Cláudia Lima, Ana; Sousa, Lívia; Batista, Sónia; Castelo-Branco, Miguel; Duarte, João V. "Task-based fMRI in early Multiple Sclerosis: what is the best head motion correction approach?". 2022. http://dx.doi.org/10.1101/2022.01.31.22270167.
    10.1101/2022.01.31.22270167
  6. Duarte, João V; Abreu, Rodolfo; Castelo-Branco, Miguel. "A two-stage framework for neural processing of biological motion". 2022. http://dx.doi.org/10.1101/2022.03.08.483404.
    10.1101/2022.03.08.483404
  7. Madeira, Nuno Gonçalo Gomes Fernandes; Martins, Ricardo Filipe Alves; Duarte, João V; Costa, Gabriel Nascimento Ferreira; Santos, António João Ferreira Macedo; Castelo-Branco, Miguel Sá Sousa. "A Fundamental Distinction in Early Neural Processing of Implicit Social Interpretation in Schizophrenia and Bipolar Disorder". 2021. http://dx.doi.org/10.1101/2021.03.08.21253057.
    10.1101/2021.03.08.21253057
  8. Abreu, Rodolfo; F. Soares, Júlia; Batista, Sónia; Cláudia Lima, Ana; Sousa, Lívia; Castelo-Branco, Miguel; Duarte, João V. "Optimizing EEG source reconstruction with concurrent fMRI-derived spatial priors". 2021. http://dx.doi.org/10.1101/2021.02.19.431976.
    10.1101/2021.02.19.431976
  9. Crisóstomo, Joana; Duarte, João V; Moreno, Carolina; Gomes, Leonor; Castelo-Branco, Miguel. "A novel morphometric signature of brain alterations in type 2 diabetes: patterns of changed cortical gyrification". 2021. http://dx.doi.org/10.1101/2021.02.25.21252196.
    10.1101/2021.02.25.21252196
Thesis / Dissertation
  1. Duarte, João V. "The role of long-range neural oscillatory synchrony as a mechanism underlying in perceptual coherence". PhD, Faculty of Medicine, University of Coimbra, 2016. http://hdl.handle.net/10316/31083.
  2. Duarte, João V. "Machine learning approaches in genome-wide association studies: SNP2Net: a tool for gene-based predictive modeling". Master, Faculty of Sciences and Technology, University of Coimbra, 2009. http://hdl.handle.net/10316/11377.

Other

Other output
  1. SOFTWARE - SNP2Net: Gene-based predictive modelling in Genome-wide Association Studies. Matlab stand-alone tool for analysis of genetic data with machine learning in the context of hypertension. 2009. Duarte, João¿Valente; Nuzzo, Angelo; Malovini, Alberto; Puca, Annibale A; Bellazzi, Riccardo. http://bioinfo.unipv.it/bioinformatics/software.jsp.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023/07/21 Neuroimaging biomarkers in psychiatry CNC Seminars
(Coimbra, Portugal)
2023/03 Functional magnetic resonance imaging biomarkers in Multiple Sclerosis 1º Congresso Internacional de Radiologia de Coimbra - CIRC 2023
(Coimbra, Portugal)
2023 Other neuroimaging techniques (in Multiple Sclerosis) Neuroimaging Nowadays in MS: Future Prospects
https://neuroimaging-ms.com/en/course
2023 Biomarcadores de Imagem por Ressonância Magnética nas Metástases Hepáticas: Aplicações de machine learning XLIII Portuguese Meeting of Surgery, Sociedade Portuguesa de Cirurgia - SPCIR 2023
Sociedade Portuguesa de Cirurgia (Estoril, Portugal)
2023 Neuroimaging in neuropsychiatric disorders - Structural, functional and connectivity biomarkers in schizophrenia, bipolar disorder and multiple sclerosis LaSEEB seminars
Instituto Superior Técnico - University of Lisbon - Lisbon, Portugal (Lisbon, Portugal)
2023 Biomarkers for healthcare in cancer: Brain imaging AI and Smart Technology in Mental Health Care for Cancer Survivors (meeting FAITH)
Champalimaud Foundation - Lisbon, Portugal (Lisbon, Portugal)
2023 Biomarkers for Healthcare in Cancer: Neuroimaging Studies of Brain Structure and Functional Connectivity Mechanisms of Resilience: From Bench to Bedside
University of Reading - Reading, UK (online) (Reading (online), United Kingdom)
2022/07/29 Neuroimaging in neuropsychiatric disorders Summer School CIBIT-ICNAS 2022
CIBIT, University of Coimbra
2022/04 The role of motion adaptation in bottom-up mechanisms of perceptual decision-making XIII Forum of BIAL Foundation - BIAL 2022
(Porto)
2022 Artificial Intelligence in Multiple Sclerosis: Does Automated Lesion Segmentation Help? Grupo de Estudos em Esclerose Múltipla (GEEM)
(Peniche, Portugal)
2021/07/22 Structural and functional neuroimaging biomarkers in neuropsychiatry: Schizophrenia and bipolar disorder Summer seminars/internships program at CIBIT
CIBIT, University of Coimbra
2021/07/08 Structural and functional neuroimaging biomarkers in neuropsychiatry: Schizophrenia and bipolar disorder Neuropsychiatry Unit Lab Meetings
Neuropsychiatry Unit, Champalimaud Research
2021 On the optimal strategy for tackling head motion in fMRI data 14th International Conference on Bio-inspired Systems and Signal Processing – BIOSIGNALS 2021
2021 The impact of geometric distortions and their correction on fMRI data analyses Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021
2021 Optimizing EEG source reconstruction with concurrent fMRI-derived spatial priors Meeting of the International Society for Magnetic Resonance in Medicine – ISMRM 2021
2019 Investigating whole-brain MRI markers in Multiple Sclerosis - emerging dimensions in morphometric space XV Mediterranean Conference on Medical and Biological Engineering and Computing - MEDICON 2019
(Coimbra, Portugal)
2018 Permutation distributions for pattern classification in neuroimaging III Luso-Galician Meeting on Biometry
(Aveiro, Portugal)
2018 Functional Neuroimaging in Newborns with Perinatal Asphyxia 7th Congress of the European Academy of Paediatrics Societies
(Paris, France)
2018 Can brAIn imaging help Dr. House? Meetup Data Science Portugal
Data Science Portugal (Coimbra, Portugal)
2018 The neural correlates of bistable motion perception CNC.IBILI Seminars
Center for Neurosciences and Cell Biology, University of Coimbra, Portugal (Coimbra, Portugal)
2017 Functional neuroimaging in newborns with perinatal asphyxia - a preliminary study 1st Artinis NIRS symposium: ARTscientific
(Otterlo, Netherlands)
2017 Maintenance of perceptual stability of interhemispheric surface motion is associated with bottom-up influences generated within hMT+ 7th Iberian Congress on Perception
(Coimbra, Portugal)
2017 Study of motion adaptation and its role in deciding between competing surface representations 7th Iberian Congress on Perception
(Coimbra, Portugal)
2017 High-resolution 7T fMRI data on the perceptual long-range segregation vs. integration of bistable moving stimuli 7th Iberian Congress on Perception
(Coimbra, Portugal)
2017 Beta oscillations during motion integration and segmentation: evidence of binding or perceptual bias? 7th Iberian Congress on Perception
(Coimbra, Portugal)
2016 Global neuronal mechanisms in individual perceptual decision I International showcase of PhD research at the University of Coimbra
University of Coimbra, Portugal (Coimbra, Portugal)
2016 Preprocessing and analysis of fMRI data with SPM Multimodal Imaging Course at the XII National Neuroradiology Meeting
Portuguese Neuroradiology Society (Lisbon, Portugal)
2015 Increased synchrony correlates with visual binding: a study on visual integration on healthy subjects and schizophrenic patients Annual Conference on Clinical Neurophysiology and Neuroimaging
(Munich, Germany)
2015 Visual binding: how brain oscillations shape perception 7th Annual Meeting of the IBILI
(Coimbra, Portugal)
2015 Long-range interhemispheric synchrony reflects perceptual motion integration: a psychophysical and EEG/ERP study 6th Iberian Congress on Perception
(Madrid, Spain)
2015 Diabetes and the brain Diabetes Forum
BIAL (Porto, Portugal)
2015 Brain structure and function: a multimodal overview 4th International Symposium in Applied Bioimaging – BIOIMAGING
i3S - INEB, University of Porto, Portugal (Porto, Portugal)
2015 fMRI data analysis using SPM Multimodal Imaging Course: hands-on in fMRI and VBM at the XI National Neuroradiology Meeting
Portuguese Neuroradiology Society (Aveiro, Portugal)
2014 Early disrupted neurovascular coupling and changed event level hemodynamic response function in type 2 diabetes: an fMRI study 6th Annual Meeting of the IBILI
(Coimbra, Portugal)
2014 Early disrupted neurovascular coupling and changed event level hemodynamic response functions in diabetes: an fMRI study Advanced Course on Analysis Methods and Modelling in Biomedical Research
University of Coimbra, Portugal (Coimbra, Portugal)
2013 Cortical responses during parametric visual speed discrimination in healthy and diabetic patients XIII Meeting of the Portuguese Society for Neurosciences
(Luso, Portugal)
2011 Multivariate pattern analysis of brain structure: A diagnostic tool for Neurofibromatosis type 1 1st Portuguese Meeting in Bioengineering (ENBENG)
(Lisboa, Portugal)
2010 Abnormal brain oscillations might underlie deficits in visual attention and motor control, in Neurofibromatosis type 1 14th Annual European Neurofibromatosis Meeting
(Oslo, Norway)
2010 Abnormally high amplitude of brain oscillations in a neurodevelopmental disorder characterized by enhanced GABAergic transmission: Neurofibromatosis type 1 7th Conference of the Federation of European Neuroscience Societies (FENS)
(Amsterdam, Netherlands)
2010 Neuroimaging analysis: Support Vector Machine-based classification of Neurofibromatosis type 1 from MRI structural scans 1st Annual Meeting of the Brain Imaging Network (BIN)
(Coimbra, Portugal)
2010 Défices no processamento visual associados à NF1 7º Encontro Nacional da Associação Portuguesa de Neurofibromatose
(Lisboa, Portugal)
2010 Abnormal brain oscillations in Neurofibromatosis type 1 2nd Annual Meeting of the IBILI
(Coimbra, Portugal)
2010 Abnormal development of early visual areas in Neurofibromatosis type 1: an fMRI study 2nd Annual Meeting of the IBILI
(Coimbra, Portugal)
2009 SNP2Net: a tool for gene-based predictive modeling in genome-wide association studies IDAMAP 2009 Intelligent Data Analysis in bioMedicine and Pharmacology
(Verona, Italy)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2024/04 - Current (Ana Cortês) Using social cognitive neuroimaging to establish biomarkers in first-episode psychosis [PhD in Biomedical Engineering]
Supervisor of Ana Borges Cortês
PhD in Biomedical Engineering (PhD)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2024 - Current (Francisco Viana) Therapeutic potential of neuromodulatory interventions informed by lesion network mapping in obesity: a transcranial magnetic stimulation and neurofeedback study [PhD in Biomedical Engineering]
Co-supervisor of Francisco Faro Viana
PhD in Biomedical Engineering (PhD)
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
2022 - Current (Hugo Quental) Psychophysical Biomarkers in Multiple Sclerosis [MSc in Molecular and Translational Neuroscience]
Supervisor
Master in Molecular and Translational Neuroscience (Master)
Faculty of Medicine of the University of Coimbra (FMUC), Portugal
2022 - Current (Maria Caranova) Monitoring disease progression in Multiple Sclerosis using connectivity biomarkers derived from advanced diffusion Magnetic Resonance Imaging [PhD in Biomedical Engineering]
Supervisor
PhD in Biomedical Engineering (PhD)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2019/09 - Current (Júlia Soares) Novel multimodal imaging biomarkers of neuronal connectivity in Multiple Sclerosis [PhD in Biomedical Engineering]
Supervisor
PhD in Biomedical Engineering (PhD)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2019/09 - 2024/05 (Maria de Fátima Machado) Predicting Brain Age with Artificial Learning: Implications for Biomarker Development [PhD in Information Science and Technology]
Supervisor of Maria de Fátima Machado
PhD in Information Science and Technology (PhD)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2022/06 - 2023/05 (Diogo Pinto) Brain Hemispheric Asymmetry in Schizophrenia and Bipolar Disorder [MSc in Medicine]
Supervisor
Integrated Master in Medicine (Master)
Faculty of Medicine, University of Coimbra, Portugal
2021/07 - 2022/09 (Ana Cortês) Mechanisms of high-level perceptual decision: a neuroscientific approach [MSc in Biomedical Engineering]
Supervisor of Ana Cortês
MSc in Biomedical Engineering (Master)
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2021/07 - 2022/09 (Heloisa Barbosa da Silva) Biomarkers of Magnetic Resonance Imaging in Liver metastases - Applications of machine learning [MSc in Biomedical Engineering]
Supervisor of Heloisa Barbosa da Silva
MSc in Biomedical Engineering (Master)
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2021/07 - 2022/09 (Jacinta Silva) Functional connectivity as potential biomarkers in Multiple Sclerosis using MRI [MSc in Biomedical Engineering]
Supervisor of Jacinta Silva
MSc in Biomedical Engineering (Master)
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2021/07 - 2022/06 (Maria Caranova) Structural connectivity as potential biomarkers in Multiple Sclerosis using MRI [MSc in Biomedical Engineering]
Supervisor of Maria Caranova
MSc in Biomedical Engineering (Master)
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2020/09 - 2021/10 (Joana Santos) Models of functional connectivity as potential biomarkers in Multiple Sclerosis using fMRI [MSc in Biomedical Engineering]
Supervisor of Joana Santos
MSc in Biomedical Engineering (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2019/09 - 2020/12 (Catarina Guerra) Brain response functions and neurovascular coupling in Type 2 Diabetes: insights from fMRI [MSc in Biomedical Engineering]
Supervisor of Catarina Guerra
MSc in Biomedical Engineering (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2018/09 - 2019/07 (Júlia Soares) From neuroscience to the identification of structural and functional medical imaging biomarkers in Multiple Sclerosis [MSc in Biomedical Engineering]
Supervisor of Júlia Soares
MSc in Biomedical Engineering (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal

Event organisation

Event name
Type of event (Role)
Institution / Organization
2023 - 2023 Champalimaud Research Symposium (CRSy23) (2023/10 - 2023/10)
Conference (Other)
Fundação Champalimaud, Portugal
2023 - 2023 3rd ISMRM Iberian Chapter Annual Meeting (ISMRM Iberian Chapter 2023) (2023 - 2023)
Conference (Other)
2022 - 2022 2nd ISMRM Iberian Chapter Annual Meeting (ISMRM Iberian Chapter 2022) (2022 - 2022)
Conference (Other)
2022 - 2022 1st annual meeting of CIBIT (CIBIT 2022) (2022 - 2022)
Conference (Other)
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2021 - 2021 FENS Regional Meeting (FRM 2021) (2021 - 2021)
Symposium (Other)
Federation of European Neuroscience Societies (FENS), Belgium
2021 - 2021 1st ISMRM Iberian Chapter Annual Meeting (ISMRM Iberian Chapter 2021) (2021 - 2021)
Conference (Other)
2017 - 2017 7th Iberian Congress on Perception (CIP 2017) (2017/07/06 - 2017/07/07)
Congress (Co-organisor)
Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

IBILI - Faculty of Medicine, University of Coimbra , Portugal

Event participation

Activity description
Type of event
Event name
Institution / Organization
2024/09/27 - Current European Researchers' Night 2024
Exhibition
2023/09 - 2023/09 Member of a roundtable: Doenças Neuropsiquiátricas: Investigação e Futuras Direções
Conference
III Biomedical Engineering Summit (III BE SUMMIT)
2023/03/25 - 2023/03/25 Session moderator: Communications about artificial intelligence
Symposium
1º Congresso Internacional de Radiologia de Coimbra - CIRC 2023
2022/05/30 - 2023 Seminar for basic school students on the World Multiple Sclerosis Day
Seminar
Escola Azerêdo Perdigão, Portugal
2022 - 2023 Seminar: Neuroimaging biomarkers in neuropsychiatry, in the Summer School 2022 training program of CIBIT-ICNAS
Seminar
Summer School 2022 training program of CIBIT-ICNAS
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2022 - 2022 Forum: Research Data Plans
Workshop
2022 - 2022 Panel member of round table: From Big data to Good data: Development of AI reliable clinical models
Round table
Inovação em Saúde – Mostra Tecnológica de Saúde
Universidade de Coimbra, Portugal
2021/07/02 - 2021/07/05 Brokerage Event of CLUSTER Health - Horizon Europe
Meeting
2021 - 2021 Multilingual kids review for OHBM 2021
Exhibition
Annual Meeting of the Organization for Human Brain Mapping (OHBM 2021)
2021 - 2021 EAN-EBRAINS workshop: The future of medical data sharing in clinical neurosciences
Workshop
2021 - 2021 Forum: Research Data Management
Symposium
2017 - 2018 Brain Awareness Week (BAW), neuroscience dissemination activities in Portugal
Exhibition
IBILI - Faculty of Medicine, University of Coimbra , Portugal
2016/10/24 - 2016/10/24 Medical devices in brain research: from design to clinical application
Symposium
Medical devices in brain research: from design to clinical application
IBILI - Faculty of Medicine, University of Coimbra , Portugal

Jury of academic degree

Topic
Role
Candidate name (Type of degree)
Institution / Organization
2023 Music of the brain: a pattern recognition framework to investigate the neural correlates of music [MSc in Biomedical Engineering]
(Thesis) Main arguer
Ana Gabriela Guedes (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2023 Multimodal EEG-fMRI of Sensorimotor Brain Networks during Motor Imagery and Resting State [MSc in Biomedical Engineering]
(Thesis) Main arguer
Inês Filipa Pacheco Gonçalves (Master)
Departamento de Bioengenharia, Instituto Superior Técnico, Portugal
2022 On the Short-Term Prediction of Multiple Sclerosis Disease Progression [MSc in Biomedical Engineering]
(Thesis) Main arguer
Joana Sofia Baião Vieira (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2021/11/17 On the explainability of multiple sclerosis disease progression models [MSc in Biomedical Engineering]
(Thesis) Main arguer
Maria João Coelho de Sousa (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2021 Avaliação da conectividade no cérebro com base em dados de ressonância magnética funcional [BSc in Biomedical Engineering]
(Thesis) Main arguer
Ana Margarida Soutinho Caldas (Other)
Instituto Politécnico de Coimbra Instituto Superior de Engenharia de Coimbra, Portugal
2020 Evaluation and Prediction of Multiple Sclerosis Disease Progression [MSc in Biomedical Engineering]
(Thesis) Main arguer
Hugo Duarte Oliveira (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2019 Machine Learning Classification in Alzheimer¿s disease based on 11C-Pittsburgh Compound B (PiB) and 11C-(R)-PK11195 (PK) PET imaging measures and the correlation between these two biomarkers [MSc in Biomedical Engineering]
(Thesis) Main arguer
Marta Silva Lapo Pais (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2019 Diferential diagnosis of Alzheimer's Disease based on multimodal imaging data (MRI, PET and DTI) [MSc in Biomedical Engineering]
(Thesis) Main arguer
Daniel Andrade Pinho Agostinho (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2018 Volumetry of deep brain structure with Magnetic Resonance Imaging [MSc in Medical Imaging Technologies]
(Thesis) Main arguer
Lucie Guerra Martins (Master)
Department of Medical Sciences, University of Aveiro, Portugal
2018 Neural complications of type 2 diabetes mellitus. A functional and structural magnetic resonance imaging study [PhD in Health Sciences (thesis project proposal)]
(Thesis) Main arguer
Nádia Isabel Silva Canário (Other)
Faculty of Medicine, University of Coimbra, Portugal
2017 Real time fMRI Neurofeedback based on interhemispheric functional connectivity: a motor imagery paradigm [MSc in Biomedical Engineering]
(Thesis) Main arguer
João André Figueiredo Pereira (Master)
Faculty of Sciences and Technology, University of Coimbra, Portugal
2015 Bio-inspired computational modeling of binocular disparity and optical motion based on general neurophysiological findings in the visual cortex [PhD in Electrical and Computer Engineering (thesis project proposal)]
(Thesis) Main arguer
Fernanda da Cunha e Castro Faria (Other)
Faculty of Sciences and Technology, University of Coimbra, Portugal

Ad Hoc journal article review

Journal title (ISSN) Publisher
2023 - Current IEEE Journal of Biomedical and Health Informatics
2023 - Current Frontiers in Neuroinformatics
2023 - Current Frontiers in Neuroscience
2022 - Current Frontiers in Neurology
2021 - Current Journal of Personalized Medicine
2021 - Current Schizophrenia Bulletin Oxford Academic
2021 - Current Frontiers in Psychiatry
2020 - Current Health and Technology (2190-7196) Springer-Verlag
2020 - Current Research on Biomedical Engineering
2019 - Current NeuroImage (1095-9572) Elsevier
2019 - Current Scientific Reports (2045-2322) Springer Science and Business Media LLC
2018 - Current Human Brain Mapping (1097-0193) Wiley (John Wiley & Sons)
2017 - Current PLOS ONE Public Library of Science

Association member

Society Organization name Role
2019 - Current Portuguese Society for Neuroscience (SPN) Member
2019 - Current Federation of European Neuroscience Societies (FENS) Member
2018 - 2018 Society for Neuroscience (SfN) Member
2009 - 2010 Organization for Human Brain Mapping (OHBM) Member

Committee member

Activity description
Role
Institution / Organization
2018 - 2023 Executive Board of the Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT)
Member
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2018 - 2023 Scientific Council of the Coimbra Institute for Biomedical Imaging and Translational Research (CIBIT)
Member
CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2024 - 2024 Neurovascular Unit in Health and Disease (Curso de doutoramento (conclusão de unidades curriculares)) Universidade de Coimbra, Portugal
2023 - 2024 Brain Mind and Behavior (Mestrado) School of Psychology and Life Sciences, Universidade Lusófona, Portugal
2022/04/28 - 2023/04/28 Movement and Demyelinating Disorders MSc in Molecular and Translational Neuroscience - Movement and Demyelinating Disorders (Master) Faculty of Medicine, University of Coimbra, Portugal
2017/03 - 2023/04 Medical Imaging Biomarkers in Translational Research PhD in Health Sciences (Doutoramento) Faculty of Medicine, University of Coimbra, Portugal
2023 - 2023 Emerging Biomedical Technologies Master in Pharmacy (Mestrado) Escola Superior de Tecnologias da Saúde de Coimbra, Portugal
2020/03 - 2021/04 Identification and Validation of Biomarkers in Medical Imaging PhD in Biomedical Engineering - Identification and Validation of Biomarkers in Medical Imaging (Doutoramento) Faculty of Sciences and Technology, University of Coimbra, Portugal
2021 - 2021 Neurobiology II Integrated MSc in Biomedical Engineering - Neurobiology II (Mestrado integrado) Faculty of Sciences and Technology, University of Coimbra, Portugal
2019 - 2021 Medical Imaging Equipment Engenharia Biomédica - Bioeletrónica (Licenciatura) Instituto Politécnico de Coimbra Instituto Superior de Engenharia de Coimbra, Portugal

Journal scientific committee

Journal title (ISSN) Publisher
2021 - Current Editorial Board of Frontiers in Psychiatry - Mood and Anxiety Disorders (Review Editor)
2021 - Current Reviewer Board of Tomography
2022 - 2022 Guest Editor of Research Topic in Frontiers in Psychiatry

Mentoring / Tutoring

Topic Student name
2024/02 - 2024/08 (Beatriz Vale) Internship in brain imaging and cancer research at Neuropsychiatry Unit, Champalimaud Foundation, Portugal Beatriz Vale
2023/09 - 2024/08 (Ana Fonseca) Internship in brain imaging and feeding behavior for the Master in Neuroscience (University of Glasgow) at Neuropsychiatry Unit, Champalimaud Foundation, Portugal Ana Fonseca
2022/05 - 2022/05 (Daniil) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal Daniil
2022/05 - 2022/05 (Rúben Maia) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal Rúben Maia
2022/02 - 2022/03 (David Berhanu) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal David Berhanu
2022/01 - 2022/01 (Inês Carneiro) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal Inês Carneiro
2021/11 - 2021/11 (Pedro Cruz) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal Pedro Cruz
2021/09 - 2021/09 (Teresa Morais) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal Teresa Morais
2021/07 - 2021/08 (undergraduate students) Summer internships for students of Biomedical Engineering, Biology, and Medicine at CIBIT, University of Coimbra, Portugal Biomedical Engineering, Biology, and Medicine
2021/06 - 2021/06 (Pedro Barradas) Internship in brain research for medical residency in neuroradiology at CIBIT, University of Coimbra, Portugal Pedro Barradas
2019/07 - 2019/08 (Sofia Silva Pereira) Summer internship for the MSc in Biomedical Engineering at CIBIT, University of Coimbra, Portugal Sofia Silva Pereira
2019/07 - 2019/08 (Bruno Alexandre Santos) Summer internship for the MSc in Biomedical Engineering at CIBIT, University of Coimbra, Portugal Bruno Alexandre Santos
2018/03 - 2018/06 (Rute Pino) Research project in Computational Vision and Biological Perception, MSc in Biomedical Engineering, at ICNAS, University of Coimbra, Portugal Rute Pino
2015 - 2017 (medical students) Lab rotations under the Research Exchange Project of the Integrated MSc in Medicine at ICNAS, University of Coimbra, Portugal Medical students

Other jury / evaluation

Activity description Institution / Organization
2020 - Current Postodctoral Researchers (contracts) recruitment committee CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
2020 - Current PhD Research Scholarships recruitment committee CIBIT - Institute of Nuclear Sciences Applied to Health, University of Coimbra, Portugal
Distinctions

Award

2023 Travel Award - FENS Regional Meeting 2023
Portuguese Society for Neuroscience (SPN), Portugal
2023 Honorable mention - clinical investigation poster: Alterações volumétricas do hipotálamo na diabetes tipo 2 - estudo imagiológico em humanos.
Sociedade Portuguesa de Diabetologia, Portugal
2023 Travel Award - ECTRIMS Summer School 2023: From Biological Basis to Ecological Implications of Rehabilitation in MS
European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS), Switzerland
2023 Best scientific communication: Biomarcadores de imagem por ressonância magnética nas metástases hepáticas: Aplicações de "machine learning"
Sociedade Portuguesa de Cirurgia, Portugal
2022 Winner of the Brain-Art competition 2022 (category of Videos & Animations) with "The Swirl Brain"
Organization for Human Brain Mapping (OHBM), United States
2022 Best scientific article of translational research: A fundamental distinction in early neural processing of implicit social interpretation in schizophrenia and bipolar disorder
Centro Hospitalar e Universitário de Coimbra EPE, Portugal
2021 Abstract Grant - 37th Congress of ECTRIMS 2021
European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS), Switzerland
2019 1st prize - Janssen Neuroscience RWE Award 2019: Clinical Series
Janssen-Cilag Farmacêutica Lda, Portugal
2019 Travel Award - ECTRIMS Summer School 2019: Methodology of clinical research and statistics in Multiple Sclerosis
European Committee for Treatment and Research in Multiple Sclerosis (ECTRIMS), Switzerland
2019 Travel Award - FENS Regional Meeting 2019
Federation of European Neuroscience Societies (FENS), Belgium