Artigo em revista |
- Jan Laine; Sarah S.T. Mak; Nuno F.G. Martins; Xihan Chen; M. Thomas P. Gilbert; Felicity C. Jones; Mikkel Winther Pedersen;
Anders Romundset; Andrew D. Foote. "Late Pleistocene stickleback environmental genomes reveal the chronology of freshwater
adaptation". Current Biology (2024): https://doi.org/10.1016/j.cub.2024.01.056.
10.1016/j.cub.2024.01.056
- Caroline Isabel Kothe; Jacob Agerbo Rasmussen; Sarah Mak; M Thomas P Gilbert; Joshua Evans. "Exploring the microbial diversity
of novel misos with metagenomics". Food Microbiology 117 (2024): https://curis.ku.dk/portal/en/publications/exploring-the-microbial-diversity-of-novel-misos-with-metagenomics(9b3a4586-a4a8-422a-87cc-060770cc22f4).html.
10.1016/j.fm.2023.104372
- Cátia Lúcio Pereira; Zeynep Ersoy; M Thomas P Gilbert; Dominique Gravel; Miguel B Araújo; Miguel G Matias. "Future-proofing
environmental DNA and trait-based predictions of food webs". BioScience (2023): https://doi.org/10.1093/biosci/biad089.
10.1093/biosci/biad089
- Germán Hernández-Alonso; Jazmín Ramos-Madrigal; Hein van Grouw; Marta Maria Ciucani; Emily Louisa Cavill; Mikkel-Holger S
Sinding; Shyam Gopalakrishnan; et al. "Redefining the Evolutionary History of the Rock Dove, Columba livia, Using Whole Genome
Sequences". Molecular Biology and Evolution (2023): https://doi.org/10.1093/molbev/msad243.
10.1093/molbev/msad243
- Linett Rasmussen; Claudia Fontsere; Iván D. Soto-Calderón; Rosamira Guillen; Anne Savage; Anders Johannes Hansen; Christina
Hvilsom; M. Thomas P. Gilbert. "Assessing the genetic composition of cotton-top tamarins (Saguinus oedipus) before sweeping
anthropogenic impact". Molecular Ecology (2023): https://doi.org/10.1111/mec.17130.
10.1111/mec.17130
- Ostaizka Aizpurua; Kees Blijleven; Urvish Trivedi; M. Thomas P. Gilbert; Antton Alberdi. "Unravelling animal–microbiota evolution
on a chip". Trends in Microbiology (2023): https://doi.org/10.1016/j.tim.2023.04.010.
10.1016/j.tim.2023.04.010
- Jacob A Rasmussen; Pia Kiilerich; Abdullah S Madhun; Rune Waagbø; Erik-Jan R Lock; Lise Madsen; M Thomas P Gilbert; Karsten
Kristiansen; Morten T Limborg. "Co-diversification of an intestinal Mycoplasma and its salmonid host". The ISME Journal
(2023): https://doi.org/10.1038/s41396-023-01379-z.
10.1038/s41396-023-01379-z
- Christina Lehmkuhl Noer; Morten T. Limborg; Sandra Breum Andersen; M Thomas P Gilbert; Simon Bahrndorff; Signe Lolle. "Temanummer
om hologenomik i Kaskelot". Kaskelot 245 (2023): 12-33. https://curis.ku.dk/portal/en/publications/temanummer-om-hologenomik-i-kaskelot(52155e58-7bff-476f-a2c6-4084ecd67ce8).html.
- Ryan R. Germain; Shaohong Feng; Guangji Chen; Gary R. Graves; Joseph A. Tobias; Carsten Rahbek; Fumin Lei; et al. "Species-specific
traits mediate avian demographic responses under past climate change". Nature Ecology & Evolution (2023): https://doi.org/10.1038/s41559-023-02055-3.
10.1038/s41559-023-02055-3
- Amanda Bolt Botnen; Mads Bjørn Bjørnsen; Antton Alberdi; M.Thomas P. Gilbert; Ostaizka Aizpurua. "A simplified protocol for
DNA extraction from FTA cards for faecal microbiome studies". Heliyon (2023): https://doi.org/10.1016/j.heliyon.2023.e12861.
10.1016/j.heliyon.2023.e12861
- Pnina Cohen; Roberto Bacilieri; Jazmín Ramos-Madrigal; Eyal Privman; Elisabetta Boaretto; Audrey Weber; Daniel Fuks; et al.
"Ancient DNA from a lost Negev Highlands desert grape reveals a Late Antiquity wine lineage". PNAS 120 17 (2023): https://curis.ku.dk/portal/en/publications/ancient-dna-from-a-lost-negev-highlands-desert-grape-reveals-a-late-antiquity-wine-lineage(f64e8c6a-6318-4f87-81ea-9530d088a737).html.
10.1073/pnas.2213563120
- Marta Maria Ciucani; Jazmín Ramos-Madrigal; Germán Hernández-Alonso; Alberto Carmagnini; Sabhrina Gita Aninta; Xin Sun; Camilla
Hjorth Scharff-Olsen; et al. "The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs".
iScience 26 8 (2023): https://curis.ku.dk/portal/en/publications/the-extinct-sicilian-wolf-shows-a-complex-history-of-isolation-and-admixture-with-ancient-dogs(c6ef927d-98cc-4b9d-8972-2f0ddb399b10).html.
10.1016/j.isci.2023.107307
- Fátima Sánchez Barreiro; Binia De Cahsan; Michael V Westbury; Xin Sun; Ashot Margaryan; Claudia Fontsere; Michael W. Bruford;
et al. "Historic Sampling of a Vanishing Beast". Molecular Biology and Evolution 40 9 (2023): https://curis.ku.dk/portal/en/publications/historic-sampling-of-a-vanishing-beast(3707d6fd-869f-4a8b-bdd5-a7df842830c9).html.
10.1093/molbev/msad180
- Edward S. Rice; Antton Alberdi; James Alfieri; Giridhar Athrey; Jennifer R. Balacco; Philippe Bardou; Heath Blackmon; et al.
"A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants". BMC Biology
21 (2023): https://curis.ku.dk/portal/en/publications/a-pangenome-graph-reference-of-30-chicken-genomes-allows-genotyping-of-large-and-complex-structural-variants(90a96d3d-9104-4710-98a2-0c0602d96a80).html.
10.1186/s12915-023-01758-0
- Xin Sun; Yue Chen Liu; Mikhail P. Tiunov; Dmitry O. Gimranov; Yan Zhuang; Yu Han; Carlos A. Driscoll; et al. "Ancient DNA
reveals genetic admixture in China during tiger evolution". Nature Ecology and Evolution 7 11 (2023): 1914-1929. https://curis.ku.dk/portal/en/publications/ancient-dna-reveals-genetic-admixture-in-china-during-tiger-evolution(d9b49fca-84a7-44e2-b9b0-50fff611d50a).html.
10.1038/s41559-023-02185-8
- Marcela Sandoval-Velasco; Anuradha Jagadeesan; Jazmín Ramos-Madrigal; María C. Ávila-Arcos; Cesar A. Fortes-Lima; Judy Watson;
Erna Johannesdóttir; et al. "The ancestry and geographical origins of St Helena's liberated Africans". American Journal
of Human Genetics 110 9 (2023): 1590-1599. https://curis.ku.dk/portal/en/publications/the-ancestry-and-geographical-origins-of-st-helenas-liberated-africans(c3692449-d429-4d71-b9e4-d685d9de9863).html.
10.1016/j.ajhg.2023.08.001
- Mikkel Skovrind; George Pacheco; Emil Aputsiaq Flindt Christensen; Shyam Gopalakrishnan; Katharina Fietz; Tore Hejl Holm-Hansen;
Filipe G Vieira; et al. "Uncovering neutral and adaptive genomic differentiation among European perch with brackish water
and freshwater origin in the western Baltic Sea region". Fisheries Research 268 (2023): https://curis.ku.dk/portal/en/publications/uncovering-neutral-and-adaptive-genomic-differentiation-among-european-perch-with-brackish-water-and-freshwater-origin-in-the-western-baltic-sea-region(653dbf33-4edf-473c-b174-e6ea84c40763).html.
10.1016/j.fishres.2023.106846
- Germán Hernández-Alonso; Jazmín Ramos-Madrigal; Xin Sun; Camilla Hjorth Scharff-Olsen; Mikkel-Holger S. Sinding; Nuno F. Martins;
Marta Maria Ciucani; et al. "Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole-genome
sequencing". Ecology and Evolution 13 8 (2023): https://curis.ku.dk/portal/en/publications/conservation-implications-of-elucidating-the-korean-wolf-taxonomic-ambiguity-through-wholegenome-sequencing(46c4f2ff-1273-4689-b107-504e2097da95).html.
10.1002/ece3.10404
- David Díez-del-Molino; Marianne Dehasque; J. Camilo Chacón-Duque; Patrícia Pecnerová; Alexei Tikhonov; Albert Protopopov;
Valeri Plotnikov; et al. "Genomics of adaptive evolution in the woolly mammoth". Current Biology 33 9 (2023): https://curis.ku.dk/portal/en/publications/genomics-of-adaptive-evolution-in-the-woolly-mammoth(7b56f2bf-5e04-49b3-b366-7d8b863f4d2d).html.
10.1016/j.cub.2023.03.084
- Søren B. Hansen; Davide Bozzi; Sarah Mak; Cecilie G. Clausen; Tue Nielsen; Miyako Kodama; Lars Hestbjerg Hansen; M Thomas
P Gilbert; Morten T. Limborg. "Intestinal epigenotype of Atlantic salmon (Salmo salar) associates with tenacibaculosis and
gut microbiota composition". Genomics 115 3 (2023): https://curis.ku.dk/portal/en/publications/intestinal-epigenotype-of-atlantic-salmon-salmo-salar-associates-with-tenacibaculosis-and-gut-microbiota-composition(2ec5d086-07c2-4d39-b4c9-caab09a8731c).html.
10.1016/j.ygeno.2023.110629
- Pei Zhang; Yuanzhen Zhu; Qunfei Guo; Ji Li; Xiaoyu Zhan; Hao Yu; Nianxia Xie; et al. "On the origin and evolution of RNA editing
in metazoans". Cell Reports 42 2 (2023): https://curis.ku.dk/portal/en/publications/on-the-origin-and-evolution-of-rna-editing-in-metazoans(3c0f420b-f62d-48c3-b6aa-64c76767c252).html.
10.1016/j.celrep.2023.112112
- Ricardo Rodríguez-Varela; Kristjan H. S. Moore; S. Sunna Ebenesersdóttir; Gulsah Merve Kilinc; Anna Kjellström; Ludvig Papmehl-Dufay;
Clara Alfsdotter; et al. "The genetic history of Scandinavia from the Roman Iron Age to the present". Cell 186 1 (2023):
32-46.e19. https://curis.ku.dk/portal/en/publications/the-genetic-history-of-scandinavia-from-the-roman-iron-age-to-the-present(e3f68ee9-2b38-443d-ab9f-829cb939e994).html.
10.1016/j.cell.2022.11.024
- Ryan Ross Germain; Shaohong Feng; Lucas Buffan; Carlos P. Carmona; Guangii Chen; Gary R. Graves; Joseph A. Tobias; et al.
"Changes in the functional diversity of modern bird species over the last million years". PNAS 120 7 (2023): https://curis.ku.dk/portal/en/publications/changes-in-the-functional-diversity-of-modern-bird-species-over-the-last-million-years(db53b3a4-3de6-4924-8024-953f265b57d5).html.
10.1073/pnas.2201945119
- Renita Danabalan; Kevin Merkel; Ida Bærholm Schnell; Mimi Arandjelovic; Christophe Boesch; Gregory Brazzola; Paula Dieguez;
et al. "Mammal mitogenomics from invertebrate-derived DNA". Environmental DNA 5 5 (2023): 1004-1015. https://curis.ku.dk/portal/en/publications/mammal-mitogenomics-from-invertebratederived-dna(f4669a36-23ad-4e1b-8dad-ab83de16bdbb).html.
10.1002/edn3.436
- Lucie A. Bergeron; Søren Besenbacher; Jiao Zheng; Panyi Li; Mads Frost Bertelsen; Benoit Quintard; Joseph I. Hoffman; et al.
"Evolution of the germline mutation rate across vertebrates". Nature 615 (2023): 285-291. https://curis.ku.dk/portal/en/publications/evolution-of-the-germline-mutation-rate-across-vertebrates(d860ae92-55e6-4e4e-9ee1-480f62617565).html.
10.1038/s41586-023-05752-y
- Charles Christian Riis Hansen; Áki Jarl Láruson; Jacob Agerbo Rasmussen; Jesus Adrian Chimal Ballesteros; Mikkel-Holger S.
Sinding; Gunnar T. Hallgrimsson; Menja von Schmalensee; et al. "Genomic diversity and differentiation between island and mainland
populations of white-tailed eagles (Haliaeetus albicilla)". Molecular Ecology 32 8 (2023): 1925-1942. https://curis.ku.dk/portal/en/publications/genomic-diversity-and-differentiation-between-island-and-mainland-populations-of-whitetailed-eagles-haliaeetus-albicilla(a2fb2cfb-b13a-40b4-b661-27d51a378489).html.
10.1111/mec.16858
- Xin Sun; Marta Maria Ciucani; Jacob Agerbo Rasmussen; M. Thomas P. Gilbert; Mikkel-Holger S. Sinding. "Genomic evidence refutes
the hypothesis that the Bornean banteng is a distinct species". BMC Ecology and Evolution (2022): https://doi.org/10.1186/s12862-022-02062-1.
10.1186/s12862-022-02062-1
- Emily Louisa Cavill; Shanlin Liu; Xin Zhou; M. Thomas P. Gilbert. "To bee, or not to bee? One leg is the question". Molecular
Ecology Resources (2022): https://doi.org/10.1111/1755-0998.13578.
10.1111/1755-0998.13578
- Livia V. Patrono; Bram Vrancken; Matthias Budt; Ariane Düx; Sebastian Lequime; Sengül Boral; M. Thomas P. Gilbert; et al.
"Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic". Nature Communications
(2022): https://doi.org/10.1038/s41467-022-29614-9.
10.1038/s41467-022-29614-9
- Evelyn L. Jensen; David Díez-del-Molino; M. Thomas P. Gilbert; Laura D. Bertola; Filipa Borges; Vlatka Cubric-Curik; Miguel
de Navascués; et al. "Ancient and historical DNA in conservation policy". Trends in Ecology & Evolution 37 5 (2022):
420-429. https://doi.org/10.1016/j.tree.2021.12.010.
10.1016/j.tree.2021.12.010
- Antton Alberdi; Sandra B. Andersen; Morten T. Limborg; Robert R. Dunn; M. Thomas P. Gilbert. "Disentangling host–microbiota
complexity through hologenomics". Nature Reviews Genetics (2022): https://doi.org/10.1038/s41576-021-00421-0.
10.1038/s41576-021-00421-0
- Jacob Agerbo Rasmussen; Kasper Rømer Villumsen; Madeleine Ernst; Martin Hansen; Torunn Forberg; Shyam Gopalakrishnan; M. Thomas
P. Gilbert; et al. "A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive
in rainbow trout (Oncorhynchus mykiss)". Microbiome (2022): https://doi.org/10.1186/s40168-021-01221-8.
10.1186/s40168-021-01221-8
- Ricardo Cardoso Neves; Ask Møbjerg; Miyako Kodama; Jazmín Ramos-Madrigal; M Thomas P Gilbert; Nadja Møbjerg. "Differential
expression profiling of heat stressed tardigrades reveals major shift in the transcriptome". Comparative Biochemistry and
Physiology - Part A: Molecular & Integrative Physiology 267 (2022): https://curis.ku.dk/portal/en/publications/differential-expression-profiling-of-heat-stressed-tardigrades-reveals-major-shift-in-the-transcriptome(e6ac5cd2-5070-4c87-b047-f9cb8cfcc4df).html.
10.1016/j.cbpa.2022.111169
- Beatrice Demarchi; Josefin Stiller; Alicia Grealy; Meaghan Mackie; Yuan Deng; M Thomas P Gilbert; Julia Clarke; et al. "Ancient
proteins resolve controversy over the identity of Genyornis eggshell". PNAS 119 43 (2022): https://curis.ku.dk/portal/en/publications/ancient-proteins-resolve-controversy-over-the-identity-of-genyornis-eggshell(562fc0a1-e407-4a52-ad24-732d85e8a5ff).html.
10.1073/pnas.2109326119
- Anders Bergström; David W. G. Stanton; Ulrike H. Taron; Laurent Frantz; Mikkel-Holger S. Sinding; Erik Ersmark; Saskia Pfrengle;
et al. "Grey wolf genomic history reveals a dual ancestry of dogs". Nature 607 7918 (2022): 313-320. https://curis.ku.dk/portal/en/publications/grey-wolf-genomic-history-reveals-a-dual-ancestry-of-dogs(56acb259-71bf-4a15-8ca4-ec29700175a3).html.
10.1038/s41586-022-04824-9
- Ask Møbjerg; Miyako Kodama; Jazmín Ramos-Madrigal; Ricardo Cardoso Neves; Aslak Jørgensen; Morten Schiøtt; M Thomas P Gilbert;
Nadja Møbjerg. "Extreme freeze-tolerance in cryophilic tardigrades relies on controlled ice formation but does not involve
significant change in transcription". Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology
271 (2022): https://curis.ku.dk/portal/en/publications/extreme-freezetolerance-in-cryophilic-tardigrades-relies-on-controlled-ice-formation-but-does-not-involve-significant-change-in-transcription(af6380e4-d3f9-4039-97d6-332a5abc35d9).html.
10.1016/j.cbpa.2022.111245
- Adam Koziol; Iñaki Odriozola; Lasse Nyholm; Aoife Leonard; Carlos San Jose; Joana Pauperio; Clara Ferreira; et al. "Enriching
captivity conditions with natural elements does not prevent the loss of wild-like gut microbiota but shapes its compositional
variation in two small mammals". MicrobiologyOpen 11 5 (2022): https://curis.ku.dk/portal/en/publications/enriching-captivity-conditions-with-natural-elements-does-not-prevent-the-loss-of-wildlike-gut-microbiota-but-shapes-its-compositional-variation-in-two-small-mammals(8bd54553-b599-446b-9adb-0df95d7f107e).html.
10.1002/mbo3.1318
- Matt A. Field; Sonu Yadav; Olga Dudchenko; Meera Esvaran; Benjamin D. Rosen; Ksenia Skvortsova; Richard J. Edwards; et al.
"The Australian dingo is an early offshoot of modern breed dogs". Science Advances 8 16 (2022): https://curis.ku.dk/portal/en/publications/the-australian-dingo-is-an-early-offshoot-of-modern-breed-dogs(d7022251-61dd-490f-be60-3a5c053a18f4).html.
10.1126/sciadv.abm5944
- Christina Lynggaard; Alejandro Oceguera-Figueroa; Sebastian Kvist; M Thomas P Gilbert; Kristine Bohmann. "The potential of
aquatic bloodfeeding and nonbloodfeeding leeches as a tool for iDNA characterisation". Molecular Ecology Resources
22 2 (2022): 539-553. https://curis.ku.dk/portal/en/publications/the-potential-of-aquatic-bloodfeeding-and-nonbloodfeeding-leeches-as-a-tool-for-idna-characterisation(35c4a1b9-4ca6-419b-a171-ef9385ee2c06).html.
10.1111/1755-0998.13486
- Vanessa C. Bieker; Paul Battlay; Bent Petersen; Xin Sun; Jonathan Wilson; Jaelle C. Brealey; François Bretagnolle; et al.
"Uncovering the genomic basis of an extraordinary plant invasion". Science Advances 8 34 (2022): https://curis.ku.dk/portal/en/publications/uncovering-the-genomic-basis-of-an-extraordinary-plant-invasion(ace550fd-44b6-4748-93d3-4224846d6555).html.
10.1126/sciadv.abo5115
- José Cerca; Bent Petersen; José Miguel Lazaro-Guevara; Angel Rivera-Colón; Siri Birkeland; Joel Vizueta; Siyu Li; et al. "The
genomic basis of the plant island syndrome in Darwin’s giant daisies". Nature Communications 13 (2022): https://curis.ku.dk/portal/en/publications/the-genomic-basis-of-the-plant-island-syndrome-in-darwins-giant-daisies(dc65f041-f8b7-4375-b1bb-2fc5fdd01abc).html.
10.1038/s41467-022-31280-w
- Núria Tous; Sofia Marcos; Farshad Goodarzi Boroojeni; Ana Pérez de Rozas; Jürgen Zentek; Andone Estonba; Dorthe Sandvang;
et al. "Novel strategies to improve chicken performance and welfare by unveiling host-microbiota interactions through hologenomics".
Frontiers in Physiology 13 (2022): https://curis.ku.dk/portal/en/publications/novel-strategies-to-improve-chicken-performance-and-welfare-by-unveiling-hostmicrobiota-interactions-through-hologenomics(17088842-461d-4754-8c1c-348512aacb5b).html.
10.3389/fphys.2022.884925
- Giulio Formenti; Kathrin Theissinger; Carlos Fernandes; Iliana Bista; Aureliano Bombarely; Christoph Bleidorn; Claudio Ciofi;
et al. "The era of reference genomes in conservation genomics". Trends in Ecology and Evolution 37 3 (2022): 197-202.
https://curis.ku.dk/portal/en/publications/the-era-of-reference-genomes-in-conservation-genomics(ecbe7ef3-aa3c-47f7-95da-661c294407ad).html.
10.1016/j.tree.2021.11.008
- Jianqing Lin; David A. Duchêne; Christian Carøe; Oliver Smith; Marta Maria Ciucani; Jonas Niemann; Douglas Richmond; et al.
"Probing the genomic limits of de-extinction in the Christmas Island rat". Current Biology 32 7 (2022): 1650-1656.e3.
https://curis.ku.dk/portal/en/publications/probing-the-genomic-limits-of-deextinction-in-the-christmas-island-rat(dcd4798b-6fa0-4ba1-85ca-28dbe05ae313).html.
10.1016/j.cub.2022.02.027
- Natalie Iwanycki Ahlstrand; Shyam Gopalakrishnan; Filipe G Vieira; Vanessa C. Bieker; Heidi M. Meudt; Stephanie Dunbar-Co;
Carl J. Rothfels; et al. "Travel Tales of a Worldwide Weed". Frontiers in Plant Science 13 (2022): https://curis.ku.dk/portal/en/publications/travel-tales-of-a-worldwide-weed(41d2d4e5-2332-46ec-af9c-c4da7cc95336).html.
10.3389/fpls.2022.838166
- Theresa L. Cole; Chengran Zhou; Miaoquan Fang; Hailin Pan; Daniel T. Ksepka; Steven R. Fiddaman; Christopher A. Emerling;
et al. "Genomic insights into the secondary aquatic transition of penguins". Nature Communications 13 (2022): https://curis.ku.dk/portal/en/publications/genomic-insights-into-the-secondary-aquatic-transition-of-penguins(b1bd3aae-8c2b-4d1f-8ba2-a7d376f510d1).html.
10.1038/s41467-022-31508-9
- Mads Lund; Jacob Agerbo Rasmussen; Jazmín Ramos-Madrigal; Ruairidh Sawers; M Thomas P Gilbert; Christopher Barnes. "Rhizosphere
bacterial communities differ among traditional maize landraces". Environmental DNA 4 6 (2022): 1241-1249. https://curis.ku.dk/portal/en/publications/rhizosphere-bacterial-communities-differ-among-traditional-maize-landraces(f7da1a17-786f-49b3-ba90-0382e75465ed).html.
10.1002/edn3.333
- Ryan R. Germain; Shaohong Feng; Guangji Chen; Gary R. Graves; Joseph A. Tobias; Carsten Rahbek; Fumin Lei; et al. "Species-specific
traits mediate avian demographic responses under past climate change". (2022): https://curis.ku.dk/portal/en/publications/speciesspecific-traits-mediate-avian-demographic-responses-under-past-climate-change(f85dd134-35d4-4c25-8139-27d0ba8ad044).html.
10.1101/2022.08.16.504093
- Shyam Gopalakrishnan; S. Sunna Ebenesersdóttir; Inge Kristine Conrad Lundstrøm; Gordon Turner-Walker; Kristjan H. S. Moore;
Pierre Luisi; Ashot Margaryan; et al. "The population genomic legacy of the second plague pandemic". Current Biology
32 21 (2022): 4743-4751.e6. https://curis.ku.dk/portal/en/publications/the-population-genomic-legacy-of-the-second-plague-pandemic(29fe6779-7cdb-49b2-b63e-dbe9b9424e35).html.
10.1016/j.cub.2022.09.023
- Emily L. Cavill; Shyam Gopalakrishnan; Lara Puetz; Ângela M. Ribeiro; Sarah Mak; Rute da Fonseca; George Pacheco; et al. "Conservation
genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum)". Ibis 164 2 (2022): 396-410. https://curis.ku.dk/portal/en/publications/conservation-genomics-of-the-endangered-seychelles-magpierobin-copsychus-sechellarum(9e59fd89-c22b-4ffa-8f6e-1562af78e4b7).html.
10.1111/ibi.13023
- Vera de Ferran; Henrique Vieira Figueiró; Fernanda de Jesus Trindade; Oliver Smith; Mikkel-Holger S. Sinding; Cristine S.
Trinca; Gabriele Zenato Lazzari; et al. "Phylogenomics of the world's otters". Current Biology 32 16 (2022): 3650-3658.e4.
https://curis.ku.dk/portal/en/publications/phylogenomics-of-the-worlds-otters(040373f1-97bf-4353-9cfb-8c477a728f5b).html.
10.1016/j.cub.2022.06.036
- Lara C. Puetz; Tom O. Delmont; Ostaizka Aizpurua; Chunxue Guo; Guojie Zhang; Rebecca Katajamaa; Per Jensen; M. Thomas P. Gilbert.
"Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication". Advanced
Genetics (2021): 2100018-2100018. https://doi.org/10.1002/ggn2.202100018.
10.1002/ggn2.202100018
- Mikkel-Holger S. Sinding; Shyam Gopalakrishnan; Katrine Raundrup; Love Dalén; Jonathan Threlfall; Darwin Tree of Life Barcoding
collective; Wellcome Sanger Institute Tree of Life programme; et al. "The genome sequence of the grey wolf, Canis lupus Linnaeus
1758 [version 1; peer review: 2 approved]". (2021): https://wellcomeopenresearch.org/articles/6-310/v1.
10.12688/wellcomeopenres.17332.1
- D. Azevedo-Silva; J.A. Rasmussen; M. Carneiro; M.T.P. Gilbert; H. Azevedo. "Feasibility of applying shotgun metagenomic analyses
to grapevine leaf, rhizosphere and soil microbiome characterisation". Australian Journal of Grape and Wine Research
(2021): https://doi.org/10.1111/ajgw.12508.
10.1111/ajgw.12508
- Niccolò Alfano; Anisha Dayaram; Jan Axtner; Kyriakos Tsangaras; Marie-Louise Kampmann; Azlan Mohamed; Seth T. Wong; et al.
"Non-invasive surveys of mammalian viruses using environmental DNA". Methods in Ecology and Evolution (2021): https://doi.org/10.1111/2041-210X.13661.
10.1111/2041-210X.13661
- Rosalía Piñeiro; Olivier J. Hardy; Carolina Tovar; Shyam Gopalakrishnan; Filipe Garrett Vieira; M. Thomas P. Gilbert. "Contrasting
genetic signal of recolonization after rainforest fragmentation in African trees with different dispersal abilities". Proceedings
of the National Academy of Sciences 118 27 (2021): https://doi.org/10.1073/pnas.2013979118.
10.1073/pnas.2013979118
- Rosie Drinkwater; Tommaso Jucker; Joshua H. T. Potter; Tom Swinfield; David A. Coomes; Eleanor M. Slade; M. Thomas P. Gilbert;
et al. "Leech blood-meal invertebrate-derived DNA reveals differences in Bornean mammal diversity across habitats". Molecular
Ecology (2021): https://doi.org/10.1111/mec.15724.
10.1111/mec.15724
- Johanna von Seth; Nicolas Dussex; David Díez-del-Molino; Tom van der Valk; Verena E. Kutschera; Marcin Kierczak; Cynthia C.
Steiner; et al. "Genomic insights into the conservation status of the world’s last remaining Sumatran rhinoceros populations".
Nature Communications (2021): https://doi.org/10.1038/s41467-021-22386-8.
10.1038/s41467-021-22386-8
- Ashot Margaryan; Christina Lehmkuhl Noer; Stine Raith Richter; Marlene Elise Restrup; Julie Lee Bülow-Hansen; Frederik Leerhøi;
Emilia Marie Rolander Langkjær; et al. "Mitochondrial genomes of Danish vertebrate species generated for the national DNA
reference database, DNAmark". Environmental DNA (2021): https://doi.org/10.1002/edn3.138.
10.1002/edn3.138
- Pedro Andrade; Kelly A. Dyer; Malgorzata A. Gazda; Pedro M. Araújo; Sandra Afonso; Jacob. A. Rasmussen; Cristiana I. Marques;
et al. "Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates". PLOS
Genetics 17 2 (2021): e1009404-e1009404. https://doi.org/10.1371/journal.pgen.1009404.
10.1371/journal.pgen.1009404
- Amy Bogaard; Robin Allaby; Benjamin S. Arbuckle; Robin Bendrey; Sarah Crowley; Thomas Cucchi; Tim Denham; et al. "Reconsidering
domestication from a process archaeology perspective". World Archaeology (2021): 1-22. https://doi.org/10.1080/00438243.2021.1954990.
10.1080/00438243.2021.1954990
- Jacob Agerbo Rasmussen; Martin Nielsen; Sarah S. T. Mak; Johanna Döring; Franziska Klincke; Shyam Gopalakrishnan; Robert R.
Dunn; Randolf Kauer; Marcus Thomas Pius Gilbert. "eDNA-based biomonitoring at an experimental German vineyard to characterize
how management regimes shape ecosystem diversity". Environmental DNA (2021): https://doi.org/10.1002/edn3.131.
10.1002/edn3.131
- Michael V Westbury; Ross Barnett; Marcela Sandoval-Velasco; Graham Gower; Filipe G Vieira; Marc de Manuel; Anders Johannes
Hansen; et al. "A genomic exploration of the early evolution of extant cats and their sabre-toothed relatives". Open Research
Europe 1 (2021): https://curis.ku.dk/portal/en/publications/a-genomic-exploration-of-the-early-evolution-of-extant-cats-and-their-sabretoothed-relatives(a2318f3e-8fa7-4ac3-96c9-8ef49d575665).html.
10.12688/openreseurope.13104.1
- Arang Rhie; Shane A. McCarthy; Olivier Fedrigo; Joana Damas; Giulio Formenti; Sergey Koren; Marcela Uliano-Silva; et al. "Towards
complete and error-free genome assemblies of all vertebrate species". Nature 592 7856 (2021): 737-746. https://curis.ku.dk/portal/en/publications/towards-complete-and-errorfree-genome-assemblies-of-all-vertebrate-species(029e9e00-3e2a-4679-8a93-8f6a3eccb832).html.
10.1038/s41586-021-03451-0
- Fátima Sánchez Barreiro; Shyam Gopalakrishnan; Jazmín Ramos-Madrigal; Michael V Westbury; Marc de Manuel; Ashot Margaryan;
Marta M. Ciucani; et al. "Historical population declines prompted significant genomic erosion in the northern and southern
white rhinoceros (Ceratotherium simum)". Molecular Ecology 30 23 (2021): 6355-6369. https://curis.ku.dk/portal/en/publications/historical-population-declines-prompted-significant-genomic-erosion-in-the-northern-and-southern-white-rhinoceros-ceratotherium-simum(fbb6465a-ade6-48ea-b652-8be1d5cc1e3b).html.
10.1111/mec.16043
- Michael V Westbury; Ross Barnett; Marcela Sandoval-Velasco; Graham Gower; Filipe G Vieira; Marc de Manuel; Anders Johannes
Hansen; et al. "A genomic exploration of the early evolution of extant cats and their sabre-toothed relatives". Open Research
Europe 1 (2021): https://curis.ku.dk/portal/en/publications/a-genomic-exploration-of-the-early-evolution-of-extant-cats-and-their-sabretoothed-relatives(7efb0a5c-86f4-4886-8b5b-b3a1b65afef5).html.
10.12688/openreseurope.13104.2
- Bastian Fromm; Marcel Tarbier; Oliver Smith; Emilio Marmol-Sanchez; Love Dalen; M Thomas P Gilbert; Marc R. Friedlander. "Ancient
microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation
from the Pleistocene". RNA 27 3 (2021): 324-334. https://curis.ku.dk/portal/en/publications/ancient-microrna-profiles-of-14300yrold-canid-samples-confirm-taxonomic-origin-and-provide-glimpses-into-tissuespecific-gene-regulation-from-the-pleistocene(5a8d53ff-eb79-4f70-827f-e31e5eea5792).html.
10.1261/rna.078410.120
- Cátia Lúcio Pereira; M Thomas P Gilbert; Miguel Bastos Araújo; Miguel Graça Matias. "Fine-tuning biodiversity assessments".
Methods in Ecology and Evolution 12 12 (2021): 2397-2409. https://curis.ku.dk/portal/en/publications/finetuning-biodiversity-assessments(0724d520-ceba-4a39-a39c-9d44f9048615).html.
10.1111/2041-210X.13718
- Andrew D. Foote; Rebecca Hooper; Alana Alexander; Robin W. Baird; Charles Scott Baker; Lisa Ballance; Jay Barlow; et al. "Runs
of homozygosity in killer whale genomes provide a global record of demographic histories". Molecular Ecology 30 23
(2021): 6162-6177. https://curis.ku.dk/portal/en/publications/runs-of-homozygosity-in-killer-whale-genomes-provide-a-global-record-of-demographic-histories(249be6ee-dbe9-4885-8cc7-72fc016055a5).html.
10.1111/mec.16137
- Ann Sofie Olesen; Miyako Kodama; Louise Lohse; Francesc Accensi; Thomas Bruun Rasmussen; Christina M. Lazov; Morten T. Limborg;
et al. "Identification of African swine fever virus transcription within peripheral blood mononuclear cells of acutely infected
pigs". Viruses 13 11 (2021): https://curis.ku.dk/portal/en/publications/identification-of-african-swine-fever-virus-transcription-within-peripheral-blood-mononuclear-cells-of-acutely-infected-pigs(8f8f0bae-77f1-44e1-85c7-f11eca47dab4).html.
10.3390/v13112333
- Mikkel-Holger S. Sinding; Marta M. Ciucani; Jazmín Ramos-Madrigal; Alberto Carmagnini; Jacob Agerbo Rasmussen; Shaohong Feng;
Guangji Chen; et al. "Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos". iScience 24 11 (2021):
https://curis.ku.dk/portal/en/publications/kouprey-bos-sauveli-genomes-unveil-polytomic-origin-of-wild-asian-bos(b65173c8-031a-4e94-9259-d3e71a2c00cd).html.
10.1016/j.isci.2021.103226
- Claudia Fontsere; Peter Frandsen; Jessica Hernandez-Rodriguez; Jonas Niemann; Camilla Hjorth Scharff-Olsen; Dominique Vallet;
Pascaline Le Gouar; et al. "The genetic impact of an Ebola outbreak on a wild gorilla population". BMC Genomics 22
(2021): https://curis.ku.dk/portal/en/publications/the-genetic-impact-of-an-ebola-outbreak-on-a-wild-gorilla-population(8f7e0592-fc30-4901-b9ad-d4b4e406349d).html.
10.1186/s12864-021-08025-y
- Shanlin Liu; Michael V Westbury; Nicolas Dussex; Kieren J. Mitchell; Mikkel-Holger S. Sinding; Peter D. Heintzman; David A.
Duchêne; et al. "Ancient and modern genomes unravel the evolutionary history of the rhinoceros family". Cell 184 19
(2021): 4874-4885.e16. https://curis.ku.dk/portal/en/publications/ancient-and-modern-genomes-unravel-the-evolutionary-history-of-the-rhinoceros-family(f0add686-d63b-4386-b456-1c81a9e21f01).html.
10.1016/j.cell.2021.07.032
- Lucie A. Bergeron; Søren Besenbacher; Jaco Bakker; Jiao Zheng; Panyi Li; George Pacheco; Mikkel-Holger S. Sinding; et al.
"The germline mutational process in rhesus macaque and its implications for phylogenetic dating". GigaScience 10 5
(2021): https://curis.ku.dk/portal/en/publications/the-germline-mutational-process-in-rhesus-macaque-and-its-implications-for-phylogenetic-dating(9619e682-086c-4566-b7fb-1210742da7b9).html.
10.1093/gigascience/giab029
- Chang Liu; Jianbo Gao; Xinxin Cui; Zhipeng Li; Lei Chen; Yuan Yuan; Yaolei Zhang; et al. "A towering genome". Science Advances
7 12 (2021): https://curis.ku.dk/portal/en/publications/a-towering-genome(a478fd5c-ab3c-42e2-bc98-5a708712b862).html.
10.1126/sciadv.abe9459
- Jacob Agerbo Rasmussen; Kasper; David A. Duchêne; Lara Puetz; Tom O. Delmont; Harald Sveier; Louise von Gersdorff Jørgensen;
et al. "Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts". Communications
Biology 4 (2021): https://curis.ku.dk/portal/en/publications/genomeresolved-metagenomics-suggests-a-mutualistic-relationship-between-mycoplasma-and-salmonid-hosts(9bc74391-8154-47fd-a209-4d3db7522657).html.
10.1038/s42003-021-02105-1
- Ostaizka Aizpurua; Lasse Nyholm; Evie Morris; Gloriana Chaverri; L. Gerardo Herrera Montalvo; Jose Juan Flores-Martinez; Aiqing
Lin; et al. "The role of the gut microbiota in the dietary niche expansion of fishing bats". BMC Animal Microbiome
3 (2021): https://curis.ku.dk/portal/en/publications/the-role-of-the-gut-microbiota-in-the-dietary-niche-expansion-of-fishing-bats(37107ed3-7cd0-4546-9c76-038d833573f3).html.
10.1186/s42523-021-00137-w
- Kimmo Sirén; Andrew Millard; Bent Petersen; M Thomas P Gilbert; Martha R. J. Clokie; Thomas Sicheritz-Ponten. "Rapid discovery
of novel prophages using biological feature engineering and machine learning". NAR Genomics and Bioinformatics 3 1
(2021): https://curis.ku.dk/portal/en/publications/rapid-discovery-of-novel-prophages-using-biological-feature-engineering-and-machine-learning(0567e549-108a-4d18-ba41-bcf402ba3776).html.
10.1093/nargab/lqaa109
- Tatiana R. Feuerborn; Alberto Carmagnini; Robert J. Losey; Tatiana Nomokonova; Arthur Askeyev; Igor Askeyev; Oleg Askeyev;
et al. "Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal". Proceedings
of the National Academy of Sciences of the United States of America 118 39 (2021): https://curis.ku.dk/portal/en/publications/modern-siberian-dog-ancestry-was-shaped-by-several-thousand-years-of-eurasianwide-trade-and-human-dispersal(3619d889-acb8-450a-aa8d-a8e760f91f96).html.
10.1073/pnas.2100338118
- Marta Maria Ciucani; Julie Kragmose Jensen; Mikkel-Holger S. Sinding; Oliver Smith; Saverio Bartolini Lucenti; Erika Rosengren;
Lorenzo Rook; et al. "Evolutionary history of the extinct Sardinian dhole". Current Biology 31 24 (2021): 5571-5579.e6.
https://curis.ku.dk/portal/en/publications/evolutionary-history-of-the-extinct-sardinian-dhole(3caba6e4-012e-416b-a467-6c38fd7bea03).html.
10.1016/j.cub.2021.09.059
- Jonas Niemann; Shyam Gopalakrishnan; Nobuyuki Yamaguchi; Jazmín Ramos-Madrigal; Nathan Wales; M Thomas P Gilbert; Mikkel-Holger
S. Sinding. "Extended survival of Pleistocene Siberian wolves into the early 20th century on the island of Honshu". iScience
24 (2021): https://curis.ku.dk/portal/en/publications/extended-survival-of-pleistocene-siberian-wolves-into-the-early-20th-century-on-the-island-of-honshu(7d7f1b41-70bb-4200-9be4-60413b8eac49).html.
10.1016/j.isci.2020.101904
- Davide Bozzi; Jacob Agerbo Rasmussen; Christian Carøe; Harald Sveier; Kristian Nordøy; M Thomas P Gilbert; Morten T. Limborg.
"Salmon gut microbiota correlates with disease infection status". BMC Animal Microbiome 3 1 (2021): https://curis.ku.dk/portal/en/publications/salmon-gut-microbiota-correlates-with-disease-infection-status(18fa85fb-dfd3-454f-ab8a-d9b6fac8d3c2).html.
10.1186/s42523-021-00096-2
- Angela R. Perri; Kieren J. Mitchell; Alice Mouton; Sandra Alvarez-Carretero; Ardern Hulme-Beaman; James Haile; Alexandra Jamieson;
et al. "Dire wolves were the last of an ancient New World canid lineage". Nature 591 (2021): 87-91. https://curis.ku.dk/portal/en/publications/dire-wolves-were-the-last-of-an-ancient-new-world-canid-lineage(b3dbbb54-63e4-4e2e-9e0b-a21a6437cd24).html.
10.1038/s41586-020-03082-x
- Melanie Kirch; Anders Romundset; M Thomas P Gilbert; Felicity C. Jones; Andrew D. Foote. "Ancient and modern stickleback genomes
reveal the demographic constraints on adaptation". Current Biology 31 9 (2021): 2027-2036.e8. https://curis.ku.dk/portal/en/publications/ancient-and-modern-stickleback-genomes-reveal-the-demographic-constraints-on-adaptation(7ae270d3-e22c-4ac2-bebd-4b0a25d78773).html.
10.1016/j.cub.2021.02.027
- Angelo Poliseno; Alvaro Altuna; Lara Puetz; Sarah Mak; Pilar Rios; Emily Petroni; Catherine S. McFadden; Martin Sørensen;
M Thomas P Gilbert. "An integrated morphological-molecular approach reveals new insights on the systematics of the octocoral
Telestula humilis (Thomson, 1927) (Octocorallia". Invertebrate Systematics 35 3 (2021): 261-281. https://curis.ku.dk/portal/en/publications/an-integrated-morphologicalmolecular-approach-reveals-new-insights-on-the-systematics-of-the-octocoral-telestula-humilis-thomson-1927-octocorallia(4a4b5868-11d1-4d20-b8c0-d33f55f746bb).html.
10.1071/IS20009
- Filipe Garrett Vieira; José Alfredo Samaniego Castruita; M. Thomas P. Gilbert. "Using in silico predicted ancestral genomes
to improve the efficiency of paleogenome reconstruction". Ecology and Evolution (2020): https://doi.org/10.1002/ece3.6925.
10.1002/ece3.6925
- Brooke L Whitelaw; Ira R Cooke; Julian Finn; Rute R da Fonseca; Elena A Ritschard; M T P Gilbert; Oleg Simakov; Jan M Strugnell.
"Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss". GigaScience
(2020): https://doi.org/10.1093/gigascience/giaa120.
10.1093/gigascience/giaa120
- Damien A. Fordham; Stephen T. Jackson; Stuart C. Brown; Brian Huntley; Barry W. Brook; Dorthe Dahl-Jensen; M. Thomas P. Gilbert;
et al. "Using paleo-archives to safeguard biodiversity under climate change". Science (2020): https://doi.org/10.1126/science.abc5654.
10.1126/science.abc5654
- Puteri Nur Syahzanani Jahari; Shahfiz Mohd Azman; Kaviarasu Munian; Nor Hazwani Ahmad Ruzman; Mohd Shahir Shamsir; Stine R.
Richter; M. Thomas P. Gilbert; Faezah Mohd Salleh. "Molecular identification and phylogenetic analysis of a Callosciurus notatus
complete mitogenome from Peninsular Malaysia". Mitochondrial DNA Part B 5 3 (2020): 3004-3006. https://doi.org/10.1080/23802359.2020.1797583.
10.1080/23802359.2020.1797583
- Kristine Bohmann; Siavash Mirarab; Vineet Bafna; M. Thomas P. Gilbert. "Beyond DNA barcoding: The unrealized potential of
genome skim data in sample identification". Molecular Ecology (2020): https://doi.org/10.1111/mec.15507.
10.1111/mec.15507
- Patrick Denis Browne; Tue Kjærgaard Nielsen; Witold Kot; Anni Aggerholm; M Thomas P Gilbert; Lara Puetz; Morten Rasmussen;
Athanasios Zervas; Lars Hestbjerg Hansen. "GC bias affects genomic and metagenomic reconstructions, underrepresenting GC-poor
organisms". GigaScience (2020): https://doi.org/10.1093/gigascience/giaa008.
10.1093/gigascience/giaa008
- George Pacheco; Hein van Grouw; Michael D. Shapiro; M Thomas P Gilbert; Filipe G Vieira. "Darwin's Fancy Revised: An Updated
Understanding of the Genomic Constitution of Pigeon Breeds". Genome Biology and Evolution 12 3 (2020): 136-150. https://curis.ku.dk/portal/en/publications/darwins-fancy-revised-an-updated-understanding-of-the-genomic-constitution-of-pigeon-breeds(3476e7d1-e3f5-4333-879a-ecb6f6dddbb9).html.
10.1093/gbe/evaa027
- Shaohong Feng; Josefin Stiller; Yuan Deng; Joel Armstrong; Qi Fang; Andrew Hart Reeve; Duo Xie; et al. "Dense sampling of
bird diversity increases power of comparative genomics". Nature 587 7833 (2020): 252-257. https://curis.ku.dk/portal/en/publications/dense-sampling-of-bird-diversity-increases-power-of-comparative-genomics(ab1eb48d-4349-4a0b-93a6-337836a725e0).html.
10.1038/s41586-020-2873-9
- Liisa Loog; Olaf Thalmann; Mikkel-Holger S. Sinding; Verena J. Schuenemann; Angela Perri; Mietje Germonpré; Hervé Bocherens;
et al. "Ancient DNA suggests modern wolves trace their origin to a Late Pleistocene expansion from Beringia". Molecular
Ecology 29 9 (2020): 1596-1610. https://curis.ku.dk/portal/en/publications/ancient-dna-suggests-modern-wolves-trace-their-origin-to-a-late-pleistocene-expansion-from-beringia(d81cbae9-6e82-45f0-b6ce-ea49adcd3373).html.
10.1111/mec.15329
- Christina Lynggaard; Douglas W. Yu; Guilherme Oliveira; Cecilio F. Caldeira; Silvio J. Ramos; Martin R. Ellegaard; M Thomas
P Gilbert; Markus Gastauer; Kristine Bohmann. "DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show
Ecological Succession Towards Undisturbed Reference Sites". Frontiers in Ecology and Evolution 8 (2020): https://curis.ku.dk/portal/en/publications/dnabased-arthropod-diversity-assessment-in-amazonian-iron-mine-lands-show-ecological-succession-towards-undisturbed-reference-sites(bf5a5765-d4c1-49ac-8ad4-9b52026aff39).html.
10.3389/fevo.2020.590976
- Laurent Bouby; Nathan Wales; Mindia Jalabadze; Nana Rusishvili; Vincent Bonhomme; Jazmín Ramos-Madrigal; Allowen Evin; et
al. "Tracking the history of grapevine cultivation in Georgia by combining geometric morphometrics and ancient DNA". Vegetation
History and Archaeobotany 30 (2020): 63-76. https://curis.ku.dk/portal/en/publications/tracking-the-history-of-grapevine-cultivation-in-georgia-by-combining-geometric-morphometrics-and-ancient-dna(efb51584-7fd7-4674-adfe-f1c0ef5fae68).html.
10.1007/s00334-020-00803-0
- Ashot Margaryan; Mikkel-Holger S. Sinding; L. I.U. Shanlin; Filipe G Vieira; Yvonne L. Chan; Senthilvel K.S.S. Nathan; Yoshan
Moodley; Michael W. Bruford; M Thomas P Gilbert. "Recent mitochondrial lineage extinction in the critically endangered Javan
rhinoceros". Zoological Journal of the Linnean Society 190 1 (2020): 372-383. https://curis.ku.dk/portal/en/publications/recent-mitochondrial-lineage-extinction-in-the-critically-endangered-javan-rhinoceros(c629373d-c95a-460b-b0be-14e41fea5216).html.
10.1093/zoolinnean/zlaa004
- Marcela Sandoval-Velasco; Juan Antonio Rodríguez; Cynthia Perez Estrada; Guojie Zhang; Erez Lieberman Aiden; Marc A. Marti-Renom;
M Thomas P Gilbert; Oliver Smith. "Hi-C chromosome conformation capture sequencing of avian genomes using the BGISEQ-500 platform".
GigaScience 9 8 (2020): https://curis.ku.dk/portal/en/publications/hic-chromosome-conformation-capture-sequencing-of-avian-genomes-using-the-bgiseq500-platform(ccde2a65-2c2d-42da-9803-2d250c698e4f).html.
10.1093/gigascience/giaa087
- Edana Lord; Nicolas Dussex; Marcin Kierczak; David Díez-del-Molino; Oliver A. Ryder; David W. G. Stanton; M Thomas P Gilbert;
et al. "Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros". Current Biology
30 19 (2020): 3871--3879, e1--e7-3871--3879, e1--e7. https://curis.ku.dk/portal/en/publications/preextinction-demographic-stability-and-genomic-signatures-of-adaptation-in-the-woolly-rhinoceros(6ce2f29b-f0d4-4a55-b317-baec8d158e88).html.
10.1016/j.cub.2020.07.046
- Antton Alberdi; Orly Razgour; Ostaizka Aizpurua; Roberto Novella-Fernandez; Joxerra Aihartza; Ivana Budinski; Inazio Garin;
et al. "DNA metabarcoding and spatial modelling link diet diversification with distribution homogeneity in European bats".
Nature Communications 11 (2020): https://curis.ku.dk/portal/en/publications/dna-metabarcoding-and-spatial-modelling-link-diet-diversification-with-distribution-homogeneity-in-european-bats(6a944c0d-cb2e-4c16-91f8-740333dd7046).html.
10.1038/s41467-020-14961-2
- Jazmín Ramos-Madrigal; Mikkel-Holger S Sinding; Christian Carøe; Sarah Mak; Jonas Niemann; José Alfredo Samaniego Castruita;
Sergey Fedorov; et al. "Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages". Current biology
: CB 31 (2020): 198-206. https://curis.ku.dk/portal/en/publications/genomes-of-pleistocene-siberian-wolves-uncover-multiple-extinct-wolf-lineages(bd1d1986-2969-4357-9e97-fa190c7b83f7).html.
10.1016/j.cub.2020.10.002
- Rute da Fonseca; Alvarina Couto; Andre M. Machado; Brona Brejova; Carolin B. Albertin; Filipe Silva; Paul Gardner; et al.
"A draft genome sequence of the elusive giant squid, Architeuthis dux". GigaScience 9 1 (2020): https://curis.ku.dk/portal/en/publications/a-draft-genome-sequence-of-the-elusive-giant-squid-architeuthis-dux(00055b06-a920-424b-abbc-4f81dc69e67d).html.
10.1093/gigascience/giz152
- Ross Barnett; Michael V Westbury; Marcela Sandoval-Velasco; Filipe G Vieira; Sungwon Jeon; Grant Zazula; Michael D. Martin;
et al. "Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens". Current
Biology 30 (2020): 5018-5025. https://curis.ku.dk/portal/en/publications/genomic-adaptations-and-evolutionary-history-of-the-extinct-scimitartoothed-cat-homotherium-latidens(68e3bc2d-29b8-47d5-982f-a2550203ad9c).html.
10.1016/j.cub.2020.09.051
- Mikkel-Holger S. Sinding; Shyam Gopalakrishnan; Jazmín Ramos-Madrigal; Marc de Manuel; Vladimir V. Pitulko; Lukas Kuderna;
Tatiana R. Feuerborn; et al. "Arctic-adapted dogs emerged at the Pleistocene-Holocene transition". Science (New York, N.Y.)
368 6498 (2020): 1495-1499. https://curis.ku.dk/portal/en/publications/arcticadapted-dogs-emerged-at-the-pleistoceneholocene-transition(8186336c-7b2f-4f76-bfb9-14630e6c34b5).html.
10.1126/science.aaz8599
- Marc de Manuel; Ross Barnett; Marcela Sandoval-Velasco; Nobuyuki Yamaguchi; Filipe G Vieira; M. Lisandra Zepeda Mendoza; Shiping
Liu; et al. "The evolutionary history of extinct and living lions". Proceedings of the National Academy of Sciences of
the United States of America 117 20 (2020): 10927-10934. https://curis.ku.dk/portal/en/publications/the-evolutionary-history-of-extinct-and-living-lions(f95a8fa8-707b-4345-bcc5-ade5ae7afc31).html.
10.1073/pnas.1919423117
- Pere Gelabert; Marcela Sandoval-Velasco; Aitor Serres; Marc de Manuel; Pere Renom; Ashot Margaryan; Josefin Stiller; et al.
"Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet". Current Biology
30 1 (2020): 108--114, e1--e5-108--114, e1--e5. https://curis.ku.dk/portal/en/publications/evolutionary-history-genomic-adaptation-to-toxic-diet-and-extinction-of-the-carolina-parakeet(3229ab3a-3294-4a4c-ac95-2e0e0c830295).html.
10.1016/j.cub.2019.10.066
- Anne Marie Høier Eriksen; Lara Puetz; Carolina Rocha; Tue Nielsen; Lars Hestbjerg Hansen; M Thomas P Gilbert. "Releasing the
microbes from old bones". STAR: Science & Technology of Archaeological Research 6 1 (2020): 1-15. https://curis.ku.dk/portal/en/publications/releasing-the-microbes-from-old-bones(86483938-a44e-4014-b4fb-f3d3b56c91a0).html.
10.1080/20548923.2020.1738115
- Puteri Nur Syahzanani Jahari; Nur Fatihah Abdul Malik; Mohd Shahir Shamsir; M Thomas P Gilbert; Faezah Mohd Salleh. "The first
complete mitochondrial genome data of Hippocampus kuda originating from Malaysia". Data in Brief 31 (2020): https://curis.ku.dk/portal/en/publications/the-first-complete-mitochondrial-genome-data-of-hippocampus-kuda-originating-from-malaysia(1abba42f-06cf-440e-8a71-2e8dd7f7c6f5).html.
10.1016/j.dib.2020.105721
- Evon R. Hekkala; Matthew L. Aardema; Apurva Narechania; George Amato; Salima Ikram; Matthew H. Shirley; Kent A. Vliet; et
al. "The secrets of Sobek - A crocodile mummy mitogenome from ancient Egypt". Journal of Archaeological Science: Reports
33 (2020): 1-10. https://curis.ku.dk/portal/en/publications/the-secrets-of-sobek--a-crocodile-mummy-mitogenome-from-ancient-egypt(2bd2630b-7e65-4cd9-87a3-ef02a0cc7fd6).html.
10.1016/j.jasrep.2020.102483
- Zachary J Nolen; Burcin Yildirim; Iker Irisarri; Shanlin Liu; Clara Groot Crego; Daniel Buchvaldt Amby; Frieder Mayer; M Thomas
P Gilbert; Ricardo J Pereira. "Historical isolation facilitates species radiation by sexual selection". Molecular Ecology
29 24 (2020): 4985-5002. https://curis.ku.dk/portal/en/publications/historical-isolation-facilitates-species-radiation-by-sexual-selection(d961f25b-d625-48bc-b0f1-cce5360a68f9).html.
10.1111/mec.15695
- Ashot Margaryan; Daniel J Lawson; Martin Sikora; Fernando Racimo; Simon Rasmussen; Ida Moltke; Lara M Cassidy; et al. "Population
genomics of the Viking world". Nature 585 7825 (2020): 390-396. https://curis.ku.dk/portal/en/publications/population-genomics-of-the-viking-world(086ea951-1ff7-4440-8203-9f99493d1404).html.
10.1038/s41586-020-2688-8
- Anne Marie Høier Eriksen; Tue Nielsen; Henning Matthiesen; Christian Carøe; Lars Hestbjerg Hansen; David John Gregory; Gordon
Turner-Walker; Matthew Collins; M Thomas P Gilbert. "Bone biodeterioration - The effect of marine and terrestrial depositional
environments on early diagenesis and bone bacterial community". PLoS ONE 15 10 October (2020): https://curis.ku.dk/portal/en/publications/bone-biodeterioration--the-effect-of-marine-and-terrestrial-depositional-environments-on-early-diagenesis-and-bone-bacterial-community(15ce0dda-fd9f-476c-8499-47d50252a4a0).html.
10.1371/journal.pone.0240512
- Nerivania Nunes Godeiro; George Pacheco; Shanlin Liu; Nikolas Gioia Cipola; Waldir Miron Berbel-Filho; Feng Zhang; M Thomas
P Gilbert; Bruno Cavalcante Bellini. "Phylogeny of Neotropical Seirinae (Collembola, Entomobryidae) based on mitochondrial
genomes". Zoologica Scripta 49 3 (2020): 329-339. https://curis.ku.dk/portal/en/publications/phylogeny-of-neotropical-seirinae-collembola-entomobryidae-based-on-mitochondrial-genomes(eee89001-1d83-4add-9aa8-094edf7248a1).html.
10.1111/zsc.12408
- Lucy van Dorp; Pere Gelabert; Adrien Rieux; Marc de Manuel; Toni de-Dios; Shyam Gopalakrishnan; Christian Caroe; et al. "Plasmodium
vivax Malaria Viewed through the Lens of an Eradicated European Strain". MOLECULAR BIOLOGY AND EVOLUTION 37 3 (2020):
773-785. https://curis.ku.dk/portal/en/publications/plasmodium-vivax-malaria-viewed-through-the-lens-of-an-eradicated-european-strain(715f9410-d509-486e-b416-667b4e718247).html.
10.1093/molbev/msz264
- Anna Fotakis; Sean D. Denham; Meaghan Mackie; Miren Iraeta Orbegozo; Dorothea Mylopotamitaki; Shyam Gopalakrishnan; Thomas
Sicheritz-Ponten; et al. "Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus". Philosophical
Transactions of the Royal Society B: Biological Sciences 375 1812 (2020): https://curis.ku.dk/portal/en/publications/multiomic-detection-of-mycobacterium-leprae-in-archaeological-human-dental-calculus(d66c8ed2-d090-469e-9300-009996b1a971).html.
10.1098/rstb.2019.0584
- Henrik Devitt Møller; Jazmín Ramos-Madrigal; Inigo Prada-Luengo; M Thomas P Gilbert; Birgitte Regenberg. "Near-Random Distribution
of Chromosome-Derived Circular DNA in the Condensed Genome of Pigeons and the Larger, More Repeat-Rich Human Genome". Genome
Biology and Evolution 12 2 (2020): 3762-3777. https://curis.ku.dk/portal/en/publications/nearrandom-distribution-of-chromosomederived-circular-dna-in-the-condensed-genome-of-pigeons-and-the-larger-more-repeatrich-human-genome(96967563-1971-41b2-bfaf-62452b1975c9).html.
10.1093/gbe/evz281
- Rhys Jones; Marcela Sandoval Velasco; Llinos G. Harris; Sue Morgan; Mark Temple; Michael C. Ruddy; Rhian Williams; et al.
"Resolving a clinical tuberculosis outbreak using palaeogenomic genome reconstruction methodologies". Tuberculosis
119 (2019): https://curis.ku.dk/portal/en/publications/resolving-a-clinical-tuberculosis-outbreak-using-palaeogenomic-genome-reconstruction-methodologies(53b82241-92a0-4962-8ead-76865d9295ce).html.
10.1016/j.tube.2019.101865
- Rudy C. Nunes; Nerivânia N. Godeiro; George Pacheco; Shanlin Liu; Marcus Thomas P. Gilbert; Fernando Alvarez-Valin; Feng Zhang;
Bruno C. Bellini. "The discovery of Neotropical Lepidosira (Collembola, Entomobryidae) and its systematic position". Zoologica
Scripta (2019): https://doi.org/10.1111/zsc.12377.
10.1111/zsc.12377
- Oliver Smith; Chris Tyler-Smith; Glenn Dunshea; Mikkel-Holger S. Sinding; Sergey Fedorov; Mietje Germonpre; Hervé Bocherens;
M. T. P. Gilbert. "Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome
survival". PLOS Biology (2019): https://doi.org/10.1371/journal.pbio.3000166.
10.1371/journal.pbio.3000166
- Martin Nielsen; M. Thomas P. Gilbert; Thomas Pape; Kristine Bohmann. "A simplified DNA extraction protocol for unsorted bulk
arthropod samples that maintains exoskeletal integrity". Environmental DNA (2019): https://doi.org/10.1002/edn3.16.
10.1002/edn3.16
- Toni de-Dios; Lucy van Dorp; Pere Gelabert; Christian Carøe; Marcela Sandoval Velasco; Rosa Fregel; Raül Escosa; et al. "Genetic
affinities of an eradicated European Plasmodium falciparum strain". Microbial Genomics 5 9 (2019): https://curis.ku.dk/portal/en/publications/genetic-affinities-of-an-eradicated-european-plasmodium-falciparum-strain(a7d4ec06-b885-4b46-acda-ee663ace4d34).html.
10.1099/mgen.0.000289
- Zeshan Lin; Lei Chen; Xianqing Chen; Yingbin Zhong; Yue Yang; Wenhao Xia; Chang Liu; et al. "Biological adaptations in the
Arctic cervid, the reindeer (Rangifer tarandus)". Science 364 6446 (2019): 1154-+. https://curis.ku.dk/portal/en/publications/biological-adaptations-in-the-arctic-cervid-the-reindeer-rangifer-tarandus(3fc67bd4-1e59-40f9-bbfa-4c2f0586a712).html.
10.1126/science.aav6312
- Carly Ameen; Tatiana R Feuerborn; Sarah K Brown; Anna Linderholm; Ardern Hulme-Beaman; Ophélie Lebrasseur; Mikkel-Holger S.
Sinding; et al. "Specialized sledge dogs accompanied Inuit dispersal across the North American Arctic". Proceedings. Biological
sciences 286 1916 (2019): 20191929-20191929. https://curis.ku.dk/portal/en/publications/specialized-sledge-dogs-accompanied-inuit-dispersal-across-the-north-american-arctic(17e28f5c-08f9-448a-8fcf-b882d9e5cb9e).html.
10.1098/rspb.2019.1929
- Hailin Pan; Theresa L. Cole; Xupeng Bi; Miaoquan Fang; Chengran Zhou; Zhengtao Yang; Daniel T. Ksepka; et al. "High-coverage
genomes to elucidate the evolution of penguins". GigaScience 8 9 (2019): 1-17. https://curis.ku.dk/portal/en/publications/highcoverage-genomes-to-elucidate-the-evolution-of-penguins(beb5fbb5-ce52-4739-b288-8c24a52c236d).html.
10.1093/gigascience/giz117
- Enrico Cappellini; Frido Welker; Luca Pandolfi; Jazmín Ramos-Madrigal; Diana Samodova; Patrick Leopold Rüther; Anna Fotakis;
et al. "Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny". Nature 574 7776 (2019):
103-107. https://curis.ku.dk/portal/en/publications/early-pleistocene-enamel-proteome-from-dmanisi-resolves-stephanorhinus-phylogeny(39855a59-09b3-47be-92ab-0db41d3c1196).html.
10.1038/s41586-019-1555-y
- Imran Khan; Emanuel Maldonado; Liliana Silva; Daniela Almeida; Warren E. Johnson; Stephen J. O'Brien; Guojie Zhang; et al.
"The Vertebrate TLR Supergene Family Evolved Dynamically by Gene Gain/Loss and Positive Selection Revealing a Host-Pathogen
Arms Race in Birds". Diversity 11 8 (2019): https://curis.ku.dk/portal/en/publications/the-vertebrate-tlr-supergene-family-evolved-dynamically-by-gene-gainloss-and-positive-selection-revealing-a-hostpathogen-arms-race-in-birds(3a4ea21d-eb41-4b7b-abf1-aecc8396eed7).html.
10.3390/d11080131
- Ângela M. Ribeiro; Ben Smit; M Thomas P Gilbert. "31° South: Dietary niche of an arid-zone endemic passerine". Environmental
Engineering 1 2 (2019): 109-118. https://curis.ku.dk/portal/en/publications/31-south-dietary-niche-of-an-aridzone-endemic-passerine(08fa2efc-ab4b-4a29-80bf-327fb7358d28).html.
10.1002/edn3.13
- Jazmín Ramos-Madrigal; Anne Kathrine Runge; Laurent Bouby; Thierry Lacombe; José Alfredo Samaniego Castruita; Anne-Françoise
Adam-Blondon; Isabel Figueiral; et al. "Palaeogenomic insights into the origins of French grapevine diversity". Nature
Plants 5 6 (2019): 595-603. https://curis.ku.dk/portal/en/publications/palaeogenomic-insights-into-the-origins-of-french-grapevine-diversity(c8ff8679-ffbc-4525-8312-0036db3ae9b5).html.
10.1038/s41477-019-0437-5
- Jessica E. Thomas; Gary R. Carvalho; James Haile; Nicolas J. Rawlence; Michael D. Martin; Simon Y. W. Ho; Arnor P. Sigfusson;
et al. "Demographic reconstruction from ancient DNA supports rapid extinction of the great auk". eLife 8 (2019): https://curis.ku.dk/portal/en/publications/demographic-reconstruction-from-ancient-dna-supports-rapid-extinction-of-the-great-auk(4a446f50-1769-472c-b2a5-1e1d0aa6c98c).html.
10.7554/eLife.47509
- Mathis Hildonen; Miyako Kodama; Lara Puetz; M Thomas P Gilbert; Morten T. Limborg. "A comparison of storage methods for gut
microbiome studies in teleosts". Journal of Microbiological Methods 160 (2019): 42-48. https://curis.ku.dk/portal/en/publications/a-comparison-of-storage-methods-for-gut-microbiome-studies-in-teleosts(3eaed4e2-1cc8-455f-ac07-674d0d5aa5b2).html.
10.1016/j.mimet.2019.03.010
- "Parallel adaptation of rabbit populations to myxoma virus". Science (New York, N.Y.) (2019): https://doi.org/10.1126/science.aau7285.
10.1126/science.aau7285
- "The Genomic Footprints of the Fall and Recovery of the Crested Ibis". Current biology : CB (2019): http://europepmc.org/articles/PMC6345625.
10.1016/j.cub.2018.12.008
- "Mitogenomic evidence of close relationships between New Zealand's extinct giant raptors and small-sized Australian sister-taxa".
Molecular phylogenetics and evolution (2019): https://doi.org/10.1016/j.ympev.2019.01.026.
10.1016/j.ympev.2019.01.026
- Rosalia Pineiro; Olivier J. Hardy; Carolina Tovar; Shyam Gopalakrishnan; Filipe G Vieira; M Thomas P Gilbert. "Contrasting
dates of rainforest fragmentation in Africa inferred from trees with different dispersal abilities". bioRxiv (2019):
https://curis.ku.dk/portal/en/publications/contrasting-dates-of-rainforest-fragmentation-in-africa-inferred-from-trees-with-different-dispersal-abilities(889e80ee-150c-4c28-bffb-6e23e682de47).html.
10.1101/811463
- "Ancient DNA reveals the timing and persistence of organellar genetic bottlenecks over 3,000 years of sunflower domestication
and improvement". Evolutionary applications (2019): http://europepmc.org/articles/PMC6304678.
10.1111/eva.12594
- "Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North
Borneo". Molecular ecology resources (2019): https://doi.org/10.1111/1755-0998.12943.
10.1111/1755-0998.12943
- "Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin".
Molecular ecology (2019): https://doi.org/10.1111/mec.14860.
10.1111/mec.14860
- Laurent A. F. Frantz; James Haile; Audrey T. Lin; Amelie Scheu; Christina Geoerg; Norbert Benecke; Michelle Alexander; et
al. "Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe". Proceedings of the National
Academy of Sciences of the United States of America 116 35 (2019): 17231-17238. https://curis.ku.dk/portal/en/publications/ancient-pigs-reveal-a-nearcomplete-genomic-turnover-following-their-introduction-to-europe(cfb1a5c9-4cf9-4ef9-851f-0dfa76e0538a).html.
10.1073/pnas.1901169116
- Kimmo Sirén; Sarah Mak; Chrats Melkonian; Christian Carøe; Jan Hendrik Swiegers; Douwe Molenaar; Ulrich Fischer; M Thomas
P Gilbert. "Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation
of Riesling Must". Frontiers in Microbiology 10 (2019): https://curis.ku.dk/portal/en/publications/taxonomic-and-functional-characterization-of-the-microbial-community-during-spontaneous-in-vitro-fermentation-of-riesling-must(18fce747-cd29-431e-9362-afcf8e468afc).html.
10.3389/fmicb.2019.00697
- Theis Z. T. Jensen; Jonas Niemann; Katrine Højholt Iversen; Anna Fotakis; Shyam Gopalakrishnan; Åshild J. Vågene; Mikkel Winther
Pedersen; et al. "A 5700 year-old human genome and oral microbiome from chewed birch pitch". Nature Communications
10 (2019): https://curis.ku.dk/portal/en/publications/a-5700-yearold-human-genome-and-oral-microbiome-from-chewed-birch-pitch(06045404-031d-4c28-8b6a-826db0cf6057).html.
10.1038/s41467-019-13549-9
- Ida Nordang Kieler; Melania Osto; Leoni Hugentobler; Lara Puetz; M Thomas P Gilbert; Torben Hansen; Oluf Pedersen; et al.
"Diabetic cats have decreased gut microbial diversity and a lack of butyrate producing bacteria". Scientific Reports
9 (2019): 1-13. https://curis.ku.dk/portal/en/publications/diabetic-cats-have-decreased-gut-microbial-diversity-and-a-lack-of-butyrate-producing-bacteria(be22a0d1-5b55-4c17-9308-578edf6d289d).html.
10.1038/s41598-019-41195-0
- Ângela M. Ribeiro; Lara Puetz; Nicholas B. Pattinson; Love Dalén; Yuan Deng; Guojie Zhang; Rute da Fonseca; Ben Smit; M Thomas
P Gilbert. "31º South". Molecular Ecology 28 16 (2019): 3709-3721. https://curis.ku.dk/portal/en/publications/31-south(09dd2b7e-d2ce-4ff8-8b65-31e065a11bd0).html.
10.1111/mec.15176
- Shahab Sarmashghi; Kristine Bohmann; M Thomas P Gilbert; Vineet Bafna; Siavash Mirarab. "Skmer: assembly-free and alignment-free
sample identification using genome skims". Genome Biology 20 (2019): https://curis.ku.dk/portal/en/publications/skmer-assemblyfree-and-alignmentfree-sample-identification-using-genome-skims(78c9f1ec-b1cc-4884-8c1e-0d1fc7a1ade1).html.
10.1186/s13059-019-1632-4
- Andrew D. Foote; Michael D. Martin; Marie Louis; George Pacheco; Kelly M Robertson; Mikkel-Holger S Sinding; Ana R Amaral;
et al. "Killer whale genomes reveal a complex history of recurrent admixture and vicariance". Molecular Ecology 28
14 (2019): 3427-3444. https://curis.ku.dk/portal/en/publications/killer-whale-genomes-reveal-a-complex-history-of-recurrent-admixture-and-vicariance(757880ff-aac5-479e-8d3d-3165f994ab6d).html.
10.1111/mec.15099
- Milaja Nykänen; Kristin Kaschner; Willy Dabin; Andrew Brownlow; Nicholas J Davison; Rob Deaville; Cristina Garilao; et al.
"Postglacial Colonization of Northern Coastal Habitat by Bottlenose Dolphins". The Journal of Heredity 110 6 (2019):
662-674. https://curis.ku.dk/portal/en/publications/postglacial-colonization-of-northern-coastal-habitat-by-bottlenose-dolphins(43bd10ee-d4bd-40b1-8ee9-d8017c706a42).html.
10.1093/jhered/esz039
- Lei Chen; Qiang Qin; Yu Jiang; Kun Wang; Zeshan Lin; Zhipeng Li; Faysal Bibi; et al. "Large-scale ruminant genome sequencing
provides insights into their evolution and distinct traits". Science 364 6446 (2019): 1152---1152--. https://curis.ku.dk/portal/en/publications/largescale-ruminant-genome-sequencing-provides-insights-into-their-evolution-and-distinct-traits(a99299d7-12c6-4a62-86a0-bb5e9ecc60af).html.
10.1126/science.aav6202
- Rui Borges; João Fonseca; Cidália Gomes; Warren E. Johnson; Stephen J. O'Brien; Guojie Zhang; M Thomas P Gilbert; Erich D.
Jarvis; Agostinho Antunes. "Avian Binocularity and Adaptation to Nocturnal Environments". Genome Biology and Evolution
11 8 (2019): 2244-2255. https://curis.ku.dk/portal/en/publications/avian-binocularity-and-adaptation-to-nocturnal-environments(502f0329-d014-4433-a4fd-4c1ddc6fcf30).html.
10.1093/gbe/evz111
- Maiken Hemme Bro-Jørgensen; Christian Carøe; Filipe G Vieira; Sofia Nestor; Ann Hallström; Kristian M. Gregersen; Vivian Etting;
M Thomas P Gilbert; Mikkel-Holger S. Sinding. "Ancient DNA analysis of Scandinavian medieval drinking horns and the horn of
the last aurochs bull". Journal of Archaeological Science 99 (2018): 47-54. https://curis.ku.dk/portal/en/publications/ancient-dna-analysis-of-scandinavian-medieval-drinking-horns-and-the-horn-of-the-last-aurochs-bull(7aa06b6f-c28b-4ffe-8d57-7b1b5cbe01a3).html.
10.1016/j.jas.2018.09.001
- Lee Koren; Devorah Matas; Patrícia Pecnerová; Love Dalén; Alexei Tikhonov; M Thomas P Gilbert; Katherine E. Wynne-edwards;
Eli Geffen. "Testosterone in ancient hair from an extinct species". Special Papers in Palaeontology 61 6 (2018): 797-802.
https://curis.ku.dk/portal/en/publications/testosterone-in-ancient-hair-from-an-extinct-species(77c391ef-532e-43cc-8ecb-81640da8aef1).html.
10.1111/pala.2018.61.issue-6
- Ross Barnett; Mikkel-Holder S. Sinding; Filipe G Vieira; Marie Lisandra Zepeda Mendoza; Matthieu Bonnet; Alessandro Araldi;
Ivonne Kienast; et al. "No longer locally extinct? Tracing the origins of a lion (Panthera leo) living in Gabon". Conservation
Genetics 19 3 (2018): 611-618. https://curis.ku.dk/portal/en/publications/no-longer-locally-extinct-tracing-the-origins-of-a-lion-panthera-leo-living-in-gabon(92138cf1-2d75-4aee-b4fc-4a852319eaf5).html.
10.1007/s10592-017-1039-2
- Christian Carøe; Shyam Gopalakrishnan; Lasse Vinner; Sarah Mak; Mikkel-Holger S. Sinding; Jose A. Samaniego; Nathan Wales;
Thomas Sicheritz-Ponten; M Thomas P Gilbert. "Single-tube library preparation for degraded DNA". Methods in Ecology and
Evolution 9 2 (2018): 410-419. https://curis.ku.dk/portal/en/publications/singletube-library-preparation-for-degraded-dna(2eb9a522-ad4f-4a39-866a-e6eb0f1a6f9d).html.
10.1111/2041-210X.12871
- "Interspecific Gene Flow Shaped the Evolution of the Genus Canis". Current biology : CB (2018): http://europepmc.org/articles/PMC6224481.
10.1016/j.cub.2018.08.041
- "Population genomics of grey wolves and wolf-like canids in North America". PLoS genetics (2018): http://europepmc.org/articles/PMC6231604.
10.1371/journal.pgen.1007745
- "Multiproxy evidence highlights a complex evolutionary legacy of maize in South America". Science (New York, N.Y.)
(2018): https://doi.org/10.1126/science.aav0207.
10.1126/science.aav0207
- "Multi-omics and potential applications in wine production". Current opinion in biotechnology (2018): https://doi.org/10.1016/j.copbio.2018.11.014.
10.1016/j.copbio.2018.11.014
- "Identification of transcription factor genes involved in anthocyanin biosynthesis in carrot (Daucus carota L.) using RNA-Seq".
BMC genomics (2018): http://europepmc.org/articles/PMC6225646.
10.1186/s12864-018-5135-6
- "Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for All Living Bat Species". Annual
review of animal biosciences (2018): https://doi.org/10.1146/annurev-animal-022516-022811.
10.1146/annurev-animal-022516-022811
- "Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure". Molecular ecology
resources (2018): http://europepmc.org/articles/PMC6120510.
10.1111/1755-0998.12891
- "Quantifying Temporal Genomic Erosion in Endangered Species". Trends in ecology & evolution (2018): https://doi.org/10.1016/j.tree.2017.12.002.
10.1016/j.tree.2017.12.002
- "Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding".
Molecular ecology (2018): https://doi.org/10.1111/mec.14474.
10.1111/mec.14474
- "Applied Hologenomics: Feasibility and Potential in Aquaculture". Trends in biotechnology (2018): https://doi.org/10.1016/j.tibtech.2017.12.006.
10.1016/j.tibtech.2017.12.006
- "Earth BioGenome Project: Sequencing life for the future of life". Proceedings of the National Academy of Sciences of the
United States of America (2018): http://europepmc.org/articles/PMC5924910.
10.1073/pnas.1720115115
- "Recent Asian origin of chytrid fungi causing global amphibian declines". Science (New York, N.Y.) (2018): http://europepmc.org/articles/PMC6311102.
10.1126/science.aar1965
- "Mind the gut: genomic insights to population divergence and gut microbial composition of two marine keystone species". Microbiome
(2018): http://europepmc.org/articles/PMC5932900.
10.1186/s40168-018-0467-7
- "Whole-Genome Sequencing of African Dogs Provides Insights into Adaptations against Tropical Parasites". Molecular biology
and evolution (2018): https://doi.org/10.1093/molbev/msx258.
10.1093/molbev/msx258
- "Greenland sled dogs at risk of extinction". Science (New York, N.Y.) (2018): https://doi.org/10.1126/science.aat9578.
10.1126/science.aat9578
- "Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia)". G3 (Bethesda, Md.) (2018): http://europepmc.org/articles/PMC5940132.
10.1534/g3.117.300443
- "The evolutionary history of dogs in the Americas". Science (New York, N.Y.) (2018): https://doi.org/10.1126/science.aao4776.
10.1126/science.aao4776
- "Ancient genomes from Iceland reveal the making of a human population". Science (New York, N.Y.) (2018): https://doi.org/10.1126/science.aar2625.
10.1126/science.aar2625
- "Debugging diversity - a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate
monitoring tool". Molecular ecology resources (2018): https://doi.org/10.1111/1755-0998.12912.
10.1111/1755-0998.12912
- "Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage
for Millennia". Current biology : CB (2018): http://europepmc.org/articles/PMC6089836.
10.1016/j.cub.2018.05.058
- "Protective role of the vulture facial skin and gut microbiomes aid adaptation to scavenging". Acta veterinaria Scandinavica
(2018): http://europepmc.org/articles/PMC6182802.
10.1186/s13028-018-0415-3
- "Promises and pitfalls of using high-throughput sequencing for diet analysis". Molecular ecology resources (2018):
https://doi.org/10.1111/1755-0998.12960.
10.1111/1755-0998.12960
- "MobiSeq: De novo SNP discovery in model and non-model species through sequencing the flanking region of transposable elements".
Molecular ecology resources (2018): https://doi.org/10.1111/1755-0998.12984.
10.1111/1755-0998.12984
- Marie Lisandra Zepeda Mendoza; Zijun Xiong; Marina Escalera-Zamudio; Anne Kathrine Runge; Julien Thézé; Daniel Streicker;
Hannah K. Frank; et al. "Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat". Nature
Ecology & Evolution 2 4 (2018): 659-668. https://curis.ku.dk/portal/en/publications/hologenomic-adaptations-underlying-the-evolution-of-sanguivory-in-the-common-vampire-bat(077d8d9a-3973-4e11-98e4-558382cc8395).html.
10.1038/s41559-018-0476-8
- "Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.". GigaScience
(2017): http://europepmc.org/abstract/med/28854615.
10.1093/gigascience/gix049
- "An ¿Aukward' Tale: A Genetic Approach to Discover the Whereabouts of the Last Great Auks.". Genes (2017): http://europepmc.org/abstract/med/28617333.
10.3390/genes8060164
- "Draft genome of the fungus-growing termite pathogenic fungus Ophiocordyceps bispora (Ophiocordycipitaceae, Hypocreales, Ascomycota).".
Data in brief (2017): http://europepmc.org/abstract/med/28349099.
10.1016/j.dib.2017.02.051
- "Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution.".
Proceedings. Biological sciences (2017): http://europepmc.org/abstract/med/28250188.
10.1098/rspb.2016.2818
- "Characterizing restriction enzyme-associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom-designed
RNA probes.". Molecular ecology resources (2017): http://europepmc.org/abstract/med/27762072.
10.1111/1755-0998.12610
- "Documenting DNA in the dust.". Molecular ecology (2017): http://europepmc.org/abstract/med/28239926.
10.1111/mec.13944
- "Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features.". Nature
communications (2017): http://europepmc.org/abstract/med/28165450.
10.1038/ncomms14229
- Marcela Sandoval-Velasco; Inge K. C. Lundstrøm; Nathan Wales; María C. Ávila-Arcos; Hannes Schroeder; M. Thomas P. Gilbert.
"Relative performance of two DNA extraction and library preparation methods on archaeological human teeth samples". STAR:
Science & Technology of Archaeological Research 3 1 (2017): 80-88. https://doi.org/10.1080/20548923.2017.1388551.
10.1080/20548923.2017.1388551
- Kampmann, M.-L.; Schnell, I.B.; Jensen, R.H.; Axtner, J.; Sander, A.F.; Hansen, A.J.; Bertelsen, M.F.; et al. "Leeches as
a source of mammalian viral DNA and RNA—a study in medicinal leeches". European Journal of Wildlife Research 63 2 (2017):
http://www.scopus.com/inward/record.url?eid=2-s2.0-85015922208&partnerID=MN8TOARS.
10.1007/s10344-017-1093-6
- Alberdi, A.; Aizpurua, O.; Gilbert, M.T.P.; Bohmann, K.. "Scrutinizing key steps for reliable metabarcoding of environmental
samples". Methods in Ecology and Evolution (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85026647676&partnerID=MN8TOARS.
10.1111/2041-210X.12849
- "Eggshell palaeogenomics: Palaeognath evolutionary history revealed through ancient nuclear and mitochondrial DNA from Madagascan
elephant bird (Aepyornis sp.) eggshell". Molecular phylogenetics and evolution (2017): https://doi.org/10.1016/j.ympev.2017.01.005.
10.1016/j.ympev.2017.01.005
- "Connecting Earth observation to high-throughput biodiversity data". Nature ecology & evolution (2017): https://doi.org/10.1038/s41559-017-0176.
10.1038/s41559-017-0176
- "The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics". BMC genomics
(2017): http://europepmc.org/articles/PMC5492679.
10.1186/s12864-017-3883-3
- "An expanded mammal mitogenome dataset from Southeast Asia". GigaScience (2017): http://europepmc.org/articles/PMC5737531.
10.1093/gigascience/gix053
- "Evolutionary History of Saber-Toothed Cats Based on Ancient Mitogenomics". Current biology : CB (2017): https://doi.org/10.1016/j.cub.2017.09.033.
10.1016/j.cub.2017.09.033
- "Natural selection shaped the rise and fall of passenger pigeon genomic diversity". Science (New York, N.Y.) (2017):
https://doi.org/10.1126/science.aao0960.
10.1126/science.aao0960
- "Genome-wide Ancestry and Demographic History of African-Descendant Maroon Communities from French Guiana and Suriname". American
journal of human genetics (2017): http://europepmc.org/articles/PMC5673667.
10.1016/j.ajhg.2017.09.021
- "Mitochondrial DNA from the eradicated European Plasmodium vivax and P. falciparum from 70-year-old slides from the Ebro Delta
in Spain.". Proceedings of the National Academy of Sciences of the United States of America (2016): http://europepmc.org/abstract/med/27671660.
10.1073/pnas.1611017113
- "Complete mitochondrial genomes of living and extinct pigeons revise the timing of the columbiform radiation.". BMC evolutionary
biology (2016): http://europepmc.org/abstract/med/27782796.
10.1186/s12862-016-0800-3
- "Do Vertebrate Gut Metagenomes Confer Rapid Ecological Adaptation?". Trends in ecology & evolution (2016): http://europepmc.org/abstract/med/27453351.
10.1016/j.tree.2016.06.008
- "The population genomic basis of geographic differentiation in North American common ragweed (Ambrosia artemisiifolia L.).".
Ecology and Evolution (2016): http://europepmc.org/abstract/med/28725355.
10.1002/ece3.2143
- "DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding
analyses.". BMC research notes (2016): http://europepmc.org/abstract/med/27142414.
10.1186/s13104-016-2064-9
- "Bone-associated gene evolution and the origin of flight in birds.". BMC genomics (2016): http://europepmc.org/abstract/med/27193938.
10.1186/s12864-016-2681-7
- "Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds.". Genome
biology and evolution (2016): http://europepmc.org/abstract/med/26979796.
10.1093/gbe/evw041
- "Genomic population structure of freshwater-resident and anadromous ide (Leuciscus idus) in north-western Europe.". Ecology
and Evolution (2016): http://europepmc.org/abstract/med/26941944.
10.1002/ece3.1909
- "Genome-culture coevolution promotes rapid divergence of killer whale ecotypes.". Nature communications (2016): http://europepmc.org/abstract/med/27243207.
10.1038/ncomms11693
- Finch, B.W.; Hunter, N.D.; Winkelmann, I.; Manzano-Vargas, K.; Njoroge, P.; Fjeldså, J.; Gilbert, M.T.P.. "Redefining the
taxonomy of the all-black and pied boubous (Laniarius spp.) in coastal Kenya and Somalia". Bulletin of the British Ornithologists'
Club 136 2 (2016): 74-85. http://www.scopus.com/inward/record.url?eid=2-s2.0-84982166633&partnerID=MN8TOARS.
- "Further evidence of Chelonid herpesvirus 5 (ChHV5) latency: high levels of ChHV5 DNA detected in clinically healthy marine
turtles.". PeerJ (2016): http://europepmc.org/abstract/med/27547576.
10.7717/peerj.2274
- M Thomas P Gilbert; Mikkel-Holger S. Sinding. "The Draft Genome of Extinct European Aurochs and its Implications for De-Extinction".
Open Quaternary 2 (2016): https://curis.ku.dk/portal/en/publications/the-draft-genome-of-extinct-european-aurochs-and-its-implications-for-deextinction(cb8f9ac8-ee45-404f-b00c-8c17d0b813ff).html.
10.5334/oq.25
- Wales, N.; Ramos Madrigal, J.; Cappellini, E.; Carmona Baez, A.; Samaniego Castruita, J.A.; Romero-Navarro, J.A.; Carøe, C.;
et al. "The limits and potential of paleogenomic techniques for reconstructing grapevine domestication". Journal of Archaeological
Science 72 (2016): 57-70. http://www.scopus.com/inward/record.url?eid=2-s2.0-84973856021&partnerID=MN8TOARS.
10.1016/j.jas.2016.05.014
- Richmond, D.J.; Sinding, M.-H.S.; Gilbert, M.T.P.. "The potential and pitfalls of de-extinction". Zoologica Scripta
45 (2016): 22-36. http://www.scopus.com/inward/record.url?eid=2-s2.0-84988982547&partnerID=MN8TOARS.
10.1111/zsc.12212
- "Genome Sequence of a 5,310-Year-Old Maize Cob Provides Insights into the Early Stages of Maize Domestication". Current
biology : CB (2016): https://doi.org/10.1016/j.cub.2016.09.036.
10.1016/j.cub.2016.09.036
- "New insights on single-stranded versus double-stranded DNA library preparation for ancient DNA.". BioTechniques (2015):
http://europepmc.org/abstract/med/26651516.
10.2144/000114364
- Olalde, I.; Schroeder, H.; Sandoval-Velasco, M.; Vinner, L.; Lobón, I.; Ramirez, O.; Civit, S.; et al. "A common genetic origin
for early farmers from mediterranean cardial and central european LBK cultures". Molecular Biology and Evolution 32
12 (2015): 3132-3142. http://www.scopus.com/inward/record.url?eid=2-s2.0-84948176458&partnerID=MN8TOARS.
10.1093/molbev/msv181
- Da Fonseca, R.R.; Smith, B.D.; Wales, N.; Cappellini, E.; Skoglund, P.; Fumagalli, M.; Samaniego, J.A.; et al. "The origin
and evolution of maize in the Southwestern United States". Nature Plants 1 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84925407129&partnerID=MN8TOARS.
10.1038/nplants.2014.3
- Jarvis, E.D.; Mirarab, S.; Aberer, A.J.; Li, B.; Houde, P.; Li, C.; Ho, S.Y.W.; et al. "Phylogenomic analyses data of the
avian phylogenomics project". GigaScience 4 1 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84929606489&partnerID=MN8TOARS.
10.1186/s13742-014-0038-1
- Roggenbuck, M.; Schnell, I.Bæ.; Blom, N.; Bælum, J.; Bertelsen, M.F.; Sicheritz-Pontén, T.; Sørensen, Sø.J.; et al. "Erratum:
The microbiome of New World vultures (Nature Communications (2014) 5 (5498) DOI:10.1038/ncomms6498)". Nature Communications
6 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84944877162&partnerID=MN8TOARS.
10.1038/ncomms9774
- Christian Anders Wathne Bruhn; Sandra Cathrine Abel Nielsen; José Alfredo Samaniego Castruita; Jemma Wadsworth; Nick J. Knowles;
M Thomas P Gilbert. "Viral meningitis epidemics and a single, recent, recombinant and anthroponotic origin of swine vesicular
disease virus". Evolution, Medicine, and Public Health 2015 1 (2015): 289-303. https://curis.ku.dk/portal/en/publications/viral-meningitis-epidemics-and-a-single-recent-recombinant-and-anthroponotic-origin-of-swine-vesicular-disease-virus(1dcfe442-a9d7-4077-9032-566797553d65).html.
10.1093/emph/eov026
- Sonne, Christian; Dyck, Markus; Rigét, Frank F.; Jensen, Jens-Erik Beck; Hyldstrup, Lars; Letcher, Robert J.; Gustavson, Kim;
Gilbert, M. Thomas P.; Dietz, Rune. "Penile density and globally used chemicals in Canadian and Greenland polar bears". Environmental
Research 137 C (2015): 287-291. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000352331000034&KeyUID=WOS:000352331000034.
10.1016/j.envres.2014.12.026
- Orlando, Ludovic; Gilbert, M. Thomas P.; Willerslev, Eske. "Reconstructing ancient genomes and epigenomes". Nature Publishing
Group (2015): 1-14. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000356447500008&KeyUID=WOS:000356447500008.
10.1038/nrg3935
- Cracraft, J.; Houde, P.. "Response to Comment on “Whole-genome analyses resolve early branches in the tree of life of modern
birds". Science (New York, NY) (2015): 1-4.
papers2://publication/uuid/FF066611-B3FC-486C-B8C7-9D240B9C0412
- Schnell, Ida Bærholm; Bohmann, Kristine; Gilbert, M. Thomas P.. "Tag jumps illuminated - reducing sequence-to-sample misidentifications
in metabarcoding studies". Molecular Ecology Resources (2015): n/a-n/a. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000362838300004&KeyUID=WOS:000362838300004.
10.1111/1755-0998.12402
- Koepfli, Klaus-Peter; Paten, Benedict; the Genome, K. Community of Scientists; O'Brien, Stephen J.. "The Genome 10K Project:
A Way Forward". Annual Review of Animal Biosciences 3 1 (2015): 57-111. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000350991900004&KeyUID=WOS:000350991900004.
10.1146/annurev-animal-090414-014900
- Bruhn, C. A. W.; Nielsen, S. C. A.. "Viral Meningitis Epidemics and a Single, Recent, Recombinant and Anthroponotic Origin
of Swine Vesicular Disease Virus". … (2015):
papers2://publication/uuid/A45DF9FF-D6B8-4F6C-A8D0-F6CDA8BDE5CB
- Zepeda Mendoza, M. L.; Sicheritz-Ponten, T.; Gilbert, M. T. P.. "Environmental genes and genomes: understanding the differences
and challenges in the approaches and software for their analyses". Briefings in Bioinformatics (2015): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000361756900002&KeyUID=WOS:000361756900002.
10.1093/bib/bbv001
- Schroeder, Hannes; Ávila-Arcos, María C.; Malaspinas, Anna-Sapfo; Poznik, G. David; Sandoval-Velasco, Marcela; Carpenter,
Meredith L.; Moreno-Mayar, José Víctor; et al. "Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean".
Proceedings of the National Academy of Sciences (2015): 201421784-201421784. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000351477000038&KeyUID=WOS:000351477000038.
10.1073/pnas.1421784112
- Martin, Michael D.; Vieira, Filipe G.; Ho, Simon Y. W.; Wales, Nathan; Schubert, Mikkel; Seguin-Orlando, Andaine; Ristaino,
Jean B.; Gilbert, M. Thomas P.. "Genomic characterization of a South American Phytophthora hybrid mandates reassessment of
the geographic origins of Phytophthora infestans". Molecular biology and evolution (2015):
papers2://publication/doi/10.1093/molbev/msv241
- Zhang, Guojie; Rahbek, Carsten; Graves, Gary R.; Lei, Fumin; Jarvis, Erich D.; Gilbert, M. Thomas P.. "Genomics: Bird sequencing
project takes off". Nature 522 7554 (2015): 34-34.
papers2://publication/doi/10.1038/522034d
- Morin, Phillip A.; Parsons, Kim M.; Archer, Frederick I.; Ávila-Arcos, María C.; Barrett-Lennard, Lance G.; Dalla Rosa, Luciano;
Duchene, Sebastián; et al. "Geographic and temporal dynamics of a global radiation and diversification in the killer whale".
Molecular Ecology 24 15 (2015): 3964-3979. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000358335300014&KeyUID=WOS:000358335300014.
10.1111/mec.13284
- Schnell, Ida Bærholm; Sollmann, Rahel; Calvignac-Spencer, Sébastien; Siddall, Mark E.; Yu, Douglas W.; Wilting, Andreas; Gilbert,
M. Thomas P.. "iDNA from terrestrial haematophagous leeches as a wildlife surveying and monitoring tool – prospects, pitfalls
and avenues to be developed". Frontiers in zoology (2015): 1-14. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000362068700001&KeyUID=WOS:000362068700001.
10.1186/s12983-015-0115-z
- Castruita, José Alfredo Samaniego; Mendoza, Marie Lisandra Zepeda; Barnett, Ross; Wales, Nathan; Gilbert, M. Thomas P.. "Odintifier
- A computational method for identifying insertions of organellar origin from modern and ancient high-throughput sequencing
data based on haplotype phasing". BMC Bioinformatics (2015): 1-13. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000358474700001&KeyUID=WOS:000358474700001.
10.1186/s12859-015-0682-1
- Khan, Imran; Yang, Zhikai; Maldonado, Emanuel; Li, Cai; Zhang, Guojie; Gilbert, M. Thomas P.; Jarvis, Erich D.; et al. "Olfactory
Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida". Molecular biology and evolution 32 11
(2015): 2832-2843. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000363033100003&KeyUID=WOS:000363033100003.
10.1093/molbev/msv155
- Pedersen, Mikkel Winther; Overballe-Petersen, Soren; Ermini, Luca; Sarkissian, Clio Der; Haile, James; Hellstrom, Micaela;
Spens, Johan; et al. "Ancient and modern environmental DNA". Philosophical Transactions of the Royal Society B-Biological
Sciences 370 1660 (2015): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346147700011&KeyUID=WOS:000346147700011.
10.1098/rstb.2013.0383
- Sarkissian, Clio Der; Allentoft, Morten E.; Avila-Arcos, Maria C.; Barnett, Ross; Campos, Paula F.; Cappellini, Enrico; Ermini,
Luca; et al. "Ancient genomics". Philosophical Transactions of the Royal Society B-Biological Sciences 370 1660 (2015):
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346147700015&KeyUID=WOS:000346147700015.
10.1098/rstb.2013.0387
- Malmstrom, Helena; Linderholm, Anna; Skoglund, Pontus; Stora, Jan; Sjodin, Per; Gilbert, M. Thomas P.; Holmlund, Gunilla;
et al. "Ancient mitochondrial DNA from the northern fringe of the Neolithic farming expansion in Europe sheds light on the
dispersion process". Philosophical Transactions of the Royal Society B-Biological Sciences 370 1660 (2015): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346147700002&KeyUID=WOS:000346147700002.
10.1098/rstb.2013.0373
- ELry, LLl. "Avianbase: a community resource for bird genomics". (2015): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000351817300005&KeyUID=WOS:000351817300005.
10.1186/s13059-015-0588-2
- Ávila-Arcos, María C.; Sandoval-Velasco, Marcela; Schroeder, Hannes; Carpenter, Meredith L.; Malaspinas, Anna-Sapfo; Wales,
Nathan; Peñaloza, Fernando; Bustamante, Carlos D.; Gilbert, M. Thomas P.. "Comparative performance of two whole-genome capture
methodologies on ancient DNA Illumina libraries". Methods in Ecology and Evolution (2015): n/a-n/a. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000356718500011&KeyUID=WOS:000356718500011.
10.1111/2041-210X.12353
- Alberdi, Antton; Gilbert, M. Thomas P.; Razgour, Orly; Aizpurua, Ostaizka; Aihartza, Joxerra; Garin, Inazio. "Contrasting
population-level responses to Pleistocene climatic oscillations in an alpine bat revealed by complete mitochondrial genomes
and evolutionary history inference". Journal of Biogeography (2015): n/a-n/a. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000359376600010&KeyUID=WOS:000359376600010.
10.1111/jbi.12535
- Foote, A. D.; Liu, Yue; Thomas, Gregg W. C.; rcaron, Tom aacute scaron Vina; ldi, Jessica Alf ouml; Deng, Jixin; Dugan, Shannon;
et al. "Convergent evolution of the genomes of marine mammals". Nature Genetics (2015): 1-6. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000350327900020&KeyUID=WOS:000350327900020.
10.1038/ng.3198
- Cracraft, J.; Houde, P.; Ho, S.Y.W.; Mindell, D.P.; Fjeldså, J.; Lindow, B.; Edwards, S.V.; et al. "Response to Comment on
"Whole-genome analyses resolve early branches in the tree of life of modern birds"". Science 349 6255 (2015): 1460-b.
http://www.scopus.com/inward/record.url?eid=2-s2.0-84942163816&partnerID=MN8TOARS.
10.1126/science.aab1578
- Sinding, M.H.S.; Arneborg, J.; Nyegaard, G.; Gilbert, M.T.P.. "Ancient DNA unravels the truth behind the controversial GUS
Greenlandic Norse fur samples: The bison was a horse, and the muskox and bears were goats". Journal of Archaeological Science
53 (2015): 297-303. http://www.scopus.com/inward/record.url?eid=2-s2.0-84910616408&partnerID=MN8TOARS.
10.1016/j.jas.2014.10.028
- M W Jacobsen; J M Pujolar; M T P Gilbert; J V Moreno-Mayar; L Bernatchez; T D Als; J Lobon-Cervia; M M Hansen. "Speciation
and demographic history of Atlantic eels (Anguilla anguilla and A. rostrata) revealed by mitogenome sequencing". Heredity
113 5 (2014): 432-442. https://doi.org/10.1038/hdy.2014.44.
10.1038/hdy.2014.44
- Anthea Gentry; A M Lister; Anna-Marie Roos; M Thomas P Gilbert; Enrico Cappellini. "The lectotype for the Asian elephant,
Elephas maximus Linnaeus, 1758 (Mammalia, Proboscidea) and comments on `primary, secondary and tertiary syntypes' and `virtual
lectotype designation'". Bulletin of Zoological Nomenclature 71 3 (2014): https://curis.ku.dk/portal/en/publications/the-lectotype-for-the-asian-elephant-elephas-maximus-linnaeus-1758-mammalia-proboscidea-and-comments-on-primary-secondary-and-tertiary-syntypes-and-virtual-lectotype-designation(1ec36818-9e26-45bc-ae7f-c93911afb7f8).html.
- Gilbert, M. Thomas P.. "Yersinia pestis: one pandemic, two pandemics, three pandemics, more?". The Lancet Infectious Diseases
(2014): 1-2. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000333501600006&KeyUID=WOS:000333501600006.
10.1016/S1473-3099(14)70002-7
- Sandra Cathrine Abel Nielsen; Christian Anders Wathne Bruhn; José Alfredo Samaniego Castruita; Jemma Wadsworth; Nick J. Knowles;
M Thomas P Gilbert. "Near-complete genome sequencing of swine vesicular disease virus using the Roche GS FLX sequencing platform".
PLOS ONE 9 5 (2014): https://curis.ku.dk/portal/en/publications/nearcomplete-genome-sequencing-of-swine-vesicular-disease-virus-using-the-roche-gs-flx-sequencing-platform(dfcff74e-b2aa-4cdb-a3b7-9e0cf9ab4a4f).html.
10.1371/journal.pone.0097180
- Gerbault, P.; Allaby, R. G.; Boivin, N.; Rudzinski, A.; Grimaldi, I. M.; Pires, J. C.; Climer Vigueira, C.; et al. "Storytelling
and story testing in domestication". Proceedings of the National Academy of Sciences (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000335199000029&KeyUID=WOS:000335199000029.
10.1073/pnas.1400425111
- Raghavan, Maanasa; DeGiorgio, Michael; Albrechtsen, Anders; Moltke, Ida; Skoglund, Pontus; Korneliussen, Thorfinn S.; Gronnow,
Bjarne; et al. "The genetic prehistory of the New World Arctic". Science 345 6200 (2014): 1020-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000340870900030&KeyUID=WOS:000340870900030.
10.1126/science.1255832
- Roggenbuck, Michael; Schnell, Ida Baerholm; Blom, Nikolaj; Baelum, Jacob; Bertelsen, Mads Frost; Ponten, Thomas Sicheritz;
Sorensen, Soren Johannes; et al. "The microbiome of New World vultures". Nature Communications 5 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000345913000003&KeyUID=WOS:000345913000003.
10.1038/ncomms6498
- Bruhn, Christian A. W.; Audelin, Anne M.; Helleberg, Marie; Bjorn-Mortensen, Karen; Obel, Niels; Gerstoft, Jan; Nielsen, Claus;
et al. "The origin and emergence of an HIV-1 epidemic". AIDS 28 7 (2014): 1031-1040. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000335350900012&KeyUID=WOS:000335350900012.
10.1097/QAD.0000000000000198
- Cappellini, E.; Collins, M. J.; Gilbert, M. T. P.. "Unlocking Ancient Protein Palimpsests". Science (New York, NY)
343 6177 (2014): 1320-1322. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000333108500023&KeyUID=WOS:000333108500023.
10.1126/science.1249274
- Alfaro-Núñez, Alonzo; Gilbert, M. Thomas P.. "Validation of a sensitive PCR assay for the detection of Chelonid fibropapilloma-associated
herpesvirus in latent turtle infections". Journal of Virological Methods 206 (2014): 38-41. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000340219100006&KeyUID=WOS:000340219100006.
10.1016/j.jviromet.2014.05.019
- Nathan Wales; Kenneth Andersen; Enrico Cappellini; Maria del Carmen Avila Arcos; M Thomas P Gilbert. "Optimization of DNA
recovery and amplification from non-carbonized archaeobotanical remains". PLOS ONE 9 1 (2014): https://curis.ku.dk/portal/en/publications/optimization-of-dna-recovery-and-amplification-from-noncarbonized-archaeobotanical-remains(a5f638a6-8522-4ee2-a9ce-c91e3a6ab43f).html.
10.1371/journal.pone.0086827
- Jarvis, Erich D.; Mirarab, Siavash; Aberer, Andre J.; Li, Bo; Houde, Peter; Li, Cai; Ho, Simon Y. W.; et al. "Whole-genome
analyses resolve early branches in the tree of life of modern birds". Science 346 6215 (2014): 1320-1331. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346189600036&KeyUID=WOS:000346189600036.
10.1126/science.1253451
- Tsangaras, Kyriakos; Wales, Nathan; Sicheritz-Ponten, Thomas; Rasmussen, Simon; Michaux, Johan; Ishida, Yasuko; Morand, Serge;
et al. "Hybridization Capture Using Short PCR Products Enriches Small Genomes by Capturing Flanking Sequences (CapFlank)".
Plos One 9 10 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000342591500060&KeyUID=WOS:000342591500060.
10.1371/journal.pone.0109101
- Cui, Jie; Zhao, Wei; Huang, Zhiyong; Jarvis, Erich D.; Gilbert, M. Thomas P.; Walker, Peter J.; Holmes, Edward C.; Zhang,
Guojie. "Low frequency of paleoviral infiltration across the avian phylogeny". Genome Biology 15 12 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346609500015&KeyUID=WOS:000346609500015.
10.1186/s13059-014-0539-3
- Nielsen, Sandra C. Abel; Bruhn, Christian A. W.; Samaniego, Jose Alfredo; Wadsworth, Jemma; Knowles, Nick J.; Gilbert, M.
Thomas P.. "Near-Complete Genome Sequencing of Swine Vesicular Disease Virus Using the Roche GS FLX Sequencing Platform".
PLoS ONE 9 5 (2014): e97180-e97180.
papers2://publication/doi/10.1371/journal.pone.0097180.t001
- Wales, Nathan; Andersen, Kenneth; Cappellini, Enrico; Ávila-Arcos, María C.; Gilbert, M. Thomas P.. "Optimization of DNA Recovery
and Amplification from Non-Carbonized Archaeobotanical Remains". PLoS ONE 9 1 (2014): e86827-e86827.
papers2://publication/doi/10.1371/journal.pone.0086827.s021
- Warinner, Christina; Rodrigues, João F. Matias; Vyas, Rounak; Trachsel, Christian; Shved, Natallia; Grossmann, Jonas; Radini,
Anita; et al. "Pathogens and host immunity in the ancient human oral cavity". Nature Genetics 46 4 (2014): 336-344.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000334510100008&KeyUID=WOS:000334510100008.
10.1038/ng.2906
- Schubert, Mikkel; Jonsson, Hakon; Chang, Dan; Sarkissian, Clio Der; Ermini, Luca; Ginolhac, Aurelien; Albrechtsen, Anders;
et al. "Prehistoric genomes reveal the genetic foundation and cost of horse domestication". Proceedings of the National
Academy of Sciences of the United States of America 111 52 (2014): E5661-E5669. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000347444400011&KeyUID=WOS:000347444400011.
10.1073/pnas.1416991111
- Hope, Paul R.; Bohmann, Kristine; Gilbert, M. Thomas P.; Zepeda-Mendoza, Marie Lisandra; Razgour, Orly; Jones, Gareth. "Second
generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera,
Vespertilionidae) in winter". Frontiers in zoology 11 1 (2014): 39-39. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000335857000001&KeyUID=WOS:000335857000001.
10.1186/1742-9994-11-39
- Meredith, Robert W.; Zhang, Guojie; Gilbert, M. Thomas P.; Jarvis, Erich D.; Springer, Mark S.. "Evidence for a single loss
of mineralized teeth in the common avian ancestor". Science 346 6215 (2014): 1336-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346189600041&KeyUID=WOS:000346189600041.
10.1126/science.1254390
- Pereira, Joana; Johnson, Warren E.; O'Brien, Stephen J.; Jarvis, Erich D.; Zhang, Guojie; Gilbert, M. Thomas P.; Vasconcelos,
Vitor; Antunes, Agostinho. "Evolutionary Genomics and Adaptive Evolution of the Hedgehog Gene Family (Shh, Ihh and Dhh) in
Vertebrates". Plos One 9 12 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000347063500001&KeyUID=WOS:000347063500001.
10.1371/journal.pone.0074132
- Allentoft, M. E.; Heller, R.; Oskam, C. L.; Lorenzen, E. D.; Hale, M. L.; Gilbert, M. T. P.; Jacomb, C.; Holdaway, R. N.;
Bunce, M.. "Extinct New Zealand megafauna were not in decline before human colonization". Proceedings of the National Academy
of Sciences 111 13 (2014): 4922-4927. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000333579700059&KeyUID=WOS:000333579700059.
10.1073/pnas.1314972111
- Willerslev, Eske; Davison, John; Moora, Mari; Zobel, Martin; Coissac, Eric; Edwards, Mary E.; Lorenzen, Eline D.; et al. "Fifty
thousand years of Arctic vegetation and megafaunal diet". Nature 506 7486 (2014): 47-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000330648100028&KeyUID=WOS:000330648100028.
10.1038/nature12921
- Borges, Rui; Khan, Imran; Johnson, Warren E.; Gilbert, M. Thomas P.; Zhang, Guojie; Jarvis, Erich D.; O'Brien, Stephen J.;
Antunes, Agostinho. "Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds".
BMC Genomics 16 1 (2014): 751-751. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000362253200001&KeyUID=WOS:000362253200001.
10.1186/s12864-015-1924-3
- Li, Shengbin; Li, Bo; Cheng, Cheng; Xiong, Zijun; Liu, Qingbo; Lai, Jianghua; Carey, Hannah V.; et al. "Genomic signatures
of near-extinction and rebirth of the crested ibis and other endangered bird species". Genome Biology 15 12 (2014):
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346609500029&KeyUID=WOS:000346609500029.
10.1186/s13059-014-0557-1
- Alfaro-Nunez, Alonzo; Bertelsen, Mads Frost; Bojesen, Anders Miki; Rasmussen, Isabel; Zepeda-Mendoza, Lisandra; Olsen, Morten
Tange; Gilbert, Marcus Thomas Pius. "Global distribution of Chelonid fibropapilloma-associated herpesvirus among clinically
healthy sea turtles". Bmc Evolutionary Biology 14 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000344957300001&KeyUID=WOS:000344957300001.
10.1186/s12862-014-0206-z
- Wang, C.-C.; Gilbert, M.T.P.; Jin, L.; Li, H.. "Evaluating the Y chromosomal timescale in human demographic and lineage dating".
Investigative Genetics 5 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84907063828&partnerID=MN8TOARS.
- Martin, Michael D.; Zimmer, Elizabeth A.; Olsen, Morten T.; Foote, Andrew D.; Gilbert, M. Thomas P.; Brush, Grace S.. "Herbarium
specimens reveal a historical shift in phylogeographic structure of common ragweed during native range disturbance". Molecular
Ecology 23 7 (2014): 1701-1716. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000333333500008&KeyUID=WOS:000333333500008.
10.1111/mec.12675
- Li, C.; Zhang, Y.; Li, J.; Kong, L.; Hu, H.; Pan, H.; Xu, L.; et al. "Two Antarctic penguin genomes reveal insights into their
evolutionary history and molecular changes related to the Antarctic environment". GigaScience 3 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84917732702&partnerID=MN8TOARS.
10.1186/2047-217X-3-27
- Zhang, G.; Li, B.; Li, C.; Gilbert, M.T.P.; Jarvis, E.D.; Wang, J.. "Comparative genomic data of the Avian Phylogenomics Project".
GigaScience 3 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84923112740&partnerID=MN8TOARS.
10.1186/2047-217X-3-26
- Campos, P.F.; Hofreiter, M.; Orlando, L.; Willerslev, E.; Gilbert, M.T.P.. "Erratum: (Molecular Ecology)". Molecular Ecology
23 22 (2014): 5646-5648. http://www.scopus.com/inward/record.url?eid=2-s2.0-84939220571&partnerID=MN8TOARS.
10.1111/mec.12961
- Pedersen, J.S.; Valen, E.; Velazquez, A.M.V.; Parker, B.J.; Rasmussen, M.; Lindgreen, S.; Lilje, B.; et al. "Genome-wide nucleosome
map and cytosine methylation levels of an ancient human genome". Genome Research 24 3 (2014): 454-466. http://www.scopus.com/inward/record.url?eid=2-s2.0-84892911658&partnerID=MN8TOARS.
10.1101/gr.163592.113
- Bohmann, K.; Evans, A.; Gilbert, M.T.P.; Carvalho, G.R.; Creer, S.; Knapp, M.; Yu, D.W.; de Bruyn, M.. "Erratum to Environmental
DNA for wildlife biology and biodiversity monitoring. [Trends in Ecology & Evolution 29 (2014) 358 - 367]". Trends
in Ecology and Evolution 29 8 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84904419698&partnerID=MN8TOARS.
10.1016/j.tree.2014.05.012
- Martin, M.D.; Ho, S.Y.W.; Wales, N.; Ristaino, J.B.; Gilbert, M.T.P.. "Persistence of the mitochondrial lineage responsible
for the Irish potato famine in extant new world Phytophthora infestans". Molecular Biology and Evolution 31 6 (2014):
1414-1420. http://www.scopus.com/inward/record.url?eid=2-s2.0-84901465752&partnerID=MN8TOARS.
10.1093/molbev/msu086
- Ribeiro, Ângela M.; Zepeda-Mendoza, M. Lisandra; Bertelsen, Mads F.; Kristensen, Annemarie T.; Jarvis, Erich D.; Gilbert,
M. Thomas P.; da Fonseca, Rute R.. "A refined model of the genomic basis for phenotypic variation in vertebrate hemostasis".
BMC Evolutionary Biology 15 (2014): 124-124. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000357071400002&KeyUID=WOS:000357071400002.
10.1186/s12862-015-0409-y
- Zhang, Guojie; Li, Cai; Li, Qiye; Li, Bo; Larkin, Denis M.; Lee, Chul; Storz, Jay F.; et al. "Comparative genomics reveals
insights into avian genome evolution and adaptation". Science 346 6215 (2014): 1311-1320. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346189600035&KeyUID=WOS:000346189600035.
10.1126/science.1251385
- Zhou, Qi; Zhang, Jilin; Bachtrog, Doris; An, Na; Huang, Quanfei; Jarvis, Erich D.; Gilbert, M. Thomas P.; Zhang, Guojie. "Complex
evolutionary trajectories of sex chromosomes across bird taxa". Science 346 6215 (2014): 1332-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346189600037&KeyUID=WOS:000346189600037.
10.1126/science.1246338
- Pfenning, Andreas R.; Hara, Erina; Whitney, Osceola; Rivas, Miriam V.; Wang, Rui; Roulhac, Petra L.; Howard, Jason T.; et
al. "Convergent transcriptional specializations in the brains of humans and song-learning birds". Science 346 6215
(2014): 1333-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346189600038&KeyUID=WOS:000346189600038.
10.1126/science.1256846
- Larson, G.; Piperno, D. R.; Allaby, R. G.; Purugganan, M. D.; Andersson, L.; Arroyo-Kalin, M.; Barton, L.; et al. "Current
perspectives and the future of domestication studies". Proceedings of the National Academy of Sciences 111 17 (2014):
6139-6146. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000335199000026&KeyUID=WOS:000335199000026.
10.1073/pnas.1323964111
- Warinner, C.; Hendy, J.; Speller, C.; Cappellini, E.; Fischer, R.; Trachsel, C.; Arneborg, J.; et al. "Direct evidence of
milk consumption from ancient human dental calculus". Scientific Reports 4 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346251200001&KeyUID=WOS:000346251200001.
10.1038/srep07104
- Greenwold, Matthew J.; Bao, Weier; Jarvis, Erich D.; Hu, Haofu; Li, Cai; Gilbert, M. Thomas P.; Zhang, Guojie; Sawyer, Roger
H.. "Dynamic evolution of the alpha (alpha) and beta (beta) keratins has accompanied integument diversification and the adaptation
of birds into novel lifestyles". Bmc Evolutionary Biology 14 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346614400001&KeyUID=WOS:000346614400001.
10.1186/s12862-014-0249-1
- Bohmann, Kristine; Evans, Alice; Gilbert, M. Thomas P.; Carvalho, Gary R.; Creer, Simon; Knapp, Michael; Yu, Douglas W.; de
Bruyn, Mark. "Environmental DNA for wildlife biology and biodiversity monitoring". Trends in ecology & evolution (Personal
edition) (2014): 1-10. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000336873800011&KeyUID=WOS:000336873800011.
10.1016/j.tree.2014.04.003
- Zhang, Guojie; Jarvis, Erich D.; Gilbert, M. Thomas P.. "A flock of Genomes". Science 346 6215 (2014): 1308-1309. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000346189600033&KeyUID=WOS:000346189600033.
- Inger Eleanor Hall Winkelmann; Paula Campos; Jan Strugnell; Yves Cherel; Peter J. Smith; Tsunemi Kubodera; Louise Allcock;
et al. "Mitochondrial genome diversity and population structure of the giant squid Architeuthis". Proceedings of the Royal
Society B: Biological Sciences 280 1759 (2013): https://curis.ku.dk/portal/en/publications/mitochondrial-genome-diversity-and-population-structure-of-the-giant-squid-architeuthis(9e41c4aa-2e39-4108-918e-f339711fbf81).html.
10.1098/rspb.2013.0273
- Foote, Andrew D.; Morin, Phillip A.; Pitman, Robert L.; Avila-Arcos, Maria C.; Durban, John W.; van Helden, Anton; Sinding,
Mikkel-Holger S.; Gilbert, M. Thomas P.. "Mitogenomic insights into a recently described and rarely observed killer whale
morphotype". Polar Biology 36 10 (2013): 1519-1523. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000324142700012&KeyUID=WOS:000324142700012.
10.1007/s00300-013-1354-0
- Avila-Arcos, M. C.; Ho, S. Y. W.; Ishida, Y.; Nikolaidis, N.; Tsangaras, K.; Honig, K.; Medina, R.; et al. "One Hundred Twenty
Years of Koala Retrovirus Evolution Determined from Museum Skins". Molecular biology and evolution 30 2 (2013): 299-304.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000314122000007&KeyUID=WOS:000314122000007.
10.1093/molbev/mss223
- Carpenter, Meredith L.; Buenrostro, Jason D.; Valdiosera, Cristina; Schroeder, Hannes; Allentoft, Morten E.; Sikora, Martin;
Rasmussen, Morten; et al. "Pulling out the 1%: Whole-Genome Capture for the Targeted Enrichment of Ancient DNA Sequencing
Libraries". American journal of human genetics 93 5 (2013): 852-864. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000326996600006&KeyUID=WOS:000326996600006.
10.1016/j.ajhg.2013.10.002
- Orlando, Ludovic; Ginolhac, Aurélien; Zhang, Guojie; Froese, Duane; Albrechtsen, Anders; Stiller, Mathias; Schubert, Mikkel;
et al. "Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse". Nature (2013):
1-8. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000321285600036&KeyUID=WOS:000321285600036.
10.1038/nature12323
- Moura, A. E.; Nielsen, S. C. A.; Vilstrup, J. T.; Moreno-Mayar, J. V.; Gilbert, M. T. P.; Gray, H. W. I.; Natoli, A.; Moller,
L.; Hoelzel, A. R.. "Recent Diversification of a Marine Genus (Tursiops spp.) Tracks Habitat Preference and Environmental
Change". Systematic biology 62 6 (2013): 865-877. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000326193500005&KeyUID=WOS:000326193500005.
10.1093/sysbio/syt051
- Cappellini, Enrico; Gentry, Anthea; Palkopoulou, Eleftheria; Ishida, Yasuko; Cram, David; Roos, Anna-Marie; Watson, Mick;
et al. "Resolution of the type material of the Asian elephant, Elephas maximusLinnaeus, 1758 (Proboscidea, Elephantidae)".
Zoological Journal of the Linnean Society (2013): n/a-n/a. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000330782500008&KeyUID=WOS:000330782500008.
10.1111/zoj.12084
- Calvignac-Spencer, Sébastien; Leendertz, Fabian H.; Gilbert, M. Thomas P.; Schubert, Grit. "An invertebrate stomach's view
on vertebrate ecology". BioEssays (2013): n/a-n/a. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000325625000011&KeyUID=WOS:000325625000011.
10.1002/bies.201300060
- Shapiro, M. D.; Kronenberg, Z.; Li, C.; Domyan, E. T.; Pan, H.; Campbell, M.; Tan, H.; et al. "Genomic Diversity and Evolution
of the Head Crest in the Rock Pigeon". Science (New York, NY) (2013): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000315452000038&KeyUID=WOS:000315452000038.
10.1126/science.1230422
- Winkelmann, I.; Campos, P. F.; Strugnell, J.; Cherel, Y.; Smith, P. J.; Kubodera, T.; Allcock, L.; et al. "Mitochondrial genome
diversity and population structure of the giant squid Architeuthis: genetics sheds new light on one of the most enigmatic
marine species". Proceedings of the Royal Society B: Biological Sciences 280 1759 (2013): 20130273-20130273. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000180165800044&KeyUID=WOS:000180165800044.
10.1126/science.1079365
- Ávila-Arcos, M.C.; Ho, S.Y.W.; Ishida, Y.; Nikolaidis, N.; Tsangaras, K.; Hönig, K.; Medina, R.; et al. "Erratum: One hundred
twenty years of Koala retrovirus evolution determined from museum skins (Molecular Biology and Evolution (2013) 30:2 (299-304)
DOI: 10.1093/molbev/mss223)". Molecular Biology and Evolution 30 5 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84876523845&partnerID=MN8TOARS.
10.1093/molbev/mst015
- Foote, A.D.; Kaschner, K.; Schultze, S.E.; Garilao, C.; Ho, S.Y.W.; Post, K.; Higham, T.F.G.; et al. "Ancient DNA reveals
that bowhead whale lineages survived Late Pleistocene climate change and habitat shifts". Nature Communications 4 (2013):
http://www.scopus.com/inward/record.url?eid=2-s2.0-84877741664&partnerID=MN8TOARS.
10.1038/ncomms2714
- Bohmann, K.; Schnell, I.Bæ.; Gilbert, M.T.P.. "When bugs reveal biodiversity". Molecular Ecology 22 4 (2013): 909-911.
http://www.scopus.com/inward/record.url?eid=2-s2.0-84873802008&partnerID=MN8TOARS.
10.1111/mec.12221
- Fordyce, S.L.; Kampmann, M.-L.; van Doorn, N.L.; Gilbert, M.T.P.. "Long-term RNA persistence in postmortem contexts". Investigative
Genetics 4 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84878182515&partnerID=MN8TOARS.
10.1186/2041-2223-4-7
- Fordyce, S.L.; Bragstad, K.; Pedersen, S.S.; Jensen, T.G.; Gahrn-Hansen, B.; Daniels, R.; Hay, A.; et al. "Genetic diversity
among pandemic 2009 influenza viruses isolated from a transmission chain". Virology Journal 10 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84877774936&partnerID=MN8TOARS.
10.1186/1743-422X-10-116
- Martin, M.D.; Cappellini, E.; Samaniego, J.A.; Zepeda, M.L.; Campos, P.F.; Seguin-Orlando, A.; Wales, N.; et al. "Reconstructing
genome evolution in historic samples of the Irish potato famine pathogen". Nature Communications 4 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84892942971&partnerID=MN8TOARS.
10.1038/ncomms3172
- Foote, A.D.; Newton, J.; Ávila-Arcos, M.C.; Kampmann, M.-L.; Samaniego, J.A.; Post, K.; Rosing-Asvid, A.; Sinding, M.-H.S.;
Gilbert, M.T.P.. "Tracking niche variation over millennial timescales in sympatric killer whale lineages". Proceedings
of the Royal Society B: Biological Sciences 280 1768 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84896814514&partnerID=MN8TOARS.
10.1098/rspb.2013.1481
- Fordyce, S.L.; Ávila-Arcos, M.C.; Rasmussen, M.; Cappellini, E.; Romero-Navarro, J.A.; Wales, N.; Alquezar-Planas, D.E.; et
al. "Deep Sequencing of RNA from Ancient Maize Kernels". PLoS ONE 8 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84872224484&partnerID=MN8TOARS.
10.1371/journal.pone.0050961
- Duchene, Sebastian; Frey, Amy; Alfaro-Nunez, Alonzo; Dutton, Peter H.; Gilbert, M. Thomas P.; Morin, Phillip A.. "Marine turtle
mitogenome phylogenetics and evolution". Molecular Phylogenetics and Evolution 65 1 (2012): 241-250. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000308061000021&KeyUID=WOS:000308061000021.
10.1016/j.ympev.2012.06.010
- Andersen, Kenneth; Bird, Karen Lise; Rasmussen, Morten; Haile, James; Breuning-Madsen, Henrik; Kjaer, Kurt H.; Orlando, Ludovic;
Gilbert, M. Thomas P.; Willerslev, Eske. "Meta-barcoding of 'dirt' DNA from soil reflects vertebrate biodiversity". Molecular
Ecology 21 8 (2012): 1966-1979. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000302616200015&KeyUID=WOS:000302616200015.
10.1111/j.1365-294X.2011.05261.x
- Sinding, Mikkel-Holger S.; Gilbert, M. Thomas P.; Gronnow, Bjarne; Gullov, Hans Christian; Toft, Peter A.; Foote, Andrew D..
"Minimally destructive DNA extraction from archaeological artefacts made from whale baleen". Journal of Archaeological
Science 39 12 (2012): 3750-3753. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000308777400026&KeyUID=WOS:000308777400026.
10.1016/j.jas.2012.06.020
- Jacobsen, Magnus W.; Hansen, Michael M.; Orlando, Ludovic; Bekkevold, Dorte; Bernatchez, Louis; Willerslev, Eske; Gilbert,
M. Thomas P.. "Mitogenome sequencing reveals shallow evolutionary histories and recent divergence time between morphologically
and ecologically distinct European whitefish (Coregonus spp.)". Molecular Ecology 21 11 (2012): 2727-2742. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000304389500015&KeyUID=WOS:000304389500015.
10.1111/j.1365-294X.2012.05561.x
- Paijmans, Johanna L. A.; Gilbert, M. Thomas P.; Hofreiter, Michael. "Mitogenomic analyses from ancient dna". Molecular
Phylogenetics and Evolution (2012): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000324508900010&KeyUID=WOS:000324508900010.
10.1016/j.ympev.2012.06.002
- Thomsen, Philip Francis; Kielgast, Jos; Iversen, Lars L.; Wiuf, Carsten; Rasmussen, Morten; Gilbert, M. Thomas P.; Orlando,
Ludovic; Willerslev, Eske. "Monitoring endangered freshwater biodiversity using environmental DNA". Molecular Ecology
21 11 (2012): 2565-2573. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000304389500004&KeyUID=WOS:000304389500004.
10.1111/j.1365-294X.2011.05418.x
- Skoglund, Pontus; Malmstrom, Helena; Raghavan, Maanasa; Stora, Jan; Hall, Per; Willerslev, Eske; Gilbert, M. Thomas P.; Gotherstrom,
Anders; Jakobsson, Mattias. "Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe". Science
336 6080 (2012): 466-469. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000303233400045&KeyUID=WOS:000303233400045.
10.1126/science.1216304
- Dalen, Love; Orlando, Ludovic; Shapiro, Beth; Brandstrom-Durling, Mikael; Quam, Rolf; Gilbert, M. Thomas P.; Diez Fernandez-Lomana,
J. Carlos; et al. "Partial Genetic Turnover in Neandertals: Continuity in the East and Population Replacement in the West".
Molecular Biology and Evolution 29 8 (2012): 1893-1897. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000307171300001&KeyUID=WOS:000307171300001.
10.1093/molbev/mss074
- Jones, E. P.; Skirnisson, K.; McGovern, T. H.; Gilbert, M. T. P.; Willerslev, E.; Searle, J. B.. "Fellow travellers: a concordance
of colonization patterns between mice and men in the North Atlantic region". Bmc Evolutionary Biology 12 (2012): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000302316200001&KeyUID=WOS:000302316200001.
10.1186/1471-2148-12-35
- Malmstrom, Helena; Vretemark, Maria; Tillmar, Andreas; Durling, Mikael Brandstrom; Skoglund, Pontus; Gilbert, M. Thomas P.;
Willerslev, Eske; Holmlund, Gunilla; Gotherstrom, Anders. "Finding the founder of Stockholm - A kinship study based on Y-chromosomal,
autosomal and mitochondrial DNA". Annals of Anatomy-Anatomischer Anzeiger 194 1 (2012): 138-145. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000303142100017&KeyUID=WOS:000303142100017.
10.1016/j.aanat.2011.03.014
- Sanchez-Ouinto, Federico; Schroeder, Hannes; Ramirez, Oscar; Avila-Arcos, Maria C.; Pybus, Marc; Olalde, Inigo; Velazquez,
Amhed M. V.; et al. "Genomic Affinities of Two 7,000-Year-Old Iberian Hunter-Gatherers". Current Biology 22 16 (2012):
1494-1499. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000307795000022&KeyUID=WOS:000307795000022.
10.1016/j.cub.2012.06.005
- Parducci, Laura; Jorgensen, Tina; Tollefsrud, Mari Mette; Elverland, Ellen; Alm, Torbjorn; Fontana, Sonia L.; Bennett, K.
D.; et al. "Glacial Survival of Boreal Trees in Northern Scandinavia". Science 335 6072 (2012): 1083-1086. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000300931100042&KeyUID=WOS:000300931100042.
10.1126/science.1216043
- Murray, Daithi C.; Pearson, Stuart G.; Fullagar, Richard; Chase, Brian M.; Houston, Jayne; Atchison, Jennifer; White, Nicole
E.; et al. "High-throughput sequencing of ancient plant and mammal DNA preserved in herbivore middens". Quaternary Science
Reviews 58 (2012): 135-145. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000312428400011&KeyUID=WOS:000312428400011.
10.1016/j.quascirev.2012.10.021
- Ginolhac, Aurelien; Vilstrup, Julia; Stenderup, Jesper; Rasmussen, Morten; Stiller, Mathias; Shapiro, Beth; Zazula, Grant;
et al. "Improving the performance of true single molecule sequencing for ancient DNA". Bmc Genomics 13 (2012): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000308084800001&KeyUID=WOS:000308084800001.
10.1186/1471-2164-13-177
- Foote, Andrew D.; Thomsen, Philip Francis; Sveegaard, Signe; Wahlberg, Magnus; Kielgast, Jos; Kyhn, Line A.; Salling, Andreas
B.; et al. "Investigating the Potential Use of Environmental DNA (eDNA) for Genetic Monitoring of Marine Mammals". Plos
One 7 8 (2012): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000308206000006&KeyUID=WOS:000308206000006.
10.1371/journal.pone.0041781
- Jorgensen, Tina; Kjaer, Kurt H.; Haile, James; Rasmussen, Morten; Boessenkool, Sanne; Andersen, Kenneth; Coissac, Eric; et
al. "Islands in the ice: detecting past vegetation on Greenlandic nunataks using historical records and sedimentary ancient
DNA Meta-barcoding". Molecular Ecology 21 8 (2012): 1980-1988. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000302616200016&KeyUID=WOS:000302616200016.
10.1111/j.1365-294X.2011.05278.x
- Jorgensen, Tina; Haile, James; Moller, Per; Andreev, Andrei; Boessenkool, Sanne; Rasmussen, Morten; Kienast, Frank; et al.
"A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals
long-term vegetational stability". Molecular Ecology 21 8 (2012): 1989-2003. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000302616200017&KeyUID=WOS:000302616200017.
10.1111/j.1365-294X.2011.05287.x
- Wales, Nathan; Alberto Romero-Navarro, J.; Cappellini, Enrico; Gilbert, M. Thomas P.. "Choosing the Best Plant for the Job:
A Cost-Effective Assay to Prescreen Ancient Plant Remains Destined for Shotgun Sequencing". Plos One 7 9 (2012): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000309388900084&KeyUID=WOS:000309388900084.
10.1371/journal.pone.0045644
- Jenkins, Dennis L.; Davis, Loren G.; Stafford, Thomas W., Jr.; Campos, Paula F.; Hockett, Bryan; Jones, George T.; Cummings,
Linda Scott; et al. "Clovis Age Western Stemmed Projectile Points and Human Coprolites at the Paisley Caves". Science
337 6091 (2012): 223-228. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000306323500056&KeyUID=WOS:000306323500056.
10.1126/science.1218443
- Campos, Paula F.; Gilbert, Thomas M. P.. "DNA extraction from formalin-fixed material". Methods in molecular biology (Clifton,
N.J.) 840 (2012): 81-85. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000321877600012&KeyUID=WOS:000321877600012.
10.1007/978-1-61779-516-9_11
- Olsen, Maia E.; Bengtsson, Camilla Friis; Bertelsen, Mads F.; Willerslev, Eske; Gilbert, M. Thomas P.. "DNA from keratinous
tissue Part II: Feather". Annals of Anatomy-Anatomischer Anzeiger 194 1 (2012): 31-35. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000303142100006&KeyUID=WOS:000303142100006.
10.1016/j.aanat.2011.03.003
- Bengtsson, Camilla Friis; Olsen, Maia E.; Brandt, Luise Orsted; Bertelsen, Mads F.; Willerslev, Eske; Tobin, Desmond J.; Wilson,
Andrew S.; Gilbert, M. Thomas P.. "DNA from keratinous tissue. Part I: Hair and nail". Annals of Anatomy-Anatomischer Anzeiger
194 1 (2012): 17-25. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000303142100004&KeyUID=WOS:000303142100004.
10.1016/j.aanat.2011.03.013
- Yoccoz, N. G.; Brathen, K. A.; Gielly, L.; Haile, J.; Edwards, M. E.; Goslar, T.; von Stedingk, H.; et al. "DNA from soil
mirrors plant taxonomic and growth form diversity". Molecular Ecology 21 15 (2012): 3647-3655. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000306478800004&KeyUID=WOS:000306478800004.
10.1111/j.1365-294X.2012.05545.x
- Campos, Paula F.; Craig, Oliver E.; Turner-Walker, Gordon; Peacock, Elizabeth; Willerslev, Eske; Gilbert, M. Thomas P.. "DNA
in ancient bone - Where is it located and how should we extract it?". Annals of Anatomy-Anatomischer Anzeiger 194 1
(2012): 7-16. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000303142100003&KeyUID=WOS:000303142100003.
10.1016/j.aanat.2011.07.003
- Lavstsen, Thomas; Turner, Louise; Saguti, Fredy; Magistrado, Pamela; Rask, Thomas S.; Jespersen, Jakob S.; Wang, Christian
W.; et al. "Plasmodium falciparum erythrocyte membrane protein 1 domain cassettes 8 and 13 are associated with severe malaria
in children". Proceedings of the National Academy of Sciences of the United States of America 109 26 (2012): E1791-E1800.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000306291400016&KeyUID=WOS:000306291400016.
10.1073/pnas.1120455109
- Nielsen, Sandra C. Abel; Mourier, Tobias; Baandrup, Ulrik; Soland, Tine Mangart; Bertelsen, Mads Frost; Gilbert, M. Thomas
P.; Nielsen, Lars Peter. "Probable Transmission of Coxsackie B3 Virus from Human to Chimpanzee, Denmark". Emerging Infectious
Diseases 18 7 (2012): 1163-1165. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000306034600023&KeyUID=WOS:000306034600023.
10.3201/eid1807.111689
- Cappellini, Enrico; Jensen, Lars J.; Szklarczyk, Damian; Ginolhac, Aurelien; da Fonseca, Rute A. R.; Stafford, Thomas W.,
Jr.; Holen, Steven R.; et al. "Proteomic Analysis of a Pleistocene Mammoth Femur Reveals More than One Hundred Ancient Bone
Proteins". Journal of Proteome Research 11 2 (2012): 917-926. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000300458300035&KeyUID=WOS:000300458300035.
10.1021/pr200721u
- Schnell, Ida Baerholm; Thomsen, Philip Francis; Wilkinson, Nicholas; Rasmussen, Morten; Jensen, Lars R. D.; Willerslev, Eske;
Bertelsen, Mads F.; Gilbert, M. Thomas P.. "Screening mammal biodiversity using DNA from leeches". Current Biology
22 8 (2012): R262-R263. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000303288300005&KeyUID=WOS:000303288300005.
10.1016/j.cub.2012.02.058
- Lorenzen, Eline D.; Nogués-Bravo, David; Orlando, Ludovic; Weinstock, Jaco; Binladen, Jonas; Marske, Katharine A.; Ugan, Andrew;
et al. "Species-specific responses of Late Quaternary megafauna to climate and humans". Nature 479 7373 (2012): 359-364.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000297059700037&KeyUID=WOS:000297059700037.
10.1038/nature10574
- Mourier, Tobias; Ho, Simon Y. W.; Gilbert, M. Thomas P.; Willerslev, Eske; Orlando, Ludovic. "Statistical Guidelines for Detecting
Past Population Shifts Using Ancient DNA". Molecular Biology and Evolution 29 9 (2012): 2241-2251. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000308851600017&KeyUID=WOS:000308851600017.
10.1093/molbev/mss094
- Allentoft, Morten E.; Collins, Matthew; Harker, David; Haile, James; Oskam, Charlotte L.; Hale, Marie L.; Campos, Paula F.;
et al. "The half-life of DNA in bone: measuring decay kinetics in 158 dated fossils". Proceedings of the Royal Society
B-Biological Sciences 279 1748 (2012): 4724-4733. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000310566700006&KeyUID=WOS:000310566700006.
10.1098/rspb.2012.1745
- Schnell, I.Bæ.; Thomsen, P.F.; Wilkinson, N.; Rasmussen, M.; Jensen, L.R.D.; Willerslev, E.; Bertelsen, M.F.; Gilbert, M.T.P..
"Erratum: Screening mammal biodiversity using dna from leeches (Current Biology (2012) 22 (R262-R263))". Current Biology
22 20 (2012): http://www.scopus.com/inward/record.url?eid=2-s2.0-84867798359&partnerID=MN8TOARS.
10.1016/j.cub.2012.10.014
- Gilbert, M. T. P.. "The mummy returns ... and sheds new light on old questions". Molecular Ecology 20 20 (2011): 4195-4198.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000296275100001&KeyUID=WOS:000296275100001.
10.1111/j.1365-294X.2011.05265.x
- Orlando, Ludovic; Ginolhac, Aurelien; Raghavan, Maanasa; Vilstrup, Julia; Rasmussen, Morten; Magnussen, Kim; Steinmann, Kathleen
E.; et al. "True single-molecule DNA sequencing of a pleistocene horse bone". Genome Research 21 10 (2011): 1705-1719.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000295407800014&KeyUID=WOS:000295407800014.
10.1101/gr.122747.111
- Foote, Andrew D.; Morin, Phillip A.; Durban, John W.; Willerslev, Eske; Orlando, Ludovic; Gilbert, M. Thomas P.. "Out of the
Pacific and Back Again: Insights into the Matrilineal History of Pacific Killer Whale Ecotypes". Plos One 6 9 (2011):
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000295260400028&KeyUID=WOS:000295260400028.
10.1371/journal.pone.0024980
- Lalueza-Fox, Caries; Gilbert, M. Thomas P.. "Paleogenomics of Archaic Hominins". Current Biology 21 24 (2011): R1002-R1009.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000298440100016&KeyUID=WOS:000298440100016.
10.1016/j.cub.2011.11.021
- Arnold, Lee J.; Roberts, Richard G.; Macphee, Ross D. E.; Haile, James S.; Brock, Fiona; Moller, Per; Froese, Duane G.; et
al. "Paper II - Dirt, dates and DNA: OSL and radiocarbon chronologies of perennially frozen sediments in Siberia, and their
implications for sedimentary ancient DNA studies". Boreas 40 3 (2011): 417-445. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000292106800003&KeyUID=WOS:000292106800003.
10.1111/j.1502-3885.2010.00181.x
- Foote, Andrew D.; Morin, Phillip A.; Durban, John W.; Pitman, Robert L.; Wade, Paul; Willerslev, Eske; Gilbert, M. Thomas
P.; da Fonseca, Rute R.. "Positive selection on the killer whale mitogenome". Biology Letters 7 1 (2011): 116-118.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000286135000035&KeyUID=WOS:000286135000035.
10.1098/rsbl.2010.0638
- Waters, Michael R.; Stafford, Thomas W., Jr.; McDonald, H. Gregory; Gustafson, Carl; Rasmussen, Morten; Cappellini, Enrico;
Olsen, Jesper V.; et al. "Pre-Clovis Mastodon Hunting 13,800 Years Ago at the Manis Site, Washington". Science 334
6054 (2011): 351-353. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000296052500046&KeyUID=WOS:000296052500046.
10.1126/science.1207663
- Allentoft, Morten E.; Oskam, Charlotte; Houston, Jayne; Hale, Marie L.; Gilbert, M. Thomas P.; Rasmussen, Morten; Spencer,
Peter; et al. "Profiling the Dead: Generating Microsatellite Data from Fossil Bones of Extinct Megafauna-Protocols, Problems,
and Prospects". Plos One 6 1 (2011): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000286834300115&KeyUID=WOS:000286834300115.
10.1371/journal.pone.0016670
- Lalueza-Fox, Carles; Rosas, Antonio; de la Rasilla, Marco; Gilbert, M. Thomas P.; Willerslev, Eske. "Reply to Vigilant and
Langergraber: Patrilocality in Neandertals is still the most plausible explanation". Proceedings of the National Academy
of Sciences of the United States of America 108 18 (2011): E88-E88. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000290203100002&KeyUID=WOS:000290203100002.
10.1073/pnas.1103479108
- White, Nicole E.; Phillips, Matthew J.; Gilbert, M. Thomas P.; Alfaro-Nunez, Alonzo; Willerslev, Eske; Mawson, Peter R.; Spencer,
Peter B. S.; Bunce, Michael. "The evolutionary history of cockatoos (Aves: Psittaciformes: Cacatuidae)". Molecular Phylogenetics
and Evolution 59 3 (2011): 615-622. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000290609000007&KeyUID=WOS:000290609000007.
10.1016/j.ympev.2011.03.011
- Takamiya, Monica; Ozen, Asli; Rasmussen, Morten; Alter, Thomas; Gilbert, Tom; Ussery, Dave W.; Knochel, Susanne. "Genome Sequence
of Campylobacter jejuni strain 327, a strain isolated from a turkey slaughterhouse". Standards in Genomic Sciences
4 2 (2011): 113-122. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000292340300001&KeyUID=WOS:000292340300001.
10.4056/sigs.1313504
- Takamiya, Monica; Ozen, Asli; Rasmussen, Morten; Alter, Thomas; Gilbert, Tom; Ussery, Dave W.; Knochel, Susanne. "Genome Sequences
of Two Stress-Tolerant Campylobacter jejuni Poultry Strains, 305 and DFVF1099". Journal of bacteriology 193 19 (2011):
5546-5547. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000294826200063&KeyUID=WOS:000294826200063.
10.1128/JB.05753-11
- Fordyce, Sarah L.; Avila-Arcos, Maria C.; Rockenbauer, Eszter; Borsting, Claus; Frank-Hansen, Rune; Petersen, Frederik Torp;
Willerslev, Eske; et al. "High-throughput sequencing of core STR loci for forensic genetic investigations using the Roche
Genome Sequencer FLX platform". Biotechniques 51 2 (2011): 127-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000294146600015&KeyUID=WOS:000294146600015.
10.2144/000113721
- Razgour, Orly; Clare, Elizabeth L.; Zeale, Matt R. K.; Hanmer, Julia; Schnell, Ida Baerholm; Rasmussen, Morten; Gilbert, Thomas
P.; Jones, Gareth. "High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species".
Ecology and Evolution 1 4 (2011): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000312441500010&KeyUID=WOS:000312441500010.
10.1002/ece3.49
- Ginolhac, Aurelien; Rasmussen, Morten; Gilbert, M. Thomas P.; Willerslev, Eske; Orlando, Ludovic. "mapDamage: testing for
damage patterns in ancient DNA sequences". Bioinformatics 27 15 (2011): 2153-2155. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000292778700022&KeyUID=WOS:000292778700022.
10.1093/bioinformatics/btr347
- Vilstrup, Julia T.; Ho, Simon Y. W.; Foote, Andrew D.; Morin, Phillip A.; Kreb, Danielle; Kruetzen, Michael; Parra, Guido
J.; et al. "Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae". Bmc Evolutionary
Biology 11 (2011): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000289414100001&KeyUID=WOS:000289414100001.
10.1186/1471-2148-11-65
- Bohmann, Kristine; Monadjem, Ara; Noer, Christina Lehmkuhl; Rasmussen, Morten; Zeale, Matt R. K.; Clare, Elizabeth; Jones,
Gareth; Willerslev, Eske; Gilbert, M. Thomas P.. "Molecular Diet Analysis of Two African Free-Tailed Bats (Molossidae) Using
High Throughput Sequencing". Plos One 6 6 (2011): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000292033700086&KeyUID=WOS:000292033700086.
10.1371/journal.pone.0021441
- Rasmussen, Morten; Guo, Xiaosen; Wang, Yong; Lohmueller, Kirk E.; Rasmussen, Simon; Albrechtsen, Anders; Skotte, Line; et
al. "An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia". Science 333 6052 (2011): 94-98.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000295580300047&KeyUID=WOS:000295580300047.
10.1126/science.1211177
- Avila-Arcos, Maria C.; Cappellini, Enrico; Alberto Romero-Navarro, J.; Wales, Nathan; Victor Moreno-Mayar, J.; Rasmussen,
Morten; Fordyce, Sarah L.; et al. "Application and comparison of large-scale solution-based DNA capture-enrichment methods
on ancient DNA". Scientific Reports 1 (2011): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000296052200002&KeyUID=WOS:000296052200002.
10.1038/srep00074
- van Doorn, Nienke L.; Wilson, Andrew S.; Willerslev, Eske; Gilbert, M. Thomas P.. "Bone Marrow and Bone as a Source for Postmortem
RNA". Journal of Forensic Sciences 56 3 (2011): 720-725. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000289892900029&KeyUID=WOS:000289892900029.
10.1111/j.1556-4029.2010.01684.x
- Brandt, Luise Ørsted; Tranekjer, Lena Diana; Mannering, Ulla; Ringgaard, Maj; Frei, Karin Margarita; Willerslev, Eske; Gleba,
Margarita; Gilbert, M. Thomas P.. "Characterising the potential of sheep wool for ancient DNA analyses". Archaeological
and Anthropological Sciences (2011): 1-13. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000208772500006&KeyUID=WOS:000208772500006.
10.1007/s12520-011-0055-2
- Campos, Paula F. P. F.; Gilbert, Thomas M. P. T. M.. "DNA extraction from keratin and chitin". Methods in molecular biology
(Clifton, N.J.) 840 (2011): 43-49. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000321877600007&KeyUID=WOS:000321877600007.
10.1007/978-1-61779-516-9_6
- Skoglund, P.; Gotherstrom, A.; Jakobsson, M.. "Estimation of Population Divergence Times from Non-Overlapping Genomic Sequences:
Examples from Dogs and Wolves". Molecular biology and evolution 28 4 (2011): 1505-1517. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000288556200016&KeyUID=WOS:000288556200016.
10.1093/molbev/msq342
- Foote, Andrew D.; Vilstrup, Julia T.; de Stephanis, Renaud; Verborgh, Philippe; Nielsen, Sandra C. Abel; Deaville, Robert;
Kleivane, Lars; et al. "Genetic differentiation among North Atlantic killer whale populations". Molecular Ecology 20
3 (2011): 629-641. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000286254700015&KeyUID=WOS:000286254700015.
10.1111/j.1365-294X.2010.04957.x
- Lalueza-Fox, Carles; Rosas, Antonio; Estalrrich, Almudena; Gigli, Elena; Campos, Paula F.; Garcia-Tabernero, Antonio; Garcia-Vargas,
Samuel; et al. "Genetic evidence for patrilocal mating behavior among Neandertal groups". Proceedings of the National Academy
of Sciences of the United States of America 108 1 (2011): 250-253. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000285915000048&KeyUID=WOS:000285915000048.
10.1073/pnas.1011553108
- Kampmann, Marie-Louise; Fordyce, Sarah L.; Avila-Arcos, Maria C.; Rasmussen, Morten; Willerslev, Eske; Nielsen, Lars P.; Gilbert,
M. Thomas P.. "A simple method for the parallel deep sequencing of full influenza A genomes". Journal of Virological Methods
178 1-2 (2011): 243-248. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000297451600035&KeyUID=WOS:000297451600035.
10.1016/j.jviromet.2011.09.001
- Bruhn, C.A.W.; Gilbert, M.T.P.. "HIV-2 down, HIV-1 to go? Understanding the possibilities of treatment as prevention". The
Lancet Infectious Diseases 11 4 (2011): 260-261. http://www.scopus.com/inward/record.url?eid=2-s2.0-79953063723&partnerID=MN8TOARS.
10.1016/S1473-3099(11)70037-8
- Rockenbauer, E.; Holgersson, M.B.; Fordyce, S.L.; Arcos, M.C.T.; Børsting, C.; Hansen, A.J.; Frank-Hansen, R.; et al. "Sequences
of microvariant/" off-ladder" STR alleles". Forensic Science International: Genetics Supplement Series 3 1 (2011):
http://www.scopus.com/inward/record.url?eid=2-s2.0-82455192341&partnerID=MN8TOARS.
10.1016/j.fsigss.2011.08.102
- Charlier, Philippe; Huynh-Charlier, Isabelle; Poupon, Joel; Keyser, Christine; Lancelot, Eloise; Favier, Dominique; Vignal,
Jean-Noel; et al. "Christmas 2010: History Multidisciplinary medical identification of a French king's head (Henri IV)". British
Medical Journal 341 (2010): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000285552200010&KeyUID=WOS:000285552200010.
10.1136/bmj.c6805
- Campos, Paula F.; Sher, Andrei; Mead, Jim I.; Tikhonov, Alexei; Buckley, Michael; Collins, Matthew; Willerslev, Eske; Gilbert,
M. Thomas P.. "Clarification of the taxonomic relationship of the extant and extinct ovibovids, Ovibos, Praeovibos, Euceratherium
and Bootherium". Quaternary Science Reviews 29 17-18 (2010): 2123-2130. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000280974300014&KeyUID=WOS:000280974300014.
10.1016/j.quascirev.2010.05.006
- Morin, P. A.; Archer, F. I.; Foote, A. D.; Vilstrup, J.; Allen, E. E.; Wade, P.; Durban, J.; et al. "Complete mitochondrial
genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species". Genome research (2010):
1-10. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000279404700005&KeyUID=WOS:000279404700005.
10.1101/gr.102954.109
- Oskam, Charlotte L.; Haile, James; Mclay, Emma; Rigby, Paul; Allentoft, Morten E.; Olsen, Maia E.; Bengtsson, Camilla; et
al. "Fossil avian eggshell preserves ancient DNA". Proceedings of the Royal Society B-Biological Sciences 277 1690
(2010): 1991-2000. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000278056400007&KeyUID=WOS:000278056400007.
10.1098/rspb.2009.2019
- Campos, Paula F.; Willerslev, Eske; Mead, Jim I.; Hofreiter, Michael; Gilbert, M. Thomas P.. "Molecular identification of
the extinct mountain goat, Oreamnos harringtoni (Bovidae)". Boreas 39 1 (2010): 18-23. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000273015400002&KeyUID=WOS:000273015400002.
10.1111/j.1502-3885.2009.00111.x
- Charlier, P.; Poupon, J.; Eb, A.; De Mazancourt, P.; Gilbert, T.; Huynh-Charlier, I.; Loublier, Y.; et al. "The 'relics of
Joan of Arc': A forensic multidisciplinary analysis". Forensic Science International 194 1-3 (2010): E9-E15. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000273985900024&KeyUID=WOS:000273985900024.
10.1016/j.forsciint.2009.09.006
- Rodriguez, Maria C. Suarez; Edsgärd, Daniel; Hussain, Syed S.; Alquezar, David; Rasmussen, Morten; Gilbert, Thomas; Nielsen,
Bjørn H.; Bartels, Dorothea; Mundy, John. "Transcriptomes of the desiccation-tolerant resurrection plant Craterostigma plantagineum".
The Plant journal : for cell and molecular biology 63 2 (2010): 212-228. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000279750800004&KeyUID=WOS:000279750800004.
10.1111/j.1365-313X.2010.04243.x
- Cappellini, Enrico; Gilbert, M. Thomas P.; Geuna, Filippo; Fiorentino, Girolamo; Hall, Allan; Thomas-Oates, Jane; Ashton,
Peter D.; et al. "A multidisciplinary study of archaeological grape seeds". Naturwissenschaften 97 2 (2010): 205-217.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000274041100010&KeyUID=WOS:000274041100010.
10.1007/s00114-009-0629-3
- Lira, Jaime; Linderholm, Anna; Olaria, Carmen; Durling, Mikael Brandstrom; Gilbert, M. Thomas P.; Ellegren, Hans; Willerslev,
Eske; et al. "Ancient DNA reveals traces of Iberian Neolithic and Bronze Age lineages in modern Iberian horses". Molecular
Ecology 19 1 (2010): 64-78. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000273005800009&KeyUID=WOS:000273005800009.
10.1111/j.1365-294X.2009.04430.x
- Campos, Paula F.; Kristensen, Tommy; Orlando, Ludovic; Sher, Andrei; Kholodova, Marina V.; Gotherstrom, Anders; Hofreiter,
Michael; et al. "Ancient DNA sequences point to a large loss of mitochondrial genetic diversity in the saiga antelope (Saiga
tatarica) since the Pleistocene". Molecular Ecology 19 22 (2010): 4863-4875. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000283986700005&KeyUID=WOS:000283986700005.
10.1111/j.1365-294X.2010.04826.x
- Rasmussen, Morten; Li, Yingrui; Lindgreen, Stinus; Pedersen, Jakob Skou; Albrechtsen, Anders; Moltke, Ida; Metspalu, Mait;
et al. "Ancient human genome sequence of an extinct Palaeo-Eskimo". Nature 463 7282 (2010): 757-762. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000274394300029&KeyUID=WOS:000274394300029.
10.1038/nature08835
- Ho, Simon Y. W.; Gilbert, M. Thomas P.. "Ancient mitogenomics". Mitochondrion 10 1 (2010): 1-11. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000273673100001&KeyUID=WOS:000273673100001.
10.1016/j.mito.2009.09.005
- Schnell, Ida Baerholm; Fraser, Magdalena; Willerslev, Eske; Gilbert, M. Thomas P.. "Characterisation of insect and plant origins
using DNA extracted from small volumes of bee honey". Arthropod-Plant Interactions 4 2 (2010): 107-116. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000277541300004&KeyUID=WOS:000277541300004.
10.1007/s11829-010-9089-0
- Campos, P.F.; Willerslev, E.; Sher, A.; Orlando, L.; Axelsson, E.; Tikhonov, A.; Aaris-Sørensen, K.; et al. "Ancient DNA analyses
exclude humans as the driving force behind late Pleistocene musk ox (Ovibos moschatus) population dynamics". Proceedings
of the National Academy of Sciences of the United States of America 107 12 (2010): 5675-5680. http://www.scopus.com/inward/record.url?eid=2-s2.0-77950437916&partnerID=MN8TOARS.
10.1073/pnas.0907189107
- Katzourakis, A.; Gifford, R.J.; Tristem, M.; Gilbert, M.T.P.; Pybus, O.G.. "Paleovirology reveals the macroevolution of complex
retroviruses". Retrovirology 6 SUPPL. 2 (2009): http://www.scopus.com/inward/record.url?eid=2-s2.0-71049143876&partnerID=MN8TOARS.
- Martin Bay Hebsgaard; M Thomas P Gilbert; Jette Arneborg Pedersen; Patricia Heyn; Morten Erik Allentoft; Michael Bunce; Kasper
Munch; Charles Schweger; Eske Willerslev. "The Farm beneath the Sand". Antiquity 83 (2009): 430-444. https://curis.ku.dk/portal/en/publications/the-farm-beneath-the-sand(5336e2e0-25f7-11df-8ed1-000ea68e967b).html.
- Jaco Weinstock; M Thomas P Gilbert; Eske Willerslev. "The late Pleistocene distribution of vicunas (Vicugna vicugna) and the
"extinction" of the gracile Llama ("Lama gracilis")". Quaternary Science Reviews 28 (2009): 1369-1373. https://curis.ku.dk/portal/en/publications/the-late-pleistocene-distribution-of-vicunas-vicugna-vicugna-and-the-extinction-of-the-gracile-llama-lama-gracilis(541573e0-2b59-11df-8ed1-000ea68e967b).html.
- Katzourakis, Aris; Gifford, Robert J.; Tristem, Michael; Gilbert, M. Thomas P.; Pybus, Oliver G.. "Macroevolution of Complex
Retroviruses". Science 325 5947 (2009): 1512-1512. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000269887900029&KeyUID=WOS:000269887900029.
10.1126/science.1174149
- Thomsen, Philip Francis; Elias, Scott; Gilbert, M. Thomas P.; Haile, James; Munch, Kasper; Kuzmina, Svetlana; Froese, Duane
G.; et al. "Non-Destructive Sampling of Ancient Insect DNA". Plos One 4 4 (2009): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000265500600013&KeyUID=WOS:000265500600013.
10.1371/journal.pone.0005048
- King, Gary A.; Gilbert, M. Thomas P.; Willerslev, Eske; Collins, Matthew J.; Kenward, Harry. "Recovery of DNA from archaeological
insect remains: first results, problems and potential". Journal of Archaeological Science 36 5 (2009): 1179-1183. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000264949100009&KeyUID=WOS:000264949100009.
10.1016/j.jas.2009.01.006
- Rasmussen, Morten; Cummings, Linda Scott; Gilbert, M. Thomas P.; Bryant, Vaughn; Smith, Colin; Jenkins, Dennis L.; Willerslev,
Eske. "Response to Comment by Goldberg et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"". Science
325 5937 (2009): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000267802000025&KeyUID=WOS:000267802000025.
10.1126/science.1167672
- Gilbert, M. Thomas P.; Jenkins, Dennis L.; Higham, Thomas F. G.; Rasmussen, Morten; Malmstrom, Helena; Svensson, Emma M.;
Sanchez, Juan J.; et al. "Response to Comment by Poinar et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"".
Science 325 5937 (2009): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000267802000023&KeyUID=WOS:000267802000023.
10.1126/science.1168457
- Weinstock, Jaco; Shapiro, Beth; Prieto, Alfredo; Carlos Marin, Juan; Gonzalez, Benito A.; Gilbert, M. Thomas P.; Willersleva,
Eske. "The Late Pleistocene distribution of vicunas (Vicugna vicugna) and the "extinction" of the gracile llama ("Lama gracilis"):
New molecular data". Quaternary Science Reviews 28 15-16 (2009): 1369-1373. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000268048900001&KeyUID=WOS:000268048900001.
10.1016/j.quascirev.2009.03.008
- Miller, Webb; Drautz, Daniela I.; Janecka, Jan E.; Lesk, Arthur M.; Ratan, Aakrosh; Tomsho, Lynn P.; Packard, Mike; et al.
"The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)". Genome Research 19 2 (2009):
213-220. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000263132600005&KeyUID=WOS:000263132600005.
10.1101/gr.082628.108
- Hebsgaard, Martin B.; Gilbert, M. Thomas P.; Arneborg, Jette; Heyn, Patricia; Allentoft, Morten E.; Bunce, Michael; Munch,
Kasper; Schweger, Charles; Willerslev, Eske. "'The Farm Beneath the Sand' - an archaeological case study on ancient 'dirt'
DNA". Antiquity 83 320 (2009): 430-444. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000267519000012&KeyUID=WOS:000267519000012.
- Gigli, Elena; Rasmussen, Morten; Civit, Sergi; Rosas, Antonio; de la Rasilla, Marco; Fortea, Javier; Gilbert, M. Thomas P.;
Willerslev, Eske; Lalueza-Fox, Carles. "An improved PCR method for endogenous DNA retrieval in contaminated Neandertal samples
based on the use of blocking primers". Journal of Archaeological Science 36 12 (2009): 2676-2679. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000271796600008&KeyUID=WOS:000271796600008.
10.1016/j.jas.2009.08.004
- Willerslev, Eske; Gilbert, M. Thomas P.; Binladen, Jonas; Ho, Simon Y. W.; Campos, Paula F.; Ratan, Aakrosh; Tomsho, Lynn
P.; et al. "Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution".
Bmc Evolutionary Biology 9 (2009): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000267757500001&KeyUID=WOS:000267757500001.
10.1186/1471-2148-9-95
- Malmstrom, Helena; Gilbert, M. Thomas P.; Thomas, Mark G.; Brandstrom, Mikael; Stora, Jan; Molnar, Petra; Andersen, Pernille
K.; et al. "Ancient DNA Reveals Lack of Continuity between Neolithic Hunter-Gatherers and Contemporary Scandinavians". Current
Biology 19 20 (2009): 1758-1762. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000271498400034&KeyUID=WOS:000271498400034.
10.1016/j.cub.2009.09.017
- Haile, James; Froese, Duane G.; MacPhee, Ross D. E.; Roberts, Richard G.; Arnold, Lee J.; Reyes, Alberto V.; Rasmussen, Morten;
et al. "Ancient DNA reveals late survival of mammoth and horse in interior Alaska". Proceedings of the National Academy
of Sciences of the United States of America 106 52 (2009): 22352-22357. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000273178700057&KeyUID=WOS:000273178700057.
10.1073/pnas.0912510106
- Mikkelsen, Martin; Rockenbauer, Eszter; Wã Chter, Andrea; Fendt, Liane; Zimmermann, Bettina; Parson, Walther; Nielsen, Sandra
Abel; et al. "Application of full mitochondrial genome sequencing using 454 GS FLX pyrosequencing". Forensic Science International:
Genetics Supplement Series (2009): 1-2.
papers2://publication/doi/10.1016/j.fsigss.2009.09.028
- Foote, Andrew D.; Newton, Jason; Piertney, Stuart B.; Willerslev, Eske; Gilbert, M. Thomas P.. "Ecological, morphological
and genetic divergence of sympatric North Atlantic killer whale populations". Molecular Ecology 18 24 (2009): 5207-5217.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000272452700019&KeyUID=WOS:000272452700019.
10.1111/j.1365-294X.2009.04407.x
- Allentoft, Morten E.; Schuster, Stephan C.; Holdaway, Richard N.; Hale, Marie L.; McLay, Emma; Oskam, Charlotte; Gilbert,
M. Thomas P.; et al. "Identification of microsatellites from an extinct moa species using high-throughput (454) sequence data".
Biotechniques 46 3 (2009): 195-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000266095800008&KeyUID=WOS:000266095800008.
10.2144/000113086
- Gary Andrew King; M Thomas P Gilbert; Eske Willerslev; Matthew Collins; Harry Kenward. "Recovery of DNA from archaeological
insect remains: first results, problems and potential". Journal of Archaeological Science 36 (2009): 1179-1183. https://curis.ku.dk/portal/en/publications/recovery-of-dna-from-archaeological-insect-remains-first-results-problems-and-potential(b13f17b0-2b59-11df-8ed1-000ea68e967b).html.
- Gilbert, M. Thomas P.; Kivisild, Toomas; Gronnow, Bjarne; Andersen, Pernille K.; Metspalu, Ene; Reidla, Maere; Tamm, Erika;
et al. "Paleo-Eskimo mtDNA genome reveals matrilineal discontinuity in Greenland". Science 320 5884 (2008): 1787-1789.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000257121200042&KeyUID=WOS:000257121200042.
10.1126/science.1159750
- Melchior, L.; Gilbert, M. T. P.; Kivisild, T.; Lynnerup, N.; Dissingl, J.. "Rare mtDNA haplogroups and genetic differences
in rich and poor Danish iron-age villages". American Journal of Physical Anthropology 135 2 (2008): 206-215. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000252345400008&KeyUID=WOS:000252345400008.
10.1002/ajpa.20721
- Worobey, M.; Pitchenik, A. E.; Gilbert, M. T. P.; Wlasiuk, G.; Rambaut, A.. "Reply to Pape et al: The phylogeography of HIV-1
group M subtype B". Proceedings of the National Academy of Sciences (2008):
papers2://publication/uuid/9ECDEFB5-616E-4CCF-8259-65F3C343E6E7
- Gilbert, M. Thomas P.; Miller, Webb; Schuster, Stephan C.. "Response to Comment on "Whole-Genome Shotgun Sequencing of Mitochondria
from Ancient Hair Shafts"". Science 322 5903 (2008): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000260674100019&KeyUID=WOS:000260674100019.
10.1126/science.1158565
- Axelsson, Erik; Willerslev, Eske; Gilbert, M. Thomas P.; Nielsen, Rasmus. "The effect of ancient DNA damage on inferences
of demographic histories". Molecular Biology and Evolution 25 10 (2008): 2181-2187. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000259327900010&KeyUID=WOS:000259327900010.
10.1093/molbev/msn163
- Malmstrom, Helena; Vila, Carles; Gilbert, M. Thomas P.; Stora, Jan; Willerslev, Eske; Holmlund, Gunilla; Gotherstrom, Anders.
"Barking up the wrong tree: Modern northern European dogs fail to explain their origin". Bmc Evolutionary Biology 8
(2008): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000254663500001&KeyUID=WOS:000254663500001.
10.1186/1471-2148-8-71
- Buckley, Mike; Walker, Angela; Ho, Simon Y. W.; Yang, Yue; Smith, Colin; Ashton, Peter; Oates, Jane Thomas; et al. "Comment
on "protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry"". Science 319 5859 (2008):
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000252084000011&KeyUID=WOS:000252084000011.
10.1126/science.1147046
- Worobey, Michael; Gemmel, Marlea; Teuwen, Dirk E.; Haselkorn, Tamara; Kunstman, Kevin; Bunce, Michael; Muyembe, Jean-Jacques;
et al. "Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960". Nature 455 7213 (2008): 661-U57. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000259639700046&KeyUID=WOS:000259639700046.
10.1038/nature07390
- Gilbert, M. Thomas P.; Jenkins, Dennis L.; Gotherstrom, Anders; Naveran, Nuria; Sanchez, Juan J.; Hofreiter, Michael; Thomsen,
Philip Francis; et al. "DNA from pre-Clovis human coprolites in Oregon, North America". Science 320 5877 (2008): 786-789.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000255644400038&KeyUID=WOS:000255644400038.
10.1126/science.1154116
- Wyatt, Kelly B.; Campos, Paula F.; Gilbert, M. Thomas P.; Kolokotronis, Sergios-Orestis; Hynes, Wayne H.; DeSalle, Rob; Daszak,
Peter; MacPhee, Ross D. E.; Greenwood, Alex D.. "Historical Mammal Extinction on Christmas Island (Indian Ocean) Correlates
with Introduced Infectious Disease". Plos One 3 11 (2008): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000265134400002&KeyUID=WOS:000265134400002.
10.1371/journal.pone.0003602
- Gilbert, M. Thomas P.; Drautz, Daniela I.; Lesk, Arthur M.; Ho, Simon Y. W.; Qi, Ji; Ratan, Aakrosh; Hsu, Chih-Hao; et al.
"Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes". Proceedings of
the National Academy of Sciences of the United States of America 105 24 (2008): 8327-8332. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000257011200030&KeyUID=WOS:000257011200030.
10.1073/pnas.0802315105
- Michael Worobey; Arthur E Pitchenik; M Thomas P Gilbert; Gabriela Wlasiuk; Andrew Rambaut. "Reply to Pape et al.: the phylogeography
of HIV-1 group M subtype B.". Proceedings of the National Academy of Science of the United States of America 105 12
(2008): E16-E16. https://curis.ku.dk/portal/en/publications/reply-to-pape-et-al-the-phylogeography-of-hiv1-group-m-subtype-b(22851270-1492-11dd-bee9-02004c4f4f50).html.
10.1073/pnas.0712128105
- Vives, S.; Gilbert, M.T.; Arenas, C.; Gigli, E.; Lao, O.; Lalueza-Fox, C.. "Statistical analysis of post mortem DNA damage-derived
miscoding lesions in Neandertal mitochondrial DNA". BMC Research Notes 1 (2008): http://www.scopus.com/inward/record.url?eid=2-s2.0-77955777521&partnerID=MN8TOARS.
10.1186/1756-0500-1-40
- Gilbert, Campos Willerslev. "Isolation of DNA from Ancient Samples". Handbook of Nucleic Acids Purification (2008):
1-22.
papers2://publication/uuid/83AC6F72-A8FC-4321-AE7D-7F61B6D4FED5
- Gilbert, Marcus T. P.; Sanchez, Juan J.; Haselkorn, Tamara; Jewell, Laurence D.; Lucas, Sebastian B.; Van Marck, Eric; Borsting,
Claus; Morling, Niels; Worobey, Michael. "Multiplex PCR with minisequencing as an effective high-throughput SNP typing method
for formalin-fixed tissue". Electrophoresis 28 14 (2007): 2361-2367. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000248390900005&KeyUID=WOS:000248390900005.
10.1002/elps.200600589
- Gilbert, M. Thomas P.; Binladen, Jonas; Miller, Webb; Wiuf, Carsten; Willerslev, Eske; Poinar, Hendrik; Carlson, John E.;
Leebens-Mack, James H.; Schuster, Stephan C.. "Recharacterization of ancient DNA miscoding lesions: insights in the era of
sequencing-by-synthesis". Nucleic Acids Research 35 1 (2007): 1-10. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000243805800008&KeyUID=WOS:000243805800008.
10.1093/nar/gkl483
- Gilbert, M. Thomas P.; Willerslev, Eske. "Rescuing ancient DNA". Nature Biotechnology 25 8 (2007): 872-874. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000248725800020&KeyUID=WOS:000248725800020.
10.1038/nbt0807-872
- Wilson,; Taylor,; Ceruti,; Chavez,; Reinhard,; Grimes,; Meier, Augenstein; et al. "Stable isotope and DNA evidence for ritual
sequences in Inca child sacrifice". Proceedings of the National Academy of Sciences of the United States of America
(2007): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000250373400015&KeyUID=WOS:000250373400015.
10.1073/pnas.0704276104
- Gilbert, M. Thomas P.; Rambaut, Andrew; Wlasiuk, Gabriela; Spira, Thomas J.; Pitchenik, Arthur E.; Worobey, Michael. "The
emergence of HIV/AIDS in the Americas and beyond". Proceedings of the National Academy of Sciences of the United States
of America 104 47 (2007): 18566-18570. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000251292500041&KeyUID=WOS:000251292500041.
10.1073/pnas.0705329104
- Gilbert, M. Thomas P.; Haselkorn, Tamara; Bunce, Michael; Sanchez, Juan J.; Lucas, Sebastian B.; Jewell, Laurence D.; Van
Marck, Eric; Worobey, Michael. "The Isolation of Nucleic Acids from Fixed, Paraffin-Embedded Tissues-Which Methods Are Useful
When?". Plos One 2 6 (2007): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000207451700005&KeyUID=WOS:000207451700005.
10.1371/journal.pone.0000537
- Vuissoz, Annick; Worobey, Michael; Odegaard, Nancy; Bunce, Michael; Machado, Carlos A.; Lynnerup, Niels; Peacock, Elizabeth
E.; Gilbert, M. Thomas P.. "The survival of PCR-amplifiable DNA in cow leather". Journal of Archaeological Science
34 5 (2007): 823-829. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000245508800016&KeyUID=WOS:000245508800016.
10.1016/j.jas.2006.09.002
- Kuch, Melanie; Grocke, Darren R.; Knyf, Martin C.; Gilbert, M. Thomas P.; Younghusband, Ban; Young, Terry; Marshall, Ingeborg;
et al. "A preliminary analysis of the DNA and diet of the extinct Beothuk: A systematic approach to ancient human DNA". American
Journal of Physical Anthropology 132 4 (2007): 594-604. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000245160500013&KeyUID=WOS:000245160500013.
10.1002/ajpa.20536
- Johnson, Sarah Stewart; Hebsgaard, Martin B.; Christensen, Torben R.; Mastepanov, Mikhail; Nielsen, Rasmus; Munch, Kasper;
Brand, Tina; et al. "Ancient bacteria show evidence of DNA repair (vol 104, pg 14401, 2007)". Proceedings of the National
Academy of Sciences of the United States of America 104 51 (2007): 20635-20635. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000251885000087&KeyUID=WOS:000251885000087.
10.1073/pnas.0710637105
- Willerslev, Eske; Cappellini, Enrico; Boomsma, Wouter; Nielsen, Rasmus; Hebsgaard, Martin B.; Brand, Tina B.; Hofreiter, Michael;
et al. "Ancient biomolecules from deep ice cores reveal a forested southern Greenland". Science (New York, NY) 317
5834 (2007): 111-114. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000247776700062&KeyUID=WOS:000247776700062.
10.1126/science.1141758
- Haile, James; Holdaway, Richard; Oliver, Karen; Bunce, Michael; Gilbert, M. Thomas P.; Nielsen, Rasmus; Munch, Kasper; et
al. "Ancient DNA chronology within sediment deposits: Are paleobiological reconstructions possible and is DNA leaching a factor?".
Molecular Biology and Evolution 24 4 (2007): 982-989. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000245353200011&KeyUID=WOS:000245353200011.
10.1093/molbev/msm016
- Toepf, A. L.; Gilbert, M. T. P.; Fleischer, R. C.; Hoelzel, A. R.. "Ancient human mtDNA genotypes from England reveal lost
variation over the last millennium". Biology Letters 3 5 (2007): 550-553. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000249421800028&KeyUID=WOS:000249421800028.
10.1098/rsbl.2007.0269
- Gilbert, M. Thomas P.; Moore, Wendy; Melchior, Linea; Worobey, Michael. "DNA Extraction from Dry Museum Beetles without Conferring
External Morphological Damage". Plos One 2 3 (2007): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000207444700007&KeyUID=WOS:000207444700007.
10.1371/journal.pone.0000272
- Hebsgaard, Martin B.; Wiuf, Carsten; Gilbert, M. Thomas P.; Glenner, Henrik; Willerslev, Eske. "Evaluating neanderthal genetics
and phylogeny". Journal of Molecular Evolution 64 1 (2007): 50-60. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000243047800005&KeyUID=WOS:000243047800005.
10.1007/s00239-006-0017-y
- Malmstrom, Helena; Svensson, Emma M.; Gilbert, M. Thomas P.; Willerslev, Eske; Gotherstrom, Anders; Holmlund, Gunilla. "More
on contamination: The use of asymmetric molecular behavior to identify authentic ancient human DNA". Molecular Biology
and Evolution 24 4 (2007): 998-1004. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000245353200013&KeyUID=WOS:000245353200013.
10.1093/molbev/msm015
- Binladen, Jonas; Gilbert, M. Thomas P.; Campos, Paula F.; Willerslev, Eske. "5 '-Tailed sequencing primers improve sequencing
quality of PCR products". Biotechniques 42 2 (2007): 172-+. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000248949000017&KeyUID=WOS:000248949000017.
10.2144/000112316
- Binladen, Jonas; Gilbert, M. Thomas P.; Willerslev, Eske. "800000 year old mammoth DNA, modern elephant DNA or PCR artefact?".
Biology Letters 3 1 (2007): 55-56. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000243485800016&KeyUID=WOS:000243485800016.
10.1098/rsbl.2006.0537
- Gilbert, M.T.P.; Djurhuus, D.; Melchior, L.; Lynnerup, N.; Worobey, M.; Wilson, A.S.; Andreasen, C.; Dissing, J.. "Erratum:
mtDNA from hair and nail clarifies the genetic relationship of the 15th century Qilakitsoq Inuit mummies (American Journal
of Physical Anthropology (2007) 133, (847-853))". American Journal of Physical Anthropology 133 4 (2007): http://www.scopus.com/inward/record.url?eid=2-s2.0-34547431146&partnerID=MN8TOARS.
10.1002/ajpa.20675
- Johnson, S.S.; Hebsgaard, M.B.; Christensen, T.R.; Mastepanov, M.; Nielsen, R.; Munch, K.; Brand, T.; et al. "Ancient bacteria
show evidence of DNA repair". Proceedings of the National Academy of Sciences of the United States of America 104 36
(2007): 14401-14405. http://www.scopus.com/inward/record.url?eid=2-s2.0-35448994420&partnerID=MN8TOARS.
10.1073/pnas.0706787104
- A. Vuissoz; M. Worobey; N. Odegaard; M. Bunce; C.A. Machado; Niels Lynnerup; E.E. Peacock; M Thomas P Gilbert. "The survival
of PCR-amplifiable DNA in cow leather15". Journal of Archaeological Science 34 5 (2007): 823-829. https://curis.ku.dk/portal/en/publications/the-survival-of-pcramplifiable-dna-in-cow-leather15(5ddedc00-20ec-11dd-bc23-000ea68e967b).html.
- Gilbert, M. Thomas P.; Djurhuus, Durita; Melchior, Linea; Lynnerup, Niels; Worobey, Michael; Wilson, Andrew S.; Andreasen,
Claus; Dissing, Jørgen. "mtDNA from hair and nail clarifies the genetic relationship of the 15th century Qilakitsoq Inuit
mummies". American Journal of Physical Anthropology 133 2 (2007): 847-853. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000246657300012&KeyUID=WOS:000246657300012.
10.1002/ajpa.20602
- Binladen, Jonas; Gilbert, M. Thomas P.; Bollback, Jonathan P.; Panitz, Frank; Bendixen, Christian; Nielsen, Rasmus; Willerslev,
Eske. "The Use of Coded PCR Primers Enables High-Throughput Sequencing of Multiple Homolog Amplification Products by 454 Parallel
Sequencing". Plos One 2 2 (2007): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000207444400002&KeyUID=WOS:000207444400002.
10.1371/journal.pone.0000197
- Gilbert, M. Thomas P.; Tomsho, Lynn P.; Rendulic, Snjezana; Packard, Michael; Drautz, Daniela I.; Sher, Andrei; Tikhonov,
Alexei; et al. "Whole-genome shotgun sequencing of mitochondria from ancient hair shafts". Science 317 5846 (2007):
1927-1930. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000249764300041&KeyUID=WOS:000249764300041.
10.1126/science.1146971
- Gilbert, M.T.; Willerslev, E.. "Authenticity in ancient DNA studies.". Medicina nei secoli 18 3 (2006): 701-723. http://www.scopus.com/inward/record.url?eid=2-s2.0-38949163103&partnerID=MN8TOARS.
- Topf, AL; Gilbert, MTP; Dumbacher, JP; Hoelzel, AR. "Tracing the phylogeography of human populations in Britain based on 4th-11th
century mtDNA genotypes". Molecular Biology and Evolution 23 1 (2006): 152-161. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000233843900018&KeyUID=WOS:000233843900018.
10.1093/molbev/msj013
- Sampietro, Maria Lourdes; Gilbert, M. Thomas P.; Lao, Oscar; Caramelli, David; Lari, Martina; Bertranpetit, Jaume; Lalueza-Fox,
Carles. "Tracking down human contamination in ancient human teeth". Molecular Biology and Evolution 23 9 (2006): 1801-1807.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000239905100019&KeyUID=WOS:000239905100019.
10.1093/molbev/msl047
- Gilbert, M. T. P.; Willerslev, E.. "Ancient Plant DNA". Encyclopedia of Quaternary Sciences (2006):
papers2://publication/uuid/5609DAA9-D42B-4B56-A260-A1C1142E0F91
- Binladen, J; Wiuf, C; Gilbert, MTP; Bunce, M; Barnett, R; Larson, G; Greenwood, AD; et al. "Assessing the fidelity of ancient
DNA sequences amplified from nuclear genes". Genetics 172 2 (2006): 733-741. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000236178800005&KeyUID=WOS:000236178800005.
10.1534/genetics.105.049718
- Gilbert, M. T. P.; Janaway, R. C.; Tobin, D. J.; Cooper, A.; Wilson, A. S.. "Histological correlates of post mortem mitochondrial
DNA damage in degraded hair". Forensic Science International 156 2-3 (2006): 201-207. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000235196200018&KeyUID=WOS:000235196200018.
10.1016/j.forsciint.2005.02.019
- Gilbert, MTP; Hansen, AJ; Willerslev, E; Turner-Walker, G; Collins, M. "Insights into the processes behind the contamination
of degraded human teeth and bone samples with exogenous sources of DNA". International Journal of Osteoarchaeology
16 2 (2006): 156-164. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000237365200007&KeyUID=WOS:000237365200007.
10.1002/oa.832
- Shapiro, Beth; Rambaut, Andrew; Gilbert, M. Thomas P.. "No proof that typhoid caused the Plague of Athens (a reply to Papagrigorakis
et al.)". International Journal of Infectious Diseases 10 4 (2006): 334-335. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000239341400015&KeyUID=WOS:000239341400015.
10.1016/j.ijid.2006.02.006
- Gilbert, MTP; Menez, L; Janaway, RC; Tobin, DJ; Cooper, A; Wilson, AS. "Resistance of degraded hair shafts to contaminant
DNA". Forensic Science International 156 2-3 (2006): 208-212. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000235196200019&KeyUID=WOS:000235196200019.
10.1016/j.forsciint.2005.02.021
- Gilbert, MTP; Shapiro, B; Drummond, A; Cooper, A. "Post-mortem DNA damage hotspots in Bison (Bison bison) provide evidence
for both damage and mutational hotspots in human mitochondrial DNA". Journal of Archaeological Science 32 7 (2005):
1053-1060. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000229879900009&KeyUID=WOS:000229879900009.
10.1016/j.jas.2005.02.006
- Gilbert, MTP; Bandelt, HJ; Hofreiter, M; Barnes, I. "Assessing ancient DNA studies". Trends in Ecology & Evolution
20 10 (2005): 541-544. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000232606900005&KeyUID=WOS:000232606900005.
10.1016/j.tree.2005.07.005
- Lydolph, MC; Jacobsen, J; Arctander, P; Gilbert, MTP; Gilichinsky, DA; Hansen, AJ; Willerslev, E; Lange, L. "Beringian paleoecology
inferred from permafrost-preserved fungal DNA". Applied and Environmental Microbiology 71 2 (2005): 1012-1017. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000227043400053&KeyUID=WOS:000227043400053.
10.1128/AEM.71.2.1012-1017.2005
- Gilbert, MTP; Rudbeck, L; Willerslev, E; Hansen, AJ; Smith, C; Penkman, KEH; Prangenberg, K; et al. "Biochemical and physical
correlates of DNA contamination in archaeological human bones and teeth excavated at Matera, Italy". Journal of Archaeological
Science 32 5 (2005): 785-793. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000228307700012&KeyUID=WOS:000228307700012.
10.1016/j.jas.2004.12.008
- Machado, Carlos A.; Robbins, Nancy; Gilbert, M. Thomas P.; Herre, Edward Allen. "Critical review of host specificity and its
coevolutionary implications in the fig/fig-wasp mutualism". Proceedings of the National Academy of Sciences of the United
States of America 102 Suppl (2005): 6558-6565. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000229023700008&KeyUID=WOS:000229023700008.
10.1073/pnas.0501840102
- Gilbert, MTP; Barnes, I; Collins, MJ; Smith, C; Eklund, J; Goudsmit, J; Poinar, H; Cooper, A. "Long-term survival of ancient
DNA in Egypt: Response to Zink and Nerlich (2003)". American Journal of Physical Anthropology 128 1 (2005): 110-114.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000231617400010&KeyUID=WOS:000231617400010.
10.1002/ajpa.20045
- Rudbeck, L; Gilbert, MTP; Willerslev, E; Hansen, AJ; Lynnerup, N; Christensen, T; Dissing, J. "mtDNA analysis of human remains
from an early Danish Christian cemetery". American Journal of Physical Anthropology 128 2 (2005): 424-429. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000232239800017&KeyUID=WOS:000232239800017.
10.1002/ajpa.20294
- Metspalu, M; Kivisild, T; Metspalu, E; Parik, J; Hudjashov, G; Kaldma, K; Serk, P; et al. "Most of the extant mtDNA boundaries
in South and Southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans". Bmc
Genetics 5 (2004): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000223865600001&KeyUID=WOS:000223865600001.
10.1186/1471-2156-5-26
- Gilbert, MTP; Cuccui, J; White, W; Lynnerup, N; Titball, RW; Cooper, A; Prentice, MB. "Response to Drancourt and Raoult".
Microbiology-Sgm 150 (2004): 264-265. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000188841500003&KeyUID=WOS:000188841500003.
10.1099/mic.0.26959-0
- Shapiro, B; Drummond, AJ; Rambaut, A; Wilson, MC; Matheus, PE; Sher, AV; Pybus, OG; et al. "Rise and fall of the Beringian
steppe bison". Science 306 5701 (2004): 1561-1565. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000225442700061&KeyUID=WOS:000225442700061.
10.1126/science.1101074
- Lalueza-Fox, C; Sampietro, ML; Gilbert, MTP; Castri, L; Facchini, F; Pettener, D; Bertranpetit, J. "Unravelling migrations
in the steppe: mitochondrial DNA sequences from ancient Central Asians". Proceedings of the Royal Society B-Biological
Sciences 271 1542 (2004): 941-947. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000221199600008&KeyUID=WOS:000221199600008.
10.1098/rspb.2004.2698
- Prentice, M; Gilbert, T; Cooper, A. "Was the Black Death caused by Yersinia pestis?". Lancet Infectious Diseases 4
2 (2004): 72-72. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000188766100015&KeyUID=WOS:000188766100015.
10.1016/S1473-3099(04)00923-5
- M Thomas P Gilbert; J Cuccui; W White; Niels Lynnerup; RW Titball; A. Cooper; MB Prentice. "Abscence of Yersinia pestis-specific
dna in human teeth from five European excavations of putative plague victims". Microbiology 150 2 (2004): 341-354.
https://curis.ku.dk/portal/en/publications/abscence-of-yersinia-pestisspecific-dna-in-human-teeth-from-five-european-excavations-of-putative-plague-victims(ca346e00-74c3-11db-bee9-02004c4f4f50).html.
- Drancourt, M.; Raoult, D.; Gilbert, M.T.P.; Cuccui, J.; White, W.; Lynnerup, N.; Titball, R.W.; Cooper, A.; Prentice, M.B..
"Molecular detection of Yersinia pestis in dental pulp". Microbiology 150 2 (2004): 263-265. http://www.scopus.com/inward/record.url?eid=2-s2.0-1242296239&partnerID=MN8TOARS.
- Gilbert, MTP; Cuccui, J; White, W; Lynnerup, N; Titball, RW; Cooper, A; Prentice, MB. "Absence of Yersinia pestis-specific
DNA in human teeth from five European excavations of putative plague victims". Microbiology-Sgm 150 (2004): 341-354.
http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000188841500012&KeyUID=WOS:000188841500012.
10.1099/mic.0.26594-0
- Gilbert, MTP; Wilson, AS; Bunce, M; Hansen, AJ; Willerslev, E; Shapiro, B; Higham, TFG; et al. "Ancient mitochondrial DNA
from hair". Current Biology 14 12 (2004): R463-R464. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000222305500007&KeyUID=WOS:000222305500007.
10.1016/j.cub.2004.06.008
- Gilbert, MTP; Hansen, AJ; Willerslev, E; Rudbeck, L; Barnes, I; Lynnerup, N; Cooper, A. "Characterization of genetic miscoding
lesions caused by postmortem damage". American Journal of Human Genetics 72 1 (2003): 48-61. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000180186800005&KeyUID=WOS:000180186800005.
10.1086/345379
- Gilbert, MTP; Willerslev, E; Hansen, AJ; Barnes, I; Rudbeck, L; Lynnerup, N; Cooper, A. "Distribution patterns of postmortem
damage in human mitochondrial DNA". American Journal of Human Genetics 72 1 (2003): 32-47. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000180186800004&KeyUID=WOS:000180186800004.
10.1086/345378
- Willerslev, E; Hansen, AJ; Binladen, J; Brand, TB; Gilbert, MTP; Shapiro, B; Bunce, M; et al. "Diverse plant and animal genetic
records from Holocene and Pleistocene sediments". Science 300 5620 (2003): 791-795. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000182579800049&KeyUID=WOS:000182579800049.
10.1126/science.1084114
- Jaenicke-Despres, V; Buckler, ES; Smith, BD; Gilbert, MTP; Cooper, A; Doebley, J; Paabo, S. "Early allelic selection in maize
as revealed by ancient DNA". Science 302 5648 (2003): 1206-1208. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000186544300053&KeyUID=WOS:000186544300053.
10.1126/science.1089056
- Lalueza-Fox, C; Gilbert, MTP; Martinez-Fuentes, AJ; Calafell, F; Bertranpetit, J. "Mitochondrial DNA from pre-Columbian Ciboneys
from Cuba and the prehistoric colonization of the Caribbean". American Journal of Physical Anthropology 121 2 (2003):
97-108. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000183084700001&KeyUID=WOS:000183084700001.
10.1002/ajpa.10236
- Endicott, P; Gilbert, MTP; Stringer, C; Lalueza-Fox, C; Willerslev, E; Hansen, AJ; Cooper, A. "The genetic origins of the
Andaman Islanders". American Journal of Human Genetics 72 1 (2003): 178-184. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000180186800018&KeyUID=WOS:000180186800018.
10.1086/345487
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