Jean-Baptiste Ledoux (0812-1710-4666)

Curriculum Vitae

Jean-Baptiste Ledoux

I am FCT-Auxiliary Researcher at CIIMAR (https://www2.ciimar.up.pt; Portugal) and I collaborate with the MEDRECOVER team (http://www.medrecover.org; Spain). I work in the areas of Natural and Biological Sciences with emphasis on Biodiversity Conservation and Marine Biology. Integrating population genetics, genomics, field monitoring and experimental ecology, I study the molecular ecology and evolution of temperate habitat-forming corals (Mediterranean and Atlantic). My ultimate goal is to understand the forces underlying the intraspecific diversity in these species to promote their conservation and, thereby, the conservation of associated biodiversity-rich communities. I address two main questions: i) What are the processes shaping and maintaining the patterns of neutral and selected genetic diversity? ii) How genetic factors and eco-evolutionary processes are driving the response of individuals and populations to anthropogenic climate change? I translate obtained results in management recommendations which can be used to improve conservation efforts (e.g. protected areas). In parallel, I am involved in long term biodiversity surveys focused on Mediterranean marine animal forest dominated by gorgonians. I am also taking part in literature surveys reviewing for instance the impact of climate change on Mediterranean biodiversity or the macro genetic pattern in marine habitat forming species. I defended my PhD at the Aix-Marseille University (France) in 2010 during which I pioneered the molecular ecology of Mediterranean octocorals. I did different postdoctoral contracts between Spain (Institut of Marine Sciences, ICM-CSIC) and Portugal (Interdisciplinary Centre of Marine and Environmental Research; CIIMAR) between 2011 and 2018, with two contracts from projects (between 2011-2012 and 2017-2018 at the ICM) and one postdoc fellowship (FCT postdoc fellowship between 2012-2017 at CIIMAR; SFRH/BPD/74400/2010). Strengthening the interdisciplinarity of my research, I pioneered the genomics in octocorals. I supervised or co-supervised > 20 students (under-graduated, master and including 3 PhD student, 1 on-going) from different universities (Aix-Marseille University and Sorbonne University Campus Pierre & Marie Curie in France; Zagreb University in Croatia; Barcelona University in Spain, Universidad de Magallanes in Chile). I was involved in the committee of 3 PhD students (Spain, Tunisia and Chile). I was involved in different academic courses in French (Aix-Marseille University), Spanish (Universitat de Barcelona) and Portuguese (Universidad do Porto) universities. I also taught during a summer school dedicated to the marine restoration of rocky Mediterranean communities organized in the framework of the H2020 MERCES project in 2019. I took part in >20 national or international projects, in which, I was in charge of the population genetics/genomics part from grant writing to publications (MERCES; SMART; MedDIVERSA; BIOROCK). I coordinate(d) or co-coordinate(d) 5 international projects (PERFECT, MIMOSA, CoGeCo, RedCor-Biogenoma, DeepEvo) and I am currently involved in 3 of them (FUTUREMARES, BLUEFORESTING, COAST). I reviewed > 50 papers for > 15 journals. I was involved in the panel of experts for the Israel Science Foundation (2012), for the French Institute for Sea Exploitation (IFREMER; 2020, 2023) and for the Hellenic Foundation for Research and Innovation (2021). I have > 50 congress contributions and 5 invited seminars. I organized a workshop during the ImarCo Congress (2019). I published >50 papers (17 as first or last author), and 4 book chapters (1 as first Author). My H-index is 30 (I-10= 40). The most frequent terms in my curriculum Ciência Vitae in the context of scientific, technological and artistic-cultural outputs are: Marine biodiversity; Global change; Eco-evolutionary dynamics; Population genetics; Field ecology; Experimental ecology; Genomics; Field monitoring; Marine Protected Areas.

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Identification

Personal identification

Full name: Jean-Baptiste Ledoux

Citation names

Ledoux, Jean-Baptiste

Author identifiers

Ciência ID: 0812-1710-4666
ORCID iD: 0000-0001-8796-6163

Websites

https://www2.ciimar.up.pt/team.php?id=166 (Professional)
https://scholar.google.com/citations?user=vOx7VwIAAAAJ&hl=fr (Scholar)

Knowledge fields

Natural sciences - Biological Sciences - Biodiversity Conservation

Languages

Language	Speaking	Reading	Writing	Listening	Peer-review
French (Mother tongue)
English	Proficiency (C2)	Proficiency (C2)	Proficiency (C2)	Proficiency (C2)	Proficiency (C2)
Spanish; Castilian	Proficiency (C2)	Proficiency (C2)	Proficiency (C2)	Proficiency (C2)	Proficiency (C2)
Portuguese	Upper intermediate (B2)	Upper intermediate (B2)	Upper intermediate (B2)	Upper intermediate (B2)	Upper intermediate (B2)

Education

	Degree	Classification
2010 Concluded	Docteur de l'université d'Aix-Marseille, spécialité: Biosciences de l'environnement, chimie et santé (Doutoramento) Aix-Marseille Université, France "Conservation biology of the red coral (Corallium rubrum L. 1758): impact of global changes on the evolution of the shallow populations in the North Western Mediterranean Sea" (THESIS/DISSERTATION)	PhD
2004 Concluded	DEA Biologie, évolution et contröle des populations (Bachelor) Université de Tours, France "Consequences of the protected development on genetic structure at different spatial scales of the subantarctic brooding sea-urchin Abatus cordatus (Verill, 1876), endemic of Kerguelen Island " (THESIS/DISSERTATION)	Master
2003 Concluded	Maîtrise de biologie des populations (Bachelor) Université de Poitiers, France "Influence of micro phytoplankton (Diatomes) on the recruitment of Calanus helgolandicus (Copepoda) " (THESIS/DISSERTATION)	Master
2002 Concluded	Licence de biologie des organismes (Licence) Université de Poitiers, France "N/A" (THESIS/DISSERTATION)	Licence
2001 Concluded	Diplome d'Etudes Universitaires Générales de biologie (Postgraduate Certificate) Université de Poitiers, France "N/A" (THESIS/DISSERTATION)	DEUG

Affiliation

Science

	Category Host institution	Employer
2022/05/01 - 2027/04/30	Auxiliary Researcher (Research)	Associação para a Inovação e Desenvolvimento da FCT, Portugal
	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2018/06/25 - 2024/06/24	Contracted Researcher (Research)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

2017/03/01 - 2018/05/01	Postdoc (Research)	Institut de Ciències del Mar, Spain

2012/03/01 - 2017/02/28	Postdoc (Research)	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

2011/02/01 - 2012/01/31	Postdoc (Research)	Institut de Ciències del Mar, Spain

Others

	Category Host institution	Employer
2004/09 - 2010/10/26	PhD Student	Aix-Marseille Université, France

2003/10 - 2004/06	DEA Student	Université de Tours, France

1999/10 - 2003/06	Student in Biology (DEUG, Licence, Maîtrise)	Université de Poitiers, France

Projects

Grant

	Designation	Funders
2020/10/01 - Current	DEEP-HEART: Niche environnementale, connectivité et biodiversité de populations de gorgonaires au sein de l'écosystème coralligène en Méditerranée française (20 - 100 m) : état initial, mise en place d¿un suivi à long terme et développement d'un réseau en sciences participatives LABEX CEMEB Researcher Centre pour la Biodiversité Marine l'Exploitation et la Conservation, France Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal Institut de Ciències del Mar, Spain Institut Méditerranéen d¿Océanologie, France	Centre Mediterranean Environnement et Biodiversité Ongoing
2022/04 - 2025/03	COAST COnservation of mArine ecosystems around Santo AnTão, Cabo Verde: implications for policy and society GA N°101003777 Invited Scientist Fellow Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	European Biodiversity Partnership Ongoing
2022/01/01 - 2024/12/01	BLUEFORESTING - Climate Resilient Marine Forests for a Sustainable Future PT-INNOVATION-0077 Researcher Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal Norsk Institutt for Vannforskning, Norway Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal Instituto Politécnico de Leiria, Portugal	EEA Grants Ongoing
2020 - 2023	FUTUREMARES - CLIMATE CHANGE AND FUTURE MARINE ECOSYSTEM SERVICES AND BIODIVERSITY SEP-210597628 Researcher Universität Hamburg, Germany	EU Framework Programme for Research and Innovation Euratom Ongoing
2020/09/01 - 2022/12/31	DEEPEVO - Du gène à la protéine : adaptation et acclimatation du gorgonaire Eunicella cavolini au sein de l’écosystème coralligène de Méditerranée KIM Sea & Cost MUSE Principal investigator Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal Institut Méditerranéen d¿Océanologie, France (UMR) MARBEC, MARine Biodiversity, Exploitation and Conservation, France	Centre Mediterranean Environnement et Biodiversité Ongoing
2020/10/01 - 2022/09/30	CoGeCo - Comparative genomics at population and species levels in warming threatened temperate corals. PID-10240 Principal investigator Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	EU Framework Programme for Research and Innovation Research Infrastructures and E-Infrastructures Ongoing
2021/01/01 - 2021/12/31	De novo genome sequencing of the red coral, Corallium rubrum (Linnaeus, 1758): providing genomic resources to improve the conservation and restoration of an emblematic Mediterranean octocoral. XXX Principal investigator Institut de Ciències del Mar, Spain Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Societat Catalana de Biologia Ongoing
2016 - 2020	Phylogeography, population genetic structure and connectivity of the Subantarctic crab Halicarcinus planatus, the first alien marine invertebrate discovered in Antarctica Fondecyt Regular 1161358 Researcher Universidad de Magallanes Centro de Investigación GAIA Antártica, Chile	Comisión Nacional de Investigación Científica y Tecnológica Fondo Nacional de Desarrollo Científico y Tecnológico Ongoing
2017 - 2019	MERCES. Restoration of marine ecosystems in European Sea 689518 Researcher Università Politecnica delle Marche, Italy	Horizon 2020 Ongoing
2016 - 2018	MIMOSA: Are Mediterranean marine protected areas efficient against warming effects? MEDRECOVER_12 Research Fellow Consejo Superior de Investigaciones Científicas, Spain	Fondation Prince Albert II Monaco Concluded
2015 - 2017	PERFECT: Photogrammetry, gEnetics, Ecology for red coral ConservaTion xx Researcher Centre National de la Recherche Scientifique, France Consejo Superior de Investigaciones Científicas, Spain	Total Foundation Concluded
2012 - 2017	EVOLUTION OF MARINE BIODIVERSITY: LINKING NATURAL GENETIC VARIATION WITH PHENOTYPIC DIVERSITY IN THE SEA SFRH/BPD/74400/2010 Post-doc Fellow Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Fundação para a Ciência e a Tecnologia Concluded
2013 - 2015	SMART - Resiliencia de las especies marinas longevas y estructurales frente al cambio global: medidas de gestión y restauración sostenibles CGL2012-32194 Research Fellow Universitat de Barcelona Departament de Biologia Animal, Spain	Ministerio de Economia y Competitividad Concluded
2011 - 2013	CLIMCARES: Assessing climate change impacts on marine biodiversity conservation: The case study of mass mortality events in the NW Mediterranean basin xx Post-doc Consejo Superior de Investigaciones Científicas, Spain	Total Foundation Concluded
2010 - 2013	medDIVERSA: Global change in highly-diverse Mediterranean coralligenous communities: Consequences for biodiversity conservation xx Post-doc Fellow Consejo Superior de Investigaciones Científicas, Spain	Total Foundation Concluded
2010 - 2013	BIOROCK - Global change on sublittoral rocky-bottoms: consequences for biodiversity conservation CTM2009–08045 Research Fellow Institut de Ciències del Mar, Spain	Gobierno de España Ministerio de Ciencia Innovación y Universidades Concluded
2006 - 2008	MEDCHANGE. Evolution and conservation of marine biodiversity facing global change: the case of Mediterranean communities dominated by long-lived species ANR-05-BDIV-0005 PhD Student Fellow	Agence nationale de la recherche Concluded

Contract

	Designation	Funders
2018/07/26 - 2022/07/25	Sexo e o meio ambiente: Descodificação genómica e a perpetuação da vida animal num mundo em mudança PTDC/CTA-AMB/31774/2017	Fundação para a Ciência e a Tecnologia Ongoing
2010 - 2022	MEDRECOVER. Recognised as a Consolidated Research Group by the Government of Catalonia: marine conservation biology in marine ecosystems xxxx Post-doc Consejo Superior de Investigaciones Científicas, Spain Generalitat de Catalunya Agència de Gestió d'Ajuts Universitaris i de Recerca, Spain	Generalitat de Catalunya Agència de Gestió d'Ajuts Universitaris i de Recerca Ongoing
2016/06/01 - 2020/05/31	Animal sensory diversity: innovative genomic solutions to enhance perception of environmental stimuli PTDC/AAG-GLO/6887/2014	Fundação para a Ciência e a Tecnologia Ongoing
2006 - 2017	Conservation status and characterization of red coral populations (Corallium rubrum) of the Natural Reserve of Scandola xxxx Other Centre National de la Recherche Scientifique, France Consejo Superior de Investigaciones Científicas, Spain	Concluded

Outputs

Publications

Book	Costantini, F.; Aurelle, D.; Ledoux, J.-B.; Abbiati, M.. Population genetic structure of Corallium rubrum in the Mediterranean sea: Diversity, phylogeography, and bathymetric patterns. 2016. Ledoux, J.-B.; Antunes, A.; Haguenauer, A.; Pratlong, M.; Costantini, F.; Abbiati, M.; Aurelle, D.. Molecular forensics into the sea: How molecular markers can help to struggle against poaching and illegal trade in precious corals?. 2016.
Book chapter	Matos, A.; Ledoux, Jean-Baptiste; Dominguez-Perez, D.; Almeida, D.; Antunes, A.. "Omics advance in the study of zooplankton: big data for small drifting organisms". In Zooplankton Ecology, edited by Teodosio, A.; Barbosa, A.B.. CRC press, Taylor and Francis Group, 2020. Published Garrabou, J.; Ledoux, J.B.; Bensoussan, N.; Gomez-Gras, D.; Linares, C.. "Sliding down towards the collapse of Mediterranean coastal marine rocky ecosystems". In Ecosystem collapse and Climate change, edited by Rob Jackson; Pep Canadell. Springer Nature, 2020. Published Ledoux, Jean-Baptiste; Antunes, Agostinho; Haguenauer, Anne; Pratlong, Marine; Costantini, Federica; Abbiati, Marco; Aurelle, Didier. "Molecular Forensics into the Sea: How Molecular Markers Can Help to Struggle Against Poaching and Illegal Trade in Precious Corals?". In The Cnidaria, Past, Present and Future, 729-745. Springer International Publishing, 2016. 10.1007/978-3-319-31305-4_45 Costantini, Federica; Aurelle, Didier; Ledoux, Jean-Baptiste; Abbiati, Marco. "Population Genetic Structure of Corallium rubrum in the Mediterranean Sea: Diversity, Phylogeography, and Bathymetric Patterns". In The Cnidaria, Past, Present and Future, 717-728. Springer International Publishing, 2016. 10.1007/978-3-319-31305-4_44
Conference paper	Ghanem, R.; Soufi-Kechaou, E.; Bensoussi, J.; Linares, C.; Ledoux, J.B.. "Demography and disturbance levels of the coral Astroides calycularis (Pallas, 1766) in the Tunisian Marine Protected Area of Zembra (Central Mediterranean)". Paper presented in 3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions, Antalya, 2019. Published Guarnieri, G.; Mcowen, C.; Papa, L.; Papadopoulou, N.; Bilan, M.; Bostrom, C.; Capdevila, P.; et al. "Active restoration across marine coastal habitats: a focus on the Mediterranean Sea.". Paper presented in 3nd Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions, Antalya, 2019. Published Kipson, S.; Cerrano, C.; Linares, C.; Bakran-Petricioli, T.; Ferretti, E.; Gomez-Gras, D.; Ledoux, J.B.; et al. "Can facilitation processes enhance the effectiveness of restoration actions in the coralligenous habitats ?". Paper presented in 3nd Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions, Antalya, 2019. Published Ledoux, J.B.; Gomez-Gras, D.; Cruz, F.; Alioto, T.S.; Bakran-Petriciolo, T.; Boavida, J.; delCampo, J.; et al. "Enhancing the effectiveness of restoration actions in coralligenous habitats: Insights from a transregional thermotolerance experiment.". Paper presented in 3nd Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions, Antalya, 2019. Published Linares, C.; Montero-Serra, I.; Aspillaga, E.; Cabrito, A.; Capdevila, P.; Ledoux, J.B.; Lopez, A.; et al. "Advances in the conservation of red coral populations: Long-term demographic data, management tools and restoration activities.". Paper presented in 3nd Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions, Tunis, 2019. Cerrano, C.; Bakran-Petricioli, T.; Caroni, J.; Ferretti, E.; Gari, A.; Gomez-Gras, D.; Gori, A.; et al. "Restoration protocols for the Mediterranean coralligenous habitats". Paper presented in the 3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions, Antalya, 2019. Published Laura Figuerola Ferrando; Ignasi Montero Serra; Cristina Linares; Daniel Gomez-Gras; Ledoux, Jean-Baptiste; Bernat Hereu; Joaquim Garrabou. "Assessing the effectiveness of transplantation actions for the restoration of key Mediterranean gorgonians in the Catalan Sea.". Paper presented in 1th Annual Meeting MERCES, Heraklion, 2017. Drap, P.; Royer, J.P.; Nawaf, M.M.; Saccone, M.; Merad, D.; López-Sanz, A.; Ledoux, J.B.; Garrabou, J.. "Underwater photogrammetry, coded target and plenoptic technology: A Set of tools for monitoring red coral in mediterranean sea in the framework of the "perfect" project". 2017. 10.5194/isprs-archives-XLII-2-W3-275-2017 Linares, C.; Arizmendi-Meija, R.; Ballesteros, E.; Cebrian, E.; Coma, R.; Diaz, D.; Hereu, B.; et al. "Response of coralligenous to global change: Evidences from field and experiment studies in gorgonian forests.". Paper presented in 2nd Symposium on the conservation of coralligenous and other calcareous bio-concretions, Portoroz, 2014. Published Ledoux, Jean-Baptiste; Aurelle, D.; Arizmendi-Meija, R.; Frleta-Valic, M; Linares, C.; Mokhtar-Jamaï, K.; Pratlong, M.; Antunes, A.; Garrabou, J.. "Population genetics studies over contrasted spatial scales of two structural gorgonian species from the coralligenous: state-of-the-art and conservation implications.". Paper presented in 2nd Symposium on the conservation of coralligenous and other calcareous bio-concretions, Portoroz, 2014. Published Frleta-Valic, M.; Kipson, S.; Linares, C.; Cebrian, E.; Antunes, A.; Garrabou, J.. "Population genetics of Paramuricea clavata (Risso, 1826) in the eastern Adriatic Sea: Implications for its conservation and management.". Paper presented in 2nd Symposium on the conservation of coralligenous and other calcareous bio-concretions, Portoroz, 2014. Published Montero-Serra, I; Linares, C.; Garcia, M.; Pancaldi, F.; Frleta-Valic, M.; Ledoux, J.B.; Zuberer, F.; et al. "Long-term demographic traits of red coral populations in the NW Mediterranean: Insights into management strategies". Paper presented in 2nd Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions, Portoroz, 2014. Published Ledoux, Jean-Baptiste; Mokhtar- Jamaï, K.; Chenuil, A.; Féral, J.-P.; Garrabou, J.; Aurelle, D.. "Genetic subdivisions of the red coral (Corallium rubrum) in the western Mediterranean Sea: Evolutionary history and management implications.". Paper presented in CIESM Congress, Venise, 2010. Published Ledoux, Jean-Baptiste; Aurelle, D.; Féral, J.-P.; Garrabou, J.; Marschal, C.. "Experimental approach to the potential response of a long-lived invertebrate species facing the warming in the NW Mediterranean.". Paper presented in 39th CIESM Congress, Venice, 2010. Published • 10.1130/abs/2018am-315896 Garrabou, J.; Aurelle, D.; Bally, M.; Linares, C.; Ledoux, J.B.; Bianchimani, O.; Mokhtar-Jamaï, K.; et al. "Evolution and conservation of marine biodiversity facing global change : the case of Mediterranean communities dominated by long-lived species". Paper presented in 1st symposium on mediterranean coralligenous, Tabarka, 2009. Published Mokhtar-Jamaï, K.; Ledoux, Jean-Baptiste; Garrabou, J.; Féral, J.-P.; Aurelle, D.. "Interest and application of genetic markers for the study and conservation of Mediterranean sessile invertebrates.". Paper presented in 1st Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions, Tabarka, 2009. Published Boury-Esnault, N.; Perez, T.; Romano, J.C.; Garrabou, J.; Chevaldonné, P.; Lejeusne, C.; Bensoussan, N.; et al. "Évaluation des modifications de la biodiversité marine sous l’influence du changement global en Méditerranée nord-occidentale.". Paper presented in Réponses adaptatives au changement global : résultats et prospective, Paris, 2006. Published
Conference poster	Despujols, Daniel; Figueiredo, Pedro; Soares, Ana Sofia; Gregório, I.S.; Mejía-Saenz, Alejandra; Domingos, Celso; Ledoux, Jean-Baptiste; Carreiro-Silva, Marina; Xavier, Joana R.. Corresponding author: Despujols, Daniel. "New records of cold-water corals collected as bycatch from the northern continental shelf of Portugal: a DNA barcoding approach". Paper presented in 8th International Symposium of Deep Sea Corals, 2023. Aurelle, D.; Pratlong, M.; Haguenauer, A.; Pontarotti, P.; Bensoussan, N.; Garrabou, J.; Toulza, E.; Mitta, G.; Ledoux, J.B.. "Bridging the gap between evolutionary and conservation biology : the case of a precious octocoral threatened by global change, the Mediterranean red coral.". Paper presented in Evolution, 2018. Montero-Serra, I; Linares, C.; Doak, D.F.; Ledoux, Jean-Baptiste; Drap, P.; Garrabou, J.. "Differential impacts of warming and marine protected areas on the resilience and structural complexity of the Mediterranean red coral". Paper presented in European Coral Reefs Symposium, 2017. Ledoux, Jean-Baptiste; Gomez-Gras, D.; Linares, C.; Montero-Serra, I; López-Sendino, P.; Kipson, S.; Bakran-Petricioli, T.; et al. "Transregional thermotolerance experiment: relative role of neutral vs. selected processes in the differential responses of Paramuricea clavata to thermal stress.". Paper presented in 1th MERCES Annual Meeting, 2017. Cahill, A.E.; Aurelle, D.; Boisson, E.; Dejode, A.; Egea, E.; Erga, Z.; David, R.; et al. "Determinants of connectivity in the marine environment: a multispecies approach.". Paper presented in Annual meeting of the Society for integrative and comparative biology (SICB), 2016. Cahill, A.E.; Aurelle, D.; Boisson, E.; Dejode, A.; Egea, E.; Erga, Z.; David, R.; et al. "Determinants of connectivity in the marine environment: a multispecies approach.". Paper presented in XVth European Society for Evolutionary Biology (ESEB), 2015. Arizmendi-Mejia, R.; Ledoux, Jean-Baptiste; Civit, S.; Antunes, A.; Thanopoulou, Z.; Garrabou, J.; Linares, C.. "Responses of habitat-forming species to warming: vulnerability of a Mediterranean anthozoa during reproduction". Paper presented in 2nd International Ocean Research Conference (IORC), 2014. Aurelle, D.; Pratlong, M.; Mokhtar- Jamaï, K.; Ledoux, Jean-Baptiste. "Can we estimate marine connectivity with genetic approaches? A case study on North Western populations of two Mediterranean gorgonians.". Paper presented in 40th CIESM congress, 2013. Aurelle, D.; Pratlong, M.; Mokhtar- Jamaï, K.; Ledoux, Jean-Baptiste. "Connectivity in fragmented marine environments: a comparative approach between two low dispersal species". Paper presented in XIV congress of the European Society for Evolutionary Biology, 2013. Ledoux, Jean-Baptiste; Mokhtar- Jamaï, K.; Chenuil, A.; Féral, J.- P.; Garrabou, J.; Aurelle, D.. "Genetic subdivisions of the red coral (Corallium rubrum) in the western Mediterranean Sea: Evolutionary history and management implications". Paper presented in CIESM Congress, 2010. Garrabou, J.; Aurelle, D.; Bally, M.; Linares, C.; Ledoux, J.B.; Bianchimani, O.; Mokhtar- Jamaï, K.; et al. "MEDCHANGE: an interdisciplinary project to promote Mediterranean marine biodiversity conservation face to global change". Paper presented in ASLO Aquatic Science Meeting, 2009. Garrabou, J.; Bally, M.; Linares, C.; Ledoux, Jean-Baptiste; Bianchimani, O.; Mokhtar-Jamaï, K.; Cebrian, E.; et al. "Evolution and conservation of marine biodiversity facing global change : the case of Mediterranean communities dominated by long-lived species.". Paper presented in 1st symposium on mediterranean coralligenous, 2009. Boury-Esnault, N.; Perez, T.; Romano, J.C.; Garrabou, J.; Chevaldonné, P.; Lejeusne, C.; Bensoussan, N.; et al. "Evaluation des modifications de la biodiversité marine sous l’influence du changement global en Méditerranée nord-occidentale.". Paper presented in Colloque de restitution IFB – GICC, Réponses adaptatives au changement global : résultats et prospective, 2006. Ledoux, Jean-Baptiste; Aurelle, D.; Garrabou, J.; Marschal, C.; Féral, J.-P.. "Experimental approach to the potential response of a long-lived invertebrate species facing the climate change: the case of the Mediterranean red coral Corallium rubrum (L.)". Paper presented in 41st European Marine Biology Symposium, 2006. Ledoux, Jean-Baptiste; Garrabou, J.; Aurelle, D.; Bally, M.; Bensoussan, N.; Bianchimani, O.; Drap, P.; et al. "Conservation and management needs for populations of long-lived temperate coral under the effects of harvesting and climate change". Paper presented in Society for Conservation Biology, 20th Annual meeting, 2006. Ledoux, Jean-Baptiste; Aurelle, D.; Garrabou, J.; Marschal, C.; Féral, J.-P.. "Evolutionnary conservation biology: the case of Corallium rubrum in the North-Western Meditteranean Sea". Paper presented in Annual congress of PhD students in Environmental Sciences at the University of Aix-Marseille, 2005.
Journal article	Bonacolta, Anthony M.; Miravall, Jordi; Gómez-Gras, Daniel; Ledoux, Jean-Baptiste; López-Sendino, Paula; Garrabou, Joaquim; Massana, Ramon; del Campo, Javier. "Differential apicomplexan presence predicts thermal stress mortality in the Mediterranean coral Paramuricea clavata". Environmental Microbiology 26 1 (2023): http://dx.doi.org/10.1111/1462-2920.16548. 10.1111/1462-2920.16548 Horaud, Mathilde; Arizmendi-Meija, Rosana; Nebot-Colomer, Elisabet; López-Sendino, Paula; Antunes, Agostinho; Dellicour, Simon; Viard, Frédérique; et al. "Comparative population genetics of habitat-forming octocorals in two marine protected areas: eco-evolutionary and management implications". Conservation Genetics (2023): http://dx.doi.org/10.1007/s10592-023-01573-8. Published • 10.1007/s10592-023-01573-8 Laura Figuerola-Ferrando; Aldo Barreiro; Ignasi Montero-Serra; Marta Pagès-Escolà; Joaquim Garrabou; Cristina Linares; Jean-Baptiste Ledoux. "Global patterns and drivers of genetic diversity among marine habitat-forming species". Global Ecology and Biogeography (2023): https://doi.org/10.1111/geb.13685. 10.1111/geb.13685 Coelho, Márcio A. G.; Pearson, Gareth A.; Boavida, Joana R. H.; Paulo, Diogo; Aurelle, Didier; Arnaud-Haond, Sophie; Gómez-Gras, Daniel; et al. "Not out of the Mediterranean: Atlantic populations of the gorgonian Paramuricea clavata are a separate sister species under further lineage diversification". Ecology and Evolution 13 1 (2023): http://dx.doi.org/10.1002/ece3.9740. 10.1002/ece3.9740 Coelho, Márcio A. G.; Ledoux, Jean-Baptiste; Boavida, Joana; Paulo, Diogo; Gómez-Gras, Daniel; Bensoussan, Nathaniel; López-Sendino, Paula; et al. "Complete mitochondrial genome of the branching octocoral Paramuricea grayi (Johnson, 1861), phylogenetic relationships and divergence analysis". Mitochondrial DNA Part B 7 11 (2022): 1985-1988. http://dx.doi.org/10.1080/23802359.2022.2143246. 10.1080/23802359.2022.2143246 Garrabou, Joaquim; Gómez-Gras, Daniel; Medrano, Alba; Cerrano, Carlo; Ponti, Massimo; Schlegel, Robert; Bensoussan, Nathaniel; et al. "Marine heatwaves drive recurrent mass mortalities in the Mediterranean Sea". Global Change Biology 28 19 (2022): 5708-5725. http://dx.doi.org/10.1111/gcb.16301. 10.1111/gcb.16301 D. Gómez-Gras; C. Linares; A. López-Sanz; R. Amate; J. B. Ledoux; N. Bensoussan; P. Drap; et al. "Population collapse of habitat-forming species in the Mediterranean: a long-term study of gorgonian populations affected by recurrent marine heatwaves". Proceedings of the Royal Society B: Biological Sciences (2021): https://doi.org/10.1098/rspb.2021.2384. 10.1098/rspb.2021.2384 Jean-Baptiste Ledoux; Raouia Ghanem; Mathilde Horaud; Paula López-Sendino; Valèria Romero-Soriano; Agostinho Antunes; Nathaniel Bensoussan; et al. "Gradients of genetic diversity and differentiation across the distribution range of a Mediterranean coral: Patterns, processes and conservation implications". Diversity and Distributions (2021): https://doi.org/10.1111/ddi.13382. 10.1111/ddi.13382 Stankiewicz, Kathryn H.; Vasquez Kuntz, Kate L.; Ledoux, Jean-Baptiste; AURELLE, Didier; Garrabou, Joaquim; Yuichi Nakajim; Mikael Dahl; et al. "The impact of estimator choice: Disagreement in clustering solutions across K estimators for Bayesian analysis of population genetic structure across a wide range of empirical data sets". Molecular Ecology Resources (2021): http://dx.doi.org/10.1111/1755-0998.13522. 10.1111/1755-0998.13522 Daniel Gómez-Gras; Cristina Linares; Maria Dornelas; Joshua S. Madin; Viviana Brambilla; Jean-Baptiste Ledoux; Paula López-Sendino; et al. "Climate change transforms the functional identity of Mediterranean coralligenous assemblages". Ecology Letters 24 5 (2021): 1038-1051. https://doi.org/10.1111/ele.13718. 10.1111/ele.13718 RAOUIA GHANEM; JAMILA BEN SOUISSI; JEAN-BAPTISTE LEDOUX; CRISTINA LINARES; JOAQUIM GARRABOU. "Population structure and conservation status of the white gorgonian Eunicella singularis (Esper, 1791) in Tunisian waters (Central Mediterranean)". Mediterranean Marine Science (2021): https://doi.org/10.12681/mms.24984. 10.12681/mms.24984 Fraschetti, S.; Mcowen, C.; Papa, L.; Papadopoulou, N.; Bilan, M.; Bostrom, C.; Capdevila, P.; et al. "Where is more important than how: determinants of restoration success in coastal and marine ecosystems". Frontiers in Marine Sciences (2021): Accepted Carlota R Gazulla; Paula López-Sendino; Dr. Agostinho Antunes; Dr. Didier Aurelle; Dr. Ignasi Montero-Serra; Jean-Marie Dominici; Dr. Cristina Linares; Dr. Joaquim Garrabou; Ledoux, Jean-Baptiste. "Demo-genetic approach for the conservation of an habitat-forming octocoral: the case of the red coral, Corallium rubrum, in the Réserve Naturelle de Scandola.". Frontiers in Marine Science section Marine Ecosystem Ecology (2021): Under revision Ledoux, Jean-Baptiste; Dr. Paolo Rossi; Dr. Massimo Ponti; Dr. Sara Righi; Dr. Cristina Castagnetti; Dr. Roberto Simonini; Dr. Francesco Mancini; et al. "Needs and gaps in optical underwater technologies and methods for the investigation of marine animal forest 3D-structural complexity". Frontiers in Marine Science (2021): Open access • In press Daniel Gómez-Gras; Dr. Cristina Linares; Lopez-Sanz, Angel; Ledoux, Jean-Baptiste; Amate Rita; Dr. Bensoussan Nathaniel; Dr. Pierre Drap; et al. "Population collapse of habitat-forming species in the Mediterranean: a long-term study of gorgonian populations affected by recurrent marine heatwaves". Proceedings of the Royal Society B (2021): Under revision Jean-Baptiste Ledoux; Fernando Cruz; Jèssica Gómez-Garrido; Regina Antoni; Julie Blanc; Daniel Gómez-Gras; Silvija Kipson; et al. "The Genome Sequence of the Octocoral Paramuricea clavata – A Key Resource To Study the Impact of Climate Change in the Mediterranean". G3: Genes\|Genomes\|Genetics 10 9 (2020): 2941-2952. https://doi.org/10.1534/g3.120.401371. 10.1534/g3.120.401371 Ledoux, Jean-Baptiste; Frias-Vidal, Silvia; Montero-Serra, Ignasi; Antunes, Agostinho; Casado Bueno, Clara; Civit, Sergi; Lopez-Sendino, Paula; Linares, Cristina; Garrabou, Joaquim. "Assessing the impact of population decline on mating system in the overexploited Mediterranean red coral". Aquatic Conservation: Marine and Freshwater Ecosystems 30 6 (2020): 1149-1159. http://dx.doi.org/10.1002/aqc.3327. 10.1002/aqc.3327 Aurelle, D.; Tariel, J.; Zuberer, F.; Haguenauer, A.; Ribout, C.; Masmoudi, M.; Kara, H.; et al. "Genetic insights into recolonization processes of Mediterranean octocorals". Marine Biology 167 (2020): 73. https://doi.org/10.1007/s00227-020-03684-z. Published Garrabou, Joaquim; Gómez-Gras, Daniel; Ledoux, Jean-Baptiste; Linares, Cristina; Bensoussan, Nathaniel; López-Sendino, Paula; Bazairi, Hocein; et al. "Collaborative Database to Track Mass Mortality Events in the Mediterranean Sea". Frontiers in Marine Science 6 (2019): http://dx.doi.org/10.3389/fmars.2019.00707. 10.3389/fmars.2019.00707 AURELLE, DIDIER; PANTE, ERIC; LEDOUX, JEAN-BAPTISTE; SARTORETTO, STÉPHANE. "Advances on the phylogenetic placement of the enigmatic octocoral Dendrobrachia Brook 1889 ". Zootaxa 4674 1 (2019): 117-126. http://dx.doi.org/10.11646/zootaxa.4674.1.6. 10.11646/zootaxa.4674.1.6 Bensoussan, Nathaniel; Cebrian, Emma; Dominici, Jean-Marie; Kersting, D.K.; Kipson, S.; Kizilkaya, Z.; Ocaña, O.; et al. "Using CMEMS and the Mediterranean Marine Protected Areas sentinel network to track ocean warming effects in coastal areas". Journal of Operational Oceanography 12 sup1 (2019): S65-S72. http://dx.doi.org/10.1080/1755876x.2019.1633075. 10.1080/1755876x.2019.1633075 Ignasi Montero-Serra; Joaquim Garrabou; Daniel F. Doak; Jean-Baptiste Ledoux; Cristina Linares; Bret Elderd. "Marine protected areas enhance structural complexity but do not buffer the consequences of ocean warming for an overexploited precious coral". Journal of Applied Ecology 56 5 (2019): 1063-1074. https://doi.org/10.1111/1365-2664.13321. 10.1111/1365-2664.13321 Maria Grazia Paletta; Jordi Grinyó; Josep-Maria Gili; David Díaz; Anabel Muñoz; Joaquim Garrabou; Marco Abbiati; Jean-Baptiste Ledoux; Federica Costantini. "Exploring the genetic diversity and the population structure of the mesophotic Paramuricea macrospina in the Menorca Channel". Estuarine, Coastal and Shelf Science 219 (2019): 444-452. https://doi.org/10.1016/j.ecss.2019.02.024. 10.1016/j.ecss.2019.02.024 Rilov, Gil; Mazaris, Antonios D.; Stelzenmüller, Vanessa; Helmuth, Brian; Wahl, Martin; Guy-Haim, Tamar; Mieszkowska, Nova; Ledoux, Jean-Baptiste; Katsanevakis, Stelios. "Adaptive marine conservation planning in the face of climate change: What can we learn from physiological, ecological and genetic studies?". Global Ecology and Conservation 17 (2019): e00566. http://dx.doi.org/10.1016/j.gecco.2019.e00566. 10.1016/j.gecco.2019.e00566 von Schuckmann, K.; Le Traon, P.-Y.; Smith, N.; Pascual, A.; Djavidnia, S.; Gattuso, J.-P.; Grégoire, M.; et al. "Copernicus Marine Service Ocean State Report, Issue 3". Journal of Operational Oceanography 12 sup1 (2019): S1-S123. http://www.scopus.com/inward/record.url?eid=2-s2.0-85063545941&partnerID=MN8TOARS. 10.1080/1755876X.2019.1633075 Paletta, M.G.; Grinyó, J.; Gili, J.-M.; Díaz, D.; Muñoz, A.; Garrabou, J.; Abbiati, M.; Ledoux, J.-B.; Costantini, F.. "Corrigendum to “Exploring the genetic diversity and the population structure of the mesophotic Paramuricea macrospina in the Menorca channel” (Estuarine, Coastal and Shelf Science (2019) 219 (444–452), (S0272771418306413), (10.1016/j.ecss.2019.02.024))". Estuarine, Coastal and Shelf Science 228 (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85072240837&partnerID=MN8TOARS. 10.1016/j.ecss.2019.106311 Jean-Baptiste Ledoux; Maša Frleta-Valic; Silvija Kipson; Agostinho Antunes; Emma Cebrian; Cristina Linares; Pablo Sánchez; Raphael Leblois; Joaquim Garrabou. "Postglacial range expansion shaped the spatial genetic structure in a marine habitat-forming species: Implications for conservation plans in the Eastern Adriatic Sea". Journal of Biogeography (2018): https://doi.org/10.1111/jbi.13461. 10.1111/jbi.13461 Royer, Jean-Philip; Nawaf, Mohamad; Merad, Djamal; Saccone, Mauro; Bianchimani, Olivier; Garrabou, Joaquim; Ledoux, Jean-Baptiste; Lopez-Sanz, Angel; Drap, Pierre. "Photogrammetric Surveys and Geometric Processes to Analyse and Monitor Red Coral Colonies". Journal of Marine Science and Engineering 6 2 (2018): 42. http://dx.doi.org/10.3390/jmse6020042. 10.3390/jmse6020042 I. Montero-Serra; C. Linares; D. F. Doak; J. B. Ledoux; J. Garrabou. "Strong linkages between depth, longevity and demographic stability across marine sessile species". Proceedings of the Royal Society B: Biological Sciences 285 1873 (2018): 20172688-20172688. https://doi.org/10.1098/rspb.2017.2688. 10.1098/rspb.2017.2688 Cahill, Abigail E.; De Jode, Aurélien; Dubois, Sophie; Bouzaza, Zoheir; Aurelle, Didier; Boissin, Emilie; Chabrol, Olivier; et al. "A multispecies approach reveals hot spots and cold spots of diversity and connectivity in invertebrate species with contrasting dispersal modes". Molecular Ecology 26 23 (2017): 6563-6577. http://dx.doi.org/10.1111/mec.14389. 10.1111/mec.14389 Crisci, C.; Ledoux, J.-B.; Mokhtar- Jamaï, K.; Bally, M.; Bensoussan, N.; Aurelle, D.; Cebrian, E.; et al. "Regional and local environmental conditions do not shape the response to warming of a marine habitat-forming species". Scientific Reports 7 1 (2017): http://dx.doi.org/10.1038/s41598-017-05220-4. 10.1038/s41598-017-05220-4 Ledoux, Jean-Baptiste; Antunes, Agostinho. "Beyond the beaten path: improving natural products bioprospecting using an eco-evolutionary framework – the case of the octocorals". Critical Reviews in Biotechnology 38 2 (2017): 184-198. http://dx.doi.org/10.1080/07388551.2017.1331335. 10.1080/07388551.2017.1331335 Drap, P.; Royer, J. P.; Nawaf, M. M.; Saccone, M.; Merad, D.; López-Sanz, À.; Ledoux, J. B.; Garrabou, J.. "UNDERWATER PHOTOGRAMMETRY, CODED TARGET AND PLENOPTIC TECHNOLOGY: A SET OF TOOLS FOR MONITORING RED CORAL IN MEDITERRANEAN SEA IN THE FRAMEWORK OF THE ”PERFECT” PROJECT". ISPRS - International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences XLII-2/W3 (2017): 275-282. http://dx.doi.org/10.5194/isprs-archives-xlii-2-w3-275-2017. 10.5194/isprs-archives-xlii-2-w3-275-2017 Montero-Serra, Ignasi; Garrabou, Joaquim; Doak, Daniel F.; Figuerola, Laura; Hereu, Bernat; Ledoux, Jean-Baptiste; Linares, Cristina. "Accounting for Life-History Strategies and Timescales in Marine Restoration". Conservation Letters 11 1 (2017): e12341. http://dx.doi.org/10.1111/conl.12341. 10.1111/conl.12341 Garrabou, J.; Sala, E.; Linares, C.; Ledoux, J. B.; Montero-Serra, I.; Dominici, J. M.; Kipson, S.; et al. "Re-shifting the ecological baseline for the overexploited Mediterranean red coral". Scientific Reports 7 1 (2017): http://dx.doi.org/10.1038/srep42404. 10.1038/srep42404 Casas-Güell, Edgar; Cebrian, Emma; Garrabou, Joaquim; Ledoux, Jean-Baptiste; Linares, Cristina; Teixidó, Núria. "Structure and biodiversity of coralligenous assemblages dominated by the precious red coral Corallium rubrum over broad spatial scales". Scientific Reports 6 1 (2016): http://dx.doi.org/10.1038/srep36535. 10.1038/srep36535 Giakoumi, Sylvaine; Guilhaumon, François; Kark, Salit; Terlizzi, Antonio; Claudet, Joachim; Felline, Serena; Cerrano, Carlo; et al. "Space invaders; biological invasions in marine conservation planning". Diversity and Distributions 22 12 (2016): 1220-1231. http://dx.doi.org/10.1111/ddi.12491. 10.1111/ddi.12491 Cahill, A.E.; Aurelle, D.; Boisson, E.; Bouzaza, Z.; David, R.; Dejode, A.; Egea, E.; et al. "Determinants of connectivity in the marine environment: a multispecies approach. Integrative And Comparative Biology". Integrative And Comparative Biology 56 Supp-1 (2016): E29--E29. Published Arizmendi-Mejía, Rosana; Ledoux, Jean-Baptiste; Civit, Sergi; Antunes, Agostinho; Thanopoulou, Zoi; Garrabou, Joaquim; Linares, Cristina. "Demographic responses to warming: reproductive maturity and sex influence vulnerability in an octocoral". Coral Reefs 34 4 (2015): 1207-1216. http://dx.doi.org/10.1007/s00338-015-1332-9. 10.1007/s00338-015-1332-9 Arizmendi-Mejía, Rosana; Linares, Cristina; Garrabou, Joaquim; Antunes, Agostinho; Ballesteros, Enric; Cebrian, Emma; Díaz, David; Ledoux, Jean-Baptiste. "Combining Genetic and Demographic Data for the Conservation of a Mediterranean Marine Habitat-Forming Species". PLOS ONE 10 3 (2015): e0119585. http://dx.doi.org/10.1371/journal.pone.0119585. 10.1371/journal.pone.0119585 Montero-Serra, Ignasi; Linares, Cristina; García, Marina; Pancaldi, Francesca; Frleta-Valic, Maša; Ledoux, Jean-Baptiste; Zuberer, Frederic; et al. "Harvesting Effects, Recovery Mechanisms, and Management Strategies for a Long-Lived and Structural Precious Coral". PLOS ONE 10 2 (2015): e0117250. http://dx.doi.org/10.1371/journal.pone.0117250. 10.1371/journal.pone.0117250 Ledoux, Jean-Baptiste; Aurelle, Didier; Bensoussan, Nathaniel; Marschal, Christian; Féral, Jean-Pierre; Garrabou, Joaquim. "Potential for adaptive evolution at species range margins: contrasting interactions between red coral populations and their environment in a changing ocean". Ecology and Evolution 5 6 (2015): 1178-1192. http://dx.doi.org/10.1002/ece3.1324. 10.1002/ece3.1324 Haguenauer, A.; Zuberer, F.; Ledoux, J.-B.; Aurelle, D.. "Adaptive abilities of the Mediterranean red coral Corallium rubrum in a heterogeneous and changing environment: From population to functional genetics". Journal of Experimental Marine Biology and Ecology 449 (2013): 349-357. http://www.scopus.com/inward/record.url?eid=2-s2.0-84887389762&partnerID=MN8TOARS. 10.1016/j.jembe.2013.10.010 Ledoux, J.-B.; Aurelle, D.; Féral, J.-P.; Garrabou, J.. "Molecular forensics in the precious Mediterranean red coral, Corallium rubrum: Testing DNA extraction and microsatellite genotyping using dried colonies". Conservation Genetics Resources 5 2 (2013): 327-330. http://www.scopus.com/inward/record.url?eid=2-s2.0-84876858517&partnerID=MN8TOARS. 10.1007/s12686-012-9795-2 Aurelle, D.; Ledoux, J.-B.. "Interplay between isolation by distance and genetic clusters in the red coral Corallium rubrum: Insights from simulated and empirical data". Conservation Genetics 14 3 (2013): 705-716. http://www.scopus.com/inward/record.url?eid=2-s2.0-84877789238&partnerID=MN8TOARS. 10.1007/s10592-013-0464-0 Ledoux, J.-B.; Tarnowska, K.; Gérard, K.; Lhuillier, E.; Jacquemin, B.; Weydmann, A.; Féral, J.-P.; Chenuil, A.. "Fine-scale spatial genetic structure in the brooding sea urchin Abatus cordatus suggests vulnerability of the Southern Ocean marine invertebrates facing global change". Polar Biology 35 4 (2012): 611-623. http://www.scopus.com/inward/record.url?eid=2-s2.0-84858007684&partnerID=MN8TOARS. 10.1007/s00300-011-1106-y Fouquet, A.; Ledoux, J.-B.; Dubut, V.; Noonan, B.P.; Scotti, I.. "The interplay of dispersal limitation, rivers, and historical events shapes the genetic structure of an Amazonian frog". Biological Journal of the Linnean Society 106 2 (2012): 356-373. http://www.scopus.com/inward/record.url?eid=2-s2.0-84859887579&partnerID=MN8TOARS. 10.1111/j.1095-8312.2012.01871.x Aurelle, D.; Ledoux, J.-B.; Rocher, C.; Borsa, P.; Chenuil, A.; Féral, J.-P.. "Phylogeography of the red coral (Corallium rubrum): Inferences on the evolutionary history of a temperate gorgonian". Genetica 139 7 (2011): 855-869. http://www.scopus.com/inward/record.url?eid=2-s2.0-79960985316&partnerID=MN8TOARS. 10.1007/s10709-011-9589-6 Mokhtar-Jamaï, K.; Pascual, M.; Ledoux, J.-B.; Coma, R.; Féral, J.-P.; Garrabou, J.; Aurelle, D.. "From global to local genetic structuring in the red gorgonian Paramuricea clavata: The interplay between oceanographic conditions and limited larval dispersal". Molecular Ecology 20 16 (2011): 3291-3305. http://www.scopus.com/inward/record.url?eid=2-s2.0-80051672681&partnerID=MN8TOARS. 10.1111/j.1365-294X.2011.05176.x Ledoux, J.-B.; Mokhtar-Jamaï, K.; Roby, C.; Féral, J.-P.; Garrabou, J.; Aurelle, D.. "Genetic survey of shallow populations of the Mediterranean red coral [Corallium rubrum (Linnaeus, 1758)]: New insights into evolutionary processes shaping nuclear diversity and implications for conservation". Molecular Ecology 19 4 (2010): 675-690. http://www.scopus.com/inward/record.url?eid=2-s2.0-77749301207&partnerID=MN8TOARS. 10.1111/j.1365-294X.2009.04516.x Ledoux, J.-B.; Garrabou, J.; Bianchimani, O.; Drap, P.; Féral, J.-P.; Aurelle, D.. "Fine-scale genetic structure and inferences on population biology in the threatened Mediterranean red coral, Corallium rubrum". Molecular Ecology 19 19 (2010): 4204-4216. http://www.scopus.com/inward/record.url?eid=2-s2.0-77957243322&partnerID=MN8TOARS. 10.1111/j.1365-294X.2010.04814.x Garrabou, J.; Coma, R.; Bensoussan, N.; Bally, M.; Chevaldonné, P.; Cigliano, M.; Diaz, D.; et al. "Mass mortality in Northwestern Mediterranean rocky benthic communities: Effects of the 2003 heat wave". Global Change Biology 15 5 (2009): 1090-1103. http://www.scopus.com/inward/record.url?eid=2-s2.0-64949203781&partnerID=MN8TOARS. 10.1111/j.1365-2486.2008.01823.x Wichard, T.; Poulet, S.A.; Boulesteix, A.-L.; Ledoux, J.B.; Lebreton, B.; Marchetti, J.; Pohnert, G.. "Influence of diatoms on copepod reproduction. II. Uncorrelated effects of diatom-derived a,ß,¿,d-unsaturated aldehydes and polyunsaturated fatty acids on Calanus helgolandicus in the field". Progress in Oceanography 77 1 (2008): 30-44. http://www.scopus.com/inward/record.url?eid=2-s2.0-43049109466&partnerID=MN8TOARS. 10.1016/j.pocean.2008.03.002 Poulet, S.A.; Wichard, T.; Ledoux, J.B.; Lebreton, B.; Marchetti, J.; Dancie, C.; Bonnet, D.; et al. "Influence of diatoms on copepod reproduction. I. Field and laboratory observations related to Calanus helgolandicus egg production". Marine Ecology Progress Series 308 (2006): 129-142. http://www.scopus.com/inward/record.url?eid=2-s2.0-33644988450&partnerID=MN8TOARS. 10.3354/meps308129
Preprint	Bradley Moore; Natalie Grayson; Paul Scesa; Malia Moore; Jean-Baptiste Ledoux; Jessica Gomez-Garrido; Tyler Alioto; et al. "A widespread metabolic gene cluster family in metazoans". 2024. https://doi.org/10.21203/rs.3.rs-4859447/v1. 10.21203/rs.3.rs-4859447/v1 Beauvieux, Anaïs; Merigot, Bastien; Luyer, Jeremy Le; Fromentin, Jean-Marc; Couffin, Nathan; Brown, Adrien; Bianchimani, Olivier; et al. "Mesophotic zone as refuge: acclimation and in-depth physiological response of yellow gorgonians in the Mediterranean Sea". 2023. http://dx.doi.org/10.22541/au.167896294.48105379/v1. 10.22541/au.167896294.48105379/v1 Marques, João Pedro; Alves, Paulo Célio; Amorim, Isabel R.; Lopes, Ricardo J.; Moura, Mónica; Meyers, Gene; Sim-Sim, Manuela; et al. "Building a Portuguese Coalition for Biodiversity Genomics". 2023. http://dx.doi.org/10.32942/x20w3q. 10.32942/x20w3q
Thesis / Dissertation	Ledoux, Jean-Baptiste. "Biologie de la conservation du corail rouge, Corallium rubrum (Linnaeus, 1758) : impact du changement global sur l'évolution des populations infralittorales en Méditerranée Nord-Occidentale". PhD, Aix-Marseille Université, 2010. http://www.theses.fr/2010AIX22096. Ledoux, Jean-Baptiste. "Consequences of the protected development on the genetic structure of the subantarctic brooding sea-urchin Abatus cordatus (Verill, 1876), endemic of Kerguelen Island". Master, Aix-Marseille Université, 2004.

Other

Other output

The genome sequence of the octocoral Paramuricea clavata – a key resource to study the impact of climate change in the Mediterranean. 2019. Jean-Baptiste Ledoux; Fernando Cruz; Jèssica Gomez-Garrido; Regina Antoni; Julie Blanc; Daniel Gómez-Gras; Paula López-Sendino; et al. https://doi.org/10.1101/849158.
10.1101/849158

Activities

Oral presentation

	Presentation title	Event name Host (Event location)
2022/10/03	Genomic resources for the population genomics and conservation of temperate octocorals.	Biodiversity Genomics 2022 Sanger Institute https://virtual.venue-av.com/e/bg2022 (United Kingdom)
2022/07/07	Gradients of genetic diversity and differentiation across the distribution range of a Mediterranean coral: Patterns, processes and conservation implications	SIBECOL/AIL meeting (Aveiro, Portugal)
2021/12/02	Comparative population genetics of habitat-forming octocorals in two marine protected areas: eco- evolutionary and management implications	Encontro Nacional de Ecologia (Ponte de Lima, Portugal)
2020/11/10	Enhancing the effectiveness of restoration actions in coralligenous habitat: insights from a transregional thermotolerance experiment	MERCES: Marine Ecosystem Restoration in Changing European Seas - Final Meeting MERCES consortium Union's Horizon 2020 research and innovation programme under grant agreement No 689518
2020/07/03	Assesing the role of marine protected areas facing the climate change in temperate seas	VII International Symposium on Marine Sciences ISMS is organized biannually by the six Spanish universities offering the Bachelor of Marine Sciences (Barcelona, Spain)
2020/07/02	Comparative population genetics and Marine protected areas: The case study of two habitat-forming octocorals in the Catalan Sea.	VII International Symposium on Marine Sciences ISMS is organized biannually by the six Spanish universities offering the Bachelor of Marine Sciences (Barcelona, Spain)
2020/07/02	Population collapse of habitat-forming octocorals in Scandola marine protected area: the long-term study of gorgonian populations affected by the 2003 extreme warm summer	VII International Symposium on Marine Sciences ISMS is organized biannually by the six Spanish universities offering the Bachelor of Marine Sciences (Barcelona, Spain)
2020/07/02	Spatial patterns of genetic diversity in habitat- forming marine species and their overlap with marine protected areas	VII International Symposium on Marine Sciences ISMS is organized biannually by the six Spanish universities offering the Bachelor of Marine Sciences (Barcelona, Spain)
2019/12/04	Eco-evolutionary processes underlying the population dynamics in the threatened Mediterranean red coral.	Trend in Biodiversity and Evolution: Biodiversity, Ecology and Evolution in Mediterranean ecosystems (Porto, Portugal)
2019/09/24	Integrative restoration protocols for temperate mesophotic reefs: The case of the Mediterranean coralligenous habitats.	SER 2019, 8th World Conference on Ecological Restoration (Cape Town, South Africa)
2019/09/24	Success stories in restoration actions across coastal-marine ecosystems: The potential for synergies.	SER 2019, 8th World Conference on Ecological Restoration (Cape Town, South Africa)
2019/09/23	Insights into the eco-evolutionary processes underlying the population dynamics in the threatened Mediterranean red coral.	iMarCo2019 5th International Marine Connectivity Conference (Aveiro, Portugal)
2019/02/04	Fine-scale spatial genetic structure in a temperate octocoral: insights into the ecoevolutionary processes underlying the population dynamics in the threatened Mediterranean red coral. Barcelona, Spain, 4th-7th February, 2019.	1st Meeting of the Iberian Ecological Society & XIV AEET Meeting, (Barcelona, Spain)
2019/02/04	Integrating multiple approaches to identify winners and losers in high-diverse marine benthic communities in the face of global change.	1st Meeting of the Iberian Ecological Society & XIV AEET Meeting, (Barcelona, Spain)
2019/01/15	Restoration protocols for the Mediterranean coralligenous habitats.	3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions. SPA-RAC (Antalya, Turkey)
2019/01/15	Demography and disturbance levels of the coral Astroides calycularis (Pallas, 1766) in the Tunisian Marine Protected Area of Zembra (Central Mediterranean).	3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions. (Antalya, Turkey)
2019/01/15	Active restoration across marine coastal habitats: a focus on the Mediterranean Sea.	3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions. (Antalya, Turkey)
2019/01/15	Can facilitation processes enhance the effectiveness of restoration actions in the coralligenous habitats ?	3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions. SPA-RAC (Anta, Turkey)
2019/01/15	Enhancing the effectiveness of restoration actions in coralligenous habitats: Insights from a transregional thermotolerance experiment.	3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions. SPA-RAC (Antalya, Turkey)
2019/01/15	Advances in the conservation of red coral populations: Long-term demographic data, management tools and restoration activities.	3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions. SPA-RAC (Antalya, Turkey)
2018/10/22	Population genomics of the red coral Corallium rubrum: from local adaptation to conservation.	Congres de la SFE², Sfécologie2018 Société Française d'Ecologie et d'Evolution (Rennes, France)
2018/08/18	Integrating populations genetics in the management of Marine Protected Areas: complementary insights from the study of two habitat-forming octocorals in the Catalan Sea.	Evolution (Montpellier, France)
2018/05/23	Enhancing the effectiveness of restoration actions in a changing ocean: insights from a transregional thermotolerance experiment.	Second MERCES Annual Meeting, Barcelona, (Barcelona, Spain)
2018/05	Conservation biology of the Mediterranean coralligenous: what can we learn from population genetics?	Instituto de la Patagonia – Universidad de Magallanes (Punta Arenas, Chile)
2018	Conservation biology of the Mediterranean coralligenous: what can we learn from population genetics (microsatellite markers)?	Invited Speaker Universidad de Magallanes (Punta Arenas, Chile)
2017/12/12	Genetic diversity and population structure of the mesophotic Paramuricea macrospina in the Menorca Channel.	European Coral Reefs Symposium (Oxford, United Kingdom)
2017/03/01	Underwater photogrammetry, coded target and plenoptic technology: a set of tools for monitoring red coral in Mediterranean Sea in the framework of the “PERFECT” project.	Conference on 3D Virtual Reconstruction and Visualization of Complex Architectures (Int Soc Photogrammetry & Remote Sensing) (Nafplio, Greece)
2016/11/11	Are marine protected areas effective to cope with the effects of climate change in temperate rocky marine benthic ecosystems?	100th Western Naturalists Society (Monterey, United States)
2016/10/24	Postglacial range expansion shaped the spatial pattern of genetic diversity in a marine habitat forming species along the Eastern Adriatic coast: implications for conservation.	SFEcologie-2016 International Conference on Ecological Sciences. (Marseille, France)
2016/10/24	Ecology, evolution and conservation of species with extreme life-histories: the emblematic Mediterranean red coral Corallium rubrum.	SFEcologie-2016 International Conference on Ecological Sciences. (Marseille, France)
2016/10/17	Viabilitat dels boscos de gorgònia vermella a llarg termini davant fortes pertorbacions.	Planeta Oceà. XXXII Trobades científiques de la Mediterrània. (Menorca, Spain)
2016/05/19	Multiple stressors on temperate corals: insights from experimental, observational and modelling studies.	13th International Coral Reef Symposium (Honolulu (Hawaii), United States)
2014/11/25	T-MedNet: a temperature network for high resolution and long term monitoring of Mediterranean coastal waters stratification.	Monitoring for managing Mediterranean Marine Protected Areas (MPAs) MedPAN Network experience-sharing workshop (Tirana, Albania)
2014/11/16	Population genetics can enhance the management of a marine community with high socio-economical value.	2nd International Ocean Research Conference (IORC) (Barcelona, Spain)
2014/11/16	Harvesting, climate change and the future of Mediterranean red coral populations.	2nd International Ocean Research Conference (IORC) (Barcelona, Spain)
2014/10/29	Population genetics studies over contrasted spatial scales of two structural gorgonian species from the coralligenous: state-of-the-art and conservation implications.	Symposium on the conservation of coralligenous and other calcareous bio-concretions (Portoroz, Slovenia)
2014/10/29	Population genetics of Paramuricea clavata (Risso, 1826) i the eastern Adriatic Sea: Implications for its conservation and management	Symposium on the conservation of coralligenous and other calcareous bio-concretions SPA-RAC (Portoroz, Slovenia)
2014/10/29	Long-term demographic traits of red coral populations in the NW Mediterranean: Insights into management strategies.	Symposium on the conservation of coralligenous and other calcareous bio-concretions (Portoroz, Slovenia)
2014/09/29	Response of coralligenous to global change: Evidences from field and experiment studies in gorgonian forests.	Symposium on the conservation of coralligenous and other calcareous bio-concretions SPA-RAC (Portoroz, Slovenia)
2014/08/15	Harvesting, climate change and the future of Mediterranean red coral populations.	International Marine Conservation Congress (Glasgow, United Kingdom)
2013/12/14	Conservation of Mediterranean coralligenous assemblages.	15èmes Journées Association Tunisienne de Sciences de la Mer, (Mehida, Tunisia)
2013/11/26	Conservation biology of longlived marine species: what can we learn from population genetics studies?	Symposium on Integrating New Advances in Mediterranean Oceanography and Marine Biology (MEDOCEAN) Instituto de Ciencias del Mar (Barcelona, Spain)
2013/11/26	What can be learned from the study of connectivity and demography of sessile organisms for the design of marine conservation measures? A case study of the Mediterranean red gorgonian. , Barcelona, Spain, November 26-29 2013.	Symposium on Integrating New Advances in Mediterranean Oceanography and Marine Biology (MEDOCEAN) Instituto de Ciencias del Mar (Barcelona, Spain)
2013/10/21	The role of Marine Reserves in protecting long-lived and structural species under a warming world: lessons from the Mediterranean Sea. , Marseilles-Corsica, France October 21-27 2013.	IMPAC3 3rd International Marine Protected Areas Congress (Marseille, France)
2011/12/05	Evolutionary conservation biology of the red coral.	Trend in Biodiversity and Evolution: New challenges in conservation genetics CIBIO (Porto, Portugal)
2011/12	Conservation biology of the red coral, Corallium rubrum (Linnaeus, 1758): Evolution of the shallow populations facing the global change in the North-Western Mediterranean Sea. Porto, Portugal, 2011.	CIIMAR – Interdisciplinary Centre of Marine and Environmental Research (Porto, Portugal)
2011/09/26	Evolutionary conservation biology of the Mediterranean coralligenous communities.	World Conference on Marine Biodiversity (Aberdeen, United Kingdom)
2011/07	Conservation biology of the red coral, Corallium rubrum (Linnaeus, 1758): Evolution of the shallow populations facing the global change in the North-Western Mediterranean Sea.	Invited Speaker Universitat de Barcelona, departament de Genetica (Barcelona, Spain)
2011/04	Conservation biology of the red coral, Corallium rubrum (Linnaeus, 1758): Evolution of the shallow populations facing the global change in the North-Western Mediterranean Sea.	Invited Speaker Instituto de Ciencias del Mar ICM-CSIC (Barcelona, Spain)
2010/12	Conservation biology of the red coral, Corallium rubrum (Linnaeus, 1758): Evolution of the shallow populations facing the global change in the North-Western Mediterranean Sea.	Invited Speaker GEOMAR Helmholtz Centre for Ocean Research Kiel (Kiel, Germany)
2010/05/10	Experimental approach to the potential response of a long-lived invertebrate species facing the warming in the NW Mediterranean.	CIESM Congress (Venice, Italy)
2009/01/25	Mass mortality events in NW Mediterranean gorgonian populations: understanding the impact and potential recovery through a demographic approach.	ASLO Aquatic Science Meeting (Nice, France)
2009/01/15	Interest and application of genetic markers for the study and conservation of Mediterranean sessile invertebrates.	First Mediterranean symposium on the conservation of the coralligenous and other calcareous bio-concretions SPA-RAC (Tabarka, Tunisia)
2007/01/07	Evolutionnary conservation biology of Corallium rubrum.	Recent Advances In Conservation Genetics Hawai Institue of marine Biology (United States)

Supervision

	Thesis Title Role	Degree Subject (Type) Institution / Organization
2023/02/01 - 2023/07/31	Comparative population genomics of two marine habitat forming seaweeds Laminar hyperborea and Ascophyllum nodosum. Supervisor	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2023/01/07 - 2023/07/07	Population genomics of a Mediterranean habitat-forming octocoral sets the evolutionary stage for the research on genetic adaptation to climate change Supervisor	Master Sciences de la mer parcours océanographie biologique et écologie marine (Master) Aix-Marseille Université, France
2022/01/01 - 2022/05/31	Development of genomic resources of Mediterranean and Atlantic octocorals from the Alcyonium and Eunicella genus Supervisor	Master in biology (Master) Elleniko Kentro Thalassion Ereunon, Greece
2021/10/01 - 2022/03/31	Exploring Genome Wide Association Study (GWAS) for the identification of genetic variants involved in the differential response to thermal stress in the red gorgonian, Paramuricea clavata. Supervisor	Master of biology (Master) School of biological Science, University of Aberdeen, United Kingdom
2021/06/01 - 2021/09/30	Comparing the fine scale population genetic structure among three red coral populations Supervisor	Biologia Licenciatura (Scientific initiation)
2019 - 2020	Impact of the quaternary glaciations on the genetic diversity of Halicarcinus planatus (Fabricius, 1775) in the Magallanes region (Southern Chile) Co-supervisor	Master (Master) Universidad de Magallanes Centro de Investigación GAIA Antártica, Chile
2017 - 2018	Fine-scale genetic structure of the threatened red coral, Corallium rubrum (Linnaeus, 1758) inferred from microsatellite markers Co-supervisor	Master of Ecology and Nature Conservation (Master) University of Zagreb Faculty of Science Department of Biology, Croatia Institut de Ciències del Mar, Spain
2016 - 2017	Spatial genetic structure of habitat-forming species: implications for the design and management of Marine Protected Areas from the North Catalan Sea Supervisor	Master of Science in Marine Biodiversity and Conservation within the International Master of Science in Marine Biodiversity and Conservation EMBC+ (Master) Sorbonne Université Campus Pierre et Marie Curie, France Institut de Ciències del Mar, Spain
2015 - 2016	Spatial population genetic structure in a well-preserved red coral population and conservation implications Co-supervisor	Ciències del Mar: Oceanografia i Gestió del Medi Marí (Master) Institut de Ciències del Mar, Spain Universitat de Barcelona Departament de Biologia Animal, Spain
2012 - 2015	Conservation of marine habitat-forming species under climate change: population genetics and demographic responses of the Mediterranean red gorgonian Paramuricea clavata. Co-supervisor	PhD (PhD) Institut de Ciències del Mar, Spain Universitat de Barcelona Departament de Biologia Animal, Spain
2013 - 2014	Reproduction and mating system in Corallium rubrum: the case study of two populations with contrasted densities Co-supervisor	Ciències del Mar: Oceanografia i Gestió del Medi Marí (Master) Institut de Ciències del Mar, Spain Universitat de Barcelona Departament de Biologia Animal, Spain
2013 - 2013	Microsatellite based paternity analyses in the red coral, Corallium rubrum. Co-supervisor	Voluntary internship (6 months) (Scientific initiation) Institut de Ciències del Mar, Spain
2012 - 2013	Population genetic structure of Paramuricea clavata (Risso, 1826) in the eastern Adriatic as revealed by microsatellite markers Supervisor	Master in Ecology and Nature Protection (Master) Institut de Ciències del Mar, Spain University of Zagreb Faculty of Science Department of Biology, Croatia
2011 - 2011	Molecular forensic in the red coral, Corallium rubrum. Supervisor	Undergraduate (Other) Universitat de Barcelona Departament de Biologia Animal, Spain
2009 - 2009	Génétique de populations du corail rouge, Corallium rubrum, en Méditerranée Nord-Occidentale. Co-supervisor	Master student (Master) Aix-Marseille Université, France
2006 - 2006	Population genetics of the the subantarctic brooding sea-urchin Abatus cordatus. Co-supervisor	Aix-Marseille Université, France

Event organisation

	Event name Type of event (Role)	Institution / Organization
2021/09 - Current	Organization and chair of a session entitled "Long-lived structural species in a changing world: eco-evolutionary studies with conservation and restoration implications" during the Marine Evolution_2 in September 2021 (2021/09 - 2021/09) Congress (Other)	Centro de Ciências do Mar, Portugal
2019/09/23 - 2019/09/25	"The future of animal forest in a changing world: what can be learnt from connectivity studies of structural anthozoans." Organized in collaboration with Drs. Didier Aurelle and Frédérique Viard in the framework of the iMarCo2019 5th International Marine Connectivity Conference. The main objective of the workshop was to 1) Provide a state of the art on patterns and eco-evolutionary processes of temperate corals in European waters; 2) Identify gaps of knowledge; 3)build up a network of scientists; 4) produce a synthesis paper on this topic. (2019) Workshop (Co-organisor)	iMarCo2019 5th International Marine Connectivity Conference, Portugal

Jury of academic degree

	Topic Role	Candidate name (Type of degree) Institution / Organization
2022/12/15	I was invited by Dr. Joana Xavier to be part of the tribunal of the Master thesis of Ana Sofia Soares entitled "Local ecological knowledge of vulnerable marine ecosystems of the Portuguese mainland continental shelf and upper slope" from the University of Aveiro (Thesis) Main arguer	Ana Sofia Soares (Master) Universidade de Aveiro, Portugal
2022/05/02	I was invited by Dr. Marcio Coelho to be part of the tribunal of the Master thesis of Sandra Raposo Costa entitled "Octocoral Biodiversity in Portugal: A Barcoding Approach Coupling Long-range PCR and Long-read Sequencing to Assemble Mitochondrial Genomes" from the University of Algarve (Thesis) Main arguer	Sandra Raposo Costa (Master) Universidade do Algarve, Portugal
2020/07/31	I was invited by Drs. Joana Xavier and Astrid Schuster to take part in the jury for the bachelor degree of Sofia Cupertino de Miranda Batista. The thesis was entitled "Ecology and evolution of Desmophyllum pertusum: a bibliographic survey to characterize the current state of knowledge" (Thesis) Main arguer	Sofia Cupertino de Miranda Batista (Other) Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal

Association member

	Society Organization name	Role
2020/01/01 - Current	Sociedad Portuguesa de Ecologia
2019 - Current	Sociedad Ibérica de Ecología	Member
2017 - Current	European Society for Evolutionary Biology	member
2016 - Current	Société Française d'Ecologie et d'Evolution	Member

Committee member

	Activity description Role	Institution / Organization
2023/01/01 - Current	Member of the Scientific Committee of European Marine Biological Resource Centre (EMBRC) France Member	European Marine Biological Resource Centre, France
2018 - 2022	PhD thesis committee member of Zambra Lopez PhD title: "Evaluation of the potential of the subantarctic crab Halicarcinus planatus (Hymenosomatidae) to become the first marine invader in Antarctica: physiological and dispersive capacity" I am involved in the PhD committee of Zambra Lopez and I am taking part in the population genetics/genomics part (RADseq) of her PhD thesis. http://www.antarcticgenomics.cl/team/?lang=en Advisor / Consultant	Universidad de Chile, Chile
2014 - 2018	PhD thesis committee member of Dr. Ignasi Montero-Serra PhD title: "Resilience of Mediterranean long-lived gorgonians in a changing world: insights from life history theory and quantitative ecology" Advisor / Consultant	Universitat de Barcelona Departament de Biologia Animal, Spain Institut de Ciències del Mar, Spain
2013 - 2018	PhD thesis committee member of Dr. Raouia Gahnem PhD title: "Effets des changements climatiques sur les espèces et les habitats de l'aire marine protégée de zembra" Advisor / Consultant	Université de Tunis El Manar, Tunisia

Course / Discipline taught

	Academic session	Degree Subject (Type)	Institution / Organization
2020/02/28 - 2020/02/28	Academic session 2019-2020 Curso de Doutoramento em Biotecnologia Marinha e Aquacultura One invited talk entitled "From natural products to the restoration ecology of octocorals: Eco-evo insights for biotechnologists" (2 hours)	Doutoramento em Biotecnologia Marinha e Aquacultura (Curso de doutoramento (conclusão de unidades curriculares))	Universidade do Porto Faculdade de Ciências, Portugal
2019/09/02 - 2019/09/07	Training Course in Marine Restoration of the Mediterranean (Tricase Porto- Apulia region, Italy). This course was launch in the framework of the Merces Project (http://www.merces-project.eu) to transfer the knowledge on marine restoration acquired in the project. The main objective of my lectures during this course was to link evolutionary biology, population genetics/genomics and restoration ecology. http://www.merces-project.eu/?q=content/education-and-training	Inputs of population genetic/genomics and evolutionary biology for restoration ecology	Università del Salento, Italy Università Politecnica delle Marche, Italy
2012 - 2018	First semester (2 to 4 hours each year, shared between practical and theoretical course) Title: “Metapopulation and population genetics: how can we use genetic data to answer ecological questions?”	Master Gestio i restoracio del medi natural (Master)	Universitat de Barcelona Departament de Biologia Animal, Spain
2008 - 2009	First semester (16 hours - Practical course) Population genetics	Master Biologie et Ecologie Marine (Master)	Aix-Marseille Université, France
2008 - 2009	First semester (16 hours - Practical course) Introduction to population dynamics and to population genetics	Licence Science de la Mer et Environnement (Licence)	Aix-Marseille Université, France
2007 - 2009	First semester (18 hours - Practical course) Population genetics	Master Biologie et Ecologie Marine (Master)	Aix-Marseille Université, France

Evaluation committee

	Activity description Role	Institution / Organization	Funding entity
2023 - 2023	Grant review for the French Institute for Marine Exploitation (IFREMER) in the contexte of ¿Appel d¿offres scientifiques pour demande de campagne¿ Evaluator
2023 - 2023	Tribunal for 1 postdoctoral contract with reference 2023_SPONBIODIV Evaluator	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2022 - 2023	Scientific committee of the Blue Think Conference Evaluation of submitted abstracts Evaluator	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2022 - 2022	Tribunal for 2 research scholarships with reference 2022_026_BI_M_DEEPbaseline 2022_025_BI_M_DEEPbaseline Evaluator	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental
2022 - 2022	Tribunal for 1 technician contract with reference 2022_050_TS_BLUEFORESTING Evaluator	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
2021 - 2021	Tribunal for 2 scolarships: 2021_Verao-com-ciencia_67 2021_Verao-com-ciencia_68 Evaluator	Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal	Associação para a Inovação e Desenvolvimento da FCT

Interview (newspaper / magazine)

	Activity description	Newspaper / Forum
2023/05	Press release linked to the paper entitled "Global patterns and drivers of genetic diversity among marine habitat-forming species"	Publico
2022/07	Press release covering the paper entitled "Mass mortality events linked to marine heat waves in the Mediterranean" published in Global Change Biology. News published in more than 30 journals or websites	Publico, Expresso etc
2021/02/24	Press release covering the conservation and management of the red coral, Corallium rubrum, in the Mediterranean Sea.	The Atlantic
2020/10/26	Press release describing the paper "The Genome Sequence of the Octocoral Paramuricea clavata – A Key Resource To Study the Impact of Climate Change in the Mediterranean"	Publico
2020/09/03	Press release covering the paper "The Genome Sequence of the Octocoral Paramuricea clavata – A Key Resource To Study the Impact of Climate Change in the Mediterranean".	Vanguardia
2017/09	Description of a field campaign conducted in 2016 in the Marine reserve of Scandola (Corsica-France) in the framework of the red coral monitoring program conducted with the Parc Naturel Regional de Corse (France).	Ça m'intéresse newspaper

Interview (tv / radio show)

	Program	Topic
2022/07 - Current	TV interview covering the paper entitled "Mass mortality events linked to marine heat waves in the Mediterranean" published in Global Change Biology. News published in more than 30 journals or websites

Other jury / evaluation

	Activity description	Institution / Organization
2010 - Current	Manuscript peer review over 40 papers in 17 different scientific journals including high citation index journal (Marine and Freshwater Ecosystems, Biological Conservation, Conservation Biology, Conservation Genetics, Conservation Genetics Resources, Evolutionary Applications, Heredity, Marine Biodiversity Records, Marine Biology, Marine Environmental Research, Molecular Ecology, Molecular Ecology Resources, Ocean and Costal Management, PlosOne, Polar Biology, Scientific Reports)
2021 - 2021	Grant review for the 2nd Call for Hellenic Foundation for Research and Innovation’s Research Projects to support Faculty Members and Researchers
2020 - 2020	Grant review for the French Institute for Marine Exploitation (IFREMER) in the contexte of ¿Appel d¿offres scientifiques pour demande de campagne¿	Ifremer, France
2012 - 2012	Grant review for the Israel Science Foundation	Israel Science Foundation, Israel

Distinctions

Other distinction

2011	Certificat d'aptitude à l'hyperbarie Mention Classe 1B (Scientific Scuba Diving) Institut National de la Plongée Professionnelle, France Centre National de la Recherche Scientifique, France
2004	Merit-based Scholarship for my post graduate diploma (DEA = Master)