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J. Miguel Sanches (JS) received his Ph.D. degree from the Instituto Superior Técnico (IST), University of Lisbon, in 2003. He has received his habilitation in 2013 in Biomedical Engineering, and following an extensive teaching path in the areas of signal processing, systems and control, JS became a Full Professor at the Bioengineering Department at IST in 2022. Of note, he is also Coordinator of the Master and Doctoral programs in Biomedical Engineering and he coordinates the scientific area of Biomedical Systems and Biosignals from the Bioengineering Department at Técnico. Since 2012 until 2022 he was the Coordinator for the Life-Engineering thematic area from the Laboratory for Robotics and Engineering Systems, reflecting his commitment to education duties. JS is a Senior researcher of the Institute for Systems and Robotics, and a Senior researcher at the Laboratory of Evolutionary Systems and Biomedical Engineering. JS has a strong track record in the field of pattern recognition, machine learning and signal processing, where Bayesian frameworks are the preferred approaches. In particular, his work has been focused in Biomedical Engineering, namely, in biological and medical image processing of physiological and behavioural data. Currently, JS is highly motivated to develop new Artificial Intelligence and machine learning solutions that can be applied to a wide range of healthcare needs. His research activities are spread by two main lines of research: i) establishing methodological strategies to quantify and map molecular and morphometric features of cancer biomarkers. JS has developed two bioimaging algorithms that can be explored in research and diagnostic labs to unravel protein regulation mechanisms and to identify protein expression patterns associated with disease, and ii) design new technological tools for mental health, in particular for psychiatry. These tools aims at obtaining quantitative measures of mental status in psychiatric patients (mainly depression) or workers involved in critical tasks for fatigue quantification and detection. As a group leader, JS has been able to create a genuine multidisciplinary and stimulating environment where researchers, ranging from biological and medical areas, work along with engineers and computer scientists. JS has more than 200 publications, h-index 36 and over 4500 citations. Further, his expertise is widely recognized at the international level as attested by invitations to present his work in renowned scientific and consortia meetings, such as in the Hereditary Breast and Gastric Cancers meeting (Italy) and in a Fluorescence Microscopy Imaging, Statistics Workshop at Imperial College London (UK). JS has been able to raise competitive funding as PI of research projects, and has supervised 12 PhD students and more than 60 MSc students.
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Identification

Personal identification

Full name
Joao Sanches

Citation names

  • Sanches, Joao

Author identifiers

Ciência ID
191C-E679-75D8
ORCID iD
0000-0001-9089-2740
Scopus Author Id
7004263858

Email addresses

  • jmrs@tecnico.ulisboa.pt (Professional)
  • jmrs@ist.utl.pt (Professional)
  • joaosanches2014@gmail.com (Personal)

Telephones

Telephone
  • 218418195 (Professional)

Addresses

  • Instituto Superior Técnico. Torre Norte, sala 6.09, Av. Rovisco Pais, 1, 1049-001, Lisboa, Lisboa, Portugal (Professional)

Websites

Languages

Language Speaking Reading Writing Listening Peer-review
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
French Upper intermediate (B2) Upper intermediate (B2) Upper intermediate (B2) Advanced (C1) Upper intermediate (B2)
Spanish; Castilian Intermediate (B1) Upper intermediate (B2) Intermediate (B1) Advanced (C1) Upper intermediate (B2)
Education
Degree Classification
2013 - 2013
Concluded
 Engenharia Biomédica (Título de Agregado)
Major in Engenharia Biomédica
Universidade de Lisboa Instituto Superior Técnico, Portugal
1998/10 - 2003/04/01
Concluded
 Engenharia Electrotécnica e de Computadores (Doutoramento)
Major in Engenharia Electrotécnica e de Computadores
Universidade de Lisboa Instituto Superior Técnico, Portugal
"3D bayesian reconstruction from ultrasound sequences" (THESIS/DISSERTATION)
1993/10/01 - 1996/10
Concluded
 Engenharia Electrotécnica e de Computadores (Mestrado)
Major in Engenharia electrotécnica e de Computadores
Universidade de Lisboa Instituto Superior Técnico, Portugal
1985/10/01 - 1991/10/01
Concluded
 Ciências de Engenharia - Engenharia Electrotécnica e de Computadores (Licenciatura)
Major in telecomunicações e electrónica
Universidade de Lisboa Instituto Superior Técnico, Portugal
Affiliation

Science

Category
Host institution 		Employer
1998 - Current Coordinating Researcher (Research) Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
1991 - 1998 Researcher (Research) Instituto de Engenharia de Sistemas e Computadores, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2022/03 - Current Full Professor (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
(...)
2017/01/01 - 2022/02 Associate Professor (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
2003/01/01 - 2017/01/01 Assistant Professor (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
1996 - 2003 Assistant (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
1993 - 1996 Assistant (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
1991 - 1993 Assistant (Polytechnic Teacher) Escola Superior Náutica Infante D Henrique, Portugal
Escola Superior Náutica Infante D Henrique, Portugal

Positions / Appointments

Category
Host institution 		Employer
2023/01/01 - Current Coordinator of the Scientific Area of Biomedical Systems and Biosignals, Bioengineering Department Universidade de Lisboa Instituto Superior Técnico, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
2022 - Current Coordinator of the NeuroData, Erasmus Mundus Joint Master Degree Programme in Brain and Data Science (EMJM) Universidade de Lisboa Instituto Superior Técnico, Portugal
Department of Bioengineering, Universidade de Lisboa Instituto Superior Técnico, Portugal
2019 - Current Coordinator of the Master on Biomedical Engineering Universidade de Lisboa Instituto Superior Técnico, Portugal
Department of Bioengineering, Universidade de Lisboa Instituto Superior Técnico, Portugal
2017 - Current Mobility Coordinator of Biomedical Engineering Universidade de Lisboa Instituto Superior Técnico, Portugal
Department of Bioengineering, Universidade de Lisboa Instituto Superior Técnico, Portugal
2015 - Current Coordinator for the Life-engineering thematic area Laboratório de Robótica e Sistemas de Engenharia, Portugal
Universidade de Lisboa Instituto Superior Técnico, Portugal
2022/01/01 - 2023/12/31 Deputy President for Scientific Affairs Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
2015 - 2022 Member of the Board of Directors Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
2009 - 2013 President Associação Portuguesa de Reconhecimento de Padrões (APRP), Portugal
Associação Portuguesa de Reconhecimento de Padrões (APRP), Portugal
Projects

Grant

Designation Funders
2023/01/01 - 2025/12/31 I-CARD - Cellular architecture deconstructed: Artificial Intelligence to predict cancer invasion
2022.02665.PTDC
Principal investigator
Universidade de Lisboa Instituto Superior Técnico, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2022/01/01 - 2023/06/30 E-SIGN - Nuclear cues in invasive cancer: overriding E-cadherin dysfunction
EXPL/MED-ONC/0386/2021
Researcher
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2021 - 2023 NICE - Nuclear biomarkers for predictive prognosis of hereditary diffuse gastric cancer
Nice/202101
Researcher
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
 No Stomach for Cancer
Ongoing
2018/07/01 - 2022/03/31 E-RISK - Oral facial congenital malformations and gastric cancer risk: a matter of E-cadherin-mediated cell-extracellular matrix adhesion
PTDC/MED-GEN/30356/2017
Researcher
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2018/11/01 - 2021/10/31 CAPTURE - Mechano-dependent capture of circulating tumour cells: a cell-ECM based approach coupled with cancer specific glycomarkers
POCI-01-0145-FEDER-303083
Principal investigator
Laboratório de Robótica e Sistemas de Engenharia, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2020/10/01 - 2021/09/30 Lab@Home: Home Laboratories to Support Practical and Experimental Activities in Scenarios of Limited or Inexistent Presential Contact
1018P.05878
Instituto de Telecomunicações Lisboa, Portugal
 Universidade de Lisboa Instituto Superior Técnico
Ongoing
2020/05/01 - 2021/04/30 ReATeC - Remote Assessment and Telemonitoring of COVID-19
LISBOA-01-02B7-FEDER-069101
Principal investigator
Agência Nacional de Inovação SA
2020/03/01 - 2020/09/30 e-CoVig: Sistema Automático de Vigilância Remota de Sintomatologia Vital COVID-19
255_596880547
Instituto de Telecomunicações Lisboa, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2020/05/01 - 2020/08/31 e-CoVig, COVID-19 Vital Symptomatology Remote Surveillance Automated System
255
Principal investigator
Laboratório de Robótica e Sistemas de Engenharia, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2016 - 2018 TRACE - Tracing gastric cancer using quantitative bioimaging analysis
PTDC/BBB-IMG/0283/2014
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
 Associação para a Inovação e Desenvolvimento da FCT
Concluded
2016 - 2018 SENSE - Sensing dysfunctional E-cadherin cells in gastric epithelia
PTDC/BIM-ONC/0281/2014
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2013 - 2015 NeuroPhyslm - Non-invasive quantitative imaging of brain physiology: applications to aging and small vessel diseases
PTDC/BBB-IMG/2137/2012
Researcher
Universidade de Lisboa Instituto Superior Técnico, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2012 - 2014 INScan - Spectrometer in the Ultraviolet/Visible/NIR range
QREN-21621
Researcher
Universidade de Lisboa Instituto Superior Técnico, Portugal
Concluded
2011 - 2013 Dyn Imag - Noninvasive dynamic neuroimaging in epilepsy
PTDC/SAU-ENB/112294/2009
Researcher
Universidade de Lisboa Instituto Superior Técnico, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2010 - 2012 Fibromyalgia
FCT - PTDC/SAU-BEB/104948/2008
Principal investigator
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2008 - 2011 NeuroImage - Neuroimaging investigation of learning mechanisms in the human brain: new methodological approaches
PTDC/SAU-BEB/65977/2006
Researcher
Universidade de Lisboa Instituto Superior Técnico, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2008 - 2011 NeuroImage - Neuroimaging investigation of learning mechanisms in the human brain: new methodological approaches
PTDC/SAU-BEB/65977/2006
 Fundação para a Ciência e a Tecnologia

Contract

Designation Funders
2018/11/22 - 2022/02/21 Captura de Células Tumorais Circulantes: uma estratégia baseada na interacção célula-matriz combinada com glicomarcadores específicos para o cancro
PTDC/BTM-SAL/30383/2017
International Iberian Nanotechnology Laboratory, Portugal

Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal

Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2020/11/23 - 2021/02/23 AVC em translação: Biomarcadores para diagnóstico e decisão terapêutica no AVC isquémico
PTDC/MEC-NEU/31674/2017
Centro Hospitalar Universitário de Santo António, Portugal

Universidade do Porto Instituto de Biologia Molecular e Celular, Portugal

Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
Outputs

Publications

Book
  1. Narotamo, H.; Sanches, J.M.; Silveira, M.. Segmentation of Cell Nuclei in Fluorescence Microscopy Images Using Deep Learning. 2019.
    10.1007/978-3-030-31332-6_5
  2. Sarbazvatan, S.; Ventura, R.; Esteves, F.F.; Lima, S.Q.; Sanches, J.M.. A Novel Graph-Based Approach for Seriation of Mouse Brain Cross-Section from Images. 2019.
    10.1007/978-3-030-31332-6_40
  3. Seruca, R.; Suri, J.S.; Sanches, J.M.. Fluorescence Imaging and Biological Quantification. 2017.
    10.1201/9781315121017
  4. Fernandes, M.S.; Ferro, A.; Carneiro, P.; Seruca, R.; Sanches, J.M.. Quantum dots: Concepts, imaging, and therapeutic applications in cancer. 2017.
  5. Afonso, M.; Sanches, J.M.. Noise decomposition using polynomial approximation. 2015.
    10.1007/978-3-319-19390-8_18
  6. Martín-Martínez, D.; Domingues, A.; Casaseca, P.; Alberola-López, C.; Miguel Sanches, J.. PPG beat reconstruction based on shape models and probabilistic templates for signals acquired with conventional smartphones. 2015.
    10.1007/978-3-319-19390-8_67
  7. Vegas-Sánchez-Ferrero, G.; Martín-Fernández, M.; Sanches, J.M.. A gamma mixture model for IVUS imaging. 2014.
    10.1007/978-1-4614-7425-8_13
  8. Ribeiro, R.; Marinho, R.T.; Suri, J.; Sanches, J.M.. Ultrasound liver surface and textural characterization for the detection of liver cirrhosis. 2014.
    10.1007/978-1-4614-8498-1_6
  9. Seabra, J.; Pedro, L.M.; Fernandes E Fernandes, J.; Sanches, J.M.. Ultrasound profile of carotid plaque: A new approach towards stroke prediction. 2014.
    10.1007/978-1-4614-7425-8_14
  10. Saba, L.; Sanches, J.M.; Pedro, L.M.; Suri, J.S.. Multi-modality atherosclerosis imaging and diagnosis. 2014.
    10.1007/978-1-4614-7425-8
  11. Relvas, V.; Sanches, J.M.; Figueiredo, P.. Scalp EEG continuous space ERD/ERS quantification. 2013.
    10.1007/978-3-642-38628-2_73
  12. Afonso, D.; Sanches, J.M.R.. Detection of carotid plaque symptoms using ultrasound imaging. 2013.
    10.1007/978-3-642-38628-2_69
  13. Esménio, S.; Figueiredo, J.; Seruca, R.; Sanches, J.M.. E-cadherin radial distribution characterization for mutation detection purposes. 2013.
    10.1007/978-3-642-38628-2_20
  14. Ribeiro, R.; Marinho, R.T.; Sanches, J.M.. Cirrhosis prognostic quantification with ultrasound: An approximation to model for end-stage liver disease. 2013.
    10.1007/978-3-642-38628-2_65
  15. Afonso, M.V.; Sanches, J.M.R.. A total variation based reconstruction algorithm for 3D ultrasound. 2013.
    10.1007/978-3-642-38628-2_17
  16. Ribeiro, F.; Castanheira-Dinis, A.; Sanches, J.M.; Dias, J.M.. Assessment of image quality using a pseudophakic eye model for refractive evaluation. 2013.
    10.1007/978-3-642-38628-2_64
  17. Rodrigues, M.L.; Figueiredo, P.; Sanches, J.M.. A Bayesian approach to perfusion imaging using ASL MRI. 2013.
    10.1007/978-3-642-38628-2_82
  18. Seabra, J.; Pedro, L.M.; Fernandes E Fernandes, J.; Sanches, J.. Ultrasound plaque enhanced activity index for predicting neurological symptoms. 2011.
    10.1007/978-3-642-21257-4_23
  19. Vitrìa, J.; Sanches, J.; Hernández, M.; Sanches, J.M.; Micó, L.; Cardoso, J.S.. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface. 2011.
    10.1007/978-3-642-21257-4
  20. Ribeiro, R.; Marinho, R.; Velosa, J.; Ramalho, F.; Sanches, J.M.. Diffuse liver disease classification from ultrasound surface characterization, clinical and laboratorial data. 2011.
    10.1007/978-3-642-21257-4_21
  21. Afonso, D.; Figueiredo, P.; Sanches, J.M.. Automatic hyperparameter estimation in fMRI. 2011.
    10.1007/978-3-642-21257-4_15
  22. Belo, D.; Coito, A.L.; Paiva, T.; Sanches, J.M.. Topographic EEG brain mapping before, during and after obstructive sleep apnea episodes. 2011.
    10.1007/978-3-642-21257-4_70
  23. Ribeiro, R.; Sanches, J.. Fatty liver characterization and classification by ultrasound. 2009.
    10.1007/978-3-642-02172-5_46
  24. Pires, P.; Paiva, T.; Sanches, J.. Sleep/wakefulness state from actigraphy. 2009.
    10.1007/978-3-642-02172-5_47
  25. Caldeira, L.L.; Sanches, J.M.. Pharmacokinetic perfusion curves estimation for liver tumor diagnosis from DCE-MRI. 2008.
    10.1007/978-3-540-69812-8_78
  26. Marques, M.; Neves, A.; Marques, J.S.; Sanches, J.; Marques, Manuel; Neves, Alexandre; Marques, Jorge S.; Sanches, Joao. The Papoulis-Gerchberg algorithm with unknown signal bandwidth. 2006.
    10.1007/11867586_41
  27. Sanches, J.M.; Marques, J.S.. MAP signal reconstruction with non regular grids. 2004.
  28. Sanches, J.; Marques, J.S.; Pinto, F.; Ferreira, P.J.; Sanches, J; Marques, JS; Pinto, F; Ferreira, PJ. A 3D ultrasound system for medical diagnosis. 2003.
    10.1007/978-3-540-44871-6_103
  29. Sanches, J.M.; Marques, J.S.; Sanches, JM; Marques, JS. A MAP estimation algorithm using IIR recursive filters. 2003.
    10.1007/978-3-540-45063-4_28
  30. Sanches, J.M.; Marques, J.S.. A fast MAP algorithm for 3D ultrasound. 2001.
    10.1007/3-540-44745-8_5
Book chapter
  1. Manya V. Afonso; J. Miguel Sanches. "Blind inpainting and outlier detection using logarithmic transformation and total variation". In Vascular and Intravascular Imaging Trends, Analysis, and Challenges, Volume 1, edited by Radeva, Petia. IOP Publishing, 2019.
    Published • 10.1088/2053-2563/ab01fach7
  2. Fernandes, M.S.; Sanches, J.M.; Seruca, R.. "Targeting the PI3K signalling as a therapeutic strategy in colorectal cancer". 35-53. 2018.
    10.1007/978-3-030-02771-1_4
  3. Ferro, A.; Carneiro, P.; Fernandes, M.S.; Mestre, T.; Sanches, J.M.; Seruca, R.. "Illuminating the cycle of life". 201-230. 2017.
  4. Fernandes, Maria Sofia; Ferro, Anabela; Carneiro, Patrícia; Seruca, Raquel; Sanches, João M.. "Quantum dots: Concepts, Imaging and Therapeutic Applications in Cancer". In Fluorescence Imaging and Biological Quantification, 105-118. CRC Press, 2017.
    10.1201/9781315121017-7
  5. Figueiredo, J.; Ribeiro, A.S.; Mestre, T.; Esménio, S.; Fonseca, M.; Paredes, J.; Seruca, R.; Sanches, J.M.. "Capturing quantitative features of protein expression from in situ fluorescence microscopic images of cancer cell populations". 279-297. 2017.
  6. Seabra, José; Pedro, L. M.; Fernandes e Fernandes, J.; Sanches, J. Miguel. "Ultrasound Profile of Carotid Plaque: A New Approach Towards Stroke Prediction". In Multi-Modality Atherosclerosis Imaging and Diagnosis, 173-185. Springer New York, 2013.
    10.1007/978-1-4614-7425-8_14
  7. Ribeiro, Ricardo; Marinho, Rui Tato; Suri, Jasjit S.; Sanches, João Miguel; Ribeiro, R.; Marinho, R.T.; Suri, J.S.; et al. "Classification and Staging of Chronic Liver Disease Based on Ultrasound, Laboratorial, and Clinical Data". In Ultrasound Imaging, edited by Sanches, J. Miguel; Laine, Andrew F.; Suri, Jasjit S., 255-282. Springer US, 2011.
    10.1007/978-1-4614-1180-2_11
  8. R. Seabra, Jose C.; R. Sanches, Joao M.. "A 3D Graph-Cut based Algorithm for Evaluating Carotid Plaque Echogenicity and Texture". In Recent Advances in Biomedical Engineering. InTech, 2009.
    10.5772/7459
  9. Rodrigues, Isabel; Sanches, Joao. "Denoising of Fluorescence Confocal Microscopy Images with Photobleaching compensation in a Bayesian framework". In Recent Advances in Biomedical Engineering. InTech, 2009.
    10.5772/7477
Conference abstract
  1. Ferro, F.; Fernandes, Edgar C.; Sanches, Joao. "Detailed Analysis of Flame Chemiluminescence". Paper presented in SPEIC10: Towards Sustainable Combustion, Tenerife, 2010.
    Published
Conference paper
  1. Raposo, Afonso; Silva, Rafael; Rosário, Luís Brás; Sanches, João; da Silva, Hugo Plácido. "Smartphone Pulse Oximetry Using Two-tone Camera-based Photoplethysmography". 2023.
    10.1109/enbeng58165.2023.10175332
  2. Monteiro, Stéphanie; Sanches, João. "Study of the echogenic capacity of the materials". 2023.
    10.23919/cisti58278.2023.10211657
  3. Raposo, Afonso; da Silva, Hugo Placido; Sanches, Joao. "Camera-based Photoplethysmography (cbPPG) using smartphone rear and frontal cameras: an experimental study". 2021.
    10.1109/embc46164.2021.9630847
  4. Correia, J. Rafael; Miguel Sanches, J.; Mainardi, Luca. "Error perception classification in Brain-Computer Interfaces using CNN". 2021.
    10.1109/embc46164.2021.9631080
  5. Narotamo, Hemaxi; Sanches, J. Miguel; Silveira, Margarida. "Combining Deep Learning with Handcrafted Features for Cell Nuclei Segmentation *". 2020.
    10.1109/embc44109.2020.9175258
  6. Narotamo, Hemaxi; Fernandes, M. Sofia; Miguel Sanches, J.; Silveira, Margarida; Sanches, J. Miguel. "Interphase Cell Cycle Staging using Deep Learning *". 2020.
    10.1109/embc44109.2020.9175583
  7. Monteiro, S.; Sanches, J.. "Simulation in the Area of Anesthesia for Training of Health Professionals". 2019.
    10.34190/km.19.226
  8. Scinches, J. Miguel; Branco, M. P.; da Silva, F. Lopes. "Neuroactivation imaging using a monogenic framework". 2016.
    10.1109/isbi.2016.7493377
  9. Oliveira, TF; Ferreira, L; Sanches, J; Paiva, T. "An exploratory study of dissociated states during sleep in patients with fibromyalgia". Paris, 2012.
    Published
  10. Carreiras, C.; de Almeida, L. B.; Sanches, J. M.. "Phase-locking factor in a motor imagery brain-computer interface". 2012.
    10.1109/embc.2012.6346564
  11. Ribeiro, R.; Tato Marinho, R.; Sanches, J. M.. "Global and local detection of liver steatosis from ultrasound". 2012.
    10.1109/embc.2012.6347494
  12. Domingues, A.; Paiva, T.; Sanches, J. M.. "An actigraphy heterogeneous mixture model for sleep assessment". 2012.
    10.1109/embc.2012.6346416
  13. Khan, S.; DSouza, A.; Sanches, J.; Ventura, R.. "Geometric correction of deformed chromosomes for automatic Karyotyping". 2012.
    10.1109/embc.2012.6346951
  14. Afonso, D.; Seabra, J.; Suri, J. S.; Sanches, J. M.. "A CAD system for atherosclerotic plaque assessment". 2012.
    10.1109/embc.2012.6346104
  15. Torres, Pedro M. B.; Sanches, J. Miguel; Goncalves, Paulo J. S.; Martins, Jorge M. M.. "3D femur reconstruction using a robotized ultrasound probe". 2012.
    10.1109/biorob.2012.6290782
  16. T. Oliveira; C. Sitges; H. Alves; J. Sanches; T. Paiva; P. Montoya. "Sensorial and affective pain images: Is there dissociation in Fibromyalgia brain processing?". Paper presented in III International Symposium for the Study of Chronic Pain and Fibromyalgia, Palma de Mallorca, 2012.
  17. Acharya, U. R.; Faust, O.; Sree, S. V.; Alvin, A. P. C.; Krishnamurthi, G.; Seabra, J. C. R.; Sanches, J.; Suri, J. S.. "Atheromatic: Symptomatic vs. asymptomatic classification of carotid ultrasound plaque using a combination of HOS, DWT & texture". 2011.
    10.1109/iembs.2011.6091113
  18. Ribeiro, R.; Marinho, R. T.; Velosa, J.; Ramalho, F.; Sanches, J. M.; Suri, J. S.. "The usefulness of ultrasound in the classification of chronic liver disease". 2011.
    10.1109/iembs.2011.6091271
  19. R. Ribeiro; J.M. Sanches; J. Velosa; R. Ramalho; R.T. Marinho. "MELD correlation with physical features extracted from ultrasound liver images in liver cirrhosis". Paper presented in 13th World Congress of the World Federation for Ultrasound in Medicine and Biology (WFUMB 2011), Viena, 2011.
  20. Santos, Nuno; Sanches, Joao; Figueiredo, Patricia. "Spatial priors for perfusion and transit time estimation in PASL-MRI". 2011.
    10.1109/isbi.2011.5872524
  21. Ribeiro, Ricardo; Marinho, Rui; Velosa, Jose; Ramalho, Fernando; Sanches, J. Miguel. "Chronic liver disease staging classification based on ultrasound, clinical and laboratorial data". 2011.
    10.1109/isbi.2011.5872504
  22. Coito, Ana Luisa; Sanches, Joao. "Assessment of Obstructive Sleep Apnea Syndrome by spectral analysis of physiological parameters". 2011.
    10.1109/enbeng.2011.6026088
  23. Coito, Ana Luisa; Belo, David; Paiva, Teresa; Sanches, J. Miguel. "Topographic EEG brain mapping before, during and after Obstructive Sleep Apnea Episodes". 2011.
    10.1109/isbi.2011.5872770
  24. Maximiano, Ricardo; Sanches, Joao. "Temporal correlation compensation (whitening) of the fMRI data using Akaike Information Criterion". 2011.
    10.1109/enbeng.2011.6026085
  25. Gafaniz, Rita; Sanches, J. Miguel. "Neuronal electrical activity, energy consumption and mitochondrial ATP restoration dynamics: A physiological based model for FMRI". 2011.
    10.1109/isbi.2011.5872419
  26. Seabra, Jose´; Pedro, Lui´s Mendes; Fernandes e Fernandes, Jose´; Sanches, Joa~o. "Ultrasonographic characterization and identification of symptomatic carotid plaques". 2010.
    10.1109/iembs.2010.5627811
  27. Adamec, Ondrej; Domingues, Alexandre; Paiva, Teresa; Sanches, J Miguel. "Statistical characterization of actigraphy data during sleep and wakefulness states". 2010.
    10.1109/iembs.2010.5627774
  28. Rodrigues, Isabel; Sanches, J Miguel. "Denoising of LSFCM images with compensation for the photoblinking/photobleaching effects". 2010.
    10.1109/iembs.2010.5626159
  29. Sanches, J M; Pereira, B; Paiva, T. "Headset Bluetooth and cell phone based continuous central body temperature measurement system". 2010.
    10.1109/iembs.2010.5626172
  30. Ventura, Rodrigo; Khmelinskii, Artem; Sanches, J Miguel. "Classifier-assisted metric for chromosome pairing". 2010.
    10.1109/iembs.2010.5626237
  31. Domingues, A; Adamec, O; Paiva, T; Sanches, J M. "Automatic annotation of actigraphy data for Sleep disorders diagnosis purposes". 2010.
    10.1109/iembs.2010.5626207
  32. Gafaniz, R; Sanches, J M. "ATP consumption and neural electrical activity: A physiological model for brain imaging". 2010.
    10.1109/iembs.2010.5626524
  33. Rodrigues, Isabel; Sanches, Joao. "Photoblinking/photobleaching differential equation model for intensity decay of fluorescence microscopy images". 2010.
    10.1109/isbi.2010.5490226
  34. Seabra, Jose; Sanches, Joao; Ciompi, Franscesco; Radeva, Petia. "Ultrasonographic plaque characterization using a rayleigh mixture model". 2010.
    10.1109/isbi.2010.5490428
  35. Seabra, Jose C.; Sanches, Joao M.. "On estimating de-speckled and speckle components from B-mode ultrasound images". 2010.
    10.1109/isbi.2010.5490355
  36. Sanches, Joao; Sousa, Ines; Figueiredo, Patricia. "Bayesian fisher information criterion for sampling optimization in ASL-MRI". 2010.
    10.1109/isbi.2010.5490127
  37. Rodrigues, Isabel; Sanches, Joao. "Fluorescence microscopy imaging denoising with log-Euclidean priors and photobleaching compensation". 2009.
    10.1109/icip.2009.5414440
  38. Nascimento, Jacinto; Sanches, Joao. "Ultrasound imaging LV tracking with adaptive window size and automatic hyper-parameter estimation". 2008.
    10.1109/icip.2008.4711814
  39. Rodrigues, Isabel; Sanches, Joao; Bioucas-Dias, Jose. "Denoising of medical images corrupted by Poisson noise". 2008.
    10.1109/icip.2008.4712115
  40. Caldeira, Liliana; Silva, Isabela; Sanches, Joao. "Automatic liver tumor diagnosis with Dynamic-Contrast Enhanced MRI". 2008.
    10.1109/icip.2008.4712240
  41. Afonso, David M.; Sanches, Joao M.; Lauterbach, Martin H.. "FMRI brain activity and underlying hemodynamics estimation in a new Bayesian framework". 2008.
    10.1109/isbi.2008.4541231
  42. Caldeira, Liliana; Sanches, Joao. "Liver tumor assessment with DCE-MRI". 2008.
    10.1109/isbi.2008.4541118
  43. Figueiredo, Patricia; Sanches, Jodo. "Sampling strategy for perfusion quantification using PASL-MRI". 2008.
    10.1109/isbi.2008.4541061
  44. Sanches, Joao; Afonso, David; Bartnykas, Kestutis; Lauterbach, Martin H.. "Comparison of two different approaches for brain activity detection in fMRI: SPM-MAP and SPM-GLM". 2008.
    10.1109/isbi.2008.4541066
  45. Afonso, David; Sanches, Joao; Lauterbach, Martin H.. "Joint Bayesian detection of brain activated regions and local HRF estimation in functional MRI". 2008.
    10.1109/icassp.2008.4517640
  46. Seabra, Jose; Sanches, Joao; Seabra, J.; Sanches, J.. "Modeling log-compressed ultrasound images for radio frequency signal recovery". 2008.
    10.1109/iembs.2008.4649181
  47. Seabra, Jose; Xavier, Joao; Sanches, Joao; Seabra, J.; Xavier, J.; Sanches, J.. "Convex ultrasound image reconstruction with log-Euclidean priors". 2008.
    10.1109/iembs.2008.4649183
  48. Rodrigues, Isabel; Xavier, Joao; Sanches, Joao; Rodrigues, I.; Xavier, J.; Sanches, J.. "Fluorescence Confocal Microscopy Imaging denoising with photobleaching". 2008.
    10.1109/iembs.2008.4649633
  49. Nascimento, Jacinto; Sanches, Joao; Nascimento, J.; Sanches, J.. "Total variation with automatic hyper-parameter estimation". 2008.
    10.1109/iembs.2008.4649185
  50. Afonso, David; Sanches, Joao; Lauterbach, Martin H.. "Robust brain activation detection in functional MRI". 2008.
    10.1109/icip.2008.4712416
  51. Khmelinskii, Artem; Ventura, Rodrigo; Sanches, Joao. "Chromosome pairing for karyotyping purposes using mutual information". 2008.
    10.1109/isbi.2008.4541038
  52. Seabra, Jose; Sanches, Joao. "Modeling Log-Compressed Ultrasound Images for Radio Frequency Signal Recovery". 2008.
    10.1109/IEMBS.2008.4649181
  53. Khmelinskii, A.; Ventura, R.; Sanches, J.; Khmelinskii, Artem; Ventura, Rodrigo; Sanches, Joao. "Automatic chromosome pairing using mutual information". 2008.
    10.1109/iembs.2008.4649562
  54. Rodrigues, I.; Sanches, J.; Rodrigues, Isabel; Sanches, Joao. "Temporal 2D reconstruction of cell nucleus from fluorescence confocal microscopy images with anisotropic filtering". 2008.
    10.1109/iembs.2008.4649631
  55. Seabra, J.; Sanches, J.; Seabra, Jose; Sanches, Joao. "Three-dimensional labeling of vulnerable regions in carotid plaques using Graph-Cuts". 2008.
    10.1109/iembs.2008.4649872
  56. Coelho, J.; Sanches, J.; Lauterbach, M.H.; Coelho, Joana; Sanches, Joao; Lauterbach, Martin H.. "fMRI binary detection of brain activated regions with Graph-Cuts". 2008.
    10.1109/iembs.2008.4650189
  57. Seabra, J.C.; Sanches, J.M.; Pedro, L.M.; Fernandes, J.F. e. "Carotid Plaque 3D Compound Imaging and Echo-Morphology Analysis: a Bayesian Approach". 2007.
    10.1109/iembs.2007.4352402
  58. Afonso, David M.; Sanches, Joao M.; Lauterbach, Martin H.; Afonso, D.M.; Sanches, J.M.; Lauterbach, M.H.. "Neural physiological modeling towards a hemodynamic response function for fMRI". 2007.
    10.1109/iembs.2007.4352615
  59. Sanches, Joao M.; Nascimento, Jacinto C.; Marques, Jorge S.. "An Unified Framework for Bayesian Denoising for Several Medical and Biological Imaging modalities". 2007.
    10.1109/iembs.2007.4353788
  60. Sanches, J.M.; Nascimento, J.C.; Marques, J.S.. "An unified framework for Bayesian denoising for several medical and biological imaging Modalities". 2007.
    10.1109/IEMBS.2007.4353788
  61. Sanches, Joao; Marques, Jorge S.. "Image Reconstruction using the Benford Law". 2006.
    10.1109/icip.2006.312845
  62. Nascimento, Jacinto C.; Sanches, Joao M.; Marques, Jorge S.. "A Method for the Dynamic Analysis of the Heart Using a Lyapounov Based Denoising Algorithm". 2006.
    10.1109/iembs.2006.260183
  63. Sanches, J.; Bioucas-Dias, J.M.; Marques, J.S.. "Minimum total variation in 3D ultrasound reconstruction". 2005.
    10.1109/icip.2005.1530462
  64. J.M. Sanches; J.S. Marques. "A Fast MAP Algorithm Using High Order Gibbs Priors". 2005.
    10.1109/icassp.2005.1416043
  65. Nascimento, J.; Marques, J.S.; Sanches, J.. "Estimation of cardiac phases in echographic images using multiple models". 2003.
    10.1109/icip.2003.1246638
  66. Sanches, J; Margues, JS; Sanches, J.; Marques, J.S.. "A map IIR filter for 3D ultrasound". 2002.
    10.1109/icip.2002.1040111
  67. Sanches, JM; Marques, JS; Sanches, J.M.; Marques, J.S.. "3D reconstruction from log-comppressed Rayleigh images". 2001.
    10.1109/icip.2001.959024
  68. Sanches, J.M.; Marques, J.S.. "Alignment-by-reconstruction for 3D ultrasound imaging". 2000.
    10.1109/icpr.2000.903480
Conference poster
  1. Vieira, D. F.; Fernandes, Maria Sofia ; Ana Margarida Moreira; Figueiredo, Joana; Seruca, Raquel; Sanches, Joao. "A computational approach for cytoskeletal organization characterization". Paper presented in SPAOM2023 – Spanish Portuguese Meeting for Advanced Optical Microscopy, 2023.
  2. Vieira, D. F.; Fernandes, Maria Sofia; Ana Margarida Moreira; Figueiredo, Joana; Seruca, Raquel; Sanches, Joao. "Unraveling the cytoskeletal architecture of cancer cells: a novel computational approach". Paper presented in LARSyS Annual Meeting 2023, 2023.
  3. Fernandes, Maria Sofia; Figueiredo, J.; Vieira, D. F.; Sanches, Joao; Seruca, R.. "Unravelling new strategies for early detection of invasive cancer cells: a special focus on the nuclear and cytoskeletal architecture". Paper presented in AACR Annual Meeting 2023, 2023.
  4. Fernandes, Maria Sofia ; Figueiredo, J.; Melo, S.; Vieira, D. F.; Moreira, A. M.; Maia, A.; Sanches, Joao; Seruca, R.. "Unravelling new strategies for early detection of invasive cancer cells: a focus on the nuclear architecture dynamics". Paper presented in EACR 2022 Congress, 2022.
  5. Afonso Raposo; Francisco Melo; João Sanches; Hugo Plácido da Silva. "Low-cost pulse oximetry and infra-red temperature device for COVID-19 patients". Paper presented in RECPAD 2021, 2021.
  6. Diogo Ramalho; Vasco Duarte; Hugo Silva; Miguel Constante; J. Miguel Sanches. "Real-time head movement analysis in teleconsultation for depressive disorder assessment". Paper presented in RECPAD 2021, 2021.
  7. Afonso Raposo; António Azeitona; Manya Afonso; J. Miguel Sanches. "Ultrasound denoising using the pix2pix GAN". Paper presented in RECPAD 2021, 2021.
  8. Pedro Constantino; Hugo Plácido da Silva; Miguel Constante; J. Miguel Sanches. "Realtime pulse rate variability for remote autonomic assessment". Paper presented in RECPAD 2021, 2021.
  9. Melo S.; Figueiredo J.; Sanches J.M.; Seruca R.. "Unraveling the molecular and morphological features involved in basal extrusion of E-cadherin dysfunctional cells". Paper presented in 2nd PhDay I3S, 2020.
  10. H. Narotamo; M. S. Fernandes; A.M. Moreira; R. Seruca; M. Silveira; J.M. Sanches. "In situ cell cycle stage at single cell level within cell populations". Paper presented in EACR-AACR-ASPIC Conference: Tumor Microenvironment, Lisbon, Portugal, 2020.
  11. Pena L.; Perea J.; Melo S.; Mercadillo F.; Figueiredo J.; Sanches J.M.; Sánchez-Ruiz A; et al. "Identification and functional characterization of a CDH1 missense variant in three unrelated families with gastric cancer". 2017.
  12. Melo S.; Figueiredo J.; Gamet K.; Godwin T.; Seixas S.; Sanches J.M.; Guilford P.; Seruca R.. "A novel regulation mechanism underlying loss of E-cadherin expression in Hereditary Diffuse Gastric Cancer families". 2017.
  13. Pena L.; Perea J.; Melo S.; Mercadillo F.; Figueiredo J.; J.M. Sanches; Sánchez-Ruiz A; et al. "CDH1 missense variant disrupts N-glycosylation and promotes gastric cancer". Paper presented in European Human Genetics Conference (EHGC), Copenhagen, Denmark, 2017.
  14. Melo S.; Figueiredo J.; Sanches J. M.; Seruca R.. "Screening of cancer-causative E-cadherin missense mutations through the exploitation of morphological changes". Paper presented in BIOIMAGING 2016 - 5th Symposium in Applied Bioimaging, 2016.
  15. S. Fernandes; A. Ferro; P. Carneiro; R. Seruca; J.M. Sanches. "Quantum dot-based bioimaging to trace gastric cancer: a new approach to develop novel biomarker quantification tools". Paper presented in BIOIMAGING 2016 - 5th Symposium in Applied Bioimaging, 2016.
  16. M. Afonso; J.M.R. Sanches. "Outlier detection in ultrasound using blind inpainting". Paper presented in RECPAD 2015, 2015.
  17. T. Mestre; R. Seruca; J.M.R. Sanches. "Evaluation of cell adhesion status through quantitative analysis of DAPI staining fluorescence images". Paper presented in RECPAD 2015, 2015.
  18. Manya V. Afonso; J. Miguel Sanches. "Blind inpainting after Log transformation using total variation". Paper presented in RECPAD 2014, 2014.
  19. Cláudia Gomes; Raquel Seruca; J. Miguel Sanches. "Quantification from fluorescence images of irregular populations of cells". Paper presented in RECPAD 2014, 2014.
  20. Anabela Ferro; J. Miguel Sanches; Raquel Seruca. "Blue intensity matters for cell cycle profiling". Paper presented in 3rd Symposium in Applied Bioimaging, 2014.
  21. Sofia Esmenio; Joana Figueiredo; Raquel Seruca; J. Miguel Sanches. "Protein expression profiling in immunofluorescence microscopy". Paper presented in International Symposium in Applied Bioimaging from Molecule to Man, 2013.
  22. Mariana Branco; J. Miguel Sanches; Rodrigo Ventura. "Comparative study of two movement identification strategies on BCI motor task". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  23. Mariana Branco; Fernando Lopes Da Silva; J. Miguel Sanches. "EEG time-frequency analysis for ERD/ERS temporal pattern characterization on brain computer interface motor task". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  24. Martina Fonseca; Joana Figueiredo; Raquel Seruca; J. Miguel Sanches. "Fluorescence microscopy based classification of E-cadherin missense mutation pathogenicity". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  25. Anastasiya Strembitska; Alexandre Domingues; J. Miguel Sanches. "A mathematical model for the baroreflex physiology: model parameters measurement". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  26. Alexandre Domingues; J. Miguel Sanches; Teresa Paiva. "Automatic sleep parameter computation from activity and cardiovascular data". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  27. Manya Afonso; J. Miguel Sanches,. "Total variation denoising using a recursive and spatially adaptative filter". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  28. David Afonso; J. Miguel Sanches,. "Exploring monogenic decomposition in carotid atherosclerotic plaque characterization". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  29. João Coelho; David Afonso; J. Miguel Sanches. "Webcam based optical tracker for free-hand US". Paper presented in 19th edition of the Portuguese Conference on Pattern Recognition (RecPad2013), 2013.
  30. Teresa Paiva; J. Miguel Sanches. "Sleep parameter estimation from portable data". Paper presented in World Association of Sleep Medicine (WASM) and Spanish Sleep Society (SES), 2013.
  31. L. Ferreira; S. Rebocho; T. Oliveira; J. Sanches; T. Paiva. "Dissociated sleep states in fibromyalgia: prevalence and correlations". Paper presented in 5th World Congress on Sleep Medicine organized by the World Association of Sleep Medicine (WASM), 2013.
  32. Teodoro P. Trindade; João M. Sanches; Edgar C. Fernandes. "Digital Color Image Processing Technique Applied to Gas Combustion Diagnosis". Paper presented in 8th World Conference on Experimental Heat Transfer, Fluid Mechanics and Thermodynamics, 2013.
  33. Pedro M. B. Torres; J. Miguel Sanches; Paulo J. S. Gonçalves; Jorge M. M. Martins. "Robotic 3D ultrasound". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  34. Teodoro P. Trindade; Edgar C. Fernandes; João M. Sanches. "Color image processing as a monitoring tool in gas combustion systems". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  35. Manya V. Afonso; João M. R. Sanches. "A total variation based denoising algorithm for 3D ultrasound". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  36. Alexandre Domingues; Teresa Paiva; J. Miguel Sanches. "Actigraphy movement classification for sleep/wakefulness discrimination". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  37. Sofia Esménio; Joana Figueiredo; Raquel Seruca; J. Miguel Sanches. "E-cadherin spatial characterization with radial distribution profile for mutation detection". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  38. Anastasiya Stembitska; Alexandre Domingues; J. Miguel Sanches. "An incremental linear model for the dynamics of the sinoatrial node". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  39. Ricardo Ribeiro; Rui Tato Marinho; J. Miguel Sanches. "Ultrasound quantification of Steatosis in patients with chronic infection of hepatitis C virus". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  40. David Afonso; J. Miguel Sanches. "Detection of carotid plaque symptoms using ultrasound imaging". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  41. João Leal; David Afonso; J. Miguel Sanches. "Graphical criteria of ROC analysis for endarterectomy purposes". Paper presented in 18th edition of the Portuguese Conference on Pattern Recognition (RecPad2012), 2012.
  42. R. Ribeiro; J. M. Sanches; R. T. Marinho. "A software development for the correlation of quantifiable physical ultrasound parameters with MELD". 2012.
  43. Oliveira, T.F.; Ferreira, L.; Sanches, J.M.; Paiva T.. "Dissociated states during sleep in fibromyalgia and healthy controls". 2012.
  44. Isabel Rodrigues; J. Miguel Sanches. "Differential equation model for fading in fluorescence microscopy images". Paper presented in International Symposium in Applied Bioimaging bridging development and application, 2012.
  45. Isabel Rodrigues; J. Miguel Sanches. "A photobleaching/photoblinking analytical model for LSFCM imaging". Paper presented in XLVI Congress of the Portuguese Society for Microscopy, 2012.
  46. Alexandre Domingues; Teresa Paiva; J. Miguel Sanches. "Sleep and wakefulness activities: are they intrinsicslly different?". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  47. Carlos Carreiras; Luís Borges de Almeida; J. Miguel Sanches. "ERD/ERS event detection from phase desynchronization measurements in BCI". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  48. David Afonso; J. Miguel Sanches. "Probe velocity tracking in free-hand US without spatial locator". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  49. David Belo; J. Miguel Sanches. "Detection of relevant events in a biocontrol framework with BCI". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  50. João Leal; Mónica Oliveira; J. Miguel Sanches. "Analysis of cut-off criteria in ROC curve for endarterectomy decision making". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  51. Michel Canôvas; Alexandre Domingues; J. Miguel Sanches. "Real time HRV with smartphone". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  52. Ricardo Maximiano; J. Miguel Sanches. "Pharmacokinetic parameter estimation in DCE_MRI". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  53. Ricardo Ribeiro; Rui Tato Marinho; J. Miguel Sanches. "Objective measures from ultrasound images of cirrhotic livers for prediction of MELD score". Paper presented in 17th edition of the Portuguese Conference on Pattern Recognition (RecPad2011), 2011.
  54. R. Ribeiro; J.M. Sanches; J. Velosa; F. Ramalho; R.T. Marinho. "Correlation of MELD with the physical characteristics of hepatobiliary ultrasound in liver cirrhosis". Paper presented in Semana Digestiva 2011, 2011.
  55. R. Ribeiro; J.M. Sanches; J. Velosa; F. Ramalho; R.T. Marinho. "Relationship of physical characteristics of hepatobiliary ultrasound with liver reserve". Paper presented in 14th Annual Meeting of the Portuguese Association for the Study of the Liver (APEF 2011), 2011.
  56. Rita Gafaniz; J. Miguel Sanches. "Coupling neuronal electrical activity and ATP comsuption: a physiological model for brain imaging". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  57. J. G. Merícia; J. Miguel Sanches; E. C. Fernandes. "Application of tomographic image reconstruction and snake algorithm to recognize a wrinkled flame front". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  58. Ana Luísa Coito; David Belo; Teresa Paiva; J. Miguel Sanches. "EEG spectral power changes before, during and after obstructive sleep apneas". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  59. Isabel Rodrigues; J. Miguel Sanches. "Denoising of fluorescent confocal microscopy images affected by the photoblinking/photobleaching effects". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  60. Ricardo Maximiniano; J. Miguel Sanches. "Temporal correlation compensation (whitening) of the fMRI data". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  61. Alexandre Domingues; Ondrej Adamec; Teresa Paiva; J. Miguel Sanches. "Sleep detection from actigraphy data". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  62. Andreia Duarte; Teresa Paiva; J. Miguel Sanches. "Mobile acquisition platform for sleep assessment". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  63. David Belo; Ana Coito; Teresa Paiva; J. Miguel Sanches. "Brain mapping of a wavelet analyses of subjects with obstructive sleep apnea". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  64. F. Ferro; J. Sanches; E. C. Fernandes. "Flames spectrum deconvolution". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  65. Marco Leite; Alberto Leal; João Sanches; Patrícia Figueiredo. "Improved EEG-fMRI integration in epilepsy". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  66. Miguel Rodrigues; Patrícia Figueiredo; J. Miguel Sanches. "Bayesian perfusion estimation with PASL-MRI". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  67. Nuno Barros; J. Miguel Sanches. "Liver tumor classification based on DCE-MRI images". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  68. Ricardo Ribeiro; Rui Marinho (MD); J. Miguel Sanches. "Morphologic cirrhosis diagnosis from ultrasound". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  69. T.F.Oliveira; Teresa Paiva; J. Miguel Sanches. "Dissociated states in fibromyalgia". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  70. José Seabra; J. Miguel Sanches. "A rayleigh mixture approach for modelling ultrasound plaque morphology". Paper presented in 16th edition of the Portuguese Conference on Pattern Recognition (RecPad2010), 2010.
  71. Artem Khmelinskii; Rodrigo Ventura; João Sanches. "Chromosome pairing using mutual information in bone marrow cells". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  72. David Afonso; João Sanches. "ARMA estimation - a comparison study for fMRI". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  73. F. Ferro; J. Sanches; E. C. Fernandes. "Flames spectrum estimation based on Gaussian Mixtures: a Bayesian approach". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  74. Isabel Rodrigues; João Sanches. "Denoising of fluorescence confocal image sequences: a comparison study". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  75. Isabel Rodrigues; João Sanches. "Photobleaching and photoblinking model describing intensity fading in LSFCM". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  76. Inês Sousa; João Sanches; Patrícia Figueiredo. "Optimizing sampling strategies for perfusion quantification using PASL". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  77. Juliane Farthouat; João Sanches; Patrícia Figueiredo. "Bayesian estimation of perfusion using PASL-MRI". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  78. José Seabra; João Sanches. "Usefulness of ultrasonic speckle decomposition procedure for tissue characterization". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  79. José Seabra; João Sanches. "Toward the development of a web ultrasonic plaque analysis (WUPA) tool". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  80. João Sanches. "Automatic diagnosis of liver steatosis by ultrasound using autoregressive tissue characterization". Paper presented in 15th edition of the Portuguese Conference on Pattern Recognition (RecPad2009), 2009.
  81. Isabela Silva; João Sanches; Ana G. Almeida. "Alignment-by-reconstruction in cardiac MRI". Paper presented in 14th edition of the Portuguese Conference on Pattern Recognition (RecPad2008), 2008.
  82. Isabel Rodrigues; João Sanches,. "Fluorescence confocal imaging noise removal: a bayesian approach". Paper presented in 14th edition of the Portuguese Conference on Pattern Recognition (RecPad2008), 2008.
  83. José Santos; João Sanches; Silva Carvalho. "Automatic nervous system control model of the blood pressure and heart rate physiological variables". Paper presented in 14th edition of the Portuguese Conference on Pattern Recognition (RecPad2008), 2008.
  84. Joana Coelho; João Sanches; Martin H. Lauterbach (MD). "fMRI binary detection". Paper presented in 14th edition of the Portuguese Conference on Pattern Recognition (RecPad2008), 2008.
  85. Ricardo Ribeiro; José Seabra; João Sanches. "Fatty liver automatic diagnosis from ultrasound images". Paper presented in 14th edition of the Portuguese Conference on Pattern Recognition (RecPad2008), 2008.
  86. José Seabra; João Sanches. "Labeling of the echo-morphology of atherosclerotic plaques using graph-cuts". Paper presented in 14th edition of the Portuguese Conference on Pattern Recognition (RecPad2008), 2008.
  87. Pedro Pires; João Sanches; Teresa Paiva. "Activity characterization from actimetry sensor data for sleep disorders diagnosis". Paper presented in Workshop Physics of Biological Systems: From Genes to Societies, 2008.
  88. Mariana S. C. Almeida; João Sanches. "Blind adaptative deblurring of chromosome images". Paper presented in First Portuguese Forum on Computational Biology (FPBC 2008), 2008.
  89. Artem Khmelinskii; Rodrigo Ventura; Carmo-Fonseca M.; João Sanches. "Automatic pairing of metaphase chromosomes with mutual information for karyotyping purposes". Paper presented in First Portuguese Forum on Computational Biology (FPBC 2008), 2008.
  90. Isabel Rodrigues; João Sanches. "Spatio-temporal 3D reconstruction from fluorescent microscopy images with anisotropic filtering". Paper presented in First Portuguese Forum on Computational Biology (FPBC 2008), 2008.
  91. Isabel Rodrigues; João Sanches. "Cell nucleus GFP flow analysis from sequences of LSCFM images". Paper presented in 1st Workshop on Computational Engineering: Fluid Dynamics (CFD 2008), 2008.
  92. João M. Sanches; David Afonso; Kestutis Bartnykas; Martin H. Lauterbach (MD). "Robust bayesian detection of brain activated regions with functional MRI". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  93. David M. Afonso; João M. Sanches; Martin H. Lauterbach (MD). "Physiologically based hemodynamic model of neural tissues". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  94. José C. Seabra; João M. Sanches; L. Mendes Pedro. "Joint 3D reconstruction and segmentation of carotid arteries and plaques from US image sequences". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  95. José C. Seabra; João M. Sanches. "Engineering a 3D ultrasound robotic system". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  96. Filipa Ferro; Edgar C. Fernandes; Teodoro Trindade; João M. Sanches. "Chemical species and chemical transitions estimation from laminar premixed flame spectrum and applications". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  97. Liliana L. Caldeira; João Sanches; F. Lopes da Silva (MD). "Optimization of mutual information based registration for DCE-MRI liver perfusion analysis". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  98. Liliana L. Caldeira; João Sanches; F. Lopes da Silva (MD). "Malignancy liver tumor assessment with perfusin quantification from DCE-MRI". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  99. Artem Khmelinskii; Rodrigo Ventura; João Sanches. "Chromosome pairing for karyotyping purposes". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  100. Jacinto C. Nascimento; João M. Sanches; Jorge S. Marques. "Tracking of the left ventricle using a lyapounov based denoising algorithm". Paper presented in 13th edition of the Portuguese Conference on Pattern Recognition (RecPad2007), 2007.
  101. Sanches J.; Marques J.S.. "A recursive filter for 3D MAP reconstruction". Paper presented in 12th edition of the Portuguese Conference on Pattern Recognition (RecPad2002), 2002.
  102. Sanches J.; Marques J.S.. "A retrieval algorithm for log-compressed ultrasound images". Paper presented in 11th edition of the Portuguese Conference on Pattern Recognition (RecPad2000), 2000.
  103. Sanches J.; Marques J.S.. "3D reconstruction of medical objects from ultrasound images: a bayesian algorithm". Paper presented in Workshop on Medical Imaging, 1999.
Edited book
  1. Fluorescence Imaging and Biological Quantification, Ed.. CRC Press. 2017.
    Published • Editor
  2. Multi-Modality Atherosclerosis Imaging and Diagnosis. Springer New York. 2014.
    Published • 10.1007/978-1-4614-7425-8 • Editor
  3. Sanches, Joao. Pattern Recognition and Image Analysis. Springer Berlin Heidelberg. 2013.
    10.1007/978-3-642-38628-2 • Editor
Journal article
  1. Vieira, Diogo Fróis; Raposo, Afonso; Azeitona, António; Afonso, Manya; Pedro, Luís Mendes; Sanches, J.. "Ultrasound Despeckling with GANs and Cross Modality Transfer Learning". IEEE Access (2024): 1-1. http://dx.doi.org/10.1109/access.2024.3381630.
    10.1109/access.2024.3381630
  2. Ramalho, Diogo; Constantino, Pedro; Silva, Hugo Placido Da; Constante, Miguel; Sanches, Joao. "An Augmented Teleconsultation Platform for Depressive Disorders". IEEE Access 10 (2022): 130563-130571. http://dx.doi.org/10.1109/access.2022.3228324.
    10.1109/access.2022.3228324
  3. Afonso Raposo; Luis Marques; Rafael Correia; Francisco Melo; João Valente; Telmo Pereira; Luis Brás Rosário; et al. "e-CoVig: A Novel mHealth System for Remote Monitoring of Symptoms in COVID-19". Sensors 21 10 (2021): 3397-3397. https://doi.org/10.3390/s21103397.
    10.3390/s21103397
  4. Narotamo, Hemaxi; Fernandes, Maria Sofia; Moreira, Ana Margarida; Melo, Soraia; Seruca, Raquel; Silveira, Margarida; Sanches, Joao Miguel. "A machine learning approach for single cell interphase cell cycle staging". Scientific Reports (2021): https://publons.com/publon/50610455/.
    10.1038/S41598-021-98489-5
  5. Parreira, Maria Teresa; Lavrenyuk, Kirill; Sanches, Joao M.; Dahl, Kris Noel. "A single stiffened nucleus alters cell dynamics and coherence in a monolayer". Cytoskeleton (2021): https://publons.com/publon/41760481/.
    10.1002/CM.21660
  6. Suri, Jasjit S.; Agarwal, Sushant; Gupta, Suneet K.; Puvvula, Anudeep; Biswas, Mainak; Saba, Luca; Bit, Arindam; et al. "A narrative review on characterization of acute respiratory distress syndrome in COVID-19-infected lungs using artificial intelligence". Computers in Biology and Medicine (2021): https://publons.com/publon/39988262/.
    10.1016/J.COMPBIOMED.2021.104210
  7. Saba, Luca; Sanagala, Skandha S.; Gupta, Suneet K.; Koppula, Vijaya K.; Laird, John R.; Viswanathan, Vijay; Sanches, Miguel J.; et al. "A Multicenter Study on Carotid Ultrasound Plaque Tissue Characterization and Classification Using Six Deep Artificial Intelligence Models: A Stroke Application". IEEE Transactions on Instrumentation and Measurement 70 (2021): 1-12. http://dx.doi.org/10.1109/tim.2021.3052577.
    10.1109/tim.2021.3052577
  8. Giovanni Corso; Giacomo Montagna; Figueiredo J; Carlo La Vecchia; Uberto Fumagalli Romario; Maria Sofia Fernandes; Susana Seixas; et al. "Hereditary Gastric and Breast Cancer Syndromes Related to CDH1 Germline Mutation: A Multidisciplinary Clinical Review". Cancers (2020): https://www.mdpi.com/2072-6694/12/6/1598.
    10.3390/cancers12061598
  9. Blair, Vanessa R.; McLeod, Maybelle; Carneiro, Fatima; Coit, Daniel G.; D'Addario, Johanna L.; van Dieren, Jolanda M.; Harris, Kirsty L.; et al. "Hereditary diffuse gastric cancer: updated clinical practice guidelines". The Lancet Oncology (2020): https://publons.com/publon/34889202/.
    10.1016/S1470-2045(20)30219-9
  10. Suri, Jasjit S.; Puvvula, Anudeep; Majhail, Misha; Biswas, Mainak; Jamthikar, Ankush D.; Saba, Luca; Faa, Gavino; et al. "Integration of cardiovascular risk assessment with COVID-19 using artificial intelligence". Reviews in Cardiovascular Medicine (2020): https://publons.com/publon/36747230/.
    10.31083/J.RCM.2020.04.236
  11. Suri, Jasjit S.; Puvvula, Anudeep; Biswas, Mainak; Majhail, Misha; Saba, Luca; Faa, Gavino; Singh, Inder M.; et al. "COVID-19 pathways for brain and heart injury in comorbidity patients: A role of medical imaging and artificial intelligence-based COVID severity classification: A review". Computers in Biology and Medicine (2020): https://publons.com/publon/34101391/.
    10.1016/J.COMPBIOMED.2020.103960
  12. Saba, L.; Tiwari, A.; Biswas, M.; Gupta, S.K.; Godia-Cuadrado, E.; Chaturvedi, A.; Turk, M.; et al. "Wilson's disease: A new perspective review on its genetics, diagnosis and treatment". Frontiers in Bioscience - Elite 11 1 (2019): 166-185. http://www.scopus.com/inward/record.url?eid=2-s2.0-85067282516&partnerID=MN8TOARS.
    10.2741/E854
  13. Biswas, M.; Kuppili, V.; Saba, L.; Edla, D.R.; Suri, H.S.; Cuadrado-Godia, E.; Laird, J.R.; et al. "State-of-the-art review on deep learning in medical imaging". Frontiers in Bioscience - Landmark 24 3 (2019): 392-426. http://www.scopus.com/inward/record.url?eid=2-s2.0-85057139668&partnerID=MN8TOARS.
    10.2741/4725
  14. Carlos J. C. Rodrigues; João M. Sanches; Carla C. C. R. de Carvalho. "Determining transaminase activity in bacterial libraries by time-lapse imaging". Chemical Communications 55 90 (2019): 13538-13541. https://doi.org/10.1039/C9CC07507K.
    10.1039/C9CC07507K
  15. Pena-Couso, L.; Perea, J.; Melo, S.; Mercadillo, F.; Figueiredo, J.; Sanches, J.M.; Sánchez-Ruiz, A.; et al. "Clinical and functional characterization of the CDH1 germline variant c.1679C>G in three unrelated families with hereditary diffuse gastric cancer". European Journal of Human Genetics 26 9 (2018): 1348-1353. http://www.scopus.com/inward/record.url?eid=2-s2.0-85046998829&partnerID=MN8TOARS.
    10.1038/s41431-018-0173-8
  16. Ribeiro, A.S.; Nobre, A.R.; Mendes, N.; Almeida, J.; Vieira, A.F.; Sousa, B.; Carvalho, F.A.; et al. "SRC inhibition prevents P-cadherin mediated signaling and function in basal-like breast cancer cells". Cell communication and signaling : CCS 16 1 (2018): 75-75. http://www.scopus.com/inward/record.url?eid=2-s2.0-85056432555&partnerID=MN8TOARS.
    10.1186/s12964-018-0286-2
  17. Figueiredo, J.; Melo, S.; Gamet, K.; Godwin, T.; Seixas, S.; Sanches, J.M.; Guilford, P.; Seruca, R.. "E-cadherin signal sequence disruption: A novel mechanism underlying hereditary cancer". Molecular Cancer 17 1 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85051027654&partnerID=MN8TOARS.
    10.1186/s12943-018-0859-0
  18. Figueiredo, J.; Rodrigues, I.; Ribeiro, J.; Fernandes, M.S.; Melo, S.; Sousa, B.; Paredes, J.; Seruca, R.; Sanches, J.M.. "Geometric compensation applied to image analysis of cell populations with morphological variability: A new role for a classical concept". Scientific Reports 8 1 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85049644419&partnerID=MN8TOARS.
    10.1038/s41598-018-28570-z
  19. Kuppili, V.; Biswas, M.; Sreekumar, A.; Suri, H.S.; Saba, L.; Edla, D.R.; Marinho, R.T.; Sanches, J.M.; Suri, J.S.. "Author Correction to: Extreme Learning Machine Framework for Risk Stratification of Fatty Liver Disease Using Ultrasound Tissue Characterization (J Med Syst, (2017), 41, 152, 10.1007/s10916-017-0797-1)". Journal of Medical Systems 42 1 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85037626014&partnerID=MN8TOARS.
    10.1007/s10916-017-0862-9
  20. Biswas, M.; Kuppili, V.; Edla, D.R.; Suri, H.S.; Saba, L.; Marinhoe, R.T.; Sanches, J.M.; Suri, J.S.. "Symtosis: A liver ultrasound tissue characterization and risk stratification in optimized deep learning paradigm". Computer Methods and Programs in Biomedicine 155 (2018): 165-177. http://www.scopus.com/inward/record.url?eid=2-s2.0-85038880889&partnerID=MN8TOARS.
    10.1016/j.cmpb.2017.12.016
  21. Afonso, Manya; Miguel Sanches, Joao. "Adaptive Order Non-Convex Lp-norm Regularization in Image Restoration". Journal of Physics: Conference Series 904 (2017): 012016. http://dx.doi.org/10.1088/1742-6596/904/1/012016.
    10.1088/1742-6596/904/1/012016
  22. Ferro, A.; Mestre, T.; Carneiro, P.; Sahumbaiev, I.; Seruca, R.; Sanches, J.M.. "Blue intensity matters for cell cycle profiling in fluorescence DAPI-stained images". Laboratory Investigation 97 5 (2017): 615-625. http://www.scopus.com/inward/record.url?eid=2-s2.0-85019626964&partnerID=MN8TOARS.
    10.1038/labinvest.2017.13
  23. Melo, S.; Figueiredo, J.; Fernandes, M.S.; Gonçalves, M.; Morais-De-Sá, E.; Sanches, J.M.; Seruca, R.. "Predicting the functional impact of CDH1 missense mutations in hereditary diffuse gastric cancer". International Journal of Molecular Sciences 18 12 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85038807279&partnerID=MN8TOARS.
    10.3390/ijms18122687
  24. Kuppili, V.; Biswas, M.; Sreekumar, A.; Suri, H.S.; Saba, L.; Edla, D.R.; Marinhoe, R.T.; Sanches, J.M.; Suri, J.S.. "Extreme Learning Machine Framework for Risk Stratification of Fatty Liver Disease Using Ultrasound Tissue Characterization". Journal of Medical Systems 41 10 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85028048475&partnerID=MN8TOARS.
    10.1007/s10916-017-0797-1
  25. Mestre, Tânia; Figueiredo, Joana; Ribeiro, Ana Sofia; Paredes, Joana; Seruca, Raquel; Sanches, João Miguel. "Erratum: Corrigendum: Quantification of topological features in cell meshes to explore E-cadherin dysfunction". Scientific Reports 6 1 (2016): http://dx.doi.org/10.1038/srep30222.
    10.1038/srep30222
  26. Ribeiro, A.S.; Carvalho, F.A.; Figueiredo, J.; Carvalho, R.; Mestre, T.; Monteiro, J.; Guedes, A.F.; et al. "Atomic force microscopy and graph analysis to study the P-cadherin/SFK mechanotransduction signalling in breast cancer cells". Nanoscale 8 46 (2016): 19390-19401. http://www.scopus.com/inward/record.url?eid=2-s2.0-84998881935&partnerID=MN8TOARS.
    10.1039/c6nr04465d
  27. Saba, L.; Dey, N.; Ashour, A.S.; Samanta, S.; Nath, S.S.; Chakraborty, S.; Sanches, J.; et al. "Automated stratification of liver disease in ultrasound: An online accurate feature classification paradigm". Computer Methods and Programs in Biomedicine 130 (2016): 118-134. http://www.scopus.com/inward/record.url?eid=2-s2.0-84963685616&partnerID=MN8TOARS.
    10.1016/j.cmpb.2016.03.016
  28. Carvalho, S.; Catarino, T.A.; Dias, A.M.; Kato, M.; Almeida, A.; Hessling, B.; Figueiredo, J.; et al. "Preventing E-cadherin aberrant N-glycosylation at Asn-554 improves its critical function in gastric cancer". Oncogene 35 13 (2016): 1619-1631. http://www.scopus.com/inward/record.url?eid=2-s2.0-84937605601&partnerID=MN8TOARS.
    10.1038/onc.2015.225
  29. Sousa, S.A.; Leitão, J.H.; Martins, R.C.; Sanches, J.M.; Suri, J.S.; Giorgetti, A.. "Bioinformatics Applications in Life Sciences and Technologies". BioMed Research International 2016 (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-84971287200&partnerID=MN8TOARS.
    10.1155/2016/3603827
  30. Mestre, Tania; Figueiredo, Joana; Ribeiro, Ana Sofia; Paredes, Joana; Seruca, Raquel; Sanches, Joao Miguel; Mestre, T.; et al. "Quantification of topological features in cell meshes to explore E-cadherin dysfunction (vol 6, 25101, 2016)". Scientific Reports 6 (2016): https://publons.com/publon/29977452/.
    10.1038/SREP30222
  31. Micó, L.; Sanches, J.M.; Cardoso, J.S.. "The vitality of pattern recognition and image analysis". Neurocomputing 150 PA (2015): 124-125. http://www.scopus.com/inward/record.url?eid=2-s2.0-84912530934&partnerID=MN8TOARS.
    10.1016/j.neucom.2014.09.056
  32. Afonso, M.; Sanches, J.M.. "Image reconstruction under multiplicative speckle noise using total variation". Neurocomputing Part A (2015): 200-213. http://www.scopus.com/inward/record.url?eid=2-s2.0-84912077722&partnerID=MN8TOARS.
    10.1016/j.neucom.2014.08.073
  33. Sanches, J.M.; Figueiredo, J.; Fonseca, M.; Durães, C.; Melo, S.; Esménio, S.; Seruca, R.. "Quantification of mutant E-cadherin using bioimaging analysis of in situ fluorescence microscopy. A new approach to CDH1 missense variants". European Journal of Human Genetics 23 8 (2015): 1072-1079. http://www.scopus.com/inward/record.url?eid=2-s2.0-84937515858&partnerID=MN8TOARS.
    10.1038/ejhg.2014.240
  34. Afonso, D.; Seabra, J.; Pedro, L.M.; Fernandes E Fernandes, J.; Sanches, J.M.. "An Ultrasonographic Risk Score for Detecting Symptomatic Carotid Atherosclerotic Plaques". IEEE Journal of Biomedical and Health Informatics 19 4 (2015): 1505-1513. http://www.scopus.com/inward/record.url?eid=2-s2.0-84938152715&partnerID=MN8TOARS.
    10.1109/JBHI.2014.2359236
  35. Afonso, M.V.; Sanches, J.M.R.. "Blind Inpainting Using l0 and Total Variation Regularization". IEEE Transactions on Image Processing 24 7 (2015): 2239-2253. http://www.scopus.com/inward/record.url?eid=2-s2.0-84928341397&partnerID=MN8TOARS.
    10.1109/TIP.2015.2417505
  36. Afonso, M.V.; Sanches, J.M.R.. "A total variation recursive space-variant filter for image denoising". Digital Signal Processing: A Review Journal 40 1 (2015): 101-116. http://www.scopus.com/inward/record.url?eid=2-s2.0-84933673154&partnerID=MN8TOARS.
    10.1016/j.dsp.2015.02.002
  37. Vegas-Sánchez-Ferrero, G.; Seabra, J.; Rodriguez-Leor, O.; Serrano-Vida, A.; Aja-Fernáaez, S.; Palencia, C.; Martín-Fernández, M.; Sanches, J.. "Gamma mixture classifier for plaque detection in intravascular ultrasonic images". IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control 61 1 (2014): 44-61. http://www.scopus.com/inward/record.url?eid=2-s2.0-84892405548&partnerID=MN8TOARS.
    10.1109/TUFFC.2014.6689775
  38. Domingues, A.; Paiva, T.; Sanches, J.M.. "Sleep and wakefulness state detection in nocturnal actigraphy based on movement information". IEEE Transactions on Biomedical Engineering 61 2 (2014): 426-434. http://www.scopus.com/inward/record.url?eid=2-s2.0-84893259379&partnerID=MN8TOARS.
    10.1109/TBME.2013.2280538
  39. Ribeiro, R.T.; Marinho, R.T.; Sanches, J.M.. "An ultrasound-based computer-aided diagnosis tool for steatosis detection". IEEE Journal of Biomedical and Health Informatics 18 4 (2014): 1397-1403. http://www.scopus.com/inward/record.url?eid=2-s2.0-84904169281&partnerID=MN8TOARS.
    10.1109/JBHI.2013.2284785
  40. Domingues, A.; Paiva, T.; Sanches, J.M.. "Hypnogram and sleep parameter computation from activity and cardiovascular data". IEEE Transactions on Biomedical Engineering 61 6 (2014): 1711-1719. http://www.scopus.com/inward/record.url?eid=2-s2.0-84901274648&partnerID=MN8TOARS.
    10.1109/TBME.2014.2301462
  41. Pedro, L.M.; Sanches, J.M.; Seabra, J.; Suri, J.S.; Fernandes E Fernandes, J.. "Asymptomatic carotid disease - A new tool for assessing neurological risk". Echocardiography 31 3 (2014): 353-361. http://www.scopus.com/inward/record.url?eid=2-s2.0-84895918292&partnerID=MN8TOARS.
    10.1111/echo.12348
  42. Vegas-Sanchez-Ferrero, Gonzalo; Seabra, Jose; Rodriguez-Leor, Oriol; Serrano-Vida, Angel; Aja-Fernandez, Santiago; Palencia, Cesar; Martin-Fernandez, Marcos; Sanches, Joao. "Gamma Mixture Classifier for Plaque Detection in Intravascular Ultrasonic Images". IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control (2014): https://publons.com/publon/8509694/.
    10.1109/TUFFC.2014.2878
  43. Ribeiro, R.T.; Marinho, R.T.; Miguel Sanches, J.. "Classification and staging of chronic liver disease from multimodal data". IEEE Transactions on Biomedical Engineering 60 5 (2013): 1336-1344. http://www.scopus.com/inward/record.url?eid=2-s2.0-84876767963&partnerID=MN8TOARS.
    10.1109/TBME.2012.2235438
  44. Acharya, U.R.; Faust, O.; S., V.S.; Alvin, A.P.C.; Krishnamurthi, G.; Seabra, J.C.R.; Sanches, J.; Suri, J.S.. "Understanding symptomatology of atherosclerotic plaque by image-based tissue characterization". Computer Methods and Programs in Biomedicine 110 1 (2013): 66-75. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875110774&partnerID=MN8TOARS.
    10.1016/j.cmpb.2012.09.008
  45. Rajendra Acharya, U.; Rama Krishnan, M.M.; Vinitha Sree, S.; Sanches, J.; Shafique, S.; Nicolaides, A.; Pedro, L.M.; Suri, J.S.. "Plaque tissue characterization and classification in ultrasound carotid scans: A paradigm for vascular feature amalgamation". IEEE Transactions on Instrumentation and Measurement 62 2 (2013): 392-400. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872060956&partnerID=MN8TOARS.
    10.1109/TIM.2012.2217651
  46. Sanches, J.M.; Rodrigues, I.. "Photobleaching/photoblinking differential equation model for fluorescence microscopy imaging". Microscopy and Microanalysis 19 5 (2013): 1110-1121. http://www.scopus.com/inward/record.url?eid=2-s2.0-84884558314&partnerID=MN8TOARS.
    10.1017/S143192761300189X
  47. Acharya, U.R.; Mookiah, M.R.K.; Vinitha Sree, S.; Afonso, D.; Sanches, J.; Shafique, S.; Nicolaides, A.; et al. "Atherosclerotic plaque tissue characterization in 2D ultrasound longitudinal carotid scans for automated classification: A paradigm for stroke risk assessment". Medical and Biological Engineering and Computing 51 5 (2013): 513-523. http://www.scopus.com/inward/record.url?eid=2-s2.0-84885619871&partnerID=MN8TOARS.
    10.1007/s11517-012-1019-0
  48. Hernández Tejera, M.; Sanches, J.M.; Vitrià, J.. "Selected papers from iberian conference on pattern recognition and image analysis". Pattern Recognition 45 9 (2012): http://www.scopus.com/inward/record.url?eid=2-s2.0-84861646191&partnerID=MN8TOARS.
    10.1016/j.patcog.2012.04.005
  49. Acharya, U.R.; Sree, S.V.; Ribeiro, R.; Krishnamurthi, G.; Marinho, R.T.; Sanches, J.; Suri, J.S.. "Data mining framework for fatty liver disease classification in ultrasound: A hybrid feature extraction paradigm". Medical Physics 39 7 (2012): 4255-4264. http://www.scopus.com/inward/record.url?eid=2-s2.0-84864261107&partnerID=MN8TOARS.
    10.1118/1.4725759
  50. Khan, S.; DSouza, A.; Sanches, J.; Ventura, R.. "Geometric correction of deformed chromosomes for automatic Karyotyping.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2012 (2012): 4438-4441. http://www.scopus.com/inward/record.url?eid=2-s2.0-84880943386&partnerID=MN8TOARS.
  51. Ribeiro, R.; Tato Marinho, R.; Sanches, J.M.. "Global and local detection of liver steatosis from ultrasound.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2012 (2012): 6547-6550. http://www.scopus.com/inward/record.url?eid=2-s2.0-84884174589&partnerID=MN8TOARS.
  52. Carreiras, C.; Borges de Almeida, L.; Sanches, J.M.. "Phase-locking factor in a motor imagery Brain-Computer Interface.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2012 (2012): 2877-2880. http://www.scopus.com/inward/record.url?eid=2-s2.0-84883020090&partnerID=MN8TOARS.
  53. Domingues, A.; Paiva, T.; Sanches, J.M.. "An actigraphy heterogeneous mixture model for sleep assessment.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2012 (2012): 2275-2278. http://www.scopus.com/inward/record.url?eid=2-s2.0-84880927931&partnerID=MN8TOARS.
  54. Afonso, D.; Seabra, J.; Suri, J.S.; Sanches, J.M.. "A CAD system for atherosclerotic plaque assessment.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2012 (2012): 1008-1011. http://www.scopus.com/inward/record.url?eid=2-s2.0-84881037164&partnerID=MN8TOARS.
  55. Seabra, J C; Ciompi, F; Pujol, O; Mauri, J; Radeva, P; Sanches, J. "Rayleigh Mixture Model for Plaque Characterization in Intravascular Ultrasound". IEEE Transactions on Biomedical Engineering 58 5 (2011): 1314-1324. http://dx.doi.org/10.1109/tbme.2011.2106498.
    10.1109/tbme.2011.2106498
  56. Sousa, I.; Santos, N.; Sanches, J.; Vilela, P.; Figueiredo, P.. "Challenges for non-invasive brain perfusion quantification using arterial spin labeling". Neuroradiology Journal 24 1 (2011): 77-83. http://www.scopus.com/inward/record.url?eid=2-s2.0-79956322332&partnerID=MN8TOARS.
  57. Santos, N.; Sanches, J.M.; Sousa, I.; Figueiredo, P.. "Optimal sampling and estimation in PASL perfusion imaging". IEEE Transactions on Biomedical Engineering 58 11 (2011): 3165-3174. http://www.scopus.com/inward/record.url?eid=2-s2.0-80054873816&partnerID=MN8TOARS.
    10.1109/TBME.2011.2164916
  58. Rodrigues, I.C.; Sanches, J.M.R.. "Convex total variation denoising of poisson fluorescence confocal images with anisotropic filtering". IEEE Transactions on Image Processing 20 1 (2011): 146-160. http://www.scopus.com/inward/record.url?eid=2-s2.0-79551559589&partnerID=MN8TOARS.
    10.1109/TIP.2010.2055879
  59. Sousa, I.; Santos, N.; Sanches, J.; Vilela, P.; Figueiredo, P.. "Challenges for Non-Invasive Brain Perfusion Quantification Using Arterial Spin Labeling". The Neuroradiology Journal (2011): https://publons.com/publon/10910661/.
    10.1177/197140091102400112
  60. Acharya, U.R.; Faust, O.; Sree, S.V.; Alvin, A.P.; Krishnamurthi, G.; Seabra, J.C.; Sanches, J.; Suri, J.S.. "Atheromatic™: symptomatic vs. asymptomatic classification of carotid ultrasound plaque using a combination of HOS, DWT & texture.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011 (2011): 4489-4492. http://www.scopus.com/inward/record.url?eid=2-s2.0-84863598878&partnerID=MN8TOARS.
  61. Ribeiro, R.; Marinho, R.T.; Velosa, J.; Ramalho, F.; Sanches, J.M.; Suri, J.S.. "The usefulness of ultrasound in the classification of chronic liver disease.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2011 (2011): 5132-5135. http://www.scopus.com/inward/record.url?eid=2-s2.0-84862299829&partnerID=MN8TOARS.
  62. Khan, S.; Sanches, J.; Ventura, R.. "Robust band profile extraction using constrained nonparametric machine-learning technique". IEEE Transactions on Biomedical Engineering 57 10 PART 2 (2010): 2587-2591. http://www.scopus.com/inward/record.url?eid=2-s2.0-77956913178&partnerID=MN8TOARS.
    10.1109/TBME.2010.2060196
  63. Silva, I.; Almeida, A.G.; Sanches, J.. "Automatic cropping for LV segmentation in cardiac MRI". International Journal of Tomography and Statistics 13 W10 (2010): 60-71. http://www.scopus.com/inward/record.url?eid=2-s2.0-77955990172&partnerID=MN8TOARS.
  64. Khmelinskii, A.; Ventura, R.; Sanches, J.. "A novel metric for bone marrow cells chromosome pairing". IEEE Transactions on Biomedical Engineering 57 6 (2010): 1420-1429. http://www.scopus.com/inward/record.url?eid=2-s2.0-77952569051&partnerID=MN8TOARS.
    10.1109/TBME.2010.2040279
  65. Adamec, O.; Domingues, A.; Paiva, T.; Sanches, J.M.. "Statistical characterization of actigraphy data during sleep and wakefulness states.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 2342-2345. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903876982&partnerID=MN8TOARS.
  66. Domingues, A.; Adamec, O.; Paiva, T.; Sanches, J.M.. "Automatic annotation of actigraphy data for sleep disorders diagnosis purposes.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 5081-5084. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903871568&partnerID=MN8TOARS.
  67. Seabra, J.; Pedro, L.M.; Fernandes E Fernandes, J.; Sanches, J.. "Ultrasonographic characterization and identification of symptomatic carotid plaques.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 6110-6113. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903867231&partnerID=MN8TOARS.
  68. Gafaniz, R.; Sanches, J.. "ATP consumption and neural electrical activity: a physiological model for brain imaging.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 5480-5483. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903854289&partnerID=MN8TOARS.
  69. Sanches, J.M.; Pereira, B.; Paiva, T.. "Headset Bluetooth and cell phone based continuous central body temperature measurement system.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 2975-2978. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903855969&partnerID=MN8TOARS.
  70. Santos, N.; Sanches, J.; Figueiredo, P.; Santos, N; Sanches, J; Figueiredo, P; Nuno Santos; J. Miguel Sanches; Patrícia Figueiredo. "Bayesian optimization of perfusion and transit time estimation in PASL-MRI.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 4284-4287. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903864895&partnerID=MN8TOARS.
    10.1109/iembs.2010.5626174
  71. Ventura, R.; Khmelinskii, A.; Sanches, J.. "Classifier-assisted metric for chromosome pairing.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 6729-6732. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903876549&partnerID=MN8TOARS.
  72. Rodrigues, I.; Sanches, J.. "Denoising of LSFCM images with compensation for the photoblinking/photobleaching effects.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2010): 4292-4295. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903859187&partnerID=MN8TOARS.
  73. Seabra, J.C.R.; Pedro, L.M.; E Fernandes, J.F.; Sanches, J.M.. "A 3-D ultrasound-based framework to characterize the echo morphology of carotid plaques". IEEE Transactions on Biomedical Engineering 56 5 (2009): 1442-1453. http://www.scopus.com/inward/record.url?eid=2-s2.0-67649224720&partnerID=MN8TOARS.
    10.1109/TBME.2009.2013964
  74. J. Seabra; L. M. Pedro; J. Sanches; F. Viola; A. C. Dinis; J. Mendanha; P. Brogueira; M. T. Peña. "Investigação no ensino de engenharia biomédica: dois casos de estudo". (2008): 7-19. http://hdl.handle.net/10400.21/70.
    Published
  75. Sanches, J.M.; Nascimento, J.C.; Marques, J.S.. "Medical image noise reduction using the Sylvester-Lyapunov equation". IEEE Transactions on Image Processing 17 9 (2008): 1522-1539. http://www.scopus.com/inward/record.url?eid=2-s2.0-50849115225&partnerID=MN8TOARS.
    10.1109/TIP.2008.2001398
  76. Coelho, J.; Sanches, J.; Lauterbach, M.H.. "fMRI binary detection of brain activated regions with graph-cuts.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 4411-4414. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903863820&partnerID=MN8TOARS.
  77. Seabra, J.; Sanches, J.. "Modeling log-compressed ultrasound images for radio frequency signal recovery.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 426-429. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903861737&partnerID=MN8TOARS.
  78. Seabra, J.; Xavier, J.; Sanches, J.. "Convex ultrasound image reconstruction with log-Euclidean priors.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 435-438. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903872923&partnerID=MN8TOARS.
  79. Rodrigues, I.; Xavier, J.; Sanches, J.. "Fluorescence Confocal Microscopy imaging denoising with photobleaching.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 2205-2208. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903857773&partnerID=MN8TOARS.
  80. Rodrigues, I.; Sanches, J.. "Temporal 2D reconstruction of cell nucleus from Fluorescence Confocal Microscopy images with anisotropic filtering.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 2197-2200. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903872187&partnerID=MN8TOARS.
  81. Seabra, J.; Sanches, J.. "Three-dimensional labeling of vulnerable regions in carotid plaques using Graph-Cuts.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 3150-3153. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903871357&partnerID=MN8TOARS.
  82. Khmelinskii, A.; Ventura, R.; Sanches, J.. "Automatic chromosome pairing using mutual information.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 1918-1921. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903868964&partnerID=MN8TOARS.
  83. Nascimento, J.; Sanches, J.. "Total variation with automatic hyper-parameter estimation.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2008): 443-446. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903877048&partnerID=MN8TOARS.
  84. J. Seabra; J. Sanches; L. M. Pedro. "Reconstrução tridimensional da placa de ateroma da bifurcação carotídea, angiologia e cirurgia vascular". (2007):
    Published
  85. Nascimento, Jacinto C.; Sanches, Joao M.; Marques, Jorge S.; Nascimento, J.C.; Sanches, J.M.; Marques, J.S.. "Tracking the left ventricle in ultrasound images based on total variation denoising". Lecture Notes in Computer Science 4478 LNCS (2007): https://publons.com/publon/8391753/.
    10.1007/978-3-540-72849-8_79
  86. Seabra, J.C.; Sanches, J.M.; Pedro, L.M.; e Fernandes, J.F.. "Carotid plaque 3D compound imaging and echo-morphology analysis: a Bayesian approach.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2007): 763-766. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903860443&partnerID=MN8TOARS.
  87. Afonso, D.M.; Sanches, J.M.; Lauterbach, M.H.. "Neural physiological modeling towards a hemodynamic response function for fMRI.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2007): 1615-1618. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903865564&partnerID=MN8TOARS.
  88. Sanches, J.M.; Nascimento, J.C.; Marques, J.S.. "An unified framework for Bayesian denoising for several medical and biological imaging modalities.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2007): 6268-6271. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903871268&partnerID=MN8TOARS.
  89. Sanches, Joao M.; Marques, Jorge S.; Sanches, J.M.; Marques, J.S.. "Image denoising using the Lyapunov equation from non-uniform samples". Lecture Notes in Computer Science 4141 LNCS (2006): https://publons.com/publon/8391750/.
    10.1007/11867586_33
  90. Nascimento, J.C.; Sanches, J.M.; Marques, J.S.. "A method for the dynamic analysis of the heart using a Lyapounov based denoising algorithm.". Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference (2006): 4828-4831. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903876424&partnerID=MN8TOARS.
  91. Sanches, JM; Marques, JS. "MAP signal reconstruction with non regular grids". Lecture Notes in Computer Science (2004): https://publons.com/publon/8391721/.
    10.1007/978-3-540-30125-7_26
  92. Sanches, J.M.; Marques, J.S.. "Joint image registration and volume reconstruction for 3D ultrasound". Pattern Recognition Letters 24 4-5 (2003): 791-800. http://www.scopus.com/inward/record.url?eid=2-s2.0-0037290176&partnerID=MN8TOARS.
    10.1016/S0167-8655(02)00182-4
  93. Sanches, J.M.; Marques, J.S.. "Compensation of log-compressed images for 3-D ultrasound". Ultrasound in Medicine and Biology 29 2 (2003): 239-253. http://www.scopus.com/inward/record.url?eid=2-s2.0-0037298591&partnerID=MN8TOARS.
    10.1016/S0301-5629(02)00710-X
  94. Sanches, J.M.; Marques, J.S.. "A multiscale algorithm for three-dimensional free-hand ultrasound". Ultrasound in Medicine and Biology 28 8 (2002): 1029-1040. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036706627&partnerID=MN8TOARS.
    10.1016/S0301-5629(02)00548-3
  95. Sanches, JM; Marques, JS; Sanches, J.M.; Marques, J.S.. "A Rayleigh reconstruction/interpolation algorithm for 3D ultrasound". Pattern Recognition Letters 21 10 (2000): 917-926. https://publons.com/publon/8391771/.
    10.1016/S0167-8655(00)00053-2
Preface / Postscript
  1. Seruca, R.; Suri, J.S.; Sanches, J.M.. "Fluorescence Imaging and Biological Quantification". Preface to Fluorescence Imaging and Biological Quantification. CRC Press. 2017.
    Published
  2. Saba, L.; Sanches, J.M.; Pedro, L.M.; Suri, J.S.. "Multi-Modality Atherosclerosis Imaging and Diagnosis". Preface to Multi-Modality Atherosclerosis Imaging and Diagnosis. 2013.
    Published
  3. Vitrià, J.; Sanches, J.M.; Hernández, M.. "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)". Proceedings. 2011.

Intellectual property

Patent
  1. 2021. "System for the determination of biomedical signals and respective method of operation". Portugal.
    Pending
  2. 2009. "Methodology for recording events in an electronic diary, implemented on a mobile phone, to aid in the diagnosis of sleep disorders". Portugal.
    Granted/Issued
  3. 2009. "Core temperature monitoring system for diagnosis of sleep disorders". Portugal.
    Granted/Issued

Other

Invention
  1. Experimental prototype - Levitation Sphere. 2021.
  2. Bioimaging tool to recognise aberrant protein expression profiles that is currently included in the pipeline to uncover the functional relevance of genetic variants identified in disease contexts.. 2018.
  3. Experimental prototype - Sphere in the gutter. 1997.
  4. Experimental prototype - Sphere in the gutter controller. 1997.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2021/11 Physics of Ultrasounds Master in Cardiovascular Imaging, Faculty of Medicine University of Lisbon
(Lisboa, Portugal)
2021/10/27 E-Mental Health in Mood Anxiety Disorders / Tecnological Tools in Psychiatry
2019/12/13 Molecular and Cellular quantification from imaging
(Milão, Italy)
2018/05/11 A novel regulation mechanism underlying loss of E-cadherin expression in Hereditary Diffuse Gastric Cancer families
(Lisboa, Portugal)
2017/06/30 E-cadherin missense mutations as model to identify therapeutic targets in HDGC
(Porto, Portugal)
2016/11 E-cadherin, much more than an adhesion molecule Cancer-causing CDH1 missense mutations as a model system”
(Sevilha, Spain)
2016/06/02 Image Reconstruction is like looking for needles in haystacks
Universidade de Lisboa (Lisboa, Portugal)
2016/03/07 Biomedical imaging and signal processing
(Porto, Portugal)
2014/10/16 Biological Quantification from Imaging 3rd Symposium in Applied Bioimaging (Bioimaging 2014)
(Porto, Portugal)
2014/06/04 Methods for quantification of protein expression in fluorescence imaging
Institute Pasteur (Paris, France)
2014/04/25 Biological modeling and quantification from fluorescence imaging
Department of Mathematics, Imperial College London (Londres, United Kingdom)
2014/03/19 Unclassified CDH1 sequence variants in functional terms?
(Netherlands)
2013/10 Expression profiles of wild-type and mutant E-cadherin during cell-cycle International Symposium in Applied Bioimaging from Molecule to Man
(Porto, Portugal)
2013/10 Quantitation of E-cadherin protein expression as a means to predict its function International Symposium in Applied Bioimaging from Molecule to Man
(Porto, Portugal)
2013/09/18 Unclassified sequence variants in functional terms? E­cadherin gene (CDH1) as model
(Lisboa, Portugal)
2012/12 Biological modeling and quantification from fluorescence microscopy imaging
Department of Bioengineering Seminar, IST (Lisboa, Portugal)
2012/09/21 Characterization of E-Cadherin Distribution from Fluorescence Images
(Porto, Portugal)
2012/09/20 An exploratory study of dissociated states during sleep in patients with fibromyalgia
(Paris, France)
2012/02 Brain computer interface (BCI) for medical Bio/Neuro feedback applications XIII Conference on Electrotechnical and Telecommunications Engineering
Higher School of Technology Polytechnic Institute of Castelo Branco (Castelo Branco, Portugal)
2011/04 Autonomic Nervous System assessment with Heart Rate Variability (HRV) for biofeedback applications
Faculdade de Ciências da Universidade de Lisboa
2010/11 Tissue Characterization by Image Analysis for Diagnostic Purposes Workshop of the Integrated Biomedical Engineering (Master course and Biomedical Engineering doctoral program )
Universidade do Porto, Faculdade de Engenharia (Porto, Portugal)
2010/09/15 Cell Phone based Sleep electronic Diary (SeD)
(Lisboa, Portugal)
2010/09/14 Actigraphy Data Classification during Sleep and Wakefulness States
(Lisboa, Portugal)
2010/09/14 A Mixture Distribution Model to describe Actigraphy Data during Sleep and Wakefulness States
(Lisboa, Portugal)
2010/09/14 Cell Phone based Continuous Tympanic Temperature Measurement
(Lisboa, Portugal)
2010/06/06 Parameter free Bayesian activity detection on fMRI
(Barcelona, Spain)
2009/10/22 Sampling strategy for perfusion quantification using PASL 26th Annual Scientific Meeting of the ESMRMB
(Antalaia, Turkey)
2009/07/23 Tissue Characterization by Image Analysis for Diagnostic Purposes Meeting with science in Portugal
Fundação Calouste Gulbenkian (Lisboa, Portugal)
2009/06/18 A Binary Detection Approach for fMRI
(São Francisco, Califórnia, United States)
2008/10 Signal processing of Laser Scanning Confocal Fluorescence Microscopy Images
Instituto Superior Técnico, Lisboa (Lisboa, Portugal)
2006/06 3D reconstruction from non-parallel cross-sections with misalignment errors and observations corrupted by multiplicative noise
(France)
2005/11 Medical Imaging and 3D Reconstruction 1st Industrial Engineering Conferences
Castelo Branco Polytechnic Institute (Castelo Branco, Portugal)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2022 - Current Diagnosis and Technological-based diagnosis follow-up in Psychiatry
Supervisor
 Biomedical Engineering (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2021/01/01 - Current Mobile-Cloud Platform for eHealth in Cardiology
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020/01/01 - Current Brachial Plexus Blockade Simulator
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020/01/01 - Current Characterization of coronary artery disease from SPECT imaging
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020 - 2021/11/26 Augmented reality by videoconferencing in Psychiatry
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020 - 2021/10/21 Haptic feedback BCI system for stroke rehabilitation
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020 - 2021/09 Real-time pulse rate variability via remote photoplethysmography
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020 - 2021/07 Technological Tools to Aid in the Diagnosis of Depression
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020 - 2021 An image-to-image translation approach for speckle noise reduction in US
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018 - 2021 Diagnose cancer-causative E-cadherin missense mutations through molecular and morphological changes involved in cell extrusion
Co-supervisor
 Biomedicina (PhD)
Universidade do Porto Faculdade de Medicina, Portugal
2019 - 2020/10 Deep Learning techniques for Cell stage Classification
Co-supervisor
 Engenharia Aeroespacial (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2019 - 2020/01/14 Automatic remote surveillance system of vital symptoms for COVID-19
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2019 - 2020/01/12 Error perception classification in Brain-Computer interfaces using Convolutional Neural Networks
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2019 - 2020 Impact of dysfunctional cell adhesion molecules in nuclear features
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2019 - 2020 Dynamic characterization of carotid atherosclerotic plaque from ultrasound information
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018 - 2019/10 Deep Learning Based Cell Nuclei Segmentation: An Application for Cell Cycle Staging
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018 - 2019/10 Depression Assessment Based on Technology using Smartphone Data
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018 - 2019/10 A dynamical approach to modelling visuomotor activity
Supervisor
 Engenharia Biomédica
Universidade de Lisboa Instituto Superior Técnico, Portugal
2017 - 2018/09 Identification of Biomarkers for Deep Brain Stimulation using Electroencephalography and Diffusion Weighted Imaging
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2016 - 2017 Tracing gastric cancer using quantitative bioimaging analysis
Co-supervisor
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal

Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 - 2017 Uncover the role of cell cycle in E-cadherin expression and function . Any link with protein control quality mechanisms? A biochemical and bioimaging study
Co-supervisor
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal

Universidade de Lisboa Instituto Superior Técnico, Portugal
2013 - 2017 Atherosclerotic Plaque Characterization, Classification and Reconstruction with Ultrasound Imaging
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2015 - 2016/12/05 Continuous Time Neural Signal Processing in Embedded Platforms
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2015 - 2016/11/22 Single-cell quantification of the expression of plasma membrane MDR transporter Tpo3 from fluorescence imaging in Saccharomyces Cerevisiae
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 - 2015/12/09 Computational analysis of mitochondrial morphology and membrane potential
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 - 2015/11/25 Continuous time quantification of attention from sparse and limited reaction responses randomly acquired in time
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2014 - 2015/11/16 Cell cycle staging from DAPI fluorescence microscopy
Supervisor
 Bioengenharia e Nanossistemas (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 - 2015/10/16 Biological Quantification of Proteins in Heterogeneous Cell Populations
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2014 - 2015/10/02 A Mobile Application for Psychological Assessment
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2014 - 2015/09/18 Mathematical modeling of the circadian clock in oncogene induced senescence
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Charité Universitätsmedizin Berlin, Germany
2014 - 2015/06/29 WebCam based optical tracker for free-hand ultrasound
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2014 - 2015/06/17 Cell Adhesion and Nuclear Morphology Analysis from DAPI Staining Fluorescence Microscopy Images
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
2014 - 2015/03/18 Characterization and detection of epileptic seizures based on actigraphy data
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2012 - 2015 Compressed Sensing in Medical Imaging
Supervisor
Universidade de Lisboa Instituto Superior Técnico, Portugal
2010 - 2015 Machine Learning and Stochastic Modelling Approaches for Biomedical Signal Analysis
Co-supervisor
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidad de Valladolid, Spain
2010 - 2014/09 Ambulatory sleep assessment from behavioural and physiological data
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2012 - 2013/11/22 Predicting E-cadherin Missense Mutation Pathogenicity through Fluorescence Microscopy
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
2012 - 2013/11/19 Monogenic-based Synchronization Maps for a Brain-Computer Interface Motor Paradigm
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2012 - 2013/11/18 Decision Support Tool for Choosing the Appropriate Treatment for Patients with Carotid Atherosclerosis
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2012 - 2013/06/26 E-cadherin mutations cell cycle dynamics and morphology
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
2010 - 2013 Probabilistic Models for Tissue Characterization in Ultrasound and Magnetic Resonance Medical Images and Applications
Co-supervisor
Universidad de Valladolid, Spain
2009 - 2013 Computer-aided diagnosis in chronic liver disease based on ultrasound imaging
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2011 - 2012/07/08 Molecular distribution characterization with geometric invariant profiles in fluorescence microscopy
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2008 - 2011/05 Cell nucleus reconstruction and analysis of laser scanning fluorescence confocal microscopy (LSFCM) images
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2008 - 2011/05 Medical Ultrasound B-Mode Modeling, De-speckling and Tissue Characterization
Supervisor
 Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2010 - 2011 Adaptive ROC analysis in Carotid Atherosclerosis Diagnosis for Endarterectomy
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2010 - 2011 HRV in Smartphone for Biofeedback Applications
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2010 - 2011 Brain Computer Interface (BCI) in the Motor Imaging Paradigm
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2010 - 2011 Holter System for Contiguous Electrocardiogram Acquisition and Processing via cell phone
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2009 - 2010 Liver Tumor Classification based on DCE-MRI Images
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2009 - 2010 A Bayesian approach to perfusion imaging using ASL MRI
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2009 - 2010 Chromosome Identification and Pairing in optical microscopy images
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2009 - 2010 Mobile Acquisition Platform for Sleep Assessment
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2009 - 2010 Assessment of Obstructive Sleep Apnea Syndrome by Spectral Analysis of Physiological Parameters
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2008 - 2009 Energy Metabolism and Neuronal Activity: a Physiologically-Based Linear Model for Brain Imaging
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2008 - 2009 Temporal Correlation Compensation (whitening) of the fMRI data
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2008 - 2009 fMRI Sparse Design for Auditive paradigms: Toward a Signal and Stimulus Perception Improvements
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2008 - 2009 Internet-based robotic microscopy
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2008 Acquisition of Physiological Signals - Application to the control of a mobile platform from EOG
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2008 Robotized Microscopy
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2008 Continuous monitoring and automatic detection of cardiac anomalies by mobile phone
Supervisor
 Engenharia Electrotécnica e de Computadores (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2008 Biomedical signal acquisition system based on a cell phone - Application in estimating core temperature to determine the circadian sleep cycle
Supervisor
 Engenharia Electrónica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2008 Toward a fully automatic left ventricle segmentation using cine-MR images
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2007 - 2008 Autonomic Nervous System Control Model
Co-supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2007 - 2008 Joint Detection-Estimation of Brain Activity in fMRI using Graph Cuts
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2007 - 2008 Activity Characterization from Actimetry Sensor Data for Sleep Disorders Diagnosis
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2006 - 2007 Brain functional assessment with fMRI: joint Bayesian activity detection and hemodynamic response estimation in brain function
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2006 - 2007 Liver Tumor Assessment with DCE-MRI
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2006 - 2007 Chromosomes pairing for kayotyping purposes
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal
2005 - 2006 3D Echographic Reconstruction and Diagnosis of Atherosclerotic Lesion
Supervisor
 Engenharia Biomédica (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Medicina, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2016/10/26 - 2016/10/28 Bioimaging 2016 - 5th Symposium in Applied Bioimaging (2016/10/26 - 2016/10/28)
Symposium (Member of the Organising Committee)
2015/11/05 - 2015/11/08 Bioimaging 2015- 4th International Symposium in Applied Bioimagong (2015/11/05 - 2015/11/08)
Symposium (Member of the Organising Committee)
2005/06/07 - 2005/06/09 2nd Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA) (2005/06/07 - 2005/06/09)
Conference (Member of the Organising Committee)

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2013/11/01 - 2013/11/01 Chair of the National Conference (RecPad 2013)
Conference
 RecPad 2013, - 19th edition of the Portuguese Conference on Pattern Recognition
2013/06/05 - 2013/06/07 Chair of the international conference Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
Conference
 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
2011/06/08 - 2011/06/10 Co-chair of the international conference Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
Conference
 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2022/01/11 Novel architectures to integrate ultra sensitive sensors to detect biomedical signals
(Thesis) Arguer
 Marília Dias Silva (PhD)
Instituto de Engenharia de Sistemas e Computadores, Portugal
2021/11/30 Gaze Analysis in Robotic Therapy for Autistic Children
(Thesis) Arguer
 Bárbara Silva (Master)
2021/07/02 Biophotonics Signal Analysis for Biomarker Discovery in Bio-Fluids
(Thesis) Arguer
 Beatriz Isabel Jacinto Barros (Master)
Universidade do Porto Faculdade de Engenharia, Portugal
2021/03/18 Computational Methods for Medical Image Registration
(Thesis) Arguer
 Mia Carmela Mojica (PhD)
2021/02/01 Stroke Rehabilitation Therapy for the Upper Extremity with a Virtual Coach for Compensation Reduction
(Thesis) Arguer
 Ana Rita Mendes Cóias (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2021/01/22 Accuracy Evaluation in Robot-Assisted and Ultrasound-Guided Neurosurgery
(Thesis) Arguer
 Pedro Veigas dos Santos (Master)
2021/01/18 Imputation Techiques for Clinical Data of Ischemic Stroke Patients
(Thesis) Arguer
 Filipa Matos Marques (Master)
2020/07/10 CNN classification of immune cells in tumor sections
(Thesis) Arguer
 André Pereira (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2020/01/24 The neurobehavioral correlates of social exploration in naturalist setting in normal and autistic subjects, a clinical informatics approach
(Thesis) Arguer
 Marco Simões (PhD)
2019/12/20 Intelligent Lab on Fiber tools for sensing single-cells and extracellular nano-vesicles
(Thesis) Arguer
 Joana Paiva (PhD)
Universidade do Porto Faculdade de Engenharia, Portugal

Universidade do Porto Faculdade de Ciências, Portugal
2019/12/03 Optical Neurostimulation Spine Endoprosthesis
(Thesis) Arguer
 Ricardo Morgado Marques (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
2019/11/26 Electrodermal Activity Sensor (EDA) with Adaptive Gain Control
(Thesis) Arguer
 António Banganho (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2019/11/21 Binge-watching Data Analysis Tool
(Thesis) Arguer
 José Cordeiro (Master)
2019/09/24 Development of Algorithms for Detection and Quantification of Rheumatic Diseases in Musculoskeletal Ultrasound
(Thesis) Arguer
 Nelson Martins (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2019/04/04 Voxel-based dosimetry using multimodal images for patient-specific liver radioembolization with yttrium-90 charged glass microspheres
(Thesis) Arguer
 Paulo Miguel dos Santos Ferreira (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018/11/29 Implementation of an algorithm for estimating free-water fraction in Diffusion-Weighted Magnetic Resonance Imaging
(Thesis) Arguer
 Marc Golub (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018/11/13 Speech as a Biomarker for Sleep Disorders and Sleep Deprivation
(Thesis) Arguer
 Maria Catarina Tavares Botelho (Master)
2018/10/26 Controlo em Sistemas de Interação Humano-Máquina
(Thesis) Arguer
 Rui Manuel Carvalho dos Santos de Azevedo Antunes (PhD)
Universidade NOVA de Lisboa Faculdade de Ciências e Tecnologia, Portugal
2018/07/05 Characterizing the Cyclists’ Path
(Thesis) Arguer
 Filipa Oliveira (Master)
2018/06/26 Diagnosis of Rheumatic Heart Disease Based on Echocardiography Videos
(Thesis) Arguer
 Malik Saad Sultan (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2018/06/19 Toward a 3D Planning Approach for Breast Conserving Surgery
(Thesis) Arguer
 Hooshiar Zolfagharnasab (PhD)
Universidade do Porto Faculdade de Engenharia, Portugal
2017/11/30 Kinematic Data Filtering with Unscented Kalman Filter
(Thesis) Arguer
 Manuel João Duarte Serejo Goulão (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2017/11/28 TRUS-MR Image Registration for Prostatic Brachytherapy Robotic Intervention
(Thesis) Arguer
 Raquel Patrícia de Oliveira Rocha (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Universidade de Lisboa Faculdade de Ciências, Portugal
2017/05/22 Video-Based Risk Assessment for Cyclists
(Thesis) Arguer
 MIguel Nobre da Costa (Master)
2017/05/16 Embedded Systems in the Aid of People with Motor Disabilities
(Thesis) Arguer
 Maria Margarida Dias dos Reis (Master)
2017/05/08 In vivo automatic cataract detection and classification using the ultrasound technique
(Thesis) Arguer
 Luís Miguel da Luz Caixinha Duarte (PhD)
Universidade de Coimbra, Portugal
2017/03/17 Study of the spatiotemporal dynamics of epileptics activity using simultaneous EEG-fMRI Rodolfo Abreu (PhD)
2016/11/25 Modulation of the fMRI signal by respiratory activity
(Thesis) Arguer
 Rui José Pereira Bastos (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2016/11/23 Detection of sleep position by means of a wrist-worn sensor technology
(Thesis) Arguer
 Ricardo Trindade (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2016/11/10 Lag correction for Cone-Beam CT
(Thesis) Arguer
 Sara Filipa Pereira Rosas (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2016/11/10 Lag correction for Cone-Beam CT
(Thesis) Arguer
 Sara Filipa Pereira Rosas (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2016/06/17 Cell mobility and morphology joint analysis in Biology assays
(Thesis) Arguer
 Tiago Esteves (PhD)
Universidade do Porto Faculdade de Engenharia, Portugal
2016/05/16 Automated System for Identification of Circulating Tumor Cells
(Thesis) Arguer
 Rita Gon¸calves Pires Antunes Ang´elico (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2015/12/09 Overcoming automatic response tendencies: behavioral findings and computational model-based analysis
(Thesis) Arguer
 Tiago Alexandre Delgado Henriques (Master)
2015/12/01 Transfer Function Design for Three-Dimensional Medical Images Using Sketches
(Thesis) Arguer
 Ana Rita Monteiro Mendes (Master)
2015/12/01 Novel Spatial Interaction Techniques for Exploring 3D Medical Images
(Thesis) Arguer
 Pedro Duarte de Figueiredo Parreira (Master)
2015/11/26 Identification of landmines in thermal infrared images
(Thesis) Arguer
 Jorge Leitão Pimenta (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Academia Militar, Portugal
2015/11/24 OptoPAD: dissecting the neuronal control of Drosophila eating habits by merging the flyPAD with optogenetics
(Thesis) Arguer
 Jos´e Maria da Silva Moreira (Master)
Centro Champalimaud, Portugal

Universidade de Lisboa Instituto Superior Técnico, Portugal
2015/11/12 Image Fusion to detect camouflaged people
(Thesis) Arguer
 Nádia Bento (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Academia Militar, Portugal
2015/11/12 Automatic classification of green zones for mapping purposes
(Thesis) Arguer
 Joel Dias (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal

Academia Militar, Portugal
2015/10/29 Non invasive quantitative imaging of brain perfusion in hypocapnia by ASL MRI
(Thesis) Arguer
 Gonçalo Filipe Almeida Gomes (Master)
2015/09/25 Chemiluminescence Spectral Identity of Premixed Methane and Propane Flames
(Thesis) Arguer
 Teodoro Trindade (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2015/06/30 Automatic Heart Sound Analysis for Cardiovascular Disease Assessment
(Thesis) Arguer
 Dinesh Kumar (PhD)
Universidade de Coimbra, Portugal
2015/04/13 Robust Surface Reconstruction and US Bone Registration for Hip Resurfacing Surgery
(Thesis) Arguer
 Pedro Daniel Dias Teodoro (PhD)
2015/02/10 Lossless compression algorithms for microarray images and whole genome alignments
(Thesis) Arguer
 Luís Miguel de Oliveira Matos (PhD)
Universidade de Aveiro, Portugal
2015/01/16 Ultrasound Based Navigation and Control for Orthopaedic Robot Surgery
(Thesis) Arguer
 Pedro Miguel Baptista Torres (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2014/12/10 Robot assisted needle interventions for brain surgery
(Thesis) Arguer
 Tiago Miguel Sousa Salgueiro (Master)
2014/12/05 Implementation of a 3D TRUS acquisition system for robotized focal biopsies of the prostate, An approach using 3D integrated US transducers
(Thesis) Arguer
 João Daniel Marques Ramalhinho (Master)
2014/12/03 A behavioral investigation of the algorithm underlying reinforcement learning in human
(Thesis) Arguer
 Ana Catarina dos Santos Farinha (Master)
Universidade de Lisboa Faculdade de Medicina, Portugal
2014/11/21 Discrimination between Cars and Buildings in Military Environment
(Thesis) Arguer
 Jorge David Monteiro Leitão (Master)
Academia Militar, Portugal

Universidade de Lisboa Instituto Superior Técnico, Portugal
2014/11/21 Classification of Vegetation Cover in Military Environment
(Thesis) Arguer
 Miguel Filipe Santos Gonçalves (Master)
Academia Militar, Portugal

Universidade de Lisboa Instituto Superior Técnico, Portugal
2014/11/18 Detecting Conversion of Mild Cognitive Impairment to Alzeheimer
(Thesis) Arguer
 Maria Inês Barbosa Silva Crujo Uva (Master)
2014/11/11 Digital Communications Module for ISTnanosat
(Thesis) Arguer
 André Massano Matias (Master)
2014/07/14 Mechanistic characterization of reinforcement learning in healthy humans using computational models
(Thesis) Arguer
 Ângelo Rodrigo Neto Dias (Master)
Universidade de Lisboa Faculdade de Medicina, Portugal
2014/06/13 Looking at the second heart sound:A multi-facet study
(Thesis) Arguer
 Fabio de Lima Hedayioglu (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2014/06/02 Biomechanical Analysis of subjects after surgical repair of the Achilles tendon
(Thesis) Arguer
 Marisa Isabel Clemente da Silva (Master)
2014/03/31 Kalman filter methods for real-time signal processing in tokomak fusion research
(Thesis) Arguer
 Diogo Alves (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2014/03/12 Personalized pseudophakic model
(Thesis) Arguer
 Filomena Ribeiro (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2013/11/25 Advanced Heartbeat Classification Models for Reliable Electrocardiogram Analysis in Ambulatory Health Monitoring
(Thesis) Arguer
 Can Ye (PhD)
Carnegie Mellon University, United States
2013/11/18 Decision Support Tool for Choosing the Appropriate Treatment for Patients with Carotid Atherosclerosis
(Thesis) Arguer
 Alexandra Patrícia Lopes Machado (Master)
2013/09/23 Development of quantitative methods for functional magnetic resonance imaging
(Thesis) Arguer
 Inês Nunes de Sousa (PhD)
2013/04/12 Automatic Diagnosis of Melanoma from Dermoscopy Images using Texture, Color and Dermoscopic Structure Analysis
(Thesis) Arguer
 Luís Frazão (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2013/03/15 Probablistic Models for Tissue Characterization in Ultrsonic and Magnetic Resonance Medical Images and Applications
(Thesis) Arguer
 Gonzalo Vegas Sanchez-Ferrero (PhD)
Universidad de Valladolid, Spain
2012/12/03 Classification of Pigmented Skin Lesions based on Color Features
(Thesis) Arguer
 Ana Filipa Brissos Afonso (Master)
2012/11/15 What is the role of Color in Dermoscopy Analysis?
(Thesis) Arguer
 Ana Margarida Caetano Ruela (Master)
2012/10/29 MRI/TRUS data fusion, Prostate cancer diagnosis and focal treatment
(Thesis) Arguer
 David Manuel Galz Tavares (Master)
2012/10/17 Online Personalized Vital Signal Analysis for Real-time Health Monitoring
(Thesis) Arguer
 Can Ye (PhD)
Carnegie Mellon University, United States

Universidade do Porto Faculdade de Ciências, Portugal
2011/11/29 Detection and Classification of Human Colorectal Polyos, An Analysis of Image Curvature and Edge Detection in WCE Images
(Thesis) Arguer
 Ricardo Alexandre Freire Cotilho (Master)
2011/11/28 Spatiotemporal Dynamics of CBF and Bold fMRI responses to breath-hold challenges,
(Thesis) Arguer
 Joana Carolina Sequeira Pinto (Master)
2011/11/09 Detection and Classification of Human Colerectal Polyps
(Thesis) Arguer
 Filipe João Cabrita Condessa (Master)
2011/07/27 Automatic extraction of the size of myocardial infarction in an experimental murine model
(Thesis) Arguer
 Tiago Esteves (Master)
Universidade do Porto Faculdade de Engenharia, Portugal
2011/07/11 Determining Leishmania Infection Levels by Automatic Analysis of Microscopy Images
(Thesis) Arguer
 Pedro Gonçalo Ferreira Alves Nogueira (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2010/11/15 Brain-Computer Interfaces: Signal Processing and Pattern Recognition
(Thesis) Arguer
 João Cabrita (Master)
2010/11/12 fMRI data analysis techniques and the self-organizing maps approach
(Thesis) Arguer
 José de Oliveira Jordão (Master)
2010/07/02 Contour detection and grouping
(Thesis) Arguer
 José Jasnau Caeiro (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2010/04/23 Tomography Algorithms for Real-Time Control in ISTTOK
(Thesis) Arguer
 Pedro Jorge de Paula Carvalho (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2009/11/25 Functional Connectivity Measures in Memory Networks Using Independent Component Analysis
(Thesis) Arguer
 Catarina Saiote Ferreira Leite (Master)
2009/11/25 Investigation of face processing mechanisms in the brain using fMRI
(Thesis) Arguer
 Joana de Avelar Morgado Ferreira da Silva (Master)
2009/11/23 Automation of a SMD Component Placement Machine
(Thesis) Arguer
 João Oliveira do Rosário (Master)
2009/07/20 Development of Bioinformatic Tools to Track Cancer Cell Invation using 3D in Vitro Invation Assay
(Thesis) Arguer
 Rui Sérgio Malheiro Caldeira (Master)
Universidade do Porto Faculdade de Engenharia, Portugal
2009/07/20 Image Categorization and Data Search through Examples
(Thesis) Arguer
 Christophe Rodrigues da Silva (Master)
Universidade do Porto Faculdade de Engenharia, Portugal
2009/07/20 Identification of nodular regions in digital lung radiography images
(Thesis) Arguer
 Lúcio Orlando Mourão Alves (Master)
Universidade do Porto Faculdade de Engenharia, Portugal
2009/04/06 Adaptive algorithms for wireless channel tracking
(Thesis) Arguer
 Manuel Diogo Santos Mera (Master)
2008/11/05 Ekit - Support Kit for Learning Signals, Circuits and Electronic Systems
(Thesis) Arguer
 Nuno Filipe Maia Lucas (Master)
2008/10/09 Control with Multiple Models of Neuromuscular Blockade
(Thesis) Arguer
 Pedro Simões Oliveira (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2008/07/18 Real-Time Control of Plasma Column Position in the Tokamak ISTTOK
(Thesis) Arguer
 Daniel Filipe Valcárcel (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2008/07/16 Generic Middleware Implementation in CODAC of ISTTOK
(Thesis) Arguer
 André Sancho Cabral Guilhoto do Vale Duarte (Master)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2008/02/07 Image Segmentation and Reconstruction of 3D Surfaces from Carotid Ultrasound Images
(Thesis) Arguer
 Rui Rocha (PhD)
Universidade do Porto Faculdade de Engenharia, Portugal
2007/11/06 Dynamic Evaluation of Robot RIOL, aspects of an experimental prototype
(Thesis) Arguer
 Luís Miguel de Oliveira Tavares (Master)

Ad Hoc journal article review

Journal title (ISSN) Publisher
2020 - Current Nature Communications (2041-1723) Nature Publishing Group
2015 - 2019 Scientific Reports (2045-2322) Nature Publishing Group

Association member

Society Organization name Role
2011 - Current Member of the IEEE Engineering in Medicine and Biology Society (EMBS) Membro
2011 - Current IEEE Engineering in Medicine and Biology Society Senior member of the IEEE Engineering in Medicine and Biology Society (EMBS)
2018 - 2021 Vice-President of the Portuguese Chapter of the IEEE Biomedical Engineering Society, IEEE EMBS Portugal Chapter Vice-Presidente
2009 - 2013 President of the Portuguese Association for Pattern Recognition (APRP), an affiliate of the International Association of Pattern Recognition (IAPR) Presidente

Committee member

Activity description
Role 		Institution / Organization
2021 - Current Coordinator of the double degree program "International MSc program in Brain Science and Data Science"
Coordinator
 Bar-Ilan University, Israel

Universidade de Lisboa, Portugal
2021 - Current Program Coordinator - Erasmus Mundus joint MSc program in Brain Science and Data Science; Partnerships with the Universities of Amsterdam, Padova, Paris, Zagreb, Jyvaskyla and Tilburg
Coordinator
 Bar-Ilan University, Israel

Universidade de Lisboa, Portugal
2017 - Current Mobility Coordinator of the Integrated Master in Biomedical Engineering. Establishment of new bilateral agreements with international schools: - Faculty of Science and Engineering of the Sorbonne University. - Escuela Técnica Superior de Ingenieros de Telecomunicacion of the Polytechnic University of Madrid (UPM-ETSIT). - Faculty of Medicine of the University of Barcelona. - University Grenoble Alpes (UGA). - Faculty of Applied Sciences of the University of Liége - Carlos III University in Madrid.
Coordinator
 Universidade de Lisboa Instituto Superior Técnico, Portugal
2017 - Current Program Coordinator - Master in Technological Innovation in Health (MTiH); Partnership with the Universities of Sorbonne, Polytechnic of Madrid, Barcelona and Grenoble
Coordinator
 Universidade de Lisboa, Portugal
2015 - Current Coordinator of the Life-Engineering thematic area of the Laboratory for Robotics and Engineering Systems (LARSyS)
Coordinator
 Universidade de Lisboa Instituto de Sistemas e Robótica, Portugal
2020 - 2021 Coordination of the restructuring of the Integrated Master in Biomedical Engineering (MEBiom) in 2020/21 in the context of the report of the Commission for Analysis of the Teaching Model and Pedagogical Practices (CAMEPP). In this restructuring, MEBiom was split into Bachelor's (1st cycle) and Master's (2nd cycle).
Coordinator
 Universidade de Lisboa Instituto Superior Técnico, Portugal
2019 - 2019 Coordinated the design of the minor Health Engineering Applications
Coordinator
 Universidade de Lisboa Instituto Superior Técnico, Portugal
2010 - 2012 CIÊNCIA VIVA - Scientific occupation of young people on vacation (OCJNF), for secondary school students; Title: Biomedical signal processing and assessment of the Autonomous Nervous System
Coordinator
 Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2010 CIÊNCIA VIVA - Scientific occupation of young people on vacation (OCJNF), for secondary school students; Title: Introduction to Science at Instituto Superior Técnico
Member
 Universidade de Lisboa Instituto Superior Técnico, Portugal
2004 - 2007 Development of projects to improve the quality of DEEC teaching in the scientific area of Systems, Decision and Control (ACSDC)
Member
 Universidade de Lisboa Instituto Superior Técnico, Portugal

Conference scientific committee

Conference name Conference host
2020 - 2020 IEEE International Symposium on Biomedical Imaging (ISBI)
2020 - 2020 IEEE International Conference on Image Processing (ICIP)
2009 - 2018 IEEE International Symposium on Biomedical Imaging (ISBI)
2017 - 2017 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
2017 - 2017 IEEE International Conference on Image Processing (ICIP)
2016 - 2016 BIOIMAGING 2016 - 5th Symposium in Applied Bioimaging Universidade do Porto
2016 - 2016 IEEE International Conference on Image Processing (ICIP)
2015 - 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)
2015 - 2016 Computational Modeling of Objects Presented in Images: Fundamentals, Methods and Applications (CompIMAGE)
2015 - 2015 4rd Symposium in Applied Bioimaging (Bioimaging 2015) Universidade de Coimbra
2015 - 2015 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
2015 - 2015 IEEE International Conference on Image Processing (ICIP)
2015 - 2015 Mexican Conference on Pattern Recognition (MCPR)
2014 - 2014 3rd Symposium in Applied Bioimaging (Bioimaging 2014) Universidade do Porto, INEB
2013 - 2013 Bioimaging 2013 Universidade do Porto Faculdade de Engenharia
2013 - 2013 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
2013 - 2013 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)
2013 - 2013 Mexican Conference on Pattern Recognition (MCPR)
2013 - 2013 International Congress on Computational Bioengineering (ICCB)
2008 - 2013 Iberoamerican Congress on Pattern Recognition (CIARP)
2006 - 2013 International Conference on Image Analysis and Recognition (ICIAR)
2012 - 2012 IEEE International Conference on Image Processing (ICIP)
2012 - 2012 IEEE Emerging Signal Processing Applications Conference (ESPA)
2008 - 2012 Conferência Portuguesa de Reconhecimento de Padrões (RecPad)
2011 - 2011 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
2011 - 2011 Chilean Workshop on Pattern Recognition (CWPR)
2011 - 2011 ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing (VipImage)
2010 - 2011 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)
2010 - 2011 Mexican Conference on Pattern Recognition (MCPR)
2010 - 2010 Workshop on Signal Processing Systems (SiPS)
2010 - 2010 Computational Modeling of Objects Presented in Images: Fundamentals, Methods and Applications (CompIMAGE)
2009 - 2009 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)
2009 - 2009 Mediterranean Conference on Control and Automation (MED)
2009 - 2009 IEEE Industrial Electronics Society (IECON)
2008 - 2008 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP)
2006 - 2006 Iberoamerican Congress on Pattern Recognition (CIARP)
2005 - 2005 Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA)

Consulting

Activity description Institution / Organization
2009 - 2009 Collaboration with the Almada court as a specialist in ultrasound images Tribunal Judicial da Comarca de Almada, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2021 - Current Sistemas de Controlo em Bioengenharia Engenharia Biológica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2021 - Current SCOPE/Projeto Integrador de 2º ciclo Engenharia Biomédica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2021 - Current Fundamentos de Bioinstrumentação Engenharia Biomédica (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal
2016 - 2021 Neuroengenharia Tecnologias Biomédicas (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2016 - 2021 Instrumentação e Aquisição de Sinais em Bioengenharia Engenharia Biomédica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2013 - 2021 Sinais e Sistemas em Bioengenharia Engenharia Biomédica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2013 - 2018 Projeto em Engenharia Biomédica Engenharia Biomédica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2006 - 2018 Introdução à Engenharia Biomédica Engenharia Biomédica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2015 - 2016 Propriedades Eletromagnéticas Bioengenharia e Nanossistemas (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 - 2015 Imagiologia Biomédica Tecnologias Biomédicas (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2014 - 2015 Imagiologia Médica Engenharia Biomédica (Mestrado integrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2011 - 2015 Biomedical Image Processing (Doutoramento) Massachusetts Institute of Technology MIT Portugal Program, Portugal
2013 - 2014 Introdução à Bioeletricidade Bioengenharia e Nanossistemas (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2012 - 2014 Introdução à Engenharia Biomédica Tecnologias Biomédicas (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2012 - 2013 Processamento de Sinais Médicos e Biológicos Tecnologias Biomédicas (Mestrado) Universidade de Lisboa Instituto Superior Técnico, Portugal
2011 - 2013 Processamento Digital de Sinais em Bioengenharia Engenharia Biomédica (Doutoramento) Universidade de Lisboa Instituto Superior Técnico, Portugal
2009 - 2013 Advanced Signal Processing (Curso de doutoramento (conclusão de unidades curriculares)) Universidade de Lisboa Instituto Superior Técnico, Portugal
2012/03 - 2012/03 Tissue Characterization by Image Analysis for Diagnosis Purposes Mestrado em Informática Médica (Curso de mestrado (conclusão do curso de especialização)) Universidade do Porto Faculdade de Ciências, Portugal
2007 - 2012 Reconstrução em Imagem Médica Engenharia Biomédica (Doutoramento) Universidade de Lisboa Instituto Superior Técnico, Portugal
2008 - 2011 Actigraphy Signal Processing (Curso de mestrado (conclusão do curso de especialização)) Universidade de Lisboa Faculdade de Medicina, Portugal
2004 - 2011 Sistemas e Sinais Engenharia Electrotécnica e de Computadores (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal
1992 - 2011 Controlo Engenharia Electrotécnica e de Computadores (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal
2007 - 2008 Empreendedorismo (Especialização pós-bacharelato) Universidade de Lisboa Instituto Superior Técnico, Portugal
1997 - 2008 Processamento Digital de Sinais Engenharia Electrotécnica e de Computadores (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal
2003 - 2004 Análise de Circuitos Ciências de Engenharia - Engenharia Electrotécnica e de Computadores (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal
1995 - 2004 Perceção Engenharia Electrotécnica e de Computadores (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal
1993 - 1999 Processamento de Imagem e Visão Engenharia Electrotécnica e de Computadores (Licenciatura) Universidade de Lisboa Instituto Superior Técnico, Portugal

Evaluation committee

Activity description
Role 		Institution / Organization Funding entity
2013 - 2021 Evaluation of ANI projects (National Innovation Agency)
Evaluator
2013 - 2021 Member of the evaluation panel of applications for FCT (Fundation for Science and Technology) - PhD and post-doctoral fellowships in the field of Bioengineering
Evaluator
 Fundação para a Ciência e a Tecnologia
2020 - 2020 Participation in INFARMED's expert assessment panel for CEiiA's Antena V1 fan certification
Evaluator
 Infarmed Autoridade Nacional do Medicamento e Produtos de Saúde IP, Portugal
2020 - 2020 Participation as jury in an institutional call for Coordinator Professor
Evaluator
 Instituto Politécnico de Lisboa Instituto Superior de Engenharia de Lisboa, Portugal
2020 - 2020 Evaluation of project proposals submitted in the context of the FCT Call RESEARCH 4 COVID-19 competition
Evaluator
 Fundação para a Ciência e a Tecnologia
2019 - 2019 Participation as a jury in an institutional call for Assistant Professor
Evaluator
 Universidade de Lisboa Faculdade de Ciências, Portugal
2015 - 2015 Projects evaluation for the Israel Science Foundation, Israel Science Foundation (ISF)
Evaluator
 Israel Science Foundation
2014 - 2014 Evaluation of basic science projects for the Research Council of Norway in the field of engineering/technology in biomedical applications
Evaluator
 Norges forskningsråd
2012 - 2012 Member of the evaluation panel of applications for FCT (Fundation for Science and Technology) - PhD and post-doctoral grants in the Health field
Evaluator
 Fundação para a Ciência e a Tecnologia
2010 - 2010 Evaluation of applications for QREN mobilizing projects within the scope of the Healthy PPS5 - Body Interact program
Evaluator
2010 - 2010 Development of a scientific plan - Joint Doctoral Program with the Ecole Polytechnique Féderale de Lausanne (EPFL) in the field of imaging
Member
 Universidade de Lisboa Instituto Superior Técnico, Portugal

École Polytechnique Fédérale de Lausanne, Switzerland
2005 - 2007 Participation in the panel of experts that evaluated the kiosks and portable systems for acquiring biometric data for the service of foreigners and borders (SEF)
Evaluator
 Serviço de Estrangeiros e Fronteiras

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2021 Researchers propose mobile application to monitor symptoms - Disclosure of the e-CoVig project Expresso

Interview (tv / radio show)

Program Topic
2021/03/02 - 2021/03/02 SIC Notícias - Publicity of the Project e-Covid Oximeters, in the present, and in the future that may pass through Portugal

Other jury / evaluation

Activity description Institution / Organization
2021/07/20 - 2021/07/20 Thesis Monitoring Committee (CAT) - Artificial Intelligence-Based Decision Support Models for COVID-19 Detection, Sofia Pereira Universidade do Porto Faculdade de Engenharia, Portugal
2021/02/25 - 2021/02/25 Thesis Monitoring Committee (CAT) - Accelerating Quantitative Cardiovascular MRI: T1 mapping and flow quantification, Andreia Gaspar Universidade de Lisboa Instituto Superior Técnico, Portugal
2015/04/07 - 2016/04/07 Thesis Monitoring Committee (CAT) - Study of the spatiotemporal dynamics of epileptic activity using simultaneous EEG-fMRI: toward clinical applications, Rodolfo Telo Martins de Abreu Universidade de Lisboa Instituto Superior Técnico, Portugal
2013/12/13 - 2013/12/13 Thesis Monitoring Committee (CAT) - 3D Computational Methods for Brest Aesthetic Evaluation after Surgery, Hooshiar Zolfagharnasab Universidade do Porto Faculdade de Engenharia, Portugal
2013/12/13 - 2013/12/13 Thesis Monitoring Committee (CAT) - Thesis research plan on: Advanced Methods for Optical Coherence Tomography Choroidal Image Analysis, Raúl Pinheiro Universidade do Porto Faculdade de Engenharia, Portugal
2013/09/06 - 2013/09/06 Thesis Monitoring Committee (CAT) - Experimental Modeling of Incident Flames on Flat Plates and Analysis of Thermoacoustic Stability , Janaiína Gomes de Merícia Universidade de Lisboa Instituto Superior Técnico, Portugal
2013/07/25 - 2013/07/25 Thesis Monitoring Committee (CAT) - Cell mobility and morphology joint analysis in 2D and 3D Biology assays, Tiago Esteves Universidade do Porto Faculdade de Engenharia, Portugal
2013/04/10 - 2013/04/10 Thesis Monitoring Committee (CAT) - Ultrasound Based Navigation and Control for Orthopedic Robot Surgery, Pedro Miguel Baptista Torres Universidade de Lisboa Instituto Superior Técnico, Portugal
2012/05/02 - 2012/05/02 Thesis Monitoring Committee (CAT) - Development of quantitative methods for functional magnetic resonance imaging, Inês Sousa Universidade de Lisboa Instituto Superior Técnico, Portugal
2011/11/03 - 2011/11/03 Thesis Monitoring Committee (CAT)- A Hand-held Microsystem for Biologocal Analysis, José António Henriques Germano Universidade de Lisboa Instituto Superior Técnico, Portugal
Distinctions

Award

2015 Research award of 25.000 Euros for the project - Today´s present, tomorrow´s future on the study of germline E-cadherin missense mutations
No Stomach for Cancer, United States