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MÁRIO JORGE COSTA GASPAR DA SILVA. Completed the Título de Agregado in Informática in 2004/10 by Universidade de Lisboa Faculdade de Ciências, Mestrado in Mestrado em Telecomunicações e Computadores in 1987 by Universidade de Lisboa Instituto Superior Técnico, Licenciatura in Engenharia Electrotécnica in 1983 by Universidade de Lisboa Instituto Superior Técnico and Doctor of Philosophy in Electrical Engineering and Computer Science in 1994 by University of California, Berkeley. He is a Full Professor at Universidade de Lisboa Instituto Superior Técnico and Principal Investigator at Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa.
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Identification

Personal identification

Full name
Mário Jorge Costa Gaspar da Silva

Citation names

  • SILVA, MÁRIO J
  • Mario Gaspar da Silva

Author identifiers

Ciência ID
2116-58C7-7785
ORCID iD
0000-0002-5452-6185

Email addresses

  • mjs@inesc-id.pt (Professional)

Telephones

Telephone
  • 213100360 (Professional)

Addresses

  • Instituto Superior Técnico. Rua Alves Redol, 9, 1000-029, Lisboa, Lisboa, Portugal (Professional)

Websites

Knowledge fields

  • Exact Sciences - Computer and Information Sciences
  • Exact Sciences - Computer and Information Sciences - Information Science
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Engineering and Technology - Electrotechnical Engineering, Electronics and Informatics

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
French Intermediate (B1) Advanced (C1) Intermediate (B1) Intermediate (B1)
Spanish; Castilian Intermediate (B1) Advanced (C1) Intermediate (B1)
Education
Degree Classification
2004/10
Concluded
 Informática (Título de Agregado)
Major in Sistemas de Informação
Universidade de Lisboa Faculdade de Ciências, Portugal
"Recuperação de Informação: da Concepção à Exploração" (THESIS/DISSERTATION)
1994
Concluded
 Electrical Engineering and Computer Science (Doctor of Philosophy)
Major in Computer Aided Design
University of California, Berkeley, United States
"Active Documentation for VLSI Design" (THESIS/DISSERTATION)
 n/a
1987
Concluded
 Mestrado em Telecomunicações e Computadores (Mestrado)
Universidade de Lisboa Instituto Superior Técnico, Portugal
"Aplicações de CIAE no Projecto de Circuitos Electrónicos" (THESIS/DISSERTATION)
 muito bom
1983
Concluded
 Engenharia Electrotécnica (Licenciatura)
Major in Electrónica e Telecomunicações
Universidade de Lisboa Instituto Superior Técnico, Portugal
Affiliation

Science

Category
Host institution 		Employer
2011 - Current Principal Investigator (Research) Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
2007 - 2008 Principal Investigator (Research) Universidade de Lisboa Laboratório de Sistemas Informáticos de Grande Escala, Portugal
1990 - 1994 Research Assistant (Research) University of California, Berkeley, United States
1987 - 1990 Auxiliary Researcher (Research) INESC, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2011/07/01 - Current Full Professor (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
2009/04/01 - 2011/06/30 Full Professor (University Teacher) Universidade de Lisboa Faculdade de Ciências, Portugal
2001 - 2009 Associate Professor (University Teacher) Universidade de Lisboa Faculdade de Ciências, Portugal
1996 - 2001 Assistant Professor (University Teacher) Universidade de Lisboa Faculdade de Ciências, Portugal
1995 - 1996 Assistant Professor (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal
1988 - 1990 Assistant (University Teacher) Universidade de Lisboa Instituto Superior Técnico, Portugal

Others

Category
Host institution 		Employer
2021 - 2024 Head of Research and Innovation Truewind, Portugal
1994 - 1995 Senior Software Engineer EIT - Enterprise Information Technologies, United States
1983 - 1987 Engenheiro de Software / Software Engineer EID - Empresa de Investigação e Desenvolvimento, Portugal
Projects

Grant

Designation Funders
2022/10 - 2026/10 GDI - Genomic Data Infrastructure
101081813
Principal investigator
Ongoing
2020/05 - 2024/04 MOOD: MOnitoring Outbreak events for Disease surveillance in a data science context
874850
Integration into Research Grant Fellow
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
 EU Framework Programme for Research and Innovation Science with and for Society
Ongoing
2021/03/01 - 2024/02/28 DETECT- Data sciEnce Tools for Epidemiologic surveillance using multiple sourCes of daTa - Improved flu/COVID-19 tracking and detection of new outbreaks
DSAIPA/DS/0133/2020
Researcher
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
 FCT - Fundação para a Ciência e Tecnologia
Ongoing
2020/02 - 2023/06 ELIXIR-CONVERGE
871075
Principal investigator
Horizon 2020 Framework Programme
Ongoing
2020 - 2023 IntelligentCare – Intelligent Multimorbidity Management System
045948
Principal investigator
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
 Agência Nacional de Inovação SA
Ongoing
2016/12 - 2019/11 PRECISE - Accelerating progress toward the new era of precision medecine
16394
 FCT - Fundação para a Ciência e Tecnologia
2015/02 - 2019/01 ELIXIR-EXCELERATE: Fast-track ELIXIR Implementation and drive early user exploitation across the life-sciences
676559
 European Comisssion
2015/07 - 2016/12 EXPRESS - Expression and Recognition of Irony in Multicultural Social Media
UTAPEXPL/EEIESS/0031/2014
 FCT - Fundação para a Ciência e Tecnologia
2013/07 - 2016/06 Large-Scale Data Management in Cloud Environments
grant.Provided by PTCRIS: 127044
Principal investigator
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2012/03 - 2014/10 POPSTAR - Public Opinion and Sentiment Tracking, Analysis and Research
grant.Provided by PTCRIS: 116888
 Fundação para a Ciência e a Tecnologia
2012/03 - 2014/10 SOMER: Semantic Ontology Matching using External Resources
grant.Provided by PTCRIS: 119119
 Fundação para a Ciência e a Tecnologia
2010/10 - 2014/04 REACTION - Retrieval, Extraction, and Aggregation Computing Technology for Integrating and Organizing News
grant.Provided by PTCRIS: 110545
 Fundação para a Ciência e a Tecnologia
2009/02 - 2013/07 EPIWORK: Developing the Framework for an Epidemic Forecast Infrastructure
231807
 European Commission
2010/01 - 2013/06 PATI - IoT-Aware business Processes
grant.Provided by PTCRIS: 103751
 Fundação para a Ciência e a Tecnologia

Contract

Designation Funders
2022/01/01 - 2023/12/31 A Multimodal Approach for Identifying Conspiracy Theories in Social Media
EXPL/LLT-LIN/1104/2021
Researcher
Universidade do Minho, Portugal

Universidade do Porto Faculdade de Letras, Portugal

Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2020/04/01 - 2023/03/31 Salubridade de bivalves: sistema preditivo e de alerta precoce
DSAIPA/DS/0026/2019
Instituto Português do Mar e da Atmosfera, Portugal

Universidade Nova de Lisboa Laboratório para a Ciência da Computação e Informática, Portugal

Instituto de Telecomunicações Lisboa, Portugal

Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal

Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal

Universidade Nova de Lisboa Associação para a Inovação e Desenvolvimento da FCT, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2020 - 2022 Contrafake - Combate às Fake News
2017/POCI/SI/2019
Principal investigator
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa, Portugal
 Agência Nacional de Inovação SA
Concluded
Outputs

Publications

Book
  1. Duarte, F.; Martins, B.; Pinto, C.S.; Silva, M.J.. A deep learning method for ICD-10 coding of free-text death certificates. 2017.
    10.1007/978-3-319-65340-2_12
  2. Batista, D.S.; Silva, R.; Martins, B.; Silva, M.J.. A minwise hashing method for addressing relationship extraction from text. 2013.
    10.1007/978-3-642-41154-0_16
  3. Costa, M.; Silva, M.J.. Evaluating web archive search systems. 2012.
    10.1007/978-3-642-35063-4_32
  4. Batista, D.S.; Ferreira, J.D.; Couto, F.M.; Silva, M.J.. Toponym disambiguation using ontology-based semantic similarity. 2012.
    10.1007/978-3-642-28885-2_20
  5. Silva, M.J.; Carvalho, P.; Sarmento, L.. Building a sentiment lexicon for social judgement mining. 2012.
    10.1007/978-3-642-28885-2_25
  6. Moreira, S.; Batista, D.; Carvalho, P.; Couto, F.M.; Silva, M.J.. POWER - Politics Ontology for Web Entity Retrieval. 2011.
    10.1007/978-3-642-22056-2_51
  7. Cardoso, N.; Batista, D.; Lopez-Pellicer, F.J.; Silva, M.J.. Where in the Wikipedia is that answer? The XLDB at the GikiCLEF 2009 task. 2010.
    10.1007/978-3-642-15754-7_35
  8. Zamite, J.; Silva, F.A.B.; Couto, F.; Silva, M.J.. MEDCollector: Multisource epidemic data collector. 2010.
    10.1007/978-3-642-15020-3_2
  9. Lopez-Pellicer, F.J.; Silva, M.J.; Chaves, M.; Javier Zarazaga-Soria, F.; Muro-Medrano, P.R.. Geo linked data. 2010.
    10.1007/978-3-642-15364-8_42
  10. Lopes, L.F.; Silva, F.A.B.; Couto, F.; Zamite, J.; Ferreira, H.; Sousa, C.; Silva, M.J.. Epidemic marketplace: An information management system for epidemiological data. 2010.
    10.1007/978-3-642-15020-3_3
  11. Cardoso, N.; Sousa, P.; Silva, M.J.. Experiments with geographic evidence extracted from documents. 2009.
    10.1007/978-3-642-04447-2_117
  12. Couto, F.M.; Silva, M.J.; Lee, V.; Dimmer, E.; Camon, E.; Apweiler, R.; Kirsch, H.; Rebholz-Schuhmann, D.. Verification of uncurated protein annotations. 2009.
    10.4018/978-1-60566-274-9.ch016
  13. Couto, F.M.; Silva, M.J.. Mining bioliterature: Toward automatic annotation of genes and proteins. 2008.
    10.4018/978-1-59140-863-5.ch015
  14. Cardoso, N.; Cruz, D.; Chaves, M.; Silva, M.J.. Using geographic signatures as query and document scopes in geographic IR. 2008.
    10.1007/978-3-540-85760-0-101
  15. Martins, B.; Cardoso, N.; Chaves, M.S.; Andrade, L.; Silva, M.J.. The University of Lisbon at GeoCLEF 2006. 2007.
  16. Cardoso, N.; Silva, M.J.; Martins, B.. The University of Lisbon at CLEF 2006 ad-hoc task. 2007.
  17. Gomes, D.; Freitas, S.; Silva, M.J.. Design and selection criteria for a national web archive. 2006.
  18. Cardoso, N.; Martins, B.; Chaves, M.; Andrade, L.; Silva, M.J.. The XLDB Group at GeoCLEF 2005. 2006.
  19. Cardoso, N.; Andrade, L.; Simões, A.; Silva, M.J.. The XLDB Group at the CLEF 2005 ad-hoc task. 2006.
  20. Martins, B.; Silva, M.J.. A statistical study of the WPT-03 corpus. 2004.
  21. Martins, B.; Silva, M.J.. Spelling correction for search engine queries. 2004.
  22. Aires, R.; Aluísio, S.; Quaresma, P.; Santos, D.; Silva, M.J.. An initial proposal for cooperative evaluation on information retrieval in Portuguese. 2003.
  23. Silva, M.J.; Martins, B.. Web information retrieval with result set clustering. 2003.
  24. Noronha, N.; Campos, J.P.; Gomes, D.; Silva, M.J.; Borbinha, J.. A deposit for digital collections. 2001.
  25. Maria, N.; Silva, M.J.. Building a digital library of Web news. 2000.
  26. Campos, J.P.; Silva, M.J.. ActiveXML: Compound documents for integration of heterogeneous data sources. 2000.
  27. Silva, M.J.; Afonso, A.P.. Designing information appliances using a resource replication model. 1999.
    10.1007/3-540-48157-5_15
  28. Afonso, A.P.; Silva, M.J.; Campos, J.P.; Regateiro, F.S.. The design and implementation of the Ubidata information dissemination framework. 1999.
    10.1007/3-540-48157-5_50
  29. Maria, N.; Gaspar, P.; Grilo, N.; Ferreira, A.; Silva, M.J.. ARIADNE - Digital library architecture. 1998.
  30. Afonso, A.P.; Regateiro, F.S.; Silva, M.J.. Ubidata: An adaptable framework for information dissemination to mobile users. 1998.
Book chapter
  1. Danielle Caled; Mário J. Silva. "A Transfer Learning Analysis of Political Leaning Classification in Cross-domain Content". 267-277. Springer International Publishing, 2022.
    10.1007/978-3-030-98305-5_25
  2. Danielle Caled; Paula Carvalho; Mário J. Silva. "MINT - Mainstream and Independent News Text Corpus". 26-36. Springer International Publishing, 2022.
    10.1007/978-3-030-98305-5_3
  3. Paula Carvalho; Bruno Martins; Hugo Rosa; Silvio Amir; Jorge Baptista; Mário J. Silva. "Situational Irony in Farcical News Headlines". 65-75. Springer International Publishing, 2020.
    10.1007/978-3-030-41505-1_7
Conference paper
  1. Rui Silva; Lufialuiso Sampaio; Calado, Pável; Mario Gaspar da Silva; Anabela Delgado. "Matching administrative data for census purposes". Lisbon, 2017.
  2. SILVA, MÁRIO J. "Modelling Context with User Embeddings for Sarcasm Detection in Social Media". 2016.
    10.18653/v1/K16-1017
  3. Amir, S.; Astudillo, R.F.; Ling, W.; Silva, M.J.; Trancoso, I.. "INESC-ID at SemEval-2016 task 4-A: Reducing the problem of out-of-embedding words". 2016.
  4. Silva, M.J.; Chaves, T.; Simões, B.. "An ontology-based approach for SNOMED CT translation". 2015.
  5. Saleiro, P.; Amir, S.; Silva, M.; Soares, C.. "POPmine: Tracking political opinion on the web". 2015.
    10.1109/CIT/IUCC/DASC/PICOM.2015.228
  6. Batista, D.S.; Martins, B.; Silva, M.J.. "Semi-supervised bootstrapping of relationship extractors with distributional semantics". 2015.
  7. Astudillo, R.F.; Amir, S.; Lin, W.; Silva, M.; Trancoso, I.. "Learning word representations from scarce and noisy data with embedding sub-spaces". 2015.
  8. Costa, M.; Couto, F.M.; Silva, M.J.. "Learning temporal-dependent ranking models". 2014.
    10.1145/2600428.2609619
  9. Costa, M.; Gomes, D.; Couto, F.M.; Silva, M.J.. "A survey of web archive search architectures". 2013.
  10. Moreira, S.; Couto, F.; Filgueiras, J.; Martins, B.; Silva, M.J.. "REACTION: A naive machine learning approach for sentiment classification". 2013.
  11. Ferreira, J.D.; Pesquita, C.; Couto, F.M.; Silva, M.J.. "Bringing epidemiology into the semantic web". 2012.
  12. Costa, M.; Silva, M.J.. "Characterizing search behavior in web archives". 2011.
  13. Carvalho, P.; Sarmento, L.; Teixeira, J.; Silva, M.J.. "Liars and saviors in a sentiment annotated corpus of comments to political debates". 2011.
  14. Cardoso, N.; Silva, M.J.. "A GIR architecture with semantic-flavored query reformulation". 2010.
    10.1145/1722080.1722091
  15. Lopez-Pellicer, F.J.; Silva, M.J.; Chaves, M.. "Linkable geographic ontologies". 2010.
    10.1145/1722080.1722082
  16. Batista, D.S.; Silva, M.J.; Couto, F.M.; Behera, B.. "Geographic signatures for semantic retrieval". 2010.
    10.1145/1722080.1722104
  17. Domingos, D.; Martins, F.; Martinho, R.; Silva, M.. "Ad-hoc changes in IoT-aware business processes". 2010.
    10.1109/IOT.2010.5678432
  18. Sarmento, L.; Carvalho, P.; Silva, M.J.; De Oliveira, E.. "Automatic creation of a reference corpus for political opinion mining in user-generated content". 2009.
    10.1145/1651461.1651468
  19. Carvalho, P.; Sarmento, L.; Silva, M.J.; De Oliveira, E.. "Clues for detecting irony in user-generated contents: Oh...!! it's "so easy" ;-)". 2009.
    10.1145/1651461.1651471
  20. Cardoso, N.; Silva, M.J.; Santos, D.. "Handling implicit geographic evidence for geographic IR". 2008.
    10.1145/1458082.1458291
  21. Cardoso, N.; Sousa, P.; Silva, M.J.. "The University of Lisbon at GeoCLEF 2008". 2008.
  22. Silva, M.J.. "Message from the general chair". 2007.
  23. Cardoso, N.; Cruz, D.; Chaves, M.; Silva, M.J.. "The University of Lisbon at GeoCLEF 2007". 2007.
  24. Cardoso, N.; Silva, M.J.. "Query expansion through geographical feature types". 2007.
    10.1145/1316948.1316963
  25. Gomes, D.; Santos, A.L.; Silva, M.J.. "Managing duplicates in a web archive". 2006.
  26. Couto, F.M.; Silva, M.J.; Coutinho, P.M.. "Validating associations in biological databases". 2006.
    10.1145/1183614.1183639
  27. Gomes, D.; Silva, M.J.. "Modelling information persistence on the web". 2006.
    10.1145/1145581.1145623
  28. Martins, B.; Cardoso, N.; Chaves, M.S.; Andrade, L.; Silva, M.J.. "The University of Lisbon at GeoCLEF 2006". 2006.
  29. Cardoso, N.; Silva, M.J.; Martins, B.. "The University of Lisbon at CLEF 2006 ad-hoc task". 2006.
  30. Martins, B.; Silva, M.J.. "Language identification in Web pages". 2005.
    10.1145/1066677.1066852
  31. Couto, F.M.; Silva, M.J.; Coutinho, P.M.. "Semantic similarity over the gene ontology: Family correlation and selecting disjunctive ancestors". 2005.
    10.1145/1099554.1099658
  32. Martins, B.; Silva, M.J.; Andrade, L.. "Indexing and ranking in Geo-IR systems". 2005.
    10.1145/1096985.1096993
  33. Martins, B.; Silva, M.J.. "A graph-ranking algorithm for geo-referencing documents". 2005.
    10.1109/ICDM.2005.6
  34. Martins, B.; Silva, M.J.; Chaves, M.S.. "Challenges and resources for evaluating geographical IR". 2005.
    10.1145/1096985.1097001
  35. Cardoso, N.; Silva, M.J.; Costa, M.. "The XLDB Group at CLEF 2004". 2005.
  36. Ayala Botto, M.; Silva, M.; Sa Da Costa, J.. "Approximate min-max MPC for linear hybrid systems". 2005.
  37. Martins, B.; Chaves, M.; Silva, M.J.. "Assigning geographical scopes to Web pages". 2005.
  38. Cardoso, N.; Andrade, L.; Simões, A.; Silva, M.J.. "The XLDB Group participation at CLEF 2005 ad hoc task". 2005.
  39. Cardoso, N.; Martins, B.; Chaves, M.S.; Andrade, L.; Silva, M.J.. "The XLDB group at GeoCLEF 2005". 2005.
  40. Couto, F.M.; Martins, B.; Silva, M.J.. "Classifying biological articles using web resources". 2004.
  41. Silva, Mario J.; Katz, Randy H.. "Case for design using the world wide web". 1995.
  42. Silva, Mario J.; Katz, Randy H.. "Active Documentation: a new interface for VLSI design". 1993.
  43. Savoj, Hamid; Silva, Mario J.; Brayton, Robert K.; Sangiovanni-Vincentelli, Alberto. "Boolean matching in logic synthesis". 1992.
  44. Silva, Mario; Gedye, David; Katz, Randy; Newton, Richard. "Protection and versioning for Oct". 1989.
Journal article
  1. Duarte, F.; Martins, B.; Pinto, C.S.; Silva, M.J.. "Deep neural models for ICD-10 coding of death certificates and autopsy reports in free-text". Journal of Biomedical Informatics 80 (2018): 64-77. http://www.scopus.com/inward/record.url?eid=2-s2.0-85043403231&partnerID=MN8TOARS.
    10.1016/j.jbi.2018.02.011
  2. Costa, M.; Gomes, D.; Silva, M.J.. "The evolution of web archiving". International Journal on Digital Libraries 18 3 (2017): 191-205. http://www.scopus.com/inward/record.url?eid=2-s2.0-84966586076&partnerID=MN8TOARS.
    10.1007/s00799-016-0171-9
  3. Rijo, P.; Francisco, A.P.; Silva, M.J.. "Evaluating the impact of k-anonymization on the inference of interaction networks". Transactions on Data Privacy 9 1 (2016): 49-72. http://www.scopus.com/inward/record.url?eid=2-s2.0-84964308841&partnerID=MN8TOARS.
  4. Zamite, J.; Domingos, D.; Silva, M.J.; Santos, C.. "Group-based discretionary access control in health related repositories". Journal of Information Technology Research 7 1 (2014): 78-94. http://www.scopus.com/inward/record.url?eid=2-s2.0-84928107519&partnerID=MN8TOARS.
    10.4018/jitr.2014010106
  5. Pesquita, C.; Ferreira, J.D.; Couto, F.M.; Silva, M.J.. "The epidemiology ontology: An ontology for the semantic annotation of epidemiological resources". Journal of Biomedical Semantics 5 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84926282839&partnerID=MN8TOARS.
    10.1186/2041-1480-5-4
  6. Ferreira, J.D.; Paolotti, D.; Couto, F.M.; Silva, M.J.. "On the usefulness of ontologies in epidemiology research and practice". Journal of Epidemiology and Community Health 67 5 (2013): 385-388. http://www.scopus.com/inward/record.url?eid=2-s2.0-84883054070&partnerID=MN8TOARS.
    10.1136/jech-2012-201142
  7. Moreira, S.; Batista, D.S.; Carvalho, P.; Couto, F.M.; Silva, M.J.. "Tracking politics with POWER". Program 47 2 (2013): 120-135. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875630358&partnerID=MN8TOARS.
    10.1108/00330331311313708
  8. Couto, F.M.; Silva, M.J.. "Disjunctive shared information between ontology concepts: Application to Gene Ontology". Journal of Biomedical Semantics 2 1 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-84860703077&partnerID=MN8TOARS.
    10.1186/2041-1480-2-5
  9. Gomes, Daniel; Silva, Mario J.. "The Viuva Negra crawler: An experience report". Software-Practice & Experience 38 2 (2008): 161-188.
    10.1002/spe.825
  10. Couto, Francisco M.; Silva, Mario J.; Coutinho, Pedro M.. "Measuring semantic similarity between Gene Ontology terms". Data & Knowledge Engineering 61 1 (2007): 137-152.
    10.1016/j.datak.2006.05.003
  11. Couto, F.M.; Silva, M.J.; Lee, V.; Dimmer, E.; Camon, E.; Apweiler, R.; Kirsch, H.; Rebholz-Schuhmann, D.. "GOAnnotator: Linking protein GO annotations to evidence text". Journal of Biomedical Discovery and Collaboration 1 1 (2006): http://www.scopus.com/inward/record.url?eid=2-s2.0-34248361071&partnerID=MN8TOARS.
    10.1186/1747-5333-1-19
  12. Silva, Mario J.; Martins, Bruno; Chaves, Marcirio; Afonso, Ana Paula; Cardoso, Nuno. "Adding geographic scopes to web resources". Computers Environment and Urban Systems 30 4 (2006): 378-399.
    10.1016/j.compenvurbsys.2005.08.003
  13. Couto, FM; Silva, MJ; Coutinho, PM. "Finding genomic ontology terms in text using evidence content". Bmc Bioinformatics 6 (2005):
    10.1186/1471-2105-6-S1-S21
  14. Martins, B; Silva, MJ; IEEE Computer Society. "The WebCAT framework. Automatic generation of meta-data for Web resources". 2005 IEEE/WIC/ACM International Conference on Web Intelligence, Proceedings (2005): 236-242.
    10.1109/WI.2005.146
  15. Gomes, D.; Silva, M.J.. "Characterizing a national community Web". ACM Transactions on Internet Technology 5 3 (2005): 508-531. http://www.scopus.com/inward/record.url?eid=2-s2.0-27144499527&partnerID=MN8TOARS.
    10.1145/1084772.1084775
  16. Costa, M.; Silva, M.J.. "Distributed indexing of large-scale web collections,Indexação distribuída de colecções web de larga escala". IEEE Latin America Transactions 3 1 (2005): 2-8. http://www.scopus.com/inward/record.url?eid=2-s2.0-78149390955&partnerID=MN8TOARS.
    10.1109/TLA.2005.1468656
  17. Afonso, A.P.; Silva, M.J.. "Dynamic information dissemination to mobile users". Mobile Networks and Applications 9 5 (2004): 529-536. http://www.scopus.com/inward/record.url?eid=2-s2.0-3142681150&partnerID=MN8TOARS.
    10.1023/B:MONE.0000034706.03412.38
  18. Maria, N.; Silva, M.J.; Maria, Nuno; Silva, Mario J.. "Theme-based retrieval of web news". Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 1997 (2001): 26-37. http://www.scopus.com/inward/record.url?eid=2-s2.0-84944184250&partnerID=MN8TOARS.
Preprint
  1. Jorge Cerejo; Bernardo Neves; Nuno André da Silva; José Maria Moreira; Mário J. Silva. "Predicting Imminent Health Outcomes from Common Lab Results". 2023. https://doi.org/10.1101/2023.03.01.23286617.
    10.1101/2023.03.01.23286617
Activities

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2019 - 2024 A Data Science Approach for Handling Misinformation in Digital Media
Supervisor of Danielle Caled Vieira
 Computer Science and Engineering (PhD)
Universidade de Lisboa, Instituto Superior Técnico, Portugal
2013 - 2018 Agile Social Media Analysis with Neural Networks
Supervisor
Universidade de Lisboa, Instituto Superior Técnico, Portugal
2012 - 2016 Large-Scale Semantic Relationship Extraction for Information Discovery
Supervisor of David Soares Batista
Universidade de Lisboa, Instituto Superior Técnico, Portugal
2010 - 2014 Information Search in Web Archives
Supervisor of Miguel Costa
Universidade de Lisboa, Faculdade de Ciências, Portugal
2004/01/01 - 2008/12/31 Uma Metodologia para Construção de Geo-Ontologias
Supervisor
Universidade de Lisboa, Faculdade de Ciências, Portugal
2004 - 2008 Geographically Aware Web Text Mining
Supervisor
Universidade de Lisboa, Faculdade de Ciências, Portugal
2003 - 2007 Mapper: An Efficient Data Transformation Operator
Co-supervisor
Universidade de Lisboa, Faculdade de Ciências, Portugal
2002 - 2006 Web Modelling for Web Warehouse Design
Supervisor
Universidade de Lisboa, Faculdade de Ciências, Portugal
2002 - 2006 Relating Biologic Information through Literature
Supervisor
Universidade de Lisboa, Faculdade de Ciências, Portugal
2000 - 2004 Contribuições Metodológicas para a Construção de Agentes de Informação Personalizada
Supervisor
Universidade de Lisboa, Faculdade de Ciências, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2007 - 2007 ACM CIKM 2017 - Conference on Information and Knowledge Management (2007 - 2007)
Conference (President of the Organising Committee)
 Association for Computing Machinery, United States

Conference scientific committee

Conference name Conference host
2020 - 2020 European Conference on Information Retrieval
Distinctions

Other distinction

1990 Fulbright Scholar
Under Secretary for Public Diplomacy and Public Affairs, United States
1985 Prémio de Inovação e Criatividade