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I developed the research for my Doctorate in the area of Human Genetics, with the study of a neurodegenerative disorder, Machado-Joseph disease(MJD)/Spinocerebellar ataxia type 3 (SCA3), particularly prevalent in the Azores Islands. I have invested in the historical genetics and epidemiology of the disease in the Azores, and was particularly interested in understanding how a seemingly simple monogenic disease could be so complex in its clinical and genetic manifestations. This interrogation was the starting point from which molecular-oriented research on MJD has emerged. The extensively studied Azorean pedigrees and the existence of a homogeneous cohort which has been thoroughly followed for several years have allowed the development of studies on several aspects of this disease, which have been developed under my coordination. My research group has focused on molecular mechanisms of MJD (such as alternative splicing), patterns of transmission, particular clinical presentations, genetic modifiers and molecular biomarkers. In the last four years we have been integrated the European ESMI Consortium, which has been establish to organize a large trial ready cohort of MJD patients. The high prevalence of MJD in the Azores supports a close collaboration between researchers and patients, namely through the ¿Associação Atlântica de Apoio ao doente de Machado-Joseph¿ a patient¿s organization that has been playing a fundamental role in the Azores.
Identification

Personal identification

Full name
Maria Manuela de Medeiros Lima

Citation names

  • Lima, Manuela

Author identifiers

Ciência ID
2F1C-5AEC-47E5
ORCID iD
0000-0002-3357-3273
Scopus Author Id
55931286400

Knowledge fields

  • Medical and Health Sciences - Basic Medicine - Human Genetics
Education
Degree Classification
2011/01/31
Concluded
Genética Humana (Título de Agregado)
Major in Genética Humana
Universidade dos Açores, Portugal
Aprovada por unanimidade
1996
Concluded
Doutoramento em Biologia (Doutoramento)
Major in Outra:Antropologia Física
Universidade dos Açores, Portugal
"Doença do Machado-joseph Nos Açores: Estudo Epidemiológico, Biodemográfico e Genético" (THESIS/DISSERTATION)
1989
Concluded
Biologia/Geologia (Ensino) (Licenciatura)
Universidade dos Açores, Portugal
"n/a" (THESIS/DISSERTATION)
16 (escala 0-20)
Affiliation

Teaching in Higher Education

Category
Host institution
Employer
2021/02/01 - Current Full Professor (University Teacher) Universidade dos Açores, Portugal
Universidade dos Açores, Portugal
2006/11/16 - 2021/01/31 Associate Professor (University Teacher) Universidade dos Açores, Portugal
1996/06/20 - 2001/01/31 Assistant Professor (University Teacher) Universidade dos Açores, Portugal
Universidade dos Açores - Campus da Horta, Portugal
1992/02/01 - 1996/06/19 Assistant (University Teacher) Universidade dos Açores, Portugal
Universidade dos Açores, Portugal

Others

Category
Host institution
Employer
2001/06/20 - 2006 Professora Auxiliar de Nomeação Definitiva Universidade dos Açores, Portugal
1988/10/21 - 1992 Assistente Estagiária Universidade dos Açores, Portugal
Projects

Contract

Designation Funders
2021/01/01 - Current Assessment of ataxia severity under real-life conditions with SARAhome: A multicenter study in spinocerebellar ataxia type 3 (SCA3).
0000
Researcher
Universidade dos Açores, Portugal
National Ataxia Foundation
Ongoing
2022 - 2026 Living the Future Academy
N.º 002/C06-i03.03/2021 e N.º 002/C06-i04.01/2021
Principal investigator
Universidade dos Açores, Portugal
2022/01/01 - 2024/01/01 Metilação de DNA genome-wide na doença de Machado-Joseph (DMJ)/ataxia espinocerebelosa tipo 3 (SCA3): um estudo preliminar
M1.1.C/C.S./060/2021/01
Principal investigator
Universidade dos Açores, Portugal
Ongoing
2020/12/14 - 2022/12/15 ESMI Network- Support for the participation of the Azores
ESMI-Network
Principal investigator
Fundação Gaspar Frutuoso, Portugal
Ongoing
2019 - 2020 Unconditional Grant Agreement- CC009_MJD_TRY
MJD_TRy2019
Principal investigator
Universidade dos Açores, Portugal
uniQure NV
Concluded
2016/06/01 - 2019/03/29 Sequenciação do exoma de pares discordantes e concordantes de irmãos com ataxia espino-cerebelosa do tipo 3 (SCA3): uma ferramenta para identificar novos modificadores e investigar vias moleculares alteradas.
PTDC/DTP-PIC/2638/2014
Principal investigator
Universidade do Porto Instituto de Biologia Molecular e Celular, Portugal

Fundação Gaspar Frutuoso, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2018/01/01 - 2019/01/31 Apoptosis related genes BCL-2, BAX and TP53 as biomarkers of Machado-Joseph disease.
Not applicable
Principal investigator
Universidade dos Açores, Portugal
National Ataxia Foundation
Concluded
2018 - 2019 Discrimination of wild type and mutant ATXN3 mRNA levels by qPCR: protocol design and implementation
NA
Researcher
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
Ataxia UK
Concluded
1992 - 1995 Estudo da prevalência da doença de Machado-Joseph nas ilhas açorianas.
STRD/C/SAL/277/92
Researcher
Ministério da Saúde
Outputs

Publications

Book
  1. Lima, M.; Raposo, M.. Towards the identification of molecular biomarkers of spinocerebellar ataxia type 3 (SCA3)/Machado-Joseph disease (MJD). 2018.
    10.1007/978-3-319-71779-1_16
  2. Bettencourt, C.; Lima, M.. Genetics at different levels in machado-joseph disease (MJD/SCA3): Cause, modifiers and therapy. 2012.
  3. Bettencourt, C.; Lima, M.; de Yébenes, J.G.. The increasing number of SCA loci: Contributes from classical genetics and new genomics. 2012.
  4. Bettencourt, C.; Montiel, R.; Santos, C.; Prata, M.J.; Aluja, M.P.; Lima, M.. Diversity of maternal and paternal lineages in the geographic extremes of the Azores (Santa Maria and Flores Islands): Insights from mtDNA, Y-chromosome and surname data. 2006.
    10.1016/j.ics.2005.09.077
Book chapter
  1. Lima, Manuela. "Human Genomic Projects: Setting the Stage for Genome-Scale Anthropological Studies". 2016.
    10.2174/9781681083858116020004
  2. Eugénia Cunha E717-5464-E13B; Manuela Lima. "Complicities Between Forensic Anthropology and Forensic Genetics: New Opportunities for Genomics?". In Anthropology: Current and Future Developments, 206-218. BENTHAM SCIENCE PUBLISHERS, 2016.
  3. Lima, Manuela. "Genomics of Isolated Populations: Inferences for Gene-Finding Studies". 2016.
    10.2174/9781681083858116020008
  4. "Complicities Between Forensic Anthropology and Forensic Genetics: New Opportunities for Genomics?". 2016.
    10.2174/9781681083858116020013
  5. Nadya Kazachkova; Manuela Lima; Lima, Manuela. "Towards A Therapeutic Intervention in Polyglutamine Ataxias: From Models to Clinical Trials". In Frontiers in Clinical Drug Research - CNS and Neurological Disorders, 77-130. BENTHAM SCIENCE PUBLISHERS, 2015.
    10.2174/9781608059263114030006
  6. Foroni, Iris; Rita, Ana; Filipe, Bruno; Santos, Margarida; Lima, Manuela; Bruges-Armas, Jcome. "HLA-E, HLA-F and HLA-G — The Non-Classical Side of the MHC Cluster". In HLA and Associated Important Diseases. InTech, 2014.
    10.5772/57507
  7. Lima, Manuela; Bruges-Armas, Jcome; Bettencourt, Conceio. "Non-Mendelian Genetic Aspects in Spinocerebellar Ataxias (SCAS): The Case of Machado-Joseph Disease (MJD)". In Spinocerebellar Ataxia. InTech, 2012.
    10.5772/30319
  8. Filipe, Bruno; Foroni, Iris; Rita, Ana; Lima, Manuela; Bruges-Armas, Jcome. "Genetics in Ankylosing Spondylitis – Beyond HLA-B*27". In Clinical and Molecular Advances in Ankylosing Spondylitis. InTech, 2012.
    10.5772/30403
  9. Dutra, I.; Foroni, I.; Couto, A.R.; Lima, M.; Bruges-Armas, J.. "Molecular Diagnosis of Human Papillomavirus". In Human Papillomavirus and Related Diseases - From Bench to Bedside - Research aspects. InTech, 2012.
    10.5772/30165
  10. Dutra, I.; Foroni, I.; Couto, A.R.; Lima, M.; Bruges-Armas, J.. "Human Papillomavirus Worldwide Distribution in Women Without Cervical Cancer". In Human Papillomavirus and Related Diseases - From Bench to Bedside - Research aspects. InTech, 2012.
    10.5772/27116
Conference paper
  1. Raposo, Mafalda; Dahmani, Yahya; Silva, Francisca; Tavares, M.; Cymbron, Teresa; Santos, Cristina; Bettencourt, Conceição; et al. "Relationship of the APOE polymorphism and lipid profile: A population-based study in the Azores Islands (Portugal)". 2009.
  2. Ferin, Rita; Lima, Manuela; Pavão, Maria Leonor. "Assessment of some atherosclerosis risk factors in apparently healthy subjects from two Azorean populations". 2009.
    10.1016/S1567-5688(09)70626-9
Edited book
  1. Lima, Manuela; Amanda Ramos. Anthropology: Current and Future Developments. BENTHAM SCIENCE PUBLISHERS. 2016.
    10.2174/97816810838581160201
Journal article
  1. Duarte-Silva, Sara; Da Silva, Jorge Diogo; Monteiro-Fernandes, Daniela; Costa, Marta Daniela; Neves-Carvalho, Andreia; Raposo, Mafalda; Soares-Cunha, Carina; et al. "Glucocorticoid receptor-dependent therapeutic efficacy of tauroursodeoxycholic acid in preclinical models of Spinocerebellar ataxia type 3". Journal of Clinical Investigation (2024): http://dx.doi.org/10.1172/jci162246.
    10.1172/jci162246
  2. Faber, Jennifer; Berger, Moritz; Wilke, Carlo; Hubener-Schmid, Jeannette; Schaprian, Tamara; Santana, Magda M.; Grobe-Einsler, Marcus; et al. "Stage-Dependent Biomarker Changes in Spinocerebellar Ataxia Type 3". Annals of Neurology 95 2 (2023): 400-406. http://dx.doi.org/10.1002/ana.26824.
    10.1002/ana.26824
  3. Ana Ferreira; Mafalda Raposo; Emily D. Shaw; Naila S. Ashraf; Filipa Medeiros; M. F. Brilhante; Matthew Perkins; et al. "Tissue-Specific Vulnerability to Apoptosis in Machado-Joseph Disease". Cells (2023): https://www.mdpi.com/2073-4409/12/10/1404.
    10.3390/cells12101404
  4. Mafalda Raposo; Jeannette Hübener-Schmid; Ana F Ferreira; Ana Rosa Vieira Melo; João Vasconcelos; Paula Pires; Teresa Kay; et al. "Blood transcriptome sequencing identifies biomarkers able to track disease stages in spinocerebellar ataxia type 3". Brain (2023): http://dx.doi.org/10.1093/brain/awad128.
    10.1093/brain/awad128
  5. Uebachs, Mischa; Wegner, Philipp; Schaaf, Sebastian; Kugai, Simon; Jacobi, Heike; Kuo, Sheng-Han; Ashizawa, Tetsuo; et al. "SCAview: an Intuitive Visual Approach to the Integrative Analysis of Clinical Data in Spinocerebellar Ataxias". The Cerebellum (2023): http://dx.doi.org/10.1007/s12311-023-01546-0.
    10.1007/s12311-023-01546-0
  6. Santana, Magda M.; Gaspar, Laetitia S.; Pinto, Maria M.; Silva, Patrick; Adão, Diana; Pereira, Dina; Ribeiro, Joana Afonso; et al. "A standardized protocol for blood and cerebrospinal fluid collection and processing for biomarker research in ataxia". Neuropathology and Applied Neurobiology (2023): http://dx.doi.org/10.1111/nan.12892.
    10.1111/nan.12892
  7. Lima, Manuela; Raposo, Mafalda; Ferreira, Ana; Melo, Ana Rosa Vieira; Pavão, Sara; Medeiros, Filipa; Teves, Luís; et al. "The Homogeneous Azorean Machado-Joseph Disease Cohort: Characterization and Contributions to Advances in Research". Biomedicines 11 2 (2023): 247. http://dx.doi.org/10.3390/biomedicines11020247.
    Published • 10.3390/biomedicines11020247
  8. Daniela Couto; Liliana Sousa; Jorge Sequeiros; Manuela Lima; Álvaro Mendes. "Short Communication: Restrictions in care following the COVID-19 pandemic severely impacted Machado-Joseph disease patients: a study in the Azores Islands, Portugal". Journal of Community Genetics 13 (2022): 459-461.
    10.1007/s12687-022-00602-2
  9. Maas, Roderick P.P.W.M.; Teerenstra, Steven; Lima, Manuela; Pires, Paula; Pereira de Almeida, Luís; van Gaalen, Judith; Timmann, Dagmar; et al. "Differential Temporal Dynamics of Axial and Appendicular Ataxia in SCA3". Movement Disorders 37 9 (2022): 1850-1860. http://dx.doi.org/10.1002/mds.29135.
  10. Garcia-Moreno, Hector; Prudencio, Mercedes; Thomas-Black, Gilbert; Solanky, Nita; Jansen-West, Karen R.; Hanna AL-Shaikh, Rana; Heslegrave, Amanda; et al. "Tau and neurofilament light-chain as fluid biomarkers in spinocerebellar ataxia type 3". European Journal of Neurology 29 8 (2022): 2439-2452. http://dx.doi.org/10.1111/ene.15373.
  11. Melo, Ana Rosa Vieira; Raposo, Mafalda; Ventura, Marta; Martins, Sandra; Pavão, Sara; Alonso, Isabel; Bettencourt, Conceição; Lima, Manuela. "Genetic Variation in ATXN3 (Ataxin-3) 3'UTR: Insights into the Downstream Regulatory Elements of the Causative Gene of Machado-Joseph Disease/Spinocerebellar Ataxia Type 3". The Cerebellum (2022): http://dx.doi.org/10.1007/s12311-021-01358-0.
    10.1007/s12311-021-01358-0
  12. Raposo, Mafalda; Bettencourt, Conceição; Melo, Ana Rosa Vieira; Ferreira, Ana F.; Alonso, Isabel; Silva, Paulo; Vasconcelos, João; et al. "Novel Machado-Joseph disease-modifying genes and pathways identified by whole-exome sequencing". Neurobiology of Disease 162 (2022): 105578. http://dx.doi.org/10.1016/j.nbd.2021.105578.
    10.1016/j.nbd.2021.105578
  13. Lima, Manuela. "Characterization of Lifestyle in Spinocerebellar Ataxia Type 3 and Association with Disease Severity". Movement Disorders 37 2 (2021): 405-410. http://dx.doi.org/10.1002/mds.28844.
    Published • doi: 10.1002/mds.28844
  14. Hübener-Schmid, Jeannette; Kuhlbrodt, Kirsten; Peladan, Julien; Faber, Jennifer; Santana, Magda M.; Hengel, Holger; Jacobi, Heike; et al. "Polyglutamine-Expanded Ataxin-3: A Target Engagement Marker for Spinocerebellar Ataxia Type 3 in Peripheral Blood". Movement Disorders 36 11 (2021): 2675-2681. http://dx.doi.org/10.1002/mds.28749.
    10.1002/mds.28749
  15. Akçimen, Fulya; Martins, Sandra; Liao, Calwing; Bourassa, Cynthia V.; Catoire, Hélène; Nicholson, Garth A.; Riess, Olaf; et al. "Genome-wide association study identifies genetic factors that modify age at onset in Machado-Joseph disease". Aging 6 12 (2020): 4742-4756. http://dx.doi.org/10.18632/aging.102825.
    Published • 10.18632/aging.102825
  16. Yau, Wai Yan; Raposo, Mafalda; Bettencourt, Conceição; Labrum, Robyn; Vasconcelos, João; Parkinson, Michael H; Giunti, Paola; et al. "The repeat variant in MSH3 is not a genetic modifier for spinocerebellar ataxia type 3 and Friedreich ataxia". Brain 143 4 (2020): e25-e25. http://dx.doi.org/10.1093/brain/awaa043.
    10.1093/brain/awaa043
  17. Wilke, C.; Haas, E.; Reetz, K.; Faber, J.; Garcia-Moreno, H.; Santana, M.M.; van de Warrenburg, B.; et al. "Neurofilaments as blood biomarkers at the preataxic and ataxic stage of spinocerebellar ataxia type 3: a cross-species analysis in humans and mice.". EMBO Molecular Medicine 12 7 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85086096828&partnerID=MN8TOARS.
    Published • 10.15252/emmm.201911803
  18. Ferreira, Ana F.; Raposo, Mafalda; Vasconcelos, João; Costa, Maria do Carmo; Lima, Manuela. "Selection of Reference Genes for Normalization of Gene Expression Data in Blood of Machado-Joseph Disease/Spinocerebellar Ataxia Type 3 (MJD/SCA3) Subjects". Journal of Molecular Neuroscience 69 3 (2019): 450-455. http://dx.doi.org/10.1007/s12031-019-01374-0.
  19. Ramos, A.; Planchat, M.; Vieira Melo, A. R.; Raposo, M.; Shamim, U.; Suroliya, V.; Srivastava, A. K.; et al. "Mitochondrial DNA haplogroups and age at onset of Machado–Joseph disease/spinocerebellar ataxia type 3: a study in patients from multiple populations". European Journal of Neurology 26 3 (2018): 506-512. http://dx.doi.org/10.1111/ene.13860.
  20. de Mattos, E. P.; Leotti, V. B.; Soong, B.-W.; Raposo, M.; Lima, M.; Vasconcelos, J.; Fussiger, H.; et al. "Age at onset prediction in spinocerebellar ataxia type 3 changes according to population of origin". European Journal of Neurology 26 1 (2018): 113-120. http://dx.doi.org/10.1111/ene.13779.
    10.1111/ene.13779
  21. Santos, Margarida Rodrigues; Couto, Ana Rita; Foroni, Iris; Bettencourt, Bruno Filipe; Li, Zhixiu; Meneses, Raquel; Wheeler, Lawrie; et al. "Non-classical human leucocyte antigens in ankylosing spondylitis: possible association with HLA-E and HLA-F". RMD Open 4 1 (2018): e000677. http://dx.doi.org/10.1136/rmdopen-2018-000677.
    10.1136/rmdopen-2018-000677
  22. Raposo, Mafalda; Ramos, Amanda; Santos, Cristina; Kazachkova, Nadiya; Teixeira, Balbina; Bettencourt, Conceição; Lima, Manuela. "Accumulation of Mitochondrial DNA Common Deletion Since The Preataxic Stage of Machado-Joseph Disease". Molecular Neurobiology 56 1 (2018): 119-124. http://dx.doi.org/10.1007/s12035-018-1069-x.
    10.1007/s12035-018-1069-x
  23. Lima, Manuela; Raposo, Mafalda; Bettencourt, Conceição; Ramos, Amanda; Kazachkova, Nadiya; Vasconcelos, João; Kay, Teresa; Bruges-Armas, Jácome; Lima, Manuela. "Promoter Variation and Expression Levels of Inflammatory Genes IL1A, IL1B, IL6 and TNF in Blood of Spinocerebellar Ataxia Type 3 (SCA3) Patients". NeuroMolecular Medicine 19 1 (2017): 41-45. http://dx.doi.org/10.1007/s12017-016-8416-8.
    10.1007/s12017-016-8416-8
  24. Lima, Manuela; González, Carlos; Vieira, Sara; Araújo, Conceição; Kazachkova, Nadiya; Raposo, Mafalda; Vasconcelos, João; Kay, Teresa; Lima, Manuela. "A «aceitação» em portadores assintomáticos e sintomáticos da doença de Machado-Joseph". Mindfulness & Compassion 2 1 (2017): 26-33. http://dx.doi.org/10.1016/j.mincom.2016.11.002.
    10.1016/j.mincom.2016.11.002
  25. Kazachkova, N.; Raposo, M.; Ramos, A.; Montiel, R.; Lima, M.; Kazachkova, Nadiya; Raposo, Mafalda; et al. "Promoter Variant Alters Expression of the Autophagic BECN1 Gene: Implications for Clinical Manifestations of Machado-Joseph Disease". Cerebellum 16 5-6 (2017): 957-963. http://www.scopus.com/inward/record.url?eid=2-s2.0-85023162613&partnerID=MN8TOARS.
    10.1007/s12311-017-0875-4
  26. Linhares, Diana Paula Silva; Garcia, Patrícia Ventura; Silva, Catarina; Barroso, Joana; Kazachkova, Nadya; Pereira, Rui; Lima, Manuela; et al. "DNA damage in oral epithelial cells of individuals chronically exposed to indoor radon (222Rn) in a hydrothermal area". Environmental Geochemistry and Health 40 5 (2016): 1713-1724. http://dx.doi.org/10.1007/s10653-016-9893-2.
    10.1007/s10653-016-9893-2
  27. Melo, A.R.V.; Ramos, A.; Kazachkova, N.; Raposo, M.; Bettencourt, B.F.; Rendeiro, A.R.; Kay, T.; et al. "Triplet Repeat Primed PCR (TP-PCR) in Molecular Diagnostic Testing for Spinocerebellar Ataxia Type 3 (SCA3)". Molecular Diagnosis and Therapy 20 6 (2016): 617-622. http://www.scopus.com/inward/record.url?eid=2-s2.0-84988355035&partnerID=MN8TOARS.
    10.1007/s40291-016-0235-y
  28. Bettencourt, C.; Hensman-Moss, D.; Flower, M.; Wiethoff, S.; Brice, A.; Goizet, C.; Stevanin, G.; et al. "DNA repair pathways underlie a common genetic mechanism modulating onset in polyglutamine diseases". Annals of Neurology 79 6 (2016): 983-990. http://www.scopus.com/inward/record.url?eid=2-s2.0-84971318192&partnerID=MN8TOARS.
    10.1002/ana.24656
  29. Ramos, Amanda; Raposo, Mafalda; Milà, Montserrat; Bettencourt, Conceição; Houlden, Henry; Cisneros, Bulmaro; Magaña, Jonathan J.; et al. "Verification of Inter-laboratorial Genotyping Consistency in the Molecular Diagnosis of Polyglutamine Spinocerebellar Ataxias". Journal of Molecular Neuroscience 58 1 (2015): 83-87. http://dx.doi.org/10.1007/s12031-015-0646-y.
    10.1007/s12031-015-0646-y
  30. Raposo, Mafalda; Ramos, Amanda; Bettencourt, Conceição; Lima, Manuela. "Replicating studies of genetic modifiers in spinocerebellar ataxia type 3: can homogeneous cohorts aid?". Brain 138 12 (2015): e398-e398. http://dx.doi.org/10.1093/brain/awv206.
    10.1093/brain/awv206
  31. Ramos, Amanda; Kazachkova, Nadiya; Silva, Francisca; Maciel, P.; Fernandes, Anabela Silva; Silva, Sara Carina Duarte; Santos, Cristina; Lima, Manuela. "Differential mtDNA damage patterns in a transgenic mouse model of Machado-Joseph disease (MJD/SCA3)". (2015): http://hdl.handle.net/1822/32524.
    10.1007/s12031-014-0360-1
  32. Raposo, Mafalda; Bettencourt, Conceição; Maciel, P.; Gao, Fuying; Ramos, Amanda; Kazachkova, Nadiya; Vasconcelos, João; et al. "Novel candidate blood-based transcriptional biomarkers of Machado-Joseph disease". (2015): http://hdl.handle.net/1822/42783.
    10.1002/mds.26238
  33. Couto AR, Parreira B; Machado V, Menezes S. "Gitelmans Syndrome Associated with Chondrocalcinosis: A Case Study from the Azores Islands (Portugal)". Rheumatology: Current Research 05 03 (2015): http://dx.doi.org/10.4172/2161-1149.1000163.
    10.4172/2161-1149.1000163
  34. Cymbron, T.; Mendes, P.; Ramos, A.; Raposo, M.; Kazachkova, N.; Medeiros, A.M.; Bruges-Armas, J.; Bourbon, M.; Lima, M.. "Familial hypercholesterolemia: Molecular characterization of possible cases from the Azores Islands (Portugal)". Meta Gene 2 (2014): 638-645. http://www.scopus.com/inward/record.url?eid=2-s2.0-84916199209&partnerID=MN8TOARS.
    10.1016/j.mgene.2014.08.004
  35. Raposo, M.; Vasconcelos, J.; Bettencourt, C.; Kay, T.; Coutinho, P.; Lima, M.. "Nystagmus as an early ocular alteration in Machado-Joseph disease (MJD/SCA3)". BMC Neurology 14 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84892664065&partnerID=MN8TOARS.
    10.1186/1471-2377-14-17
  36. Kazachkova N; Ramos A; Santos C; Lima M. "Mitochondrial DNA Damage Patterns and Aging: Revising the Evidences for Humans and Mice.". (2013): http://europepmc.org/abstract/med/24307967.
  37. Kazachkova, Nadiya; Raposo, Mafalda; Montiel, Rafael; Cymbron, Teresa; Bettencourt, Conceição; Fernandes, Anabela Silva; Silva, Sara Carina Duarte; Maciel, P.; Lima, Manuela. "Patterns of mitochondrial DNA damage in blood and brain tissues of a transgenic mouse model of Machado-Joseph disease". (2013): http://hdl.handle.net/1822/26940.
    10.1159/000339207
  38. Bettencourt, C.; Lima, M.. ""Mimicking" capacity of spinocerebellar ataxia type 3: The details matter". Journal of the Neurological Sciences 326 1-2 (2013): 120-121. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875424663&partnerID=MN8TOARS.
    10.1016/j.jns.2013.01.022
  39. Bettencourt, C.; Raposo, M.; Ros, R.; Montiel, R.; Bruges-Armas, J.; Lima, M.. "Transcript Diversity of Machado-Joseph Disease Gene (ATXN3) Is Not Directly Determined by SNPs in Exonic or Flanking Intronic Regions". Journal of Molecular Neuroscience 49 3 (2013): 539-543. http://www.scopus.com/inward/record.url?eid=2-s2.0-84880628160&partnerID=MN8TOARS.
    10.1007/s12031-012-9832-3
  40. Kazachkova, N.; Ramos, A.; Santos, C.; Lima, M.. "Mitochondrial DNA damage patterns and aging: Revising the evidences for humans and mice". Aging and Disease 4 6 (2013): 337-350. http://www.scopus.com/inward/record.url?eid=2-s2.0-84897727564&partnerID=MN8TOARS.
    10.14336/AD.2013.0400337
  41. Bettencourt, B.F.; Rocha, F.L.; Alves, H.; Amorim, R.; Caetano-Lopes, J.; Vieira-Sousa, E.; Pimentel-Santos, F.; et al. "Protective effect of an ERAP1 haplotype in ankylosing spondylitis: Investigating non-MHC genes in HLA-B27-positive individuals". Rheumatology (United Kingdom) 52 12 (2013): 2168-2176. http://www.scopus.com/inward/record.url?eid=2-s2.0-84887669101&partnerID=MN8TOARS.
    10.1093/rheumatology/ket269
  42. Bettencourt C; Raposo M; Kazachkova N; Santos C; Kay T; Vasconcelos J; Maciel P; et al. "Sequence analysis of 5' regulatory regions of the Machado-Joseph disease gene (ATXN3).". (2012): http://europepmc.org/abstract/med/22422287.
    10.1007/s12311-012-0373-7
  43. Gonzalez, C.; Gomes, E.; Kazachkova, N.; Bettencourt, C.; Raposo, M.; Kay, T.T.; MacLeod, P.; Vasconcelos, J.; Lima, M.. "Psychological well-being and family satisfaction levels five years after being confirmed as a carrier of the machado-joseph disease mutation". Genetic Testing and Molecular Biomarkers 16 12 (2012): 1363-1368. http://www.scopus.com/inward/record.url?eid=2-s2.0-84869407490&partnerID=MN8TOARS.
    10.1089/gtmb.2011.0370
  44. Siebert, M.; Donis, K.C.; Socal, M.; Rieder, C.R.M.; Emmel, V.E.; Vairo, F.; Michelin-Tirelli, K.; et al. "Glucocerebrosidase gene variants in parkinsonian patients with Machado Joseph/spinocerebellar ataxia 3". Parkinsonism and Related Disorders 18 2 (2012): 185-190. http://www.scopus.com/inward/record.url?eid=2-s2.0-84856234407&partnerID=MN8TOARS.
    10.1016/j.parkreldis.2011.09.024
  45. Bettencourt C; Raposo M; Kazachkova N; Cymbron T; Santos C; Kay T; Vasconcelos J; et al. "The APOE e2 allele increases the risk of earlier age at onset in Machado-Joseph disease.". Archives of Neurology 68 12 (2011): 1580-1583. http://europepmc.org/abstract/med/22159055.
    10.1001/archneurol.2011.636
  46. Bettencourt C; Lima M. "Machado-Joseph Disease: from first descriptions to new perspectives.". (2011): http://europepmc.org/abstract/med/21635785.
    10.1186/1750-1172-6-35
  47. Ramos, A.; Barbena, E.; Mateiu, L.; del Mar González, M.; Mairal, Q.; Lima, M.; Montiel, R.; Aluja, M.P.; Santos, C.. "Nuclear insertions of mitochondrial origin: Database updating and usefulness in cancer studies". Mitochondrion 11 6 (2011): 946-953. http://www.scopus.com/inward/record.url?eid=2-s2.0-82755182650&partnerID=MN8TOARS.
    10.1016/j.mito.2011.08.009
  48. Bettencourt, C.; Santos, C.; Coutinho, P.; Rizzu, P.; Vasconcelos, J.; Kay, T.; Cymbron, T.; et al. "Parkinsonian phenotype in Machado-Joseph disease (MJD/SCA3): A two-case report". BMC Neurology 11 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-80054808790&partnerID=MN8TOARS.
    10.1186/1471-2377-11-131
  49. Cymbron, T.; Raposo, M.; Kazachkova, N.; Bettencourt, C.; Silva, F.; Santos, C.; Dahmani, Y.; et al. "Cross-sectional study of risk factors for atherosclerosis in the Azorean population". Annals of Human Biology 38 3 (2011): 354-359. http://www.scopus.com/inward/record.url?eid=2-s2.0-79953085645&partnerID=MN8TOARS.
    10.3109/03014460.2011.553203
  50. Bettencourt C; Santos C; Montiel R; Kay T; Vasconcelos J; Maciel P; Lima M. "The (CAG)n tract of Machado-Joseph Disease gene (ATXN3): a comparison between DNA and mRNA in patients and controls.". (2010): http://europepmc.org/abstract/med/19935829.
    10.1038/ejhg.2009.215
  51. Bettencourt C; Santos C; Montiel R; Costa Mdo C; Cruz-Morales P; Santos LR; Simões N; et al. "Increased transcript diversity: novel splicing variants of Machado-Joseph disease gene (ATXN3).". (2010): http://europepmc.org/abstract/med/19714377.
    10.1007/s10048-009-0216-y
  52. Santos C; Fregel R; Cabrera VM; González AM; Larruga JM; Lima M. "Mitochondrial DNA patterns in the Macaronesia islands: Variation within and among archipelagos.". (2010): http://europepmc.org/abstract/med/19927277.
    10.1002/ajpa.21180
  53. Silva F; Pereira R; Gusmão L; Santos C; Amorim A; Prata MJ; Bettencourt C; Lourenço P; Lima M. "Genetic profiling of the Azores Islands (Portugal): data from 10 X-chromosome STRs.". (2010): http://europepmc.org/abstract/med/19593741.
    10.1002/ajhb.20971
  54. Santos C; Alvarez L; Aluja MP; Bruges-Armas J; Lima M. "Genetic structure of the Azores Islands: a study using 15 autosomal short tandem repeat loci.". (2009): http://europepmc.org/abstract/med/20102040.
  55. Jordana X; Galtés I; Couto AR; Gales L; Damas M; Lima M; Bruges-Armas J. "The coexistence of ankylosing spondylitis and diffuse idiopathic skeletal hyperostosis--a postmortem diagnosis.". (2009): http://europepmc.org/abstract/med/19089487.
    10.1007/s10067-008-1068-9
  56. Amaral, André; Cymbron, Teresa; Gärtner, Fátima; Lima, Manuela; Rodrigues, Armindo; Amaral, A.F.S.; Cymbron, T.; et al. "Trace metals and over-expression of metallothioneins in bladder tumoral lesions: a case-control study". BMC Veterinary Research 5 (2009): http://hdl.handle.net/10400.3/1366.
    10.1186/1746-6148-5-24
  57. Santos, C.; Alvarez, L.; Aluja, M.P.; Bruges-Armas, J.; Lima, M.. "Genetic structure of the azores islands: A study using 15 autosomal short tandem repeat loci | Geneticka struktura azorskog otocja: Studija 15 autosomnih kratkih ponavljaju]ih slijedova (STR)". Collegium Antropologicum 33 4 (2009): 991-999. http://www.scopus.com/inward/record.url?eid=2-s2.0-77949523642&partnerID=MN8TOARS.
  58. Lima, Manuela. "Mitochondrial DNA Mutations in Cancer: A Review". Current Topics in Medicinal Chemistry (2008): http://dx.doi.org/10.2174/156802608786141151.
    10.2174/156802608786141151
  59. Bettencourt C; Santos C; Kay T; Vasconcelos J; Lima M. "Analysis of segregation patterns in Machado-Joseph disease pedigrees.". (2008): http://europepmc.org/abstract/med/18688568.
    10.1007/s10038-008-0330-y
  60. Santos C; Montiel R; Arruda A; Alvarez L; Aluja MP; Lima M. "Mutation patterns of mtDNA: empirical inferences for the coding region.". (2008): http://europepmc.org/abstract/med/18518963.
    10.1186/1471-2148-8-167
  61. Bettencourt, Conceição; Fialho, Raquel Nunes; Santos, Cristina; Montiel, Rafael; Bruges-Armas, Jácome; Maciel, P.; Lima, Manuela. "Segregation distortion of wild-type alleles at the Machado-Joseph disease locus: a study in normal families from the Azores islands (Portugal)". (2008): http://hdl.handle.net/1822/61455.
    10.1007/s10038-008-0261-7
  62. Santos, C.; Abade, A.; Lima, M.; Santos C; Abade A; Lima M. "Testing hierarchical levels of population sub-structuring: The Azores islands (Portugal) as a case study". Journal of Biosocial Science 40 4 (2008): 607-621. http://www.scopus.com/inward/record.url?eid=2-s2.0-44649190563&partnerID=MN8TOARS.
    10.1017/S0021932007002477
  63. Neto D; Montiel R; Bettencourt C; Santos C; Prata MJ; Lima M. "The African contribution to the present-day population of the Azores Islands (Portugal): analysis of the Y chromosome haplogroup E.". (2007): http://europepmc.org/abstract/med/17712788.
    10.1002/ajhb.20651
  64. Bettencourt, Conceição; Montiel, Rafael; Santos, Cristina; Pavão, Maria Leonor; Viegas-Crespo, Ana Maria; Lopes, Paula Alexandra; Lima, Manuela; et al. "Polymorphism of the APOE locus in the Azores Islands (Portugal)". Human Biology 78 4 (2006): 509-512. http://hdl.handle.net/10400.3/2780.
    10.1353/hub.2006.0053
  65. Santos, C.; Montiel, R.; Bettencourt, C.; Prata, M.J.; Abade, A.; Aluja, M.P.; Lima, M.; et al. "Peopling, demographic history and genetic structure of the Azores Islands: Integrating data from mtDNA and Y-chromosome". International Congress Series 1288 (2006): 85-87. http://www.scopus.com/inward/record.url?eid=2-s2.0-33645946098&partnerID=MN8TOARS.
    10.1016/j.ics.2005.11.052
  66. Santos C; Montiel R; Sierra B; Bettencourt C; Fernandez E; Alvarez L; Lima M; Abade A; Aluja MP. "Understanding differences between phylogenetic and pedigree-derived mtDNA mutation rate: a model using families from the Azores Islands (Portugal).". (2005): http://europepmc.org/abstract/med/15814829.
    10.1093/molbev/msi141
  67. Fernando O; Mota P; Lima M; Silva C; Montiel R; Amorim A; Prata MJ; et al. "Peopling of the Azores Islands (Portugal): data from the Y chromosome.". Human Biology 77 2 (2005): 189-199. http://europepmc.org/abstract/med/16201136.
  68. van Asch B; Pereira L; Pereira F; Santa-Rita P; Lima M; Amorim A. "MtDNA diversity among four Portuguese autochthonous dog breeds: a fine-scale characterisation.". (2005): http://europepmc.org/abstract/med/15972107.
    10.1186/1471-2156-6-37
  69. Lima, M.; Costa, M.C.; Montiel, R.; Ferro, A.; Santos, C.; Silva, C.; Bettencourt, C.; et al. "Population Genetics of Wild-Type CAG Repeats in the <i>Machado-Joseph Disease</i> Gene in Portugal". Human Heredity 60 3 (2005): 156-163. http://dx.doi.org/10.1159/000090035.
    10.1159/000090035
  70. Santos, C.; Abade, A.; Cantons, J.; Mayer, F.M.; Aluja, M.P.; Lima, M.; Santos C; et al. "Genetic structure of Flores island (Azores, Portugal) in the 19th century and in the present day: Evidence from surname analysis". Human Biology 77 3 (2005): 317-341. http://www.scopus.com/inward/record.url?eid=2-s2.0-27244437100&partnerID=MN8TOARS.
  71. Montiel, R.; Bettencourt, C.; Silva, C.; Santos, C.; Prata, M.J.; Lima, M.. "Analysis of Y-chromosome variability and its comparison with mtDNA variability reveals different demographic histories between islands in the Azores Archipelago (Portugal)". Annals of Human Genetics 69 2 (2005): 135-144. http://www.scopus.com/inward/record.url?eid=2-s2.0-14944341274&partnerID=MN8TOARS.
    10.1046/j.1469-1809.2004.00146.x
  72. Gonzalez C; Lima M; Kay T; Silva C; Santos C; Santos J. "Short-term psychological impact of predictive testing for Machado-Joseph disease: depression and anxiety levels in individuals at risk from the Azores (Portugal).". (2004): http://europepmc.org/abstract/med/15692194.
    10.1159/000082262
  73. Santos, C.; Montiel, R.; Anglés, N.; Lima, M.; Francalacci, P.; Malgosa, A.; Abade, A.; Aluja, M.P.. "Determination of human caucasian mitochondrial DNA haplogroups by means of a hierarchical approach". Human Biology 76 3 (2004): 431-453. http://www.scopus.com/inward/record.url?eid=2-s2.0-4644259232&partnerID=MN8TOARS.
  74. Santos, C.; Lima, M.; Montiel, R.; Angles, N.; Pires, L.; Abade, A.; Aluja, Ma.P.. "Genetic structure and origin of peopling in the Azores Islands (Portugal): The view from mtDNA". Annals of Human Genetics 67 5 (2003): 433-456. http://www.scopus.com/inward/record.url?eid=2-s2.0-0141727456&partnerID=MN8TOARS.
    10.1046/j.1469-1809.2003.00031.x
  75. Lima, M.; Smith, M.; Silva, C.; Abade, A.; Mayer, F.; Coutinho, P.. "Natural selection at the MJD locus: Phenotypic diversity, survival and fertility among Machado-Joseph Disease patients from the Azores". Journal of Biosocial Science 33 3 (2001): 361-373. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034942762&partnerID=MN8TOARS.
    10.1017/S0021932001003613
  76. Lima, M.; Kay, T.; Vasconcelos, J.; Mota-Vieira, L.; Gonzalez, C.; Peixoto, A.; Abade, A.; et al. "Disease knowledge and attitudes toward predictive testing and prenatal diagnosis in families with Machado-Joseph disease from the Azores Islands (Portugal)". Community Genetics 4 1 (2001): 36-42. http://www.scopus.com/inward/record.url?eid=2-s2.0-17844362965&partnerID=MN8TOARS.
    10.1159/000051154
  77. Gaspar, C.; Lopes-Cendes, I.; Hayes, S.; Goto, J.; Arvidsson, K.; Dias, A.; Silveira, I.; et al. "Ancestral origins of the Machado-Joseph disease mutation: A worldwide haplotype study". American Journal of Human Genetics 68 2 (2001): 523-528. http://www.scopus.com/inward/record.url?eid=2-s2.0-0035125109&partnerID=MN8TOARS.
    10.1086/318184
  78. Lima, Manuela; Coutinho, Paula; Abade, Augusto; Vasconcelos, João; Mayer, Francine M.; Lima, M.; Coutinho, P.; et al. "Causes of Death in Machado-Joseph Disease : A Case-Control Study in the Azores (Portugal)". Archives of Neurology 55 10 (1998): 1341-1344. http://hdl.handle.net/10316/12868.
    10.1001/archneur.55.10.1341
  79. Lima, M.; Mayer, F.M.; Coutinho, P.; Abade, A.. "Origins of a mutation: Population genetics of Machado-Joseph disease in the Azores (Portugal)". Human Biology 70 6 (1998): 1011-1023. http://www.scopus.com/inward/record.url?eid=2-s2.0-0032404177&partnerID=MN8TOARS.
  80. Lima, M.; Mayer, F.; Coutinho, P.; Abade, A.. "Prevalence, geographic distribution, and genealogical investigation of Machado-Joseph disease in the Azores (Portugal)". Human Biology 69 3 (1997): 383-391. http://www.scopus.com/inward/record.url?eid=2-s2.0-0031172472&partnerID=MN8TOARS.
  81. Smith, Malcolm; Lima, Manuela. "Historical abandonment of children in the Azores, Portugal.". (1993): http://hdl.handle.net/10400.3/970.
Newspaper article
  1. Mafalda Sofia Bastos Raposo; Manuela Lima. "A importância das associações de doentes na investigação científica.", UAciência - Açoriano Oriental, 2022
  2. Manuela Lima. "Populações Homogéneas: uma mais-valia para os estudos biomédicos.", UAciência - Açoriano Oriental, 2018
  3. Manuela Lima. "De Mendel à genómica: a genética humana no século XXI.", UAciência - Açoriano Oriental, 2017
  4. Raposo, Mafalda; Vasconcelos, João; Lima, Manuela. "Da investigação aos ensaios clínicos : desafios e oportunidades para a doença de Machado-Joseph", 2014, http://hdl.handle.net/10400.3/5194.
  5. Manuela Lima; Mafalda Sofia Bastos Raposo; Armas, Jacome; Vasconcelos, João. "Doença de Machado-Joseph: à procura de biomarcadores moleculares.", Revista Azores Magazine, UAciência, 2013
  6. Manuela Lima. Corresponding author: Manuela Lima. "Doença de Machado-Joseph: ratinho transgénico revela alterações relacionadas com a produção de energia nas células", Revista Azores Magazine, UAciência, 2012
  7. Lima, Manuela. "Todos iguais, todos diferentes : a variabilidade genética humana.", 2010, http://hdl.handle.net/10400.3/1018.
Preprint
  1. Raposo, Mafalda; Hübener-Schmid, Jeannette; Tagett, Rebecca; Ferreira, Ana F.; Vieira Melo, Ana Rosa; Vasconcelos, João; Pires, Paula; et al. "Blood and cerebellar abundance of ATXN3 splice variants in spinocerebellar ataxia type 3/Machado-Joseph disease". 2023. http://dx.doi.org/10.1101/2023.04.22.537936.
    10.1101/2023.04.22.537936
Report
  1. Ferin, Rita; Dahmani, Yahya; Lima, Manuela; Gonçalves, Bruno; Rosário, Orlando; Gil, Ana; Dias, Emiliana; César, Rui; Pavão, Maria Leonor. 2008. Rastreio de factores de risco dominantes de aterosclerose na Ilha das Flores. http://hdl.handle.net/10400.3/709.
  2. Bettencourt, Conceição; Lima, Manuela. 2008. A doença de Machado-Joseph na Ilha das Flores : actualização de dados epidemiológicos. http://hdl.handle.net/10400.3/710.
  3. Lima, Manuela; Maciel, Mercês; Kay, Teresa; Bettencourt, Conceição; Vasconcelos, João. 2006. Doença de Machado-Joseph na ilha do Pico (Açores). http://hdl.handle.net/10400.3/727.
  4. Lima, Manuela. 1999. Difusão de genes deletérios : epidemiologia genética e genética populacional.. http://hdl.handle.net/10400.3/892.
  5. Lima, Manuela; Abade, Augusto. 1996. Genética histórica da doença de Machado-Joseph nos Açores : reconstrução genealógica das famílias afectadas da Terceira e Graciosa.. http://hdl.handle.net/10400.3/838.
  6. Lima, Manuela; Abade, Augusto; Smith, Malcolm T.. 1993. Child abandonment and illegitimacy in the Island of São Jorge (Azores-Portugal).. http://hdl.handle.net/10400.3/905.
  7. Lima, Manuela; Smith, Malcolm T.. 1992. Consanguinidade, endogamia e ilegitimidade na Freguesia de São Roque do Pico (Açores).. http://hdl.handle.net/10400.3/894.
Distinctions

Award

1988 Prémio Escolar Engenheiro Augusto Cavaco
Sondagens e Fundações A. Cavaco, LTD, Portugal

Other distinction

1997 Menção Honrosa do Prémio de Genética Médica "Jacinto de Magalhães"
Centro Hospitalar Universitário do Porto EPE Centro de Genética Médica Doutor Jacinto Magalhães, Portugal