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Identification

Personal identification

Full name
ARNALDO ANTÓNIO PINTO PEREIRA

Citation names

  • PEREIRA, ARNALDO

Author identifiers

Ciência ID
3D16-DE86-6C67
ORCID iD
0000-0003-3361-6269
Google Scholar ID
dVLIGnAAAAAJ&hl
Researcher Id
M-5278-2013
Scopus Author Id
56329176100

Email addresses

  • arnaldo@ipb.pt (Professional)

Websites

Languages

Language Speaking Reading Writing Listening Peer-review
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2023/03/23
Concluded
 Informática (Doutoramento)
Universidade de Aveiro, Portugal

Universidade do Porto, Portugal

Universidade do Minho, Portugal
"Querying and Visualisation of Semantic Data" (THESIS/DISSERTATION)
 Aprovado por unanimidade
2014/12/11
Concluded
 Sistemas de Informação (Mestrado)
Major in Sem especialização
Instituto Politécnico de Bragança Escola Superior de Tecnologia e Gestão, Portugal
"Towards robustness and self-organization of ESB-based solutions using service life-cycle management" (THESIS/DISSERTATION)
 17
2011/09/12
Concluded
 Engenharia Informática (Licenciatura)
Instituto Politécnico de Bragança, Portugal
 16
Affiliation

Science

Category
Host institution 		Employer
2017/10/01 - 2023/03/23 Researcher (Research) Universidade de Aveiro Instituto de Engenharia Electrónica e Telemática de Aveiro, Portugal
Universidade de Aveiro Instituto de Engenharia Electrónica e Telemática de Aveiro, Portugal
2011/11/15 - 2017/08/31 Researcher (Research) Instituto Politécnico de Bragança, Portugal
Instituto Politécnico de Bragança, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2023/09/18 - Current Invited Assistant (Polytechnic Teacher) Instituto Politécnico de Bragança, Portugal
Projects

Contract

Designation Funders
2017/10/01 - 2018/10/31 RD-CONNECT: An integrated platform connecting registries, biobanks and clinical bioinformatics for rare disease research
info:eu-repo/grantAgreement/EC/FP7/305444/EU
Research Fellow
Universidade de Aveiro, Portugal
 European Commission
Concluded
2015/10/01 - 2017/08/31 Production harmonizEd Reconfiguration of Flexible Robots and Machinery
info:eu-repo/grantAgreement/EC/Horizon 2020 Framework Programme/680435/EU
Research Fellow
Instituto Politécnico de Bragança, Portugal
 European Commission
Concluded
2012/09/01 - 2015/09/30 ADAPTIVE PRODUCTION MANAGEMENT
info:eu-repo/grantAgreement/EC/SEVENTH FRAMEWORK PROGRAMME/314056/EU
Research Fellow
Instituto Politécnico de Bragança, Portugal
 European Commission
Concluded
2011/11/01 - 2013/06/30 InteGration of pRocess and quAlity Control using multi-agEnt technology
info:eu-repo/grantAgreement/EC/SEVENTH FRAMEWORK PROGRAMME/246203/EU
Research Fellow
Instituto Politécnico de Bragança, Portugal
 European Commission
Concluded
Outputs

Publications

Book
  1. Pereira, A.; Almeida, J.R.; Lopes, R.P.; Pazos, A.; Oliveira, J.L.. Discovery of Biomedical Databases Through Semantic Questioning. 2022.
    10.3233/SHTI220535
  2. Rodrigues, N.; Pereira, A.; Leitão, P.. Adaptive multi-agent system for a washing machine production line. 2013.
    10.1007/978-3-642-40090-2_19
Conference paper
  1. Pereira, A.; Almeida, J.R.; Lopes, R.P.; Oliveira, J.L.. "Visualising Time-evolving Semantic Biomedical Data". 2022.
    10.1109/CBMS55023.2022.00053
  2. Pereira, A.; Lopes, R.P.; Oliveira, J.L.. "Easing the questioning of semantic biomedical data". 2021.
    10.1109/CBMS52027.2021.00044
  3. Almeida, J.R.; Fajarda, O.; Pereira, A.; Oliveira, J.L.. "Strategies to access patient clinical data from distributed databases". 2019.
  4. Antunes, R.; Silva, J.F.; Pereira, A.; Matos, S.. "Rule-based and machine learning hybrid system for patient cohort selection". 2019.
  5. Boschi, F.; Zanetti, C.; Tavola, G.; Taisch, M.; Leitao, P.; Barbosa, J.; Pereira, A.. "From key business factors to KPIs within a reconfigurable and flexible cyber-physical system". 2018.
    10.1109/ICE.2017.8279958
  6. Pereira, A.; Petrali, P.; Pagani, A.; Barbosa, J.; Leitao, P.. "Dynamic monitoring of key-performance indicators in industrial environments". 2017.
    10.1109/INDIN.2017.8104932
  7. Leitão, P.; Barbosa, J.; Pereira, A.; Barata, J.; Colombo, A.W.. "Specification of the PERFoRM architecture for the seamless production system reconfiguration". 2016.
    10.1109/IECON.2016.7793007
  8. Barbosa, J.; Dias, J.; Pereira, A.; Leitão, P.. "Engineering an ADACOR based solution into a small-scale production system". 2016.
    10.1109/ISIE.2016.7744860
  9. Ferreira, A.; Pereira, A.; Rodrigues, N.; Barbosa, J.; Leitão, P.. "Integration of an agent-based strategic planner in an enterprise service bus ecosystem". 2015.
    10.1109/INDIN.2015.7281929
  10. Leitao, P.; Barbosa, J.; Pereira, A.. "Towards robustness and self-organization of ESB-based solutions using service life-cycle management". 2014.
    10.1109/IECON.2014.7049246
  11. Pereira, A.; Rodrigues, N.; Leitão, P.. "Data collection for global monitoring and trend analysis in the GRACE multi-agent system". 2013.
    10.1109/ICIT.2013.6505851
  12. Pereira, A.; Rodrigues, N.; Barbosa, J.; Leitao, P.. "Trust and risk management towards resilient large-scale cyber-physical systems". 2013.
    10.1109/ISIE.2013.6563837
  13. Pereira, A.; Rodrigues, N.; Leitao, P.. "Deployment of multi-agent systems for industrial applications". 2012.
    10.1109/ETFA.2012.6489641
Journal article
  1. César H. Bernabé; Lieze Thielemans; Rajaram Kaliyaperumal; Claudio Carta; Shuxin Zhang; Celia W.G. van Gelder; Nirupama Benis; et al. "Building expertise on FAIR through evolving Bring Your Own Data (BYOD) workshops: describing the data, software, and management- focused approaches and their evolution". Data Intelligence (2023): http://dx.doi.org/10.1162/dint_a_00236.
    10.1162/dint_a_00236
  2. Pereira, A.; Almeida, J.R.; Lopes, R.P.; Oliveira, J.L.. "Querying semantic catalogues of biomedical databases". Journal of Biomedical Informatics 137 (2023): http://www.scopus.com/inward/record.url?eid=2-s2.0-85144612237&partnerID=MN8TOARS.
    10.1016/j.jbi.2022.104272
  3. Arnaldo Pereira; João Rafael Almeida; Rui Pedro Lopes; José Luís Oliveira. "Semantic Data Visualisation for Biomedical Database Catalogues". Healthcare (2022): https://doi.org/10.3390/healthcare10112287.
    10.3390/healthcare10112287
  4. Arnaldo Pereira; Alina Trifan; Rui Pedro Lopes; José Luís Oliveira. "Systematic review of question answering over knowledge bases". IET Software 16 1 (2022): 1-13. https://doi.org/10.1049/sfw2.12028.
    10.1049/sfw2.12028
  5. Arnaldo Pereira; Rui Pedro Lopes; José Luís Oliveira. "SCALEUS-FD: A FAIR Data Tool for Biomedical Applications". BioMed Research International 2020 (2020): 1-8. https://doi.org/10.1155/2020/3041498.
    10.1155/2020/3041498
Report
  1. Hennecke, André; PEREIRA, ARNALDO; Lee, Benjamin; Marseu, Ellina; Dimanidou, Evangelia; Boschi, Filippo; Angione, Giacomo; et al. 2017. Deliverable 6.2: Self-Adaptive Highly Modular and Flexible Assembly Demonstrator Design and Set-Up. https://web.archive.org/web/20201229174416/https://www.horizon2020-perform.eu/files/documents/D6_2_public.pdf.
  2. Hennecke, André; Rocha, André; PEREIRA, ARNALDO; Sche, Daniel; Gosewehr, Frederik; Wermann, Jeffrey; Matos, João; et al. 2017. Deliverable 2.3: Design of Standard Interfaces for Machinery, Control Systems and Data Backbone. https://web.archive.org/web/20201229174541/https://horizon2020-perform.eu/files/documents/D2_3_public.pdf.
  3. Cala, Ambra; Hennecke, André; PEREIRA, ARNALDO; Lee, Benjamin; Boschi, Filippo; Angione, Giacomo; Iuzzolino, Gregorio; et al. 2016. Deliverable 2.2: Definition of the System Architecture. http://web.archive.org/web/20201229174544/https://www.horizon2020-perform.eu/files/documents/D2_2_public.pdf.
Thesis / Dissertation
  1. "Querying and Visualisation of Semantic Data". PhD, Universidade de Aveiro, 2023. https://osf.io/spwd7.
  2. "Towards Robustness and Self-Organization of ESB-based Solutions using Service Life-cycle Management". Master, Instituto Politécnico de Bragança, 2014. http://hdl.handle.net/10198/11922.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2022/07/21 Visualising Time-evolving Semantic Biomedical Data 35th IEEE CBMS International Symposium on Computer-Based Medical Systems (CBMS 2022)
Shenzhen University (Shenzhen, China)
2021/06/08 Easing the Questioning of Semantic Biomedical Data 34th IEEE CBMS International Symposium on Computer-Based Medical Systems (CBMS 2021)
Universidade de Aveiro (Aveiro, Portugal)
2018/01/30 Multidimensional Byzantine Approximate Agreement in Cyber-Physical Systems with Trust 2018 Doctoral Symposium in Informatics Engineering (DSIE'18)
Faculdade de Engenharia da Universidade do Porto (Porto, Portugal)
2012/09/18 Deployment of Multi-agent Systems for Industrial Applications 2012 IEEE 17th International Conference on Emerging Technologies & Factory Automation (ETFA 2012)
IEEE Industrial Electronics Society and AGH University of Science and Technology (Krakow, Poland)

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2016 - 2016 XVI Portuguese Robotics Open (2016/05/04 - 2016/05/08)
Festival (Member of the Organising Committee)
 Instituto Politécnico de Bragança, Portugal

Sociedade Portuguesa de Robótica, Portugal

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2018/05/16 - 2018/05/18 Final annual meeting of the FP7 RD-Connect project in Athens
Meeting
 2018 RD-Connect Annual Partner Meeting
2017/12/18 - 2017/12/20 Advanced computing for Earth sciences
Workshop
 Workshop on Advanced Computing for Earth Sciences (ACES 2017)
Universidade do Porto, Portugal
2017/02/01 - 2017/02/02 H2020 PERFoRM (Harmonized Reconfiguration of Production of Robots and Flexible Machines) WP4/5 technical workshop in Braunschweig
Workshop
 Production harmonizEd Reconfiguration of Flexible Robots and Machinery (PERFoRM) International Project Workshop
Technische Universität Braunschweig, Germany
2016/11/24 - 2016/11/25 H2020 PERFoRM (Harmonized Reconfiguration of Production of Robots and Flexible Machines) WP2/3 technical workshop in Bragança
Workshop
 Production harmonizEd Reconfiguration of Flexible Robots and Machinery (PERFoRM) International Project Workshop
Instituto Politécnico de Bragança, Portugal
2016/11/10 - 2016/11/10 Training on financial reporting and auditing in Horizon 2020 projects
Workshop
 Relatório Financeiro e Auditoria nos projectos do Horizonte 2020
Agência Nacional de Inovação SA, Portugal
2016/07/11 - 2016/07/15 International summer school on AutomationML
Other
 2nd AutomationML Sommerschule
Otto von Guericke Universität Magdeburg, Germany
2016/05/04 - 2016/05/06 2016 International Conference on Autonomous Robot Systems and Competitions (ICARSC)
Conference
 2016 International Conference on Autonomous Robot Systems and Competitions (ICARSC)
Instituto Politécnico de Bragança, Portugal
2016/03/16 - 2016/03/16 Autonomous mobile robotics and industrial robotics demo for Escola Secundária de Amarante and Centro de Formação Profissional de Bragança students
Other
 Science education for youth
Instituto Politécnico de Bragança, Portugal
2016/03/07 - 2016/03/08 H2020 PERFoRM (Harmonized Reconfiguration of Production of Robots and Flexible Machines) WP2 technical meeting in Bragança
Meeting
 Production harmonizEd Reconfiguration of Flexible Robots and Machinery (PERFoRM) International Project Meeting
Instituto Politécnico de Bragança, Portugal
2015/12/10 - 2015/12/11 H2020 PERFoRM (Harmonized Reconfiguration of Production of Robots and Flexible Machines) WP2/4 kick-off meeting in Lisbon
Meeting
 Production harmonizEd Reconfiguration of Flexible Robots and Machinery (PERFoRM) International Project Meeting
Universidade Nova de Lisboa, Portugal
2013/07/08 - 2013/07/19 International intensive course in Robotic Systems
Other
 Erasmus+ Intensive Program in Robotic Systems
Instituto Politécnico de Bragança, Portugal
2013/06/13 - 2013/06/14 FP7 GRACE (InteGration of pRocess and quAlity Control using multi-agEnt technology) project final review meeting in Naples
Meeting
 InteGration of pRocess and quAlity Control using multi-agEnt technology (GRACE) International Project Meeting
Whirlpool Europe Srl, Italy

Università Politecnica delle Marche, Italy
2012/04/26 - 2012/04/26 Public engagement activity to promote/publicize the Polytechnic Institute of Bragança
Other
 Qualifica - Feira de Educação, Formação, Juventude e Emprego
Agência Nacional para a Qualificação e o Ensino Profissional IP, Portugal

Committee member

Activity description
Role 		Institution / Organization
2022 - 2022 Member of the Programme Committee of the 35th IEEE CBMS International Symposium on Computer-Based Medical Systems (CBMS 2022)
Member
 Shenzhen University, China
2021 - 2021 Member of the Programme Committee of the 34th IEEE CBMS International Symposium on Computer-Based Medical Systems (CBMS 2021)
Member
 Universidade de Aveiro, Portugal
2018 - 2018 Member of the Programme Committee of the 13th Doctoral Symposium in Informatics Engineering (DSIE'18)
Member
 Universidade do Porto, Portugal
2016 - 2016 Member of the Programme Committee of the 6th Workshop on Service Orientation in Holonic and Multi-Agent Manufacturing (SOHOMA'16)
Member
 Universidade Nova de Lisboa, Portugal

Conference scientific committee

Conference name Conference host
2023 - 2023 36th IEEE CBMS International Symposium on Computer-Based Medical Systems (CBMS 2023) University of L'Aquila
2022 - 2022 35th IEEE CBMS International Symposium on Computer-Based Medical Systems (CBMS 2022) Shenzhen University
2019 - 2020 15th Doctoral Symposium in Informatics Engineering (DSIE'20) Faculdade de Engenharia da Universidade do Porto
2017 - 2018 13th Doctoral Symposium in Informatics Engineering (DSIE'18) Faculdade de Engenharia da Universidade do Porto
2017 - 2017 18th Annual International Conference on Industrial Technology (ICIT 2017) University of Ontario Institute of Technology
2017 - 2017 15th International Conference on Industrial Informatics (INDIN'2017) University of Applied Sciences Emden/Leer
2017 - 2017 43rd Annual Conference of the IEEE Industrial Electronics Society (IECON17) IEEE Industrial Electronics Society
2016 - 2016 42nd Annual Conference of the IEEE Industrial Electronics Society (IECON 2016) IEEE Industrial Electronics Society
2016 - 2016 6th Workshop on Service Orientation in Holonic and Multi-Agent Manufacturing (SOHOMA'16) Universidade Nova de Lisboa
Distinctions

Award

2012 Best student of the bachelor's degree in Computer Engineering graduated in the academic year 2010/2011
Instituto Politécnico de Bragança, Portugal

Other distinction

2018 FCT PhD Scholarship for MAP-i
Fundação para a Ciência e a Tecnologia, Portugal