Personal identification

Full name
Ana Filipa Ferreira do Vale

Citation names

  • Filipa F. Vale

Author identifiers

Ciência ID
4718-00EF-4BF0
ORCID iD
0000-0003-4635-0105
Google Scholar ID
https://scholar.google.pt/citations?user=cIog-J4AAAAJ&hl=pt-PT
Researcher Id
C-3570-2013
Scopus Author Id
17136133700

Addresses

  • Faculdade de Ciências da Universidade de Lisboa. Edificio C2. Campo Grande., 1749-016, Lisboa, Lisboa, Portugal (Professional)

Websites

Knowledge fields

  • Medical and Health Sciences - Medical Biotechnology
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Natural sciences - Biological Sciences - Microbiology
Degree Classification
2017/09/01 - 2021/05/19
Concluded
Engenharia Informática (Licenciatura)
Universidade de Lisboa, Faculdade de Ciências , Portugal
16
2015/09/01 - 2017/09/02
Concluded
Bioinformática e Biologia Computacional (Mestrado)
Universidade de Lisboa, Faculdade de Ciências , Portugal
"Genomes of Helicobacter pylori prophages" (THESIS/DISSERTATION)
18
2005/01/02 - 2008/03/17
Concluded
Engenharia Biomédica (Doutoramento)
Universidade Católica Portuguesa Campus Sintra, Portugal
"Distribuição geográfica e patologias associadas à metilação do DNA genómico em Helicobacter pylori. / Geographic distribution and pathologies associated to the genomic DNA methylation in Helicobacter pylori " (THESIS/DISSERTATION)
summa cum laude
2001/01/02 - 2003/05/09
Concluded
Engenharia da Saúde (Mestrado)
Universidade Católica Portuguesa Faculdade de Engenharia, Portugal
"Tipagem de estirpes de Helicobacter pylori: os sistemas de Restrição e Modificação" (THESIS/DISSERTATION)
19
1991/09/15 - 1996/07/30
Concluded
Biologia Microbiana e Genética (Licenciatura)
Universidade de Lisboa, Faculdade de Ciências , Portugal
"Estudo molecular de patologias associadas ao cromossoma Y humano: azoospermia e reversão sexual" (THESIS/DISSERTATION)
16

Science

Category
Host institution
Employer
2019/06/17 - 2023/02/15 Researcher (Research) Universidade de Lisboa Faculdade de Farmácia, Portugal

Teaching in Higher Education

Category
Host institution
Employer
2023/02/15 - Current Assistant Professor (University Teacher) Universidade de Lisboa, Faculdade de Ciências , Portugal

Positions / Appointments

Category
Host institution
Employer
2023/07 - Current Group Leader: Pathogen Genomics and Translational Microbiology Universidade de Lisboa Instituto de Biossistemas e Ciências Integrativas, Portugal
2021/07 - 2023/06 Group Leader: Pathogen Genome Bioinformatics and Computational Biology iMed.ULisboa, Portugal

Publications

Book
  1. Vale, F.F.; Caeiro, M.F.; Matos, A.P.A.. Water as the vehicle of hepatitis a virus infection: The role of recreational and drinking water. New York, United States: Nova Science Publishers, Inc.. 2011.
Book chapter
  1. "16S Genomics for Diagnosing Invasive Bacterial Infection". Elsevier, 2021.
    10.1016/b978-0-12-818731-9.00213-5
  2. Vale, Filipa F.. "Microarrays/DNA Chips for the Detection of Waterborne Pathogens". In Methods in Molecular Biology, edited by S. J. Bourlat, 143-153. Springer New York, 2016.
    10.1007/978-1-4939-3774-5_9
  3. Vale, Filipa F.; Vítor, Jorge M. B.; Oleastro, Mónica. "Probiotics as an Alternative Therapy for Helicobacter pylori-Associated Diseases". In Helicobacter pylori Research, edited by Steffen Backert; Yoshio Yamaoka, 543-574. Springer Japan, 2016.
    10.1007/978-4-431-55936-8_24
  4. Vale, F.F.. "Helicobacter Pylori antibiotic resistance: What's next?". In Antibiotic Therapy: New Developments, edited by Allen Turner. New York, United States: Nova Science Publishers, Inc., 2013.
    Published
  5. Vale, F.F.. "Helicobacter pylori prevalence and transmission among children attending rural schools: A critical review of evidence". In Urban and Rural Schools: Problems, Solutions and Progress, 123-146. New York, United States: Nova Science Publishers, Inc., 2013.
  6. Roxo-Rosa, M.; Oleastro, M.; Filipa F. Vale. "Helicobacter pylori eradication - the alternatives beyond antibiotics". In Microbial pathogens and strategies for combating them: science, technology and education (Microbiology Book Series, number # 4), edited by A. Méndez-Vilas, 1656-1667. Badajoz, Spain: Formatex, 2013.
    Published
  7. Lucena e Vale, Maria José; Vale, Filipa. "Geographical Information Management Approaches". In Handbook of Research on ICTs and Management Systems for Improving Efficiency in Healthcare and Social Care, edited by I.M. Miranda; M. M. Cruz-Cunha, 201-222. IGI Global, 2013.
    10.4018/978-1-4666-3990-4.ch010
  8. Filipa F. Vale; M.F. Caeiro; A.P. Alves Matos. "Water as the vehicle of Hepatitis A Virus infection: the role of recreational and drinking water". edited by Leon V. Berhardt. New York, United States: Nova Science Publishers, Inc., 2012.
  9. Filipa F. Vale; Roxo-Rosa, M.; Mónica Oleastro. "Helicobacter pylori resistance to antibiotics". In Science against microbial pathogens: communicating current research and technological advances (Microbiology Book Series, number # 3), edited by A. Méndez-Vilas. Badajoz, Spain: Formatex, 2011.
    Published
  10. Vale, F.F.; A.C. Correia; B. Matos; JF Moura Nunes; A.P. Alves de Matos. "Applications of transmission electron microscopy to virus detection and identification". In Microscopy: Science, Technology, Applications and Education (Microscopy Book Series, number #4), edited by A. Méndez-Vilas; J. Díaz. Badajoz, Spain: Formatex, 2010.
    10.5772/61125
  11. Ana Pascoal; Sara Carrasqueiro; Filipa F. Vale; Ana Silva; Pedro Encarnação; Cecília Calado. "Caracterização do Estádio de inovação tecnológica em saúde em Portugal". In Os seguros de saúde privados no contexto do sistema de saúde português. Lisboa, Portugal: Associação Portuguesa de Seguros, 2009.
Conference paper
  1. Vale, Ana Filipa Ferreira do; Célia Neto; Elisabete Rodrigues; Maria João Benoliel. "Search of Cryptosporidium oocysts in treated and untreated water samples from the Lisbon area". Paper presented in International Symposium on waterborne pathogens, 2002.
Journal article
  1. Filipa F Vale; Marta Proença; Luís Tanoeiro; James G. Fox. "Prophage dynamics in gastric and enterohepatic environments: unraveling ecological barriers and adaptive transitions". (2025): https://doi.org/10.1093/ismeco/ycaf017.
    10.1093/ismeco/ycaf017
  2. Muñoz, Angela B.; Stepanian, Johanna; Solano-Gutierrez, Juan S.; Vale, Filipa F.; Trespalacios-Rangel, Alba A.. "Helicobacter pylori Infection in Colombia: Phylogeny, Resistome, and Virulome". APMIS 133 2 (2025): https://doi.org/10.1111/apm.70003.
    10.1111/apm.70003
  3. Filipa F. Vale; Richard J. Roberts; Ichizo Kobayashi; M. Constanza Camargo; Charles S. Rabkin. "Gene content, phage cycle regulation model and prophage inactivation disclosed by prophage genomics in the Helicobacter pylori Genome Project". Gut Microbes (2024): https://doi.org/10.1080/19490976.2024.2379440.
    10.1080/19490976.2024.2379440
  4. Majaliwa, Nashon D; Ismail, Muhammad; Botão, Edília; Carrilho, Carla; Victor, Regina; Dimande, Luzmira; Machatine, Sheila; et al. "Diagnostic performance of biopsy-based methods for determination of Helicobacter pylori infection in dyspeptic Mozambican patients". The Journal of Infection in Developing Countries 18 11 (2024): 1702-1708. https://doi.org/10.3855/jidc.19518.
    10.3855/jidc.19518
  5. Francisca Couto; Inês Martins; Filipa Vale; Fernanda Domingues; Mónica Oleastro; Susana Ferreira. "Insights into macrolide resistance in Arcobacter butzleri: potential resistance mechanisms and impact on bacterial fitness and virulence". Journal of Antimicrobial Chemotherapy (2024): https://doi.org/10.1093/jac/dkae287.
    10.1093/jac/dkae287
  6. Liana Cristina Melo Carneiro Costa; Maria das Graças Carvalho; Filipa F. Vale; Andreia T. Marques; Lucas Trevizani Rasmussen; Tsute Chen; Melina Barros-Pinheiro. "Helicobacter pylori in oral cavity: current knowledge". Clinical and Experimental Medicine (2024): http://dx.doi.org/10.1007/s10238-024-01474-1.
    10.1007/s10238-024-01474-1
  7. Tiago Gonçalves; Andreia T. Marques; Vera Manageiro; Luis Tanoeiro; Joana S. Vital; Aida Duarte; Jorge M.B. Vítor; et al. "Antimicrobial activity of prophage endolysins against critical Enterobacteriaceae antibiotic-resistant bacteria". International Journal of Pharmaceutics (2024): https://doi.org/10.1016/j.ijpharm.2023.123758.
    10.1016/j.ijpharm.2023.123758
  8. Kaisa Thorell; Zilia Y. Muñoz-Ramirez; Difei Wang; Santiago Sandoval-Motta; Rajiv Boscolo Agostini; Silvia Ghirotto; Roberto C. Torres; et al. "The Helicobacter pylori Genome Project: insights into H. pylori population structure from analysis of a worldwide collection of complete genomes". Nature Communications (2023): http://dx.doi.org/10.1038/s41467-023-43562-y.
    10.1038/s41467-023-43562-y
  9. Muhammad Ismail; Nashon D. Majaliwa; Filipa F. Vale; Roqueia Cumbana; José J. Sumbana; Arsénio Muchongo; Ema Nassone; et al. "Molecular detection of Helicobacter pylori and its genotypic antimicrobial resistance patterns in dyspeptic Mozambican patients". Helicobacter (2023): https://doi.org/10.1111/hel.13000.
    10.1111/hel.13000
  10. Harry A. Thorpe; Elise Tourrette; Koji Yahara; Filipa F. Vale; Siqi Liu; Mónica Oleastro; Teresa Alarcon; et al. "Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations". Nature Communications (2023): https://doi.org/10.1038/s41467-023-37302-5.
    10.1038/s41467-023-37302-5
  11. Harry A. Thorpe; Elise Tourrette; Koji Yahara; Filipa F. Vale; Siqi Liu; Mónica Oleastro; Teresa Alarcon; et al. "Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations". Nature Communications (2022): https://doi.org/10.1038/s41467-022-34475-3.
    10.1038/s41467-022-34475-3
  12. Morais, Diana; Tanoeiro, Luís; Marques, Andreia; Gonçalves, Tiago; Duarte, Aida; Matos, António; Vital, Joana; et al. "Liposomal Delivery of Newly Identified Prophage Lysins in a Pseudomonas aeruginosa Model". International Journal of Molecular Sciences 23 17 (2022): 10143. http://dx.doi.org/10.3390/ijms231710143.
    10.3390/ijms231710143
  13. Mustafa Akar; Izzet Burçin Saticioglu; Emre Karakaya; Tuba Kayman; Seçil Abay; Tevfik Solakoglu; Filipa F. Vale; Fuat Aydin. "Two novel sequence types of Helicobacter pylori strains: The first report from Turkey". Helicobacter (2022): https://doi.org/10.1111/hel.12907.
    10.1111/hel.12907
  14. Joana S. Vital; Luís Tanoeiro; Ricardo Lopes-Oliveira; Filipa F. Vale. "Biomarker Characterization and Prediction of Virulence and Antibiotic Resistance from Helicobacter pylori Next Generation Sequencing Data". Biomolecules 12 5 (2022): 691-691. https://doi.org/10.3390/biom12050691.
    10.3390/biom12050691
  15. Tanoeiro, Luís; Oleastro, Mónica; Nunes, Alexandra; Marques, Andreia T.; Duarte, Sílvia Vaz; Gomes, João Paulo; Matos, António Pedro Alves; Vítor, Jorge M. B.; Vale, Filipa F.. "Cryptic Prophages Contribution for Campylobacter jejuni and Campylobacter coli Introgression". Microorganisms 10 3 (2022): 516. http://dx.doi.org/10.3390/microorganisms10030516.
    10.3390/microorganisms10030516
  16. "Editorial: The Role of Mobile Genetic Elements in Bacterial Evolution and Their Adaptability". Frontiers in Microbiology 13 (2022): http://dx.doi.org/10.3389/fmicb.2022.849667.
    10.3389/fmicb.2022.849667
  17. Filipa F. Vale; Mónica Oleastro. Corresponding author: Filipa F. Vale. "Diagnosis of Helicobacter pylori infection". Microbiota in Health and Disease 4 3 (2022): e725.
    Published • 10.26355/mhd_20229_725
  18. Andreia T. Marques; Luís Tanoeiro; Aida Duarte; Luisa Gonçalves; Jorge M. B. Vítor; Filipa F. Vale. "Genomic Analysis of Prophages from Klebsiella pneumoniae Clinical Isolates". Microorganisms (2021): https://doi.org/10.3390/microorganisms9112252.
    10.3390/microorganisms9112252
  19. Filipa F. Vale; Jorge M.B. Vítor; Andreia T. Marques; José Miguel Azevedo-Pereira; Elsa Anes; Joao Goncalves. "Origin, phylogeny, variability and epitope conservation of SARS-CoV-2 worldwide". Virus Research 304 (2021): 198526-198526. https://doi.org/10.1016/j.virusres.2021.198526.
    10.1016/j.virusres.2021.198526
  20. Fernando T. Ogata; Vasco Branco; Filipa F. Vale; Lucia Coppo. "Glutaredoxin: Discovery, redox defense and much more". Redox Biology 43 (2021): 101975-101975. https://doi.org/10.1016/j.redox.2021.101975.
    10.1016/j.redox.2021.101975
  21. "Draft Genome Sequences of 29 Helicobacter pylori Strains Isolated from Colombia". Microbiology Resource Announcements 10 19 (2021): http://dx.doi.org/10.1128/mra.00218-21.
    10.1128/mra.00218-21
  22. Angela B Muñoz; Alba A Trespalacios-Rangel; Filipa F Vale. "An American lineage of Helicobacter pylori prophages found in Colombia". Helicobacter (2021): https://doi.org/10.1111/hel.12779.
    10.1111/hel.12779
  23. Muñoz, Angela B.; Stepanian, Johanna; Trespalacios, Alba Alicia; Vale, Filipa F.. "Bacteriophages of Helicobacter pylori". Frontiers in Microbiology 11 (2020): http://dx.doi.org/10.3389/fmicb.2020.549084.
    10.3389/fmicb.2020.549084
  24. Filipa F. Vale. "A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas.". The ISME journal (2020): https://doi.org/10.1038/s41396-020-00758-0.
    10.1038/s41396-020-00758-0
  25. Andreia T. Marques; Jorge M. B. Vítor; Andrea Santos; Mónica Oleastro; Filipa F. Vale. "Trends in Helicobacter pylori resistance to clarithromycin: from phenotypic to genomic approaches". Microbial Genomics (2020): https://doi.org/10.1099/mgen.0.000344.
    10.1099/mgen.0.000344
  26. Koji Yahara; Philippe Lehours; Filipa F. Vale. "Analysis of genetic recombination and the pan-genome of a highly recombinogenic bacteriophage species". Microbial Genomics (2019): https://doi.org/10.1099/mgen.0.000282.
    10.1099/mgen.0.000282
  27. Filipa F. Vale. "Rapid Characterization of Virulence Determinants in Helicobacter pylori Isolated from Non-Atrophic Gastritis Patients by Next-Generation Sequencing". Journal of Clinical Medicine (2019): http://dx.doi.org/10.3390/jcm8071030.
    10.3390/jcm8071030
  28. Vale, F.F.; Lehours, P.. "Relating phage genomes to helicobacter pylori population structure: General steps using whole-genome sequencing data". International Journal of Molecular Sciences 19 7 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85049047040&partnerID=MN8TOARS.
    10.3390/ijms19071831
  29. Thorell, K.; Lehours, P.; Vale, F.F.. "Genomics of Helicobacter pylori". Helicobacter 22 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85029169590&partnerID=MN8TOARS.
    10.1111/hel.12409
  30. Secka, O.; Vale, F.F.; Buissonnière, A.; Thomas, J.E.; Mégraud, F.; Lehours, P.. "Phylogeographic agreement between prophage and bacterial housekeeping genes in Helicobacter pylori strains from The Gambia". Helicobacter 22 5 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85019617565&partnerID=MN8TOARS.
    10.1111/hel.12394
  31. Raaf, N.; Amhis, W.; Saoula, H.; Abid, A.; Nakmouche, M.; Balamane, A.; Ali Arous, N.; et al. "Prevalence, antibiotic resistance, and MLST typing of Helicobacter pylori in Algiers, Algeria". Helicobacter 22 6 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85031670893&partnerID=MN8TOARS.
    10.1111/hel.12446
  32. Oleastro, M.; Rocha, R.; Vale, F.F.. "Population genetic structure of Helicobacter pylori strains from Portuguese-speaking countries". Helicobacter 22 4 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85014783694&partnerID=MN8TOARS.
    10.1111/hel.12382
  33. Vale, F.F.; Nunes, A.; Oleastro, M.; Gomes, J.P.; Sampaio, D.A.; Rocha, R.; Vítor, J.M.B.; et al. "Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins". Scientific Reports 7 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85012993364&partnerID=MN8TOARS.
    10.1038/srep42471
  34. Silva, B.; Nunes, A.; Vale, F.F.; Rocha, R.; Gomes, J.P.; Dias, R.; Oleastro, M.. "The expression of Helicobacter pylori tfs plasticity zone cluster is regulated by pH and adherence, and its composition is associated with differential gastric IL-8 secretion". Helicobacter 22 4 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85018921135&partnerID=MN8TOARS.
    10.1111/hel.12390
  35. Berthenet, E.; Sheppard, S.; Vale, F.F.. "Recent “omics” advances in Helicobacter pylori". Helicobacter 21 (2016): 14-18. http://www.scopus.com/inward/record.url?eid=2-s2.0-84982105637&partnerID=MN8TOARS.
    10.1111/hel.12334
  36. Mégraud, F.; Lehours, P.; Vale, F.F.. "The history of Helicobacter pylori: from phylogeography to paleomicrobiology". Clinical Microbiology and Infection 22 11 (2016): 922-927. http://www.scopus.com/inward/record.url?eid=2-s2.0-84995646193&partnerID=MN8TOARS.
    10.1016/j.cmi.2016.07.013
  37. Nunes, A.; Rocha, R.; Vale, F.F.; Vieira, L.; Sampaio, D.A.; Dias, R.; Gomes, J.P.; Oleastro, M.. "Genome sequencing of 10 Helicobacter pylori pediatric strains from patients with nonulcer dyspepsia and peptic ulcer disease". Genome Announcements 3 1 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84982115675&partnerID=MN8TOARS.
    10.1128/genomeA.01488-14
  38. Gomes, M.; Vieira, H.; Vale, F.F.. "Characterization, validation and application of a DNA microarray for the detection of mandatory and other waterborne pathogens". Journal of Biochemistry 158 5 (2015): 393-401. http://www.scopus.com/inward/record.url?eid=2-s2.0-84947606280&partnerID=MN8TOARS.
    10.1093/jb/mvv052
  39. Vale, F.F.; Vadivelu, J.; Oleastro, M.; Breurec, S.; Engstrand, L.; Perets, T.T.; Mégraud, F.; Lehours, P.. "Dormant phages of Helicobacter pylori reveal distinct populations in Europe". Scientific Reports 5 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84942090876&partnerID=MN8TOARS.
    10.1038/srep14333
  40. Lopes, A. I.; Vale, F. F.; Oleastro, M.. "Helicobacter pylori infection - recent developments in diagnosis". World Journal of Gastroenterology 20 28 (2014): 9299-9313.
    10.3748/wjg.v20.i28.9299
  41. Vale, F.F.; Oleastro, M.. "Overview of the phytomedicine approaches against Helicobacter pylori". World Journal of Gastroenterology 20 19 (2014): 5594-5609. http://www.scopus.com/inward/record.url?eid=2-s2.0-84901218213&partnerID=MN8TOARS.
    10.3748/wjg.v20.i19.5594
  42. De Matos, A.P.A.; Caeiro, M.F.; Vale, F.F.; Crespo, E.; Paperna, I.. "Iridovirus-like viruses in erythrocytes of lacertids from Portugal". Microscopy and Microanalysis 19 5 (2013): 1183-1189. http://www.scopus.com/inward/record.url?eid=2-s2.0-84884558387&partnerID=MN8TOARS.
    10.1017/S1431927613001773
  43. Vitoriano, I.; Vítor, J.M.B.; Oleastro, M.; Roxo-Rosa, M.; Vale, F.F.. "Proteome variability among helicobacter pylori isolates clustered according to genomic methylation". Journal of Applied Microbiology 114 6 (2013): 1817-1832. http://www.scopus.com/inward/record.url?eid=2-s2.0-84878141178&partnerID=MN8TOARS.
    10.1111/jam.12187
  44. Vale, Filipa F.; Saraiva-Pava, Kathy D.; Fontes, Magda S.C.; Vieira, Helena. "Microbiologic quality of an untreated water sample analyzed by a novel DNA chip for simultaneous detection of microorganisms". Microbiology Research 3 1 (2012): http://dx.doi.org/10.4081/mr.2012.e11.
    10.4081/mr.2012.e11
  45. Caeiro, M.F.; Costa, R.; Amorim, A.; Vale, F.F.; Ferreira, S.; Morgado, F.; De Matos, A.P.A.. "Detection of amoeba and amoeba-associated microorganisms (AAMs) from natural and hospital environments". Microscopy and Microanalysis 18 SUPPL.5 (2012): 31-32. http://www.scopus.com/inward/record.url?eid=2-s2.0-84894670927&partnerID=MN8TOARS.
    10.1017/S1431927612012810
  46. Neves, D.; Vale, F.F.; Pascoal, A.. "The profile and practice of nuclear medicine technologists in Portugal: Findings from a nationwide survey". Nuclear Medicine Communications 33 12 (2012): 1277-1286. http://www.scopus.com/inward/record.url?eid=2-s2.0-84868627457&partnerID=MN8TOARS.
    10.1097/MNM.0b013e328359d3ef
  47. De Matos, A.P.A.; Vale, F.F.; Vitor, J.M.B.. "Helicobacter pylori association with amoeba: A natural reservoir of the bacteria?". Microscopy and Microanalysis 18 SUPPL.5 (2012): 27-28. http://www.scopus.com/inward/record.url?eid=2-s2.0-84894653281&partnerID=MN8TOARS.
    10.1017/S1431927612012792
  48. De Matos, A.P.A.; Caeiro, M.F.; Vale, F.; Rebelo, M.T.; Proença, M.C.; Morgado, F.; Marschang, R.. "New iridoviruses in portuguese wild fauna". Microscopy and Microanalysis 18 SUPPL.5 (2012): 29-30. http://www.scopus.com/inward/record.url?eid=2-s2.0-84894661338&partnerID=MN8TOARS.
    10.1017/S1431927612012809
  49. Vítor, J.M.; Vale, F.F.. "Alternative therapies for Helicobacter pylori: Probiotics and phytomedicine". FEMS Immunology and Medical Microbiology 63 2 (2011): 153-164. http://www.scopus.com/inward/record.url?eid=2-s2.0-80053913276&partnerID=MN8TOARS.
    10.1111/j.1574-695X.2011.00865.x
  50. Lehours, P.; Vale, F.F.; Bjursell, M.K.; Melefors, O.; Advani, R.; Glavas, S.; Guegueniat, J.; et al. "Genome sequencing reveals a phage in Helicobacter pylori". mBio 2 6 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-84855234055&partnerID=MN8TOARS.
    10.1128/mBio.00239-11
  51. Martins, N.; Vale, F.F.; Vieira, H.. "Design and preliminary results of a DNA chip for the detection of microorganisms in water samples". Physica Status Solidi (C) Current Topics in Solid State Physics 7 11-12 (2010): 2751-2754. http://www.scopus.com/inward/record.url?eid=2-s2.0-78449241847&partnerID=MN8TOARS.
    10.1002/pssc.200983799
  52. Silva, A.M.; Vieira, H.; Martins, N.; Granja, A.T.S.; Vale, M.J.; Vale, F.F.. "Viral and bacterial contamination in recreational waters: A case study in the Lisbon bay area". Journal of Applied Microbiology 108 3 (2010): 1023-1031. http://www.scopus.com/inward/record.url?eid=2-s2.0-76449083904&partnerID=MN8TOARS.
    10.1111/j.1365-2672.2009.04503.x
  53. Vale, F.F.; Vítor, J.M.B.. "Transmission pathway of Helicobacter pylori: Does food play a role in rural and urban areas?". International Journal of Food Microbiology 138 1-2 (2010): 1-12. http://www.scopus.com/inward/record.url?eid=2-s2.0-77149139131&partnerID=MN8TOARS.
    10.1016/j.ijfoodmicro.2010.01.016
  54. Pascoal, A.; Sara Carrasqueiro; Vale F. Filipa. "Radiações em Medicina: Resultados de um Inquérito à População e a Profissionais de Saúde (Médicos), em Portugal". Acta Radiológica Portuguesa 22 (2010): 147-149. https://www.sprmn.pt/arp/acta86/sumario.html.
  55. Vale, F.F.; Mégraud, F.; Vítor, J.M.. "Geographic distribution of methyltransferases of Helicobacter pylori: Evidence of human host population isolation and migration". BMC Microbiology 9 (2009): http://www.scopus.com/inward/record.url?eid=2-s2.0-70349846105&partnerID=MN8TOARS.
    10.1186/1471-2180-9-193
  56. Vale, F.F.; Silva, A.M.; Granja, A.T.; Vale, M.J.; Vieira, H.. "Simultaneous detection of micro-organisms in water samples for future chip applications: Coliform bacteria, non-mandatory bacteria, hepatitis A virus and noroviruses". Physica Status Solidi (C) Current Topics in Solid State Physics 6 10 (2009): 2184-2189. http://www.scopus.com/inward/record.url?eid=2-s2.0-70949084361&partnerID=MN8TOARS.
    10.1002/pssc.200881703
  57. Vale, Filipa F.; Vítor, Jorge M. B.. "Genomic Methylation Status for Discrimination Among Helicobacter Species: A Bioinformatics Approach". Journal of Proteomics & Bioinformatics 01 05 (2008): 258-266. http://dx.doi.org/10.4172/jpb.1000033.
    10.4172/jpb.1000033
  58. Vale, F.F.; Encarnação, P.; Vítor, J.M.B.. "A new algorithm for cluster analysis of genomic methylation: The Helicobacter pylori case". Bioinformatics 24 3 (2008): 383-388. http://www.scopus.com/inward/record.url?eid=2-s2.0-38849176976&partnerID=MN8TOARS.
    10.1093/bioinformatics/btm621
  59. Vale, F.F.; Matos, A.P.A.; Carvalho, P.; Vtor, J.M.B.. "Helicobacter pylori phage screening". Microscopy and Microanalysis 14 SUPPL. 3 (2008): 150-151. http://www.scopus.com/inward/record.url?eid=2-s2.0-53349128312&partnerID=MN8TOARS.
    10.1017/S1431927608089721
  60. Vale, F.F.; Vítor, J.M.B.. "Genomic methylation: A tool for typing Helicobacter pylori isolates". Applied and Environmental Microbiology 73 13 (2007): 4243-4249. http://www.scopus.com/inward/record.url?eid=2-s2.0-34447520629&partnerID=MN8TOARS.
    10.1128/AEM.00199-07
Magazine article
  1. "A universidade líquida", Ensino Superior, revista do snesup, 2019, http://snesup.pt/es/66/ES66-67_final-Z.pdf.
  2. Filipa F. Vale; Granja, A.T.; Silva, A.M.; Vale, M.J.; Martins, N.; Vieira H.. "Aquachip. Uma abordagem inovadora na análise de águas: chip de DNA para detecão simultânea de microrganismos em amostras de água", Biologia e Sociedade (Revista da Ordem dos Biólogos) , 2008
Newspaper article
  1. Filipa F. Vale. "Parâmetros da qualidade da água (parte II) – Cryptosporidium / Water quality parameters (Part II) - Cryptosporidium", Jornal Águas Livres (EPAL), 2002
  2. Filipa F. Vale. "Parâmetros da qualidade da água (parte III) – Giardia / Water quality parameters (Part III) - Giardia", Jornal Águas Livres (EPAL), 2002
Thesis / Dissertation
  1. Vale, Ana Filipa Ferreira do. "Genomes of Helicobacter pylory prophages". Master, 2017. http://hdl.handle.net/10451/30376.
  2. Vale, Ana Filipa Ferreira do. "Distribuição geográfica e patologias associadas à metilação do DNA genómico em Helicobacter pylori / Geographic distribution and pathologies associated with genomic DNA methylation in Helicobacter pylori". PhD, 2008. http://hdl.handle.net/10400.14/1061.
  3. Vale, Ana Filipa Ferreira do. "Tipagem de estirpes de Helicobecter pylori : os sistemas de restrição e modificação / Typing of Helicobecter pylori strains: the restriction and modification systems". Master, 2002. http://hdl.handle.net/10400.14/898.
  4. Filipa F. Vale. "Estudo molecular de patologias associadas ao cromossoma Y humano: azoospermia e reversão sexual / Molecular study of pathologies associated with the human Y chromosome: azoospermia and sexual reversal". Degree, Fundação da Faculdade de Ciências da Universidade de Lisboa, 1996.