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Carla Novais is an Assistant Professor in the area of Microbiology at Faculty of Pharmacy, Porto University (FFUP, Portugal) and is a researcher in the Research Unit on Applied Molecular Biosciences (UCIBIO). She was graduated in Pharmaceutical Sciences in 2000 and obtained her PhD degree in Microbiology in 2005 at FFUP. She works in the field of Health Sciences, Infectious Diseases and Food Safety for >20 years. Currently she develops research on molecular epidemiology of antibiotic resistance, metals and disinfectants tolerance in Gram-positive and Gram-negative bacteria from human, animal, environment and food interface within One Health context. Her specific interests and studies have been directed to understand: a) the role of diverse ecological niches as reservoirs and spreaders of bacteria, genes and/or genetic elements with human clinical interest; b) the main factors selecting particular clonal lineages and genetic elements associated with horizontal transmission of antibiotic resistance, metals and disinfectants tolerance; c) the impact of environmental stresses on the eco-evolution of genetic platforms (e.g. plasmids, transposons and ICE) carrying genes with clinical interest or associated with bacterial success in particular environments (antibiotic resistance, biocide tolerance, virulence). She published 83 papers in international peer-reviewed indexed journals of high impact (most in quartil 1; 33 as main author; 20 as corresponding; Index H is 33; ~3862 citations; Google scholar-Carla Novais ), 6 book/book chapters, 98 GenBank sequences, technical publications, among others. She has sound international networking as demonstrated by her numerous collaborative papers with 139 different co-authors from 16 countries of European, American and African continents. She actively participated in an international consortium generating ground-breaking science (>2000 enterococci genomes were sequenced) just published in Nature Communications. She has more than 200 communications (oral and posters) and was invited as keynote speaker for 13 lectures. She has been integrated in diverse national and international projects (e.g.ACE, ERA-IB funding) as Principal Researcher or Researcher. She participated in 1 international and 6 national projects with food industry stakeholders involved. Co-editor of three special issues on antibiotic resistance and biocide tolerance and a reviewer for several national and international journals (e.g. AEM, JAC, Environm Pollution) in the field of microbiology within One Health context, antibiotic resistance and biocide tolerance. She was/is adviser/co-advisor of 5 PhD thesis, 2 Post-Doc, 7 Master thesis, >30 Graduation thesis, Student projects, ERASMUS and studies of other nature, involving students from Portugal Spain, UK and Brazil. She organized 11 national scientific events, is/was a member of "Grupo de Trabalho sobre Ocorrência Microbiológica na Cadeia Alimentar (GTOMCA)", Grupo de Trabalho sobre Toxinfecções Alimentares (GTTA), ESCMID Food- and Water-borne Infections Study Group (EFWISG), and Portuguese Quality Institute (FFUP representant). She is the supervisor of the drinking water quality analysis integrated in of FFUP community services. She was one of the founders of the experimental service-learning pedagogical MicroMundo@UPorto (involving university and school students) in Portugal through the University of Porto, concerning soil microbiota diversity and antimicrobial resistance.
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Identification

Personal identification

Full name
Carla Alexandra Novais de Oliveira e Silva
Date of birth
1976/02/17
Gender
Female

Citation names

  • Novais, Carla

Author identifiers

Ciência ID
4D1A-123E-15FD
ORCID iD
0000-0002-3826-6731
Google Scholar ID
https://scholar.google.ch/cita
Researcher Id
E-6094-2010
Scopus Author Id
8565025500

Email addresses

  • casilva@ff.up.pt (Professional)

Telephones

Telephone
  • (351) 220428588 (Professional)

Addresses

  • Lab. de Microbiologia. Faculdade de Farmácia. Universidade Porto. Edificio 3, Piso 5, Sala 27. Rua Jorge Viterbo Ferreira nº 228 , 4050--31, Porto, Porto, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Earth and Environmental Sciences
  • Agrarian Sciences - Veterinary Sciences
  • Medical and Health Sciences

Languages

Language Speaking Reading Writing Listening Peer-review
Spanish; Castilian Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
French Beginner (A1) Intermediate (B1) Beginner (A1) Intermediate (B1)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2001 - 2005
Concluded
 Microbiology (Doutoramento)
Faculdade de Farmácia da Universidade do Porto, Portugal
"Epidemiologia da resistência aos antibióticos em Enterococcus spp de origem humana, animal e ambiental (Epidemiology of antibiotic resistance in human, animal and environmental Enterococcus spp)" (THESIS/DISSERTATION)
 unanimously approved
1995 - 2000
Concluded
 Pharmaceutical Sciences (Licenciatura)
Faculdade de Farmácia da Universidade do Porto, Portugal
 16 values
Affiliation

Science

Category
Host institution 		Employer
2021 - Current Researcher (Research) Research Unit on Applied Molecular Biosciences - UCIBIO and Associate Laboratory Institute for Health and Bioeconomy - i4HB.", Portugal
2015/01 - Current Researcher (Research) Research Unit on Applied Molecular Biosciences (UCIBIO/REQUIMTE), Portugal
2004/10 - 2014/12 Researcher (Research) REQUIMTE-laboratório associado, Portugal
2001/01 - 2004/12 Researcher (Research) Fundação para a Ciência e a Tecnologia, Portugal
Faculdade de Farmácia da Universidade do Porto, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2012/09/01 - Current Assistant Professor (University Teacher) Universidade do Porto Faculdade de Farmácia, Portugal
2006/09 - 2012/08 Assistant Professor (University Teacher) Universidade Fernando Pessoa, Portugal
2001/11 - 2006/08 Assistant (University Teacher) Universidade Fernando Pessoa, Portugal

Others

Category
Host institution 		Employer
2013 - Current Service: Responsible for microbiological analysis of water for human consumption. Faculdade de Farmácia. Universidade do Porto, Portugal
2009/09 - 2009/09 International research exchange Eastman Dental Institute. University College of London., United Kingdom
Eastman Dental Institute. University College of London., United Kingdom
2000/05 - 2000/09 Technician of microbiological analysis of water for human consumption Faculdade de Farmácia. Universidade do Porto, Portugal
2000/03 - 2000/04 Internship (under the Leonardo da Vinci Program) Servicio de Microbiologia- Hospital del Aire de Madrid., Spain
Servicio de Microbiologia- Hospital del Aire de Madrid., Spain
2000/01 - 2000/02 Internship (under the Leonardo da Vinci Program) Servicio de Hematologia. Hospital del Aire de Madrid., Spain
Servicio de Hematologia. Hospital del Aire de Madrid., Spain
Projects

Contract

Designation Funders
2024 - Current Role of water used in the growing, handling and processing of fruits, vegetables and herbs on the spread of antimicrobial resistance (AMR) (Acronym: WateResist).
OC/EFSA/BIOHAW/2023/01
Researcher
European Agency of Food Safety
Ongoing
2023/01 - Current CLEANWATER: Exploring the microbial diversity of water supply systems for early detection of emerging micropollutants
2022.02124.PTDC
Principal investigator
Fundação para a Ciência e a Tecnologia
Ongoing
2023 - Current APPLE - Assessing Prevalence, Population structure and resistance mechanisms of Linezolid-resistant Enterococci - a multicenter study.
ESCMID SG Research Grant APPLE
Researcher
European Society of Clinical Microbiology and Infectious Diseases
2022 - Current Nasal colonization by Staphylococcus aureus in Health Sciences students: insights into lifestyle factors, antimicrobial resistance and virulence profiles. Approved by the Ethical Committee of IUCS (23/CE-IUCS/2022).
GI2-CESPU-2023
Researcher
Instituto Universitário de Ciências da Saúde, Portugal
 Cooperativa de Ensino Superior Politécnico e Universitário
Ongoing
2021/01/01 - 2025/12/31 Institute for Health and Bioeconomy
LA/P/0140/2020
10.54499/LA/P/0140/2020
Researcher
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal

Universidade de Lisboa Instituto de Bioengenharia e Biociências, Portugal

Universidade NOVA de Lisboa, Portugal

INESC Microsistemas e Nanotecnologias, Portugal

Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Unidade de Ciências Biomoleculares Aplicadas, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2020/01/01 - 2023/12/31 Applied Molecular Biosciences Unit
UIDB/04378/2020
10.54499/UIDB/04378/2020
Researcher
Universidade NOVA de Lisboa, Portugal

Unidade de Ciências Biomoleculares Aplicadas, Portugal

Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Universidade do Porto, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2020/01/01 - 2023/12/31 Applied Molecular Biosciences Unit
UIDP/04378/2020
10.54499/UIDP/04378/2020
Universidade NOVA de Lisboa, Portugal

Unidade de Ciências Biomoleculares Aplicadas, Portugal

Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Universidade do Porto, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2020/09/01 - 2023/08 Development and consolidation of research in the agri-food sector in Northern Portugal
NORTE- 01-0145-FEDER-000041
Researcher
Universidade do Porto, Portugal

Universidade do Minho, Portugal

Universidade de Trás-os-Montes e Alto Douro, Portugal
CCDR-N - Comissão de Coordenação e Desenvolvimento Regional do Norte
Concluded
2022/01/01 - 2023 Exploring the bacteriocinome of human Enterococcus faecium paving avenues towards multidrug-resistant infections targeted therapies
EXPL/SAU-INF/0261/2021
Researcher
Research Unit on Applied Molecular Biosciences - UCIBIO and Associate Laboratory Institute for Health and Bioeconomy - i4HB.", Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2021/09 - 2023 One Health in practice: studying the persistence of Enterobacteriaceae with zoonotic potential in poultry farms using ITM or OTM feed to prevent their transfer into the human food chain
IJUP-Empresas-2021-14-SOJA PORTUGAL
Researcher
Soja de Portugal/Universidade do Porto
Concluded
2017 - 2023 EU Consortium to study international Enterococcus faecalis genomes (5 EU partners)
ERC 742158
Researcher
UCIBIO_REQUIMTE. Faculdade de Farmácia. Universidade do Porto, Portugal
Concluded
2019/07 - 2020/12 SafestPoultry: understanding the impact of organic versus inorganic zinc and copper formulas use at farm level in the safety of marketed poultry-meat
IJUP-Empresas 2019
Researcher
Universidade do Porto e Soja de Portugal
Concluded
2019/02/01 - 2019/12/31 MicroMundo @ Uporto: an educational service-learning project for education in Microbiology.
000
Researcher
Universidade do Porto
Concluded
2016 - 2019/11 Development of a novel industrial process for safe, sustainable and higher quality foods, using biotechnology and cybernetic approach
ID: ERA-IB-16-014
Researcher
Fundação para a Ciência e a Tecnologia
Concluded
2016 - 2019/03 FOODnanoHEALTH-Qualidade e Segurança Alimentar-uma abordagem nano(tecnológica).
NORTE-01-0145-FEDER-000011
Researcher
Comissão de Coordenação da Região do Norte
Concluded
2018/02 - 2018/12 Evaluation of production or processing control practices on the microbiological quality and safety of poultry meat with focus on Salmonella
PP-IJUP2017-SOJA DE PORTUGAL
 Soja de Portugal/Universidade do Porto
Concluded
2017/01 - 2017/12 Copper tolerance in Enterococcus faecium: unveiling the activity of a multicopper oxidase encoded by cueO gene and its gene transfer to Staphylococcus aureus
0000
Principal investigator
UCIBIO_REQUIMTE. Faculdade de Farmácia. Universidade do Porto, Portugal
 REQUIMTE. Lab. de Microbiologia. Faculdade de Farmácia. Universidade Porto
Concluded
2013/09 - 2016/12 Discrimination of Salmonella non-typhoid high-risk clones by high-throughput spectroscopic techniques (MALDI-TOF and FTIR-ATR).
EFWISG Research Grant
Researcher
European Society Clinical Microbiology and Infection Diseases
Concluded
2013/09 - 2015/12 Agentes quelantes para o desenvolvimento de novas estratégias terapêuticas
QREN. REF: NORTE-07-0124-FEDER
Researcher
Comissão de Coordenação da Região do Norte
Concluded
2012/10 - 2013/12 Selection of antibiotic resistant bacteria: a role for mercury?
PP_IJUP2011 71
Principal investigator
SantanderTotta/Univ.Porto
Concluded
2012/10 - 2013/12 Resistance to biocides in Salmonella from Portugal: a multilayered approach
PP_IJUP2011 80
Researcher
SantanderTotta/Univ.Porto
Concluded
2012/10 - 2013/12 The threat of multidrug resistance bacteria to public health: when aquacultures raise more than fish
PP_IJUP2011 81
Researcher
SantanderTotta/Univ.Porto
Concluded
2010 - 2013/06 Is aquaculture raising more than fish? Detecting antimicrobial resistance in an understudied ecological niche.
PTDC/AAC-AMB/103386/2008
Researcher
Fundação para a Ciência e a Tecnologia
Ongoing
2009/01 - 2012 Influencia de los elementos de transferência genética horizontal en la selección y persistência del complejo clonal 17 de Enterococcus faecium: implicaciónes en la selección clonal de patogenos
FIS-PS09/02381
Other
Instituto de Salud Carlos III, Ministerio de Ciencia e Innovacion, Spain
Concluded
2010 - 2011 Molecular and phenotypic characteristics of the emerging Salmonella enterica serotype 4,5,12:i- (monophasic variant of S.Typhimurium) from Portugal
Proj.Pluridisciplinares da UP
Researcher
SantanderTotta/Univ.Porto
Concluded
2010 - 2011 Bacterial resistance to copper and antibiotics: two sides of the same problem in the animal production setting?
Proj. Pluridisciplinares da UP
Principal investigator
SantanderTotta/Univ.Porto
Concluded
2010 - 2011 Tracking antibiotic resistance along the Silk Road
Proj. Pluridisciplinares da UP
Researcher
SantanderTotta/Univ.Porto
Concluded
2009 - 2010 Are ready-to-eat salads an important vehicle of pathogenic and comensal bacteria resistant to antibiotics?
Projectos Pluridisciplinares 2
Researcher
SantanderTotta/Univ.Porto
Concluded
2006 - 2010 ACE-Approaches to Control multi-resistant Enterococci:Studies on molecular ecology, horizontal gene transfer, fitness and prevention
Europ. Union. LSHE-2007-037410
Researcher
European Union
Concluded
2005 - 2009 Indicators of swine industry pollution: antibiotics and antibiotic-resistant bacteria
FCT-POCTI/AMB/61814/2004
Researcher
Fundação para a Ciência e a Tecnologia
Concluded
2005 - 2009 Study of the factors implicated in the stability and dissemination of multi-resistant Enterococcus spp in different metagenomes
FCT-POCTI/SAL-ESP/61385/2004
Researcher
Fundação para a Ciência e a Tecnologia
Concluded
2002 - 2005 Biological indicators of contamination by hospital wastewaters
FCT-FSE/FEDER/ POCTI/ESP/ 3988
PhD Student Fellow
Fundação para a Ciência e a Tecnologia
Concluded

Other

Designation Funders
2003 - 2005 Daptomycin activity in Portuguese enterococci isolated from human, animal and environmental reservoirs.
Cubist Pharmaceuticals, Inc
PhD Student Fellow
Cubist Pharmaceuticals, Inc
Concluded
2002 - 2005 Linezolid activity in Portuguese enterococci isolated from human, animal and environmental reservoirs
Pharmacia Upjohn
PhD Student Fellow
Pharmacia Upjohn
Concluded
2001 - 2005 PhD project-Epidemiology of antibiotic resistance in Portuguese Enterococcus spp of human, animal and environmental origin
FCT-SFRH/BD/3372/2000
PhD Student Fellow
Fundação para a Ciência e a Tecnologia
Concluded
Outputs

Publications

Book
  1. Sousa, João Carlos; Machado, Elisabete; Novais, Carla; Peixe ,Luísa; Amorim, José M.; Monteiro, Nuno. Antibióticos- volume I. Porto: Edições Fernando Pessoa. 2016.
    Published
Book chapter
  1. Ana R. Freitas; Novais, Carla; Antunes, Patricia. "Bacteriotoxina". In Toxicologia Alimentar, edited by Nuno G. Oliveira; Ricardo Jorge Diniz Oliveira; Felix Dias Carvalho. Lidel, 2024.
    In press
  2. Novais, Carla; Freitas, Ana R.; León-Sampedro, Ricardo; Peixe, Luísa; Coque, Teresa M.. "Methods to Quantify DNA Transfer in Enterococcus". In Methods in Molecular Biology, edited by Fernando de la Cruz, 111-122. Springer US, 2020.
    Published • 10.1007/978-1-4939-9877-7_8
  3. Freitas, Ana R.; Novais, Carla; Peixe, Luísa; Coque, Teresa M.. "Isolation and Visualization of Plasmids from Gram-Positive Bacteria of Interest in Public Health". In Methods in Molecular Biology, edited by Fernando de la Cruz, 21-38. Springer US, 2020.
    Published • 10.1007/978-1-4939-9877-7_2
  4. Antunes, Patricia; Novais, Carla; Peixe, Luísa. "Food-to-Humans Bacterial Transmission". In Microbial Transmission, edited by Baquero F; Bouza E; Gutiérrez-Fuentes J; Coque TM, 161-193. --: American Society of Microbiology, 2019.
    Published • 10.1128/microbiolspec.MTBP-0019-2016
  5. Coque, Teresa M.; Freitas, Ana R.; Novais, Carla; Peixe ,Luísa; Baquero, Fernando. "Mobile Genetic Elements and Lateral Genetic Transfer in Enterococci. In: Enterococcus and Safety.". In Series: Advances in Food Safety and Food Microbiology, 0000-00000. Brasil: Nova Publishers, 2011.
    Published
Conference abstract
  1. Novais, Carla. "Food microbiology classes during confinement: flipped classroom and dynamization of online synchronous activities". Paper presented in ongresso Internacional da TOXRUN, V Congresso da Associação Portuguesa de Ciências Forenses, XIX Jornadas Científicas de Ciências do Instituto Universitário de Ciências da Saúde, Porto, 2022., 2022.
  2. Maria J. Teixeira; Ana C. Almeida-Santos; Duarte, Bárbara; Novais, Carla; Dinis-Oliveira, Ricardo Jorge; Luisa Peixe; Ana R. Freitas. "Faecal carriage of enterococci by Portuguese healthy humans: preliminary data towards accurate species identification. RevSALUS - Revista Científica Internacional Da Rede Académica Das Ciências Da Saúde Da Lusofonia". Paper presented in Congresso Internacional da TOXRUN, V Congresso da Associação Portuguesa de Ciências Forenses, XIX Jornadas Científicas de Ciências do Instituto Universitário de Ciências da Saúde, 2022.
  3. Ana R. Freitas; Ana P. Tedim; Novais, Carla; Luisa Peixe. "Comparative genomics of global linezolid-resistant Enterococcus faecalis strains unveils a chromosomal hotspot for optrA acquisition". Paper presented in ECCMID20 Abstract Book - 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID).https://www.escmid.org/fileadmin/src/media/PDFs/Abstractbook2020_05.05.2020_Part3.pdf, 2895, 2020.
    Published
  4. Liliana Finisterra; Novais, Carla; Barbara Duarte; Luisa Peixe; Ana R. Freitas. "Detection of linezolid-resistant enterococci carrying optrA and/or poxtA in raw-frozen dog foods commercialized in EU: trend or threath? Work selected for a Press Release.". Paper presented in Paper presented in ECCMID20 Abstract Book - 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID); https://www.escmid.org/fileadmin/src/media/PDFs/Abstractbook2020_05.05.2020_Part4.pdf, 4324, 2020.
    Published
  5. Novais, Carla; Ana Paula Pereira; Barbara Duarte; Patrícia Antunes; Luisa Peixe; Ana R. Freitas; Carla Novais. "Intact EfrEF operons seem essential for chlorohexidine tolerance among Enterococcus faecalis from different hosts and genetic backgrounds". Paper presented in ECCMID20 Abstract Book - 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID); https://www.escmid.org/fileadmin/src/media/PDFs/Abstractbook2020_05.05.2020_Part5.pdf, 4503, 2020.
    Published
  6. Ana R. Freitas; Elghaieb, Houyem; Novais, Carla; Barbara Duarte; Abbassi, M.S; Luisa Peixe. "Genomic characterisation of clinical Enterococcus faecium from Tunisia: remarkable identity with ampicillin-resistant strains obtained from animals/meat in the same area". Paper presented in ECCMID20 Abstract Book - 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID); https://www.escmid.org/fileadmin/src/media/PDFs/Abstractbook2020_05.05.2020_Part4.pdf, 4346., 2020.
    Published
  7. Novais, Carla; Andreia Rebelo; Barbara Duarte; Ana R. Freitas; Ana Callejón; Luisa Peixe; Carla Novais; Patricia Antunes. "Activity of peracetic acid against MDR Enterococcus faecium and non-typhoidal Salmonella from diverse epidemiological and genetic backgrounds". Paper presented in ECCMID20 Abstract Book - 30th European Congress of Clinical Microbiology and Infectious Diseases; https://www.escmid.org/fileadmin/src/media/PDFs/Abstractbook2020_05.05.2020_Part3.pdf, 2457., 2020.
    Published
  8. Mourão, Joana; Dias, Laura; Ferreira, Liliana; Alves, Tatiana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Are biocides and antibiotic resistance driving the emergence of Salmonella enterica serotype 4,[5],12:i- (monophasic variant of S. Typhimurium)?". Paper presented in 22nd European Congress Clinicial Microbiology and Infection Diseases, London, 2012.
    Published • 10.1111/j.1469-0691.2012.03802.x
  9. Silveira, Eduarda; Freitas, Ana R.; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Spread of large conjugative plasmids carrying antibiotic, copper and mercury resistance genes among Enterococcus from different sources". Paper presented in 2nd European Congress Clinical Microbiology and Infectious Diseases, London, 2012.
    Published • 10.1111/j.1469-0691.2012.03802.x
  10. Novais, Carla; Antunes, Patricia; Fonte, Joana; Campos, Joana; Silveira, Eduarda; Grosso, Filipa; Machado, Elisabete; et al. "Occurrence of antibiotic-resistant enterococci from antibiotic-free trout aquacultures". Paper presented in 22nd European Congress of Clinical Microbiology and Infectious Diseases, London, 2012.
    Published • 10.1111/j.1469-0691.2012.03801.x
  11. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Global dissemination of vancomycin-resistant VanB Enterococcus faecium causing outbreaks in different countries is mainly associated with chromosomal Tn1549/ 5382-like platforms". Paper presented in 22nd European Congress Clinical Microbiology and Infectious Diseaases, London, 2012.
    Published • 10.1111/j.1469-0691.2012.03802.x
  12. Antunes, Patricia; Campos, Joana; Novais, Carla; Machado, Elisabete; Mourão, Joana; Grosso, Filipa; Quinteira, Sandra. "Aquacultures as reservoirs of pathogenic bacteria and clinically relevant antibiotic resistance genes". Paper presented in 22nd European Congress Clinical Microbiology and Infection, London, 2012.
    Published • 10.1111/j.1469-0691.2012.03802.x
  13. Antunes, Patricia; Mourão, Joana; Alves, Tatiana; Campos, Joana; Novais, Carla; Peixe ,Luísa. "Biocides and multi-drug resistance associated with the first extended-spectrum beta-lactamase-producing nontyphoidal Salmonella strain isolated in Portugal". Paper presented in 22nd European Congress Clinical Microbiology and Infection, London, 2012.
    Published • 10.1111/j.1469-0691.2012.03803.x
  14. Freitas, Ana R.; Ruiz-Garbajosa, Patricia; Francia, Maria V.; Novais, Carla; Zervos, Marcus J.; Donabedian, Susan; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Spread of vancomycin-resistance among Enterococcus faecalis: the influence of pAD1 and Inc18-plasmids (1987-2005)". Paper presented in 21st ECCMID/27th ICC, Milan, 2011.
    Published • 10.1111/j.1469-0691.2011.03557.x
  15. Silveira, Eduarda; Freitas, Ana R.; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Co-dissemination of antibiotic and copper resistance genes in large conjugative plasmids of enterococci from different ecological niches". Paper presented in 21st ECCMID/27th ICC, Milan, 2011.
    Published • 10.1111/j.1469-0691.2011.03559.x
  16. Novais, Carla; Escada, Ricardo; Freitas, Ana R.; Silveira, Eduarda; Coque, Teresa M.; Peixe ,Luísa. "High incidence of horizontal transfer of ampicillin resistance (pbp5) among CC17 Enterococcus faecium". Paper presented in 21st ECCMID/27th ICC, Milan, 2011.
    Published • 10.1111/j.1469-0691.2011.03558.x
  17. Quinteira, Sandra; Novais, Carla; Antunes, Patricia; Campos, Joana; Freitas, Ana R.; Abdukadir, A.; Monteiro, Nuno; Peixe ,Luísa. "Tracking antibiotic resistance along the Silk Road". Paper presented in 21st ECCMID/27th ICC, Milan, 2011.
    Published • 10.1111/j.1469-0691.2011.03557.x
  18. Campos, Joana; Peixe ,Luísa; Mourão, Joana; Pires, João; Silva, Ana Cristina; Costa, Carmen; Nunes, Heloísa; et al. "Are ready-to-eat salads an important vehicle of pathogenic and comensal bacteria resistant to antibiotics?". Paper presented in 21st/27th ICC, Milan, 2011.
    Published • 10.1111/j.1469-0691.2011.03559.x
  19. Silveira. Eduarda; Freitas, Ana R.; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Co-dispersion of copper and antibiotic resistance genes among enterococci from different ecological niches, Portugal". Paper presented in 20th European Congress Clinical Microbiology Infectious Diseases, Viena, 2010.
    Published • 10.1111/j.1469-0691.2010.03239.x
  20. Novais, Carla; Freitas, Ana R.; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. "Diversity of CTn6000 among enterococci from different ecological niches". Paper presented in 20th European Congress Clinical Infectious Diseases, Viena, 2010.
    Published • 10.1111/j.1469-0691.2010.03239.x
  21. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "The Diversity of hyl plasmids among international CC17 Enterococcus faecium strains, 1992–2009". Paper presented in 20th European Congress Clinical Microbiology Infectious Diseases, Viena, 2010.
    Published • 10.1111/j.1469-0691.2010.03239.x
  22. Freitas, Ana R.; Novais, Carla; Cunha, Ana; Silveira, Eduarda; Peixe ,Luísa; Coque, Teresa M.. "Plasmid analysis of vancomycin-resistant enterococci isolates from Portuguese poultry and healthy humans". Paper presented in 20th European Congress Clinical Microbiology and Infectious Diseases, Viena, 2010.
    Published • 10.1111/j.1469-0691.2010.03239.x
  23. Freitas, Ana R.; Silva, Rosa M.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "International spread of of vancomycin-resistant Enterococcus faecium (CC17, CC5) and Enterococcus faecalis CC2 among animals and humans.". Paper presented in 19th European Congress of Clinical Microbiology and Infectious Diseases, Helsinquia, Finland, 2009.
    Published • 10.1111/j.1469-0691.2009.02858.x
  24. Freitas, Ana R.; Novais, Carla; Francia, Maria V.; Peixe ,Luísa; Coque, Teresa M.. "Plasmid analysis of vancomycin-resistant Enterococcus faecium isolates from hospitals and aquatic environments in Portugal (1996-2008).". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, Helsinquia, Finland, 2009.
    Published • 10.1111/j.1469-0691.2009.02858.x
  25. Novais, Carla; Freitas, Ana R.; Barros, Carla; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Portuguese healthy human volunteers are reservoirs of conjugative transposons associated with tetracycline and/or erythromycin resistance.". Paper presented in 19th European Congress od Clinical Microbiology and Infectious Diseases, Helsinquia, Finland, 2009.
    Published • 10.1111/j.1469-0691.2009.02858.x
  26. Novais, Carla; Freitas, Ana R.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Spread of EfcTn1 in enterococci from different ecological niches.". Paper presented in 19th European Congress of Clinical Microbiology and Infectious Diseases, Helsínquia, Finland, 2009.
    Published • 10.1111/j.1469-0691.2009.02858.x
  27. Novais, Carla; Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Characterization of Gram-positive conjugative transposons among international epidemic vancomycin-resistant isolates of Enterococcus faecalis and Enterococcus faecium.". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, Helsinquia, Finland, 2009.
    Published • 10.1111/j.1469-0691.2009.02858.x
  28. Novais, Carla; Freitas, Ana R.; Coque, Teresa M.; Nogueira, Ana; Silva, Ricardo; Dias, Ana; Sousa, JC; Peixe ,Luísa. "Portuguese piggeries as reservoir of antibiotic multi-resistant enterococci.". Paper presented in ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens, Copenhagen, Denmark, 2008.
    Published
  29. Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Novais, Carla; Jensen, Lars; Willams, Rob L.; Baquero, Fernando; Coque, Teresa M.. "Plasmid characterization of vancomycin resistant Enterococcus faecium strains from different continents (1986-2007).". Paper presented in 18th European Congress of Clinical Microbiology and Infections Diseases (ECCMID),, Barcelona, Espanha, 2008.
    Published • 10.1111/j.1469-0691.2008.02007.x
  30. Novais, Carla; Freitas, Ana R.; Moreira, Lara; Francia, Maria V.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Characterisation of Gram-positive conjugative transposons in enterococci from different sources by a multiplex-PCR assay". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases, Barcelona, 2008.
    Published • 10.1111/j.1469-0691.2008.02007.x
  31. Ricardo Magalhães; Cristina Abreu; Ricardo Silva; Luísa Peixe; Elisabete Machado; Carla Novais; João Carlos Sousa. "Contribution of drinking water for the dissemination of Gram-positive and Gram-negative bacteria harbouring antibiotic resistance genes in Portugal". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Barcelona, 2008.
    Published • 10.1111/j.1469-0691.2008.02007.x
  32. Freitas, Ana R.; Novais, Carla; Ruiz-Garbajosa, Patricia; Coque, Teresa M.; Peixe ,Luísa. "Population Structure of Enterococcus isolates from Portugal". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Barcelona, 2008.
    Published • 10.1111/j.1469-0691.2008.02007.x
  33. Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Ruiz-Garbajosa, Patricia; Novais, Carla; Zervos, Marcus J.; Baquero, Fernando; Coque, Teresa M.. "Plasmid characterization of vancomycin resistant Enterococcus faecalis strains from different continents (1989-2004)". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Barcelona, 2008.
    Published • 10.1111/j.1469-0691.2008.02007.x
  34. Novais, Carla; Freitas, Ana R.; Coque, Teresa M.; Sousa, João Carlos; Peixe ,Luísa. "Multi-drug resistant enterococci among Portuguese swine after growth promoter ban.". Paper presented in 17th European Congress of Clinical Microbiology and Infections Diseases, Munique, Alemanha, 2007.
    Published • 10.1111/j.1469-0691.2007.01732.x
  35. Novais, Carla; Freitas, Ana R.; Coque, Teresa M.; Sousa, João Carlos; Peixe ,Luísa. "Multi-drug resistant enterococci among Portuguese swine after growth promoter ban.". Paper presented in 25th International Congress of Chemotherapy, Munique, Alemanha, 2007.
    Published
  36. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Interhospital dissemination of glycopeptide resistance among enterococcal clinical isolates from Portugal is associated to spread of epidemic pMG1-like plasmids carrying diverse Tn1546 variants". Paper presented in 17th European Congress of Clinical Microbiology and Infections Diseases, Munique, Alemanha, 2007.
    Published
  37. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Interhospital dissemination of glycopeptide resistance among enterococcal clinical isolates from Portugal is associated to spread of epidemic pMG1-like plasmids carrying diverse Tn1546 variants.". Paper presented in 17th European Congress of Clinical Microbiology and Infections Diseases, Munique, Alemanha, 2007.
    Published • 10.1111/j.1469-0691.2007.01733.x
  38. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; del Grosso, Maria; Peixe ,Luísa. "European intercountry dissemination of of a glycopeptide resistant E. faecalis clone.". Paper presented in 16th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), Nice, 2006.
    Published • 10.1111/j.1470-9465.2006.12_4_1430.x
  39. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Peixe ,Luísa. "Molecular characterization of Tn1546 from enterococci isolated from Portuguese human, animal and environmental sources.". Paper presented in 16th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), Nic2, 2006.
    Published • 10.1111/j.1470-9465.2006.12_4_1431.x
  40. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Persistence of vancomycin-resistant Enterococcus faecium isolates belonging to C1 lineage in a healthy human volunteers during a 4 year period,". Paper presented in 5th European Congress of Clinical Microbiology and Infections Diseases, Copenhaga, 2005.
    Published • 10.1111/j.1469-0691.2005.clm_1133.x
  41. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Wide dissemination of enterococci highly resistant to aminoglicosides among poultry and healthy humans from Portugal". Paper presented in 15th European Congress of Clinical Microbiology and Infections Diseases., Copenhaga, 2005.
    Published • 10.1111/j.1469-0691.2005.clm_1134_01.x
  42. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Molecular characterization of vancomycin-resistant Enterococcus faecium from Portuguese hospitals". Paper presented in 15th European Congress of Clinical Microbiology and Infections Diseases, Copenhaga, 2005.
    Published • 10.1111/j.1469-0691.2005.clm_1134_01.x
  43. Novais, Carla; Coque, Teresa M.; Baquero, Fernando; Sousa, João Carlos; Peixe ,Luísa. "Local engineering and the evolution of an Enterococcus faecalis clone in three Portuguese cities during a 7-year period (1996-2002).". Paper presented in 4th European Congress of Clinical Microbiology and Infections Diseases., Praga, 2004.
    Published • 10.1111/j.1469-0691.2004.0902c.x
  44. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Activity of daptomycin against clinical and environmental Enterococci from Portugal.". Paper presented in 4th European Congress of Clinical Microbiology and Infections Diseases., Praga, 2004.
    Published • 10.1111/j.1469-0691.2004.0902f.x
  45. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Baquero, Fernando; Peixe ,Luísa. "High diversity of Tn1546 among vancomycin resistant enterococci from Portuguese human, animal and environmental sources,". Paper presented in 4th European Congress of Clinical Microbiology and Infections Diseases, Praga, 2004.
    Published • 10.1111/j.1469-0691.2004.0902c.x
  46. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Characterization of macrolide and streptogramin-resistant genes in enterococci from poultry and human samples from Portugal.". Paper presented in 13th European Congress of Clinical Microbiology and Infections Diseases., Glasgow, 2003.
    Published • 10.1046/j.1469-0691.9.s1.83.x
Conference poster
  1. Novais, Carla. "14. Gomes-Sampaio L. M., Cláudia-Ferreira A., Prata J. C., Azevedo R. M. S., Pacheco P., Campos C., Novais C., Peixe L., Dinis-Oliveira R., Coelho C., Miranda C., Quinteira S., Freitas A. R. 2023. Nasal colonization by Staphylococcus aureus in Health Sciences students and analysis of risk factors under a One Health perspective. II Toxrun International Congress 2023. 27-28 Abril 2023. Porto, Portug". 2023.
  2. Novais, Carla. "Bierge P, Sánchez-Osuna M, Pereira AP, Rabanal P, Casabella A, Espasa M, Pérez D, Francino O, De La Mària CG, Peixe L, Gasch O, Freitas AR, Pich OQ, Novais C. 2023. Genes de resistencia a ampicilina en movimiento: caracterización de un plásmido, similar al pRE25, de un aislado de Enterococcus faecium del torrente circulatório.". Paper presented in XXVI Congreso Nacional de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica., 2023.
  3. 2. Sánchez-Osuna M, Bierge P, Pereira AP, Casabella A, Espasa M, Peixe L, Gasch O, Freitas AR, Pich OQ, Novais C.. "Genomas de Enterococcus con genes pbp5 redundantes: una perspectiva evolutiva de la diseminación de la resistencia a ampicilina.". Paper presented in XXVI Congreso Nacional de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica., 2023.
  4. Magalhães M., M. Ribeiro-Almeida, J. Mourão, A. Rebelo, D. Lopes, S. Paiva, L. Peixe, Â. Novais, C. Novais, P. Antunes. "From farm-to-fork: occurrence of persistent multidrug-resistant and copper-tolerant Klebsiella pneumoniae clones in poultry farms". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca, 2023.
  5. Roer L, Kaya H, Tedim AP, Novais C, Coque TM, Peixe L, Hasman H, Hammerum AM, Freitas AR.. "In silico extended virulence profiling of Enterococcus faecium and Enterococcus lactis isolates by use of whole-genome sequencing data". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca., 2023.
  6. Mourão J, Ribeiro-Almeida M, Magalhães M, Rebelo A, Novais C, Peixe L, Novais A, Antunes P.. "In depth genomic analysis of Klebsiella pneumoniae from intensive poultry production: an understudied non-clinical setting". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca., 2023.
  7. Rebelo A, Duarte B, Ribeiro-Almeida M, Freitas AR, Almeida A, Azevedo R, Pinto E, Peixe P, Antunes P, Novais C.. "Impact of organic and inorganic copper feed in the expansion of tcrB+ multidrug-resistant Enterococcus from poultry production.". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca., 2023.
  8. Sánchez-Osuna M, Bierge P, Pereira AP, Casabella A, Espasa M., Peixe L, Gasch O, Freitas AR, Pich OQ, Novais N.. "Enterococcus genomes with redundant pbp5 genes: evolutionary insights into the ampicillin resistance dissemination.". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca, 2023.
  9. Pereira AP, Antunes P, Peixe L, Freitas AR, Novais C.. "Different growth conditions occurring in the environment affect Enterococcus spp. susceptibility to quaternary ammonium compounds". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca, 2023.
  10. Almeida-Santos AC, Duarte B, Tedim AP, Fernández-De-Bobadilla MD, Silva LM, Ramos H, Coque TM, Novais C, Freitas AR, Pei. "Characterization of vancomycin-resistant Enterococcus faecium from a central hospital over the last decade: fluctuating clones, plasmids and bacteriocins challenge classical infection control.". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca, 2023.
  11. Almeida-Santos AC, Duarte B, Teixeira MJ, Tedim AP, Novais C, Peixe L, Freitas AR. "An update on faecal carriage of Enterococcus species by healthy humans unveils E. lactis as a predominant highly bacteriocinogenic species that can harbor optrA.". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca., 2023.
  12. Bierge P, Sánchez-Osuna M, Pereira AP, Rabanal P, Casabella A, Espasa M, Pérez D, Francino O, De La Mària CG, Peixe L, G. "Ampicillin resistance genes on the move: characterization of a pRE25-like::pbp5 plasmid from a bloodstream Enterococcus faecium". Paper presented in 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Copenhaga, Dinamarca., 2023.
  13. Gomes-Sampaio L. M., Cláudia-Ferreira A., Prata J. C., Azevedo R. M. S., Pacheco P., Campos C., Novais C., Peixe L., Din. "Nasal colonization by Staphylococcus aureus in Health Sciences students and analysis of risk factors under a One Health perspective". Paper presented in II Toxrun International Congress 2023, 2023.
  14. 11Almeida-Santos A. C., Duarte B, Tedim AP, Fernández-de-Bobadilla MD, Silva LM, Ramos H, Coque TM, Carla Novais C, Frei. "Vancomycin-resistant Enterococcus faecium circulating in a Portuguese hospital (2009-2021) challenges classical infection control". Paper presented in II Toxrun International Congress 2023., 2023.
  15. Novais C. "Matos Cátia, Duarte Bárbara, Rebelo Andreia, Lopes Diana, Freitas Ana R, Valente Margarida, Tavares Carolina, Rodrigues Juliana, Peixe Luísa; Antunes Patrícia, Novais Carla. 2023. Assessment of Antimicrobial Resistance Spread in Surface Aquatic Systems: A Study of Four Rivers in North Portugal. IJUP 2023 – Encontro de Investigação Jovem, Porto, Portugal.". 2023.
  16. Novais C. "4. Magalhães, Mafalda, Ribeiro-Almeida, Marisa, Mourão, Joana, Rebelo, Andreia, Lopes, Diana, Peixe, Luísa, Novais, Ângela, Novais, Carla, Antunes, Patrícia. 2023. From farm-to-fork: occurrence of persistent multidrug-resistant and copper tolerant Klebsiella pneumoniae clones in poultry farms. IJUP 2023 – Encontro de Investigação Jovem, Porto, Portugal". 2023.
  17. Novais, Carla. "Matos Cátia, Duarte Bárbara, Rebelo Andreia, Lopes Diana, Freitas Ana R., Valente Margarida, Tavares Carolina, Rodrigues Juliana, Peixe Luísa; Antunes Patrícia, Novais Carla. 2023. Occurrence and Diversity of Antimicrobial Resistance Bacteria in Rivers of Northern Portugal. II Jornadas do Mestrado em Controlo de Qualidade. Porto, Portugal". 2023.
  18. Novais, Carla. "Matos Cátia; Magalhães António; Pereira Francisca; Duarte Bárbara; Valente Margarida; Tavares Carolina; Rodrigues Juliana; Peixe Luísa; Novais Carla; Antunes Patrícia. 2023. Assessing Gram-negative antimicrobial resistant bacteria in rivers for drinking water: a seasonal analysis. XVIII Congresso Científico AEFFUP. Porto. Portugal". 2023.
  19. Novais, Carla. "Matos Cátia; Magalhães António; Pereira Francisca; Duarte Bárbara; Freitas Ana R.; Valente Margarida; Tavares Carolina; Rodrigues Juliana; Peixe Luísa; Antunes Patrícia; Novais Carla. 2023. Uncovering seasonal variations in antimicrobial-resistant enterococcus diversity within Porto region's surface waters. XVIII Congresso Científico AEFFUP. Porto. Portugal". 2023.
  20. Novais, Carla. "Matos Cátia; Magalhães António; Pereira Francisca; Duarte Bárbara; Valente Margarida; Tavares Carolina; Rodrigues Juliana; Peixe Luísa; Novais Carla; Antunes Patrícia. 2023. Assessing Gram-negative antimicrobial resistant bacteria in rivers for drinking water: a seasonal analysis. Microbiotec’23- Congress of Microbiology and Biotechnology 2023. Covilhã, Portugal". 2023.
  21. Novais, Carla. "Matos Cátia; Magalhães António; Pereira Francisca; Duarte Bárbara; Freitas Ana R.; Valente Margarida; Tavares Carolina; Rodrigues Juliana; Peixe Luísa; Antunes Patrícia; Novais Carla. 2023. Uncovering seasonal variations in antimicrobial-resistant enterococcus diversity within Porto region's surface waters. Microbiotec’23- Congress of Microbiology and Biotechnology 2023. Covilhã, Portugal". 2023.
  22. Novais, Carla. "Andreia Rebelo, Bárbara Duarte, Marisa Almeida, Ana R. Freitas, Agostinho Almeida, Rui Azevedo, Edgar Pinto, Luísa Peixe, Patrícia Antunes, Carla Novais. 2023. Uncovering the Effects of Copper Feed Supplementation on the selection of Copper-Tolerant and Antibiotic-Resistant Enterococcus in Poultry Production for Sustainable Environmental Practices. 6th International Conference on Enterococci. P". 2023.
  23. Novais, Carla. "Paula Bierge, Miquel Sánchez-Osuna, Ana P. Pereira, Ana R. Freitas, Antonio Casabella, Luísa Peixe, Mateu Espasa, Oriol Gasch, Carla Novais, Oscar Q. Pich. 2023. Unraveling the Enigma of Cephalosporin Susceptibility in Clinical Isolates of Enterococcus faecium: Genomic and Phenotypic Characterization of Unique Strains. 6th International Conference on Enterococci. Porto, Portugal". 2023.
  24. Novais, Carla. "Ana C. Almeida-Santos, Carla Novais, J. A. Paganini, Malbert R. C. Rogers, Weizhen Xu, Rob J. L. Willems, Jukka Corander, Luísa Peixe, Ana R. Freitas, Anita C. Schürch. 2023. Genomic Insights into Enterococcus faecalis: A Comprehensive Study of Population Structure, Plasmid Distribution, and Source Associations in Portugal. 6th International Conference on Enterococci. Porto, Portugal". 2023.
  25. Novais, Carla. "Ana C. Almeida-Santos, Bárbara Duarte, Maria João Teixeira, Ana P. Tedim, Carla Novais, Luísa Peixe, Ana R. Freitas.2023. Enterococcus lactis steals the spotlight: a predominant and highly bacteriocinogenic enterococci species obtained from contemporary faecal samples of healthy humans in Portugal. 6th International Conference on Enterococci. Porto, Portugal.". 2023.
  26. Novais, Carla. "Ana P. Pereira, Patrícia Antunes, Paula Bierge, Rob J. L. Willems, Jukka Corander, Teresa M. Coque, Oscar Q. Pich, Luísa Peixe, Ana R. Freitas, Carla Novais. 2023. Unraveling Enterococcus Susceptibility to Quaternary Ammonium Compounds: genes, phenotypes, and the impact of environmental conditions. 6th International Conference on Enterococci. Porto, Portugal.". 2023.
  27. Pereira, Ana P.; Antunes, Patrícia; Willems, Rob; Corander, Jukka; Peixe, Luisa; Freitas, Ana R.; Novais, Carla. "Enterococcus spp. are susceptible to Quaternary Ammonium Compounds used in disinfection and share tolerance genes with multiple bacterial taxa". Paper presented in Dia do Laboratório de Microbiologia 2022, 2022.
  28. Rebelo, Andreia; Duarte, Bárbara; Ferreira, Carolina; Mourão, Joana; Ribeiro, Sofia; Freitas, Ana R.; Coque, Teresa M.; et al. "Chicken meat associated Enterococcus spp from 20 years apart overcomes multiple stresses of poultry production chain: antibiotics, copper and acids". Paper presented in Dia do Laboratório de Microbiologia 2022, 2022.
  29. Ana C. Almeida-Santos; Maria J. Teixeira; Duarte, Bárbara; Novais, Carla; Peixe, Luisa; Freitas, Ana R.. "Update on the faecal carriage of enterococci by Portuguese healthy humans unveils Enterococcus lactis as a predominant species". Paper presented in Dia do Laboratório de Microbiologia 2022, 2022.
  30. M. Viviana Belloso Daza; Ana C. Almeida-Santos; Ana R. Freitas; Novais, Carla; Antonia Read; Alves, Valquíria; Pier Sandro Cocconcelli; Luisa Peixe. "PCR-based differentiation of Enterococcus faecium and Enterococcus lactis for accurate clinical diagnosis". Paper presented in 13th International Meeting on Microbial Epidemiological Markers (IMMEM XIII), 2022.
  31. Ana P. Tedim; Ana C. Almeida-Santos; Val F. Lanza; Novais, Carla; Teresa M. Coque; Ana R. Freitas; Luísa Peixe. "Unveiling the potential of bacteriocins as markers of the ecology of Enterococcus faecium and Enterococcus lactis". Paper presented in 13th International Meeting on Microbial Epidemiological Markers (IMMEM XIII), 2022.
  32. Ana P. Pereira; Antunes, Patrícia; Rob J. L. Willems; Jukka Corander; Teresa M. Coque; Luísa Peixe; Ana R. Freitas; Novais, Carla. "Evolution of chlorhexidine susceptibility and of the EfrEF operon among Enterococcus faecalis from diverse environments, clones and time spans". Paper presented in Visit of Scientific Advisory Board of UCIBIO, 2022.
  33. Maria J. Teixeira; Ana C. Almeida-Santos; Barbara Duarte; Carla Novais; Dinis-Oliveira, Ricardo Jorge; Luisa Peixe; Ana R. Freitas. "Faecal carriage of enterococci by Portuguese healthy humans: preliminary data towards accurate species identification for forensic applications". Paper presented in I Congresso Internacional da TOXRUN juntamente & V Congresso Internacional da Associação Portuguesa, 2022.
  34. Marisa Ribeiro-Almeida; Tatiana Mafalda Magalhães; Joana Mourao; Sofia Paiva; Ana R. Freitas; Carla Novais; Luisa Peixe; Antunes, Patrícia. "Raw pet food: new human transmission route for Salmonella 1,4,[5],12:i:- and mcr-1 genes in Europe". Paper presented in 32nd European Congress of Clinical Microbiology and Infectious Diseases, 2022.
  35. Ana P. Pereira; Antunes, Patrícia; Luisa Peixe; Ana R. Freitas; Novais, Carla. "Good activity of quaternary ammonium compounds against multidrug-resistant Enterococcus faecium of different clonal lineages and origins". Paper presented in 32nd European Congress of Clinical Microbiology and Infectious Diseases, 2022.
  36. Paula Bierge; Ana P. Pereira; Patricia Rabanal; Antonio Casabella; Mateu Espasa; Cristina Garcia de la Mària; Luisa Peixe; et al. "Genomic characterization of Enterococcus faecium isolates with atypical antibiotic resistance and virulence profiles causing bloodstream infections". Paper presented in 32nd European Congress of Clinical Microbiology and Infectious Diseases, 2022.
  37. Ana P. Pereira; Antunes, Patrícia; Luisa Peixe; Ana R. Freitas; Novais, Carla. "Gene flow of quaternary ammonium compounds tolerance genes among Enterococcus spp. and multiple bacterial taxa". Paper presented in 13th International Meeting on Microbial Epidemiological Markers (IMMEM XIII), 2022.
  38. Ana C. Almeida-Santos; Duarte, Bárbara; Ana P. Tedim; Luís M. Silva; Helena Ramos; Coque, Teresa M.; Novais, Carla; Luisa Peixe; Ana R. Freitas. "Clonal and plasmid dynamics of vancomycin-resistant Enterococcus faecium obtained from a single hospital institution over the last 20 years". Paper presented in 13th International Meeting on Microbial Epidemiological Markers (IMMEM XIII), 2022.
  39. Ana R. FREITAS, Ana P. TEDIM, Ana C. ALMEIDA-SANTOS, Bárbara DUARTE, Houyem ELGHAIEB, Mohamed S. ABBASSI, Abdennaceur HA. "High-resolution genotyping to assist AMR-One Health monitoring: identification of MDR Enterococcus faecium strains and pbp5 genetic platforms in different sources and countries.". Paper presented in 32nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Lisboa, Portugal., 2022.
  40. Andreia Rebelo; Duarte, Bárbara; Carolina Ferreira; Ana R. Freitas; Luísa Peixe; Antunes, Patrícia; Novais, Carla. "Exploring Enterococcus susceptibility to co-occurring stresses in the poultry meat production chain: antibiotics, copper, acidic pH and peracetic acid". Paper presented in Microbiotec21, 2021.
  41. Pereira, Ana Paula; Antunes, Patrícia; Rob J. L. Willems; Jukka Corander; Luisa Peixe; Ana R. Freitas; Novais, Carla. "Quaternary Ammonium Compounds’ activity and occurrence of tolerance associated genes among Enterococcus faecalis and Enterococcus faecium from diverse origins and timespans". Paper presented in Microbiotec21, 2021.
  42. Ana R. Freitas; Liliana Finisterra; Ana P Tedim; Barbara Duarte; Novais, Carla; Luisa Peixe. "The missing link in MDR enterococci spread: detection of vanA, optrA, poxtA, cfrD and hospital-associated strains in European industrial dog food". Paper presented in 31st European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), 2021.
  43. Andreia Rebelo; Barbara Duarte; Carina Batista; Marisa Almeida; Eulália Monteiro; Beatriz Pereira; Sofia Ribeiro; et al. "Impact of organic and inorganic copper feed formulations in the selection of copper tolerant and multidrug resistant E. faecium from poultry farms and meat available to consumers". Paper presented in 31st European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), 2021.
  44. Ana P. Pereira; Barbara Duarte; Patricia Antunes; Rob Willams; Jukka Corander; Luisa Peixe; Ana R.Freitas; Novais, Carla. "Chlorhexidine And Quaternary Ammonium Compounds Activity Against Enterococcus Faecalis From Diverse Sources, Timespans and Clonal Lineages". Paper presented in World Microbe Forum, 2021.
  45. Marisa Ribeiro-Almeida; Ângela Novais; Eulália Monteiro; Sofia Ribeiro; Andreia Rebelo; Beatriz Pereira; Carina Batista; et al. "Diverse Colistin Resistant and Copper TolerantKlebsiella pneumoniae Global High-risk Clonesin Poultry Farms". Paper presented in World Microbe Forum, 2021.
  46. Novais, Carla. "Rebelo, A.; Mourão, J.; Freitas, A.R.; Coque, T.M.; Almeida, A.; Peixe, L.; Antunes, P.; Novais, C.Redundancy in ArsA proteins among enterococci makes this bacterial group a potential sentinel of arsenic pollution". Paper presented in One Health EJP Annual Scientific Meeting 2020, 2020.
  47. Andreia Rebelo; Barbara Duarte; Ana Callejón; Luísa Peixe; Novais, Carla; Patrícia Sofia Carneiro Antunes. "Peracetic Acid tolerance of MDR non-typhoidal Salmonella and Enterococcus faecium with diverse epidemiological and genetic background". Paper presented in Microbiotec 19 – Congress, 2019.
  48. Barbara Duarte; Ana P. Pereira; Ana R. Freitas; Teresa M. Coque; Henrik Hasman; Anette M. Hammerum; Patrícia Sofia Carneiro Antunes; Luisa Peixe; Novais, Carla. "Identification of 2CS-CHXT operon signature of chlorhexidine tolerance among Enterococcus faecium". Paper presented in Microbiotec 19 – Congress, 2019.
  49. Teresa Gonçalves Ribeiro; Florentina Bucur; Daniela Borda; Novais, Carla; Patrícia Antunes; Anca Nicolau; Luisa Peixe. "FT-IR spectroscopy: a tool to evaluate the impact of high-pressure processing treatments on molecular components of Listeria monocytogenes". Paper presented in Microbiotec 19 – Congress, 2019.
  50. Andreia Rebelo; Joana Mourão; Ana R. Freitas; Joana Campos; Luisa Peixe; Patrícia Antunes; Novais, Carla. "Assess of acid tolerance of non-typhoidal Salmonella and Enterococcus faecium from different epidemiological and genetic backgrounds". Paper presented in Microbiotec 19 – Congress, 2019.
  51. Patrícia Sofia Carneiro Antunes; Novais, Carla; Ângela Novais; Filipa Grosso; Teresa Gonçalves Ribeiro; Joana Mourão; Svetlana Perovic; et al. "Implementation of MicroMundo@uporto: an educacional project based on service-learning promoting antimicrobial resistance awareness among university and school students". Paper presented in Microbiotec 19 – Congress, 2019.
  52. Novais, Carla; Ana R. Freitas; Andreia Rebelo; Carolina Ferreira; Bárbara Duarte; Sofia Ribeiro; Joana Mourão; et al. "RAW CHICKEN MEAT IS A VEHICLE OF AMPICILLIN-MULTIDRUG-RESISTANT Enterococcus faecium: IS IT A ONE HEALTH PROBLEM?". Paper presented in 1º SIMPÓSIO INIAV PARA A SEGURANÇA ALIMENTAR: "RUMO À ALIMENTAÇÃO DO FUTURO", 2019.
  53. Novais, Carla. "Andreia Rebelo, Joana Mourao, Ana R. Freitas, Joana Campos, Luisa Peixe, Patricia Antunes, Carla Novais. ASSESS OF ACID TOLERANCE OF NON-TYPHOIDAL SALMONELLA AND ENTEROCOCCUS FAECIUM FROM DIFFERENT EPIDEMIOLOGICAL AND GENETIC BACKGROUNDS". Paper presented in DAY OF THE MICROBIOLOGY LABORATORY:Microbiology, Immunology and Oncobiology: Interdisciplinary approaches to control infectious diseases and cancer, 2019.
  54. Novais, Carla. "Ana P. Pereira, Ana R. Freitas, Teresa M. Coque, Henrik Hasman, Anette M.Hammerum, Patricia Antunes, Luisa Peixe, Carla Novais. IDENTIFICATION OF 2CS-CHXT OPERON SIGNATURE OF CHLORHEXIDINE TOLERANCE AMONG ENTEROCOCCUS FAECIUM". Paper presented in Day of the Microbiology Laboratory: Microbiology, Immunology and Oncobiology: Interdisciplinary approaches to control infectious diseases and cancer., 2019.
  55. Novais, Carla. "Ana R. Freitas, Carla Novais, Barbara Duarte, Luisa Peixe. A ONE HEALTH PERSPECTIVE ON THE MOLECULAR EVOLUTION OF ANTIMICROBIAL-RESISTANT ENTEROCOCCUS: BACT_DRUGS LAB@FFUP ROLE AND HIGHLIGHTS". Paper presented in DAY OF THE MICROBIOLOGY LABORATORY: Microbiology, Immunology and Oncobiology: Interdisciplinary approaches to control infectious diseases and cancer., 2019.
  56. Novais, Carla. "Patricia Antunes, Carla Novais, Angela Novais, Filipa Grosso, Teresa Ribeiro, Joana Mourao, Svetlana Perovic, Andreia Rebelo, Magdalena Ksiezarek, Ana Raquel Freitas, Luisa Peixe. IMPLEMENTATION OF MICROMUNDO@UPORTO: A PEDAGOGICAL PROJECT OF SERVICE-LEARNING FOR EDUCATION IN MICROBIOLOGY AND ANTIMICROBIAL RESISTANCE AWARENESS". Paper presented in Day of the Microbiology Laboratory: Microbiology, Immunology and Oncobiology: Interdisciplinary approaches to control infectious diseases and cancer, 2019.
  57. Ana R. Freitas; Ana P Tedim; Novais, Carla; Luísa Peixe. "Comparative genomics analysis of optrA-carrying Enterococcus faecalis strains: new insights on clonal and genetic hotspots for optrA acquisition". Paper presented in 12th International Meeting on Microbial Epidemiological Markers (IMMEM XII), 2019.
  58. Gonçalves-Ribeiro T; Bucur F; Borda D; Novais, Carla; Antunes P; Nicolau A; Bar, N; Peixe L.. "Multiple molecular components of Listeria monocytogenes affected by high pressure processing treatments: Fourier transform-infrared spectroscopy insights.". Paper presented in 8th Congress of European Microbiologists, 2019.
  59. Novais, Carla; Ferreira, Carolina; Freitas, Ana R.; Scholes, Christopher; Duarte, Bárbara; Ribeiro, Sofia; Mourão, Joana; et al. "Widespread of ampicillin-multidrug-resistant Enterococcus faecium in raw chicken meat, Portugal". Paper presented in ijup 2019 – Encontro de Investigação Jovem, 2019.
  60. Rebelo A; Mourão, J.; Freitas A. R.; Campos, J.; Peixe L.; Antunes, P.; Novais, Carla. "Comprehensive assessment of the ability of non-typhoidal salmonella and Enterococcus faecium to survive acidic environments". Paper presented in 8th Congress of European Microbiologists. Glasgow, UK., 2019.
  61. Ribeiro, Sofia; Rebelo A; Mourão, J.; Peixe L.; Novais, Carla; Antunes, P.. "Presence of non-typhoidal Salmonella adapted to diverse stresses in raw chicken meat,". Paper presented in 8th FEMS Congress of European Microbiologists, 2019.
  62. Novais, Carla; Freitas A. R.; Ferreira C; Scholes C; Duarte B; Ribeiro S; Mourão, J.; Rebelo A; Antunes P. "High rates of ampicillin multidrug-resistant Enterococcus faecium in chicken meat from Portugal.". Paper presented in 29th the European Congress of Clinical Microbiology and Infectious Diseases, 2019.
  63. Freitas A.R. ; Tedim, AP; Lanza, V F; Novais, Carla; Coque T. M; Peixe L.. "Towards the elucidations of bacteriocins role in the shaping of ecology and evolution of Enterococcus faecium". Paper presented in 9th the European Congress of Clinical Microbiology and Infectious Diseases, 2019.
  64. Duarte B; Pereira AP; Freitas, A. R.; Coque T. M; Hasman H; Hammerum AM; Antunes P; Peixe L.; Novais C. "Identification of a conserved operon in chlorhexidine tolerant Enterococcus faecium from different clades and origins". Paper presented in 29th the European Congress of Clinical Microbiology and Infectious Diseases, Amsterdam, Netherlands., 2019.
  65. Oliveira E; Freitas AR; Novais, Carla; Peixe L; Melo AC. "Silent clonal spread of vancomycin-resistant Enterococcus faecalis colonising hospitalised patients in different health institutions of Natal, Brazil.". Paper presented in 29th the European Congress of Clinical Microbiology and Infectious Diseases, Amsterdam, Netherlands., 2019.
  66. Ribeiro S; Mourão J.; Rebelo A; Novais, Carla; Peixe L.; Antunes P. "Detection of Salmonella serotypes adapted to diverse stresses in poultry meat at the processing level in Portugal.". Paper presented in 29th the European Congress of Clinical Microbiology and Infectious Diseases, Amsterdam, Netherlands., 2019.
  67. Pereira, Ana P.; Freitas, Ana R.; Antunes, Patricia; Duarte, Bárbara; Coque, Teresa M.; Peixe, Luísa; Novais, Carla. "Chlorhexidine has a good activity against multidrug-resistant Enterococcus faecium from human, animal and environmental origins". Paper presented in IJUP2018, 2018.
  68. Freitas, Ana R.; Dilek, Aziz R.; Peixe, Luísa; Novais, Carla. "Dissemination of ST22 Staphylococcus epidermidis with stable high-level resistance to linezolid and tedizolid in the Greek-Turkish region (2008-2016)". Paper presented in 28th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  69. Elghaieb, Houyem; Abbassi, Mohamed Salah; Novais, Carla; Hassen, Abdennaceur; Freitas, Ana R.; Peixe, Luísa. "From Tunisia, the must have link: food of animal origin carrying clinically relevant MDR enterococci". Paper presented in 28th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  70. Pereira, Ana P.; Freitas, Ana R.; Antunes, Patrícia; Duarte, Bárbara; Coque, Teresa M.; Peixe, Luísa; Novais, Carla. "Activity of chlorhexidine against Enterocccus faecium from different origins, clonal lineages and antibiotic resistance phenotypes". Paper presented in 28th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  71. Rebelo, Andreia; Mourão, Joana; Freitas, Ana R.; Silveira, Eduarda; Coque, Teresa M.; Peixe, Luísa; Antunes, Patricia; Novais, Carla. "Widespread of copper, mercury and arsenic tolerance genes among multidrug resistant Enterococcus spp. from human, animal and environmental origins". Paper presented in 29th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  72. Novais, Carla; Freitas, Ana R.; Pereira, Ana P.; Duarte, Bárbara; Coque, Teresa M.; Peixe, Luísa. "Improved methodological conditions that accurately detect Enterococcus faecium with low-level ampicillin resistance". Paper presented in 29th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  73. Barone, ME; Ayala, J; León-Sampedro, Ricardo; Tedim-Pedrosa, Ana; Novais, Carla; Freitas, Ana R.; Peixe, Luísa; et al. "PBP profiles of Ampicillin Resistant Enterococcus raffinosus". Paper presented in 28th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  74. León-Sampedro, Ricardo; Barone, ME; Tedim-Pedrosa, Ana; Ayala, J; Freitas, Ana R.; Novais, Carla; Peixe, Luísa; et al. "Comparative genomics of emerging MDR Enterococcus raffinosus causing hospital outbreaks in European countries". Paper presented in 28th European Congress of Clinical Microbiology & Infectious Diseases, 2018.
  75. León-Sampedro, Ricardo; Barone, ME; Tedim-Pedrosa, Ana; Ayala, J; Freitas, Ana R.; Novais, Carla; Peixe, Luísa; et al. "Comparative genomics of emerging MDR Enterococcus raffinosus causing hospital outbreaks in European countries". Paper presented in 5th International Conference on Enterococci, 2018.
  76. Ribeiro, Sofia; Mourão, Joana; Rebelo, Andreia; Novais, Carla; Peixe, Luísa; Antunes, Patricia. "LOW DETECTION OF SALMONELLA IN A POULTRY MEAT PROCESSING UNIT IN THE NORTH OF PORTUGAL". Paper presented in 5º Simpósio Nacional “Promoção de uma Alimentação Saudável e Segura – SPASS 2018, 2018.
  77. Novais, Carla; Freitas, A. R.; Pereira, Ana; Duarte, Bárbara; Mendes, Flávia; Coque, Teresa M.; Peixe, L.. "What are we missing when epidemiological cut-off are not used to evaluate ampicillin phenotypes among Enterococcus faecium?". Paper presented in 27th European Congress of Clinical Microbiology and Infectious Diseases, 2017.
  78. Freitas, A. R.; Tedim, Ana P.; Novais, Carla; Coque, Teresa M.; Peixe, Luísa. "What predicts the safety of an Enterococcus faecium strain? Elucidative data about genetic markers associated with an increased risk of human infection". Paper presented in 27th European Congress of Clinical Microbiology and Infectious Diseases, 2017.
  79. Freitas, Ana R.; Elghayeb, Houyem; Novais, Carla; Aguiar, Sara; Coque, Teresa M.; Abbassi, Mohamed S.; Peixe, L.. "Wide screening of oxazolidinone and phenicol resistance genes in Enterococcus reveals common optrA drivers in different continents". Paper presented in 27th European Congress of Clinical Microbiology and infectious Diseases, 2017.
  80. Freitas, Ana R.; Novais, Carla; Duarte, Bárbara; Pereira, Ana; Martins, Bárbara; Peixe, Luísa. "A call to action in Long-Term Care Facilities: high rates of colonization with ampicillin and vancomycin-resistant Enterococcus faecium hospital strains". Paper presented in 27th European Congress of Clinical Microbiology and Infectious Diseases, 2017.
  81. Mourão, Joana; Rebelo, Andreia; Machado, Jorge; Almeida, Agostinho; Peixe, L.; Novais, Carla; Antunes, P.. "ARSENIC TOLERANCE GENES ARE FREQUENT AMONG SALMONELLA PIG-ASSOCIATED CLINICALLY-RELEVANT CLONES". Paper presented in 7th Congress of European Microbiologists-FEMS 2017, 2017.
  82. Mourão, Joana; Rebelo, Andreia; Freitas, Ana R.; Coque, Teresa M.; Almeida, Agostinho; Peixe, L.; Antunes, P.; Novais, Carla. "SPREAD OF VARIABLE ARSENIC TOLERANCE GENES AMONG ENTEROCOCCUS SPP FROM DIFFERENT HOSTS, ENVIRONMENTS AND GEOGRAPHICAL REGIONS (<1906-2015)". Paper presented in FEMS 2017, 2017.
  83. León-Sampedro, Ricardo; San Millán, A; Novais, Carla; Peixe, Luísa; Baquero, Fernando; Coque, Teresa M.. "A NOVEL CONJUGATIVE ELEMENT COMPOSED OF TN5801 AND A NEW TRANSPOSON: TRANSFER DYNAMICS BETWEEN ENTEROCOCCUS FAECALIS POPULATIONS". Paper presented in FEMS 2017, 2017.
  84. Freitas, Ana R.; Dilek, Aziz R.; Peixe, L.; Novais, Carla. "FIRST DESCRIPTION OF METHICILLIN-LINEZOLID RESISTANT STAPHYLOCOCCUS EPIDERMIDIS WITHOUT PREVIOUS LINEZOLID EXPOSURE, TURKISH EAST BLACKSEA REGION 2016". Paper presented in FEMS 2017, 2017.
  85. León-Sampedro, Ricardo; Martins, Elsa; Del Campo, Rosa; Rodriguez-Baños, Mercedes; Tedim-Pedrosa, Ana; Pozuelo, MJ; Peixe, L.; et al. "ENTEROCOCCUS FAECALIS IN SPANISH WILD AND MIGRATORY BIRDS: FROM POPULATION STRUCTURE TO ACCESSORY GENOME". Paper presented in FEMS 2017, 2017.
  86. Novais, Carla; Freitas, Ana R.; Pereira, Ana; Duarte, Bárbara; Mendes, Flávia; Coque, Teresa M.; Peixe, Luísa. "Comparison of EUCAST and CLSI guidelines to evaluate ampicillin phenotypes among Enterococcus faecium: what are we missing?". Paper presented in IJUP2017, 2017.
  87. Freitas, Ana R.; Novais, Carla; Duarte, Bárbara; Pereira, Ana; Martins, Bárbara; Peixe, L.. "Hi gh rates of colonization with ampicillin and vancomycin resistant Enterococcus faecium hospital strains in residents from long - term care facilities". Paper presented in IJUP 2017, 2017.
  88. Freitas, Ana R.; Tedim, Ana P.; Novais, Carla; Coque, Teresa M.; Peixe, Luísa. "DISTRIBUTION OF PUTATIVE VIRULENCE MARKERS IN ENTEROCOCCUS FAECIUM: TOWARDS A SAFETY PROFILE REVIEW". Paper presented in Microbiotec 2017, 2017.
  89. Mourão, Joana; Rebelo, Andreia; Machado, Jorge; Almeida, Agostinho; Peixe, Luísa; Antunes, Patricia; Novais, Carla. "Unveiling the contribution of ars operon for arsenic tolerance among clinically-relevant Salmonella serotypes/clones.". Paper presented in Microbiotec 2017, 2017.
  90. Rebelo, Andreia; Mourão, Joana; Freitas, Ana R.; Coque, Teresa M.; Almeida, Agostinho; Peixe, Luísa; Antunes, Patricia; Novais, Carla. "Distribution of Arsenic Tolerance Genes (arsA) among Enterococcus spp. from different sources, continents and timeframes (<1906-2015).". Paper presented in Microbiotec 2017, 2017.
  91. Leon, Ricardo; Martins, Elsa; Del Campo, Rosa; Rodriguez-Baños, M; Tedim-Pedrosa, Ana; Francia, M. V.; Pozuelo, MJ; et al. "Multilevel antimicrobial resistance (antibiotic, biocide and heavy metal) and plasmid diversity in Enterococcus faecalis from wild and migratory birds". Paper presented in 26th ECCMID, 2016.
  92. Freitas, Ana R.; Novais, Carla; Read, Antónia; Alves, Valquíria; Peixe ,Luísa. "Emergence of linezolid-resistant Enterococcus faecium in Portugal associated with co-infection of antibiotic-resistant variants of an ST117 strain". Paper presented in 26th ECCMID, 2016.
  93. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Aguiar, Sara; Martins, Elsa; Peixe ,Luísa. "Virulence characterization of international Enterococcus faecium from diverse sources (1986-2014): unveiling specific markers of hospital isolates". Paper presented in 26th ECCMID, 2016.
  94. Campos, Joana; Mourão, Joana; Silveira L; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Extended-spectrum cephalosporin resistance and plasmid-mediated quinolone resistance in emerging Salmonella serotypes from traded food products in Portugal". Paper presented in 26th ECCMID, 2016.
  95. Freitas, Ana R.; Sousa, Clara; Bavlovic Jan; Silva, Liliana; Novais, Carla; Coque, Teresa M.; Lopes João; Peixe ,Luísa. "Discrimination of vancomycin-resistant Enterococcus faecium clones by MLST (eBURST/BAPS) and spectroscopic techniques (MALDI-TOF MS and FTIR-ATR)". Paper presented in 11th International Meeting on Microbial Epidemiological Markers (IMMEM XI), 2016.
  96. Campos, Joana; Mourão, Joana; Silveira L; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Clonal dynamics of diverse Salmonella enterica serotypes from traded food products in Portugal". Paper presented in 11th International Meeting on Microbial Epidemiological Markers (IMMEM XI), 2016.
  97. Sanchez-Valenzuela, Antonio; Novais, Carla; Rodriguez-Baños, Mercedes; Delgado-Blas, J; Tedim-Pedrosa, Ana; Ripoll, Aida; Morales, Eva; et al. "Mercury resistance (merA) among Enterococcus from children exposed to metal contamination". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases, 2015.
  98. Novais, Carla; Martins, Elsa; Dias, Ana Rita; Gonçalves-Ribeiro T; Freitas, Ana R.; Antunes, Patricia; Peixe ,Luísa. "Tracking ampicillin resistant Enterococcus faecium in non-clinical settings from Angola". Paper presented in 25th European Congress Clinical Microbiology and Infectious Diseases, 2015.
  99. Mourão, Joana; Marçal, Sara; Ramos, Paula; Campos, Joana; Novais, Carla; Machado, Jorge; Peixe ,Luísa; Antunes, Patricia. "Dispersion of acquired copper and silver tolerance genes among Salmonella non-typhoid serotypes mostly belonging to widespread multidrug resistant clones". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases, 2015.
  100. Campos, Joana; Marçal, Sara; Mourão, Joana; Machado, Jorge; Novais, Carla; Antunes, Patricia; Peixe ,Luísa. "Salmonella Typhimurium ciprofloxacin resistant from young children with the concomitant presence of aac6´-Ib-cr and oqxAB in IncHI2 plasmid, a first description in Europe". Paper presented in 25th European Congress Clinical Microbiology and Infectious Diseases, 2015.
  101. Campos, Joana; Marçal, Sara; Mourão, Joana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Clonal dynamics of clinically relevant multidrug-resistant Salmonella Typhimurium, S. 4,[5],12:i:- and S. Rissen in the last decade". Paper presented in 25th European Congress Clinical Microbiology and Infectious Diseases, 2015.
  102. Campos, Joana; Marçal, Sara; Mourão, Joana; Machado, Jorge; Novais, Carla; Antunes, Patricia; Peixe ,Luísa. "First description in europe of a ciprofloxacin resistant Salmonella Typhimurium harbouring aac6´-ib-cr and oqxAB in an incHI2 plasmid". Paper presented in 6th Congress of European Microbiologists, 2015.
  103. Mourão, Joana; Marçal, Sara; Campos, Joana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Clonal dynamics of clinically-relevant multidrug resistant Salmonella enterica serotype 4,[5],12:i:- circulating in Europe in the last decade". Paper presented in 6th Congress of European Microbiologists, 2015.
  104. Sanchez-Valenzuela, Antonio; Silveira, Eduarda; Freitas, Ana R.; Antunes, Patricia; Baquero, Fernando; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Seven merA alleles are spread among enterococci from diferent species, environments and clonal backgrounds (1926-2012)". Paper presented in 6th Congress of European Microbiologists, 2015.
  105. Pereira, Vânia; Novais, Carla; Ferreira, Isabel; Casal, Susana. "Canned Tuna with Vegetables: Nutritional Characteristics and Quality Evolution After Opening". Paper presented in IJUP- Encontro da investigação jovem da Universidade do Porto 2015, 2015.
  106. Mourão, Joana; Campos, Joana; Marçal, Sara; Ramos, Paula; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Co-Transfer of Copper Tolerance and Antibiotic Resistance among Salmonella Non-Typhoid from different Serotypes and Clones". Paper presented in ICAAC/ICC 2015, 2015.
  107. Mourão, Joana; Rae, Jennifer; Silveira, Eduarda; Freitas, Ana R.; Coque, Teresa M.; Peixe ,Luísa; Antunes, Patricia; Novais, Carla. "Relevance of tcrYAZB operon acquisition for Enterococcus survival at high copper concentrations under anaerobic conditions". Paper presented in MicroBiotec 2015, 2015.
  108. Campos, Joana; Mourão, Joana; Marçal, Sara; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Primeira descrição na Europa de Salmonella Typhimurium resistente à ciprofloxacina com presença dos genes oqxAB e aac(6´)-Ib-cr". Paper presented in 8ª Reunião Anual PortFIR, 2015.
  109. Freitas, Ana R.; Novais, Carla; Read, Antónia; Alves, Valquíria; Peixe ,Luísa. "Emergence of linezolid-resistant Enterococcus faecium in Portugal". Paper presented in MicroBiotec 2015, 2015.
  110. Freitas, Ana R.; Martins, Elsa; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Extended Virulence Profile of Enterococcus faecium from Swine (Europe/USA, 1995-2008)". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases, 2014.
  111. Antunes, Patricia; Campos, Joana; Mourão, Joana; Margalho, L.; Gonçalves-Ribeiro T; Novais, Carla; Peixe ,Luísa. "UNUSUAL NON-TYPHOIDAL SALMONELLA SEROTYPES DISPERSED IN ANIMALS AND ENVIRONMENTAL SOURCES IN ANGOLA". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases, 2014.
  112. Silveira, Eduarda; Freitas, Ana R.; Barros, Mariana; Pinto, Helena; Antunes, Patricia; Marçal, Sara; Ramos, Paula; et al. "Selection of antibiotic resistant bacteria: a role for mercury?". Paper presented in 7º Encontro Investigação Jovem da Universidade do Porto, 2014.
  113. Mourão, Joana; Ramos, Paula; Marçal, Sara; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Resistance to biocides in Salmonella from Portugal: a multilayered approach". Paper presented in 7º Encontro Investigação Jovem Universidade do Porto, 2014.
  114. Campos, Joana; Mourão, Joana; Pereira, Joana; Mesquita, Ana; Maques, Maria Candida; Novais, Carla; Antunes, Patricia; Peixe ,Luísa. "The threat of multidrug resistance bacteria to public health: when aquacultures raise more than fish". Paper presented in 7º Encontro Investigação Jovem da Universidade do Porto, 2014.
  115. Mourão, Joana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Diverse Salmonella non-typhoid antibiotic-resistant clonal lineages are tolerant to copper and silver metals". Paper presented in 24th European Congress Clinical Microbiology and Infectious Diseases, 2014.
  116. Leon, Ricardo; Tedim-Pedrosa, Ana; Del Campo, Rosa; Novais, Carla; Freitas, Ana R.; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Plasmid diversity among Enterococcus faecalis of different origins, including migratory birds, farm animals and humans". Paper presented in 24th European Congress Clinical Microbiology and Infectious Diseases, 2014.
  117. Pereira, Vânia; Novais, Carla; Ferreira, Isabel; Casal, Susana. "Avaliação da qualidade de conservas de atum após abertura". Paper presented in 7ª Reunião Anual PortFIR, 2014.
  118. Antunes, Patricia; Campos, Joana; Mourão, Joana; Gonçalves-Ribeiro T; Novais, Carla; Peixe ,Luísa. "Animais e fontes ambientais em Angola, um hot-spot de diversidade populacional de Salmonella não-tifóide?". Paper presented in 7ª Reunião Anual PortFIR, 2014.
  119. Marques, Patrice; Silveira, Eduarda; Barros, Mariana; Freitas, Ana R.; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Co-mobilization of quaternary ammonium compounds and antibiotic resistance genes among bacteria – a matter of concern?". Paper presented in IJUP- 6º Encontro da Investigação Jovem da Universidade do Porto, 2013.
  120. Pereira, Joana; Campos, Joana; Mourão, Joana; Barros, Mariana; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Antibiotic resistant bacteria in aquaculture rainbow trouts: a new threat in the food chain?". Paper presented in IJUP- 6º Encontro da Investigação Jovem da Universidade do Porto, 2013.
  121. Pereira, Joana; Campos, Joana; Mourão, Joana; Barros, Mariana; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Aquaculture rainbow trouts are contaminated with multidrug-resistant Enterobacteriaceae species carrying clinically relevant antibiotic resistance genes". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  122. Antunes, Patricia; Campos, Joana; Mourão, Joana; Pereira, Joana; Novais, Carla; Peixe ,Luísa. "Contribution of trout farms to the spread of Enterobacteriaceae carrying plasmid-mediated quinolone resistance genes". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  123. Mourão, Joana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Emergence of Salmonella non-typhoid multidrug resistant clones: a role for metals". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  124. Novais, Carla; Leon, Ricardo; Freitas, Ana R.; Tedim-Pedrosa, Ana; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Spread of CTn5801 among enterococcal species from different origins". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  125. Barros, Mariana; Peixe ,Luísa; Novais, Carla. "Emergence of linezolide resistant Staphylococcus epidermidis in Portugal: description of the first cases". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  126. Freitas, Ana R.; Novais, Carla; Tedim-Pedrosa, Ana; Francia, Maria V.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Microevolutionary Events Involving Narrow Host Plasmids Influences Local Fixation of Vancomycin-Resistance in Enterococcus". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  127. Silveira, Eduarda; Marques, Patrice; Barros, Mariana; Freitas, Ana R.; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "First description of a multidrug-resistant ST17 Enterococcus faecium carrying a conjugative Inc18-like: qacH plasmid". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  128. Barros, Mariana; Antunes, Patricia; Pereira, Joana; Campos, Joana; Silveira, Eduarda; Freitas, Ana R.; Peixe ,Luísa; Novais, Carla. "From markets to fork: rainbow trouts with Enterococcus carrying virulence factors, antibiotic and biocide resistance genes". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  129. Gonçalves, Teresa; Novais, Ângela; Novais, Carla; Silva, Ricardo; Sousa, João Carlos; Peixe ,Luísa; Machado, Elisabete. "High diversity of qnrB genes in Citrobacter freundii complex isolates from an aquatic source". Paper presented in 23rd European Congress of Clinical Microbiology and Infectious Diseases, 2013.
  130. Antunes, Patricia; Campos, Joana; Mourão, Joana; Pereira, Joana; Novais, Carla; Peixe ,Luísa. "Aquacultures as reservoirs of plasmid-mediated quinolone resistance genes". Paper presented in MicroBiotec''13, 2013.
  131. Mourão, Joana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Emergence of Salmonella enterica serotype 4,5,12:i- (monophasic variant of S. Typhimurium) is associated with the spread of three clones carrying antibiotic and metal resistance genes". Paper presented in 10th International Meeting on Microbial Epidemiological Markers (IMMEM-10), 2013.
  132. Mourão, Joana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Are metals driving the emergence of Salmonella non-typhoid multidrug resistant clones?". Paper presented in Microbiotec '013, 2013.
  133. Mendes, Marlene; Novais, Carla; Antunes, Patricia; Campos, Joana; Freitas, Ana R.; Abdukadir, A.; Peixe ,Luísa; Monteiro, Nuno; Quinteira, Sandra. "Tracking antibiotic resistance along the Silk Road". Paper presented in IJUP'12. Investigação Jovem da U. Porto, 2012.
  134. Dias, Laura; Silveira, Eduarda; Antunes, Patricia; Freitas, Ana R.; Peixe ,Luísa; Novais, Carla. "Bacterial resistance to copper and antibiotics: two sides of the same problem in the animal production setting?". Paper presented in IJUP'12. Investigação Jovem da U. Porto, 2012.
  135. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Global dissemination of vancomycin-resistant VanB Enterococcus faecium causing outbreaks in different countries is mainly associated with chromosomal Tn1549/5382-like platforms". Paper presented in 22nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2012.
  136. Mourão, Joana; Dias, Laura; Ferreira, Liliana; Alves, Tatiana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Are biocides and antibiotic resistance driving the emergence of Salmonella enterica serotype 4,[5],12:i- (monophasic variant of S. typhimurium)?". Paper presented in 22nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2012.
  137. Antunes, Patricia; Campos, Joana; Novais, Carla; Machado, Elisabete; Mourão, Joana; Grosso, Filipa; Quinteira, Sandra; et al. "Aquacultures as reservoirs of pathogenic bacteria and clinically relevant antibiotic resistance genes". Paper presented in 22nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2012.
  138. Silveira, Eduarda; Freitas, Ana R.; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Spread of large conjugative plasmids carrying antibiotic, copper and mercury resistance genes among Enterococcus from different sources". Paper presented in 22nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2012.
  139. Novais, Carla; Antunes, Patricia; Silveira, Eduarda; Campos, Joana; Fonte, Joana; Grosso, Filipa; Machado, Elisabete; et al. "Influx of Enterococcus carrying antibiotic, copper and virulence resistance genes in antibiotic-free trout aquacultures by river water and feed". Paper presented in 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, 2012.
  140. Antunes, Patricia; Campos, Joana; Machado, Elisabete; Novais, Carla; Mourão, Joana; Grosso, Filipa; Freitas, Ana R.; Coque, Teresa M.; Peixe ,Luísa. "Plasmid-mediated quinolone resistance genes are widely spread in trout aquacultures". Paper presented in 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, 2012.
  141. Silveira, Eduarda; Freitas, Ana R.; Barros, Mariana; Pinto, Helena; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. ".Large conjugative enterococcal plasmids from different sources carry antibiotic resistance genes and a diversity of merA (mercury) genes spread among Gram-positive bacteria". Paper presented in 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, 2012.
  142. Antunes, Patricia; Mourão, Joana; Alves, Tatiana; Campos, Joana; Novais, Carla; Novais, Ângela; Peixe ,Luísa. "Characterization of the first extended-spectrum beta-lactamase-producing nontyphoidal Salmonella strain isolated in Portugal". Paper presented in 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, 2012.
  143. Gonçalves, Teresa; Silva, Ricardo; Novais, Ângela; Novais, Carla; Sousa, João C.; Peixe ,Luísa; Machado, Elisabete. "Untreated water for human consumption is a reservoir of clinically relevant antibiotic resistance genes and Escherichia coli clones". Paper presented in 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, 2012.
  144. Barros, Mariana; Pereira, Joana; Campos, Joana; Silveira, Eduarda; Peixe ,Luísa; Antunes, Patricia; Novais, Carla. "Trutas de aquacultura comercializadas em Portugal são reservatórios de Enterococcus spp com genes que codificam para resistência a antibióticos, biocidas e fatores de virulência". Paper presented in 5ª Reunião Anual PortFir, 2012.
  145. Pereira, Joana; Campos, Joana; Mourão, Joana; Barros, Mariana; Peixe ,Luísa; Novais, Carla; Antunes, Patricia. "Trutas arco-íris de aquacultura, veículos de bactérias e de genes de resistência a antibióticos clinicamente relevantes". Paper presented in 5ª Reunião Anual PortFir, 2012.
  146. Novais, Carla; Escada, Ricardo; Freitas, Ana R.; Silveira, Eduarda; Coque, Teresa M.; Peixe ,Luísa. "High incidence of horizontal transfer of ampicillin resistance (pbp5) among CC17 Enterococcus faecium". Paper presented in 21th ECCMID/27th ICC, 2011.
  147. Mourão, Joana; Dias, L; Ferreira, L; Alves, T; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Caracterização fenotípica da resistência aos antibióticos em Salmonella enterica serótipo 4,5,12:i- (variante monofásica de S. Typhimurium) em Portugal". Paper presented in XXI Congresso Científico - Alimentação, Ciência e Saúde., 2011.
  148. Silveira, Eduarda; Freitas, Ana R.; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Dissemination of two copper resistance genes (tcrB and CueO) in multidrug resistant Enterococci from different sources". Paper presented in FEMS 2011- 4th Congress of European Microbiologists, 2011.
  149. Antunes, Patricia; Mourão, Joana; Novais, Carla; Peixe ,Luísa. "Occurrence of pcoD, a gene conferring copper resistance in multidrug resistant Salmonella". Paper presented in FEms 2011-4TH Congress of European Microbiologists, 2011.
  150. Campos, Joana; Mourão, Joana; Pires, João; Silva, Ana Cristina; Costa, Carmen; Nunes, Heloísa; Pestana, Nazaré; et al. "Are ready-to-eat salads an important vehicle of pathogenic and comensal bacteria resistant to antibiotics?". Paper presented in 4º Encontro de Jovens Investigadores da Universidade do Porto (IJUP 2011), 2011.
  151. Silveira, Eduarda; Freitas, Ana R.; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Spread of large plasmids carrying antibiotic and copper resistance genes among enterococci from different ecological niches". Paper presented in Congresso Nacional da Sociedade Portuguesa de Microbiologia e Sociedade Portuguesa de Biotecnologia (MicroBiotec’11)., 2011.
  152. Silveira, Eduarda; Freitas, Ana R.; Antunes, Patricia; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Estará o uso de cobre a contribuir para a selecção de bactérias resistentes aos antibióticos na produção animal e em humanos?". Paper presented in ª Reunião Anual PortFIR - Gestão da Informação para a Nutrição e Segurança Alimentar, 2011.
  153. Mourão, Joana; Dias, Laura; Ferreira, Liliana; Alves, Tatiana; Machado, Jorge; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Salmonella enterica serótipo 4,[5],12:i:-, um problema emergente de segurança alimentar". Paper presented in 4ª Reunião Anual PortFIR - Gestão da Informação para a Nutrição e Segurança Alimentar, 2011.
  154. Mourão, Joana; Dias, Laura; Ferreira, Liliana; Alves, Tatiana; Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Molecular and Phenotypic Characterization of the emerging Salmonella enterica serotype 4,[5],12:i:-". Paper presented in Congresso Nacional da Sociedade Portuguesa de Microbiologia e Sociedade Portuguesa de Biotecnologia (MicroBiotec’11), 2011.
  155. Freitas, Ana R.; Novais, Carla; Cunha, Ana; Silveira. Eduarda; Peixe ,Luísa; Coque, Teresa M.. "Plasmid analysis of vancomycin-resistant enterococci isolates from Portuguese poultry and healthy humans". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases, 2010.
  156. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Diversity of hyl plasmids among international CC17 Enterococcus faecium strains, 1992-2009". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases, 2010.
  157. Silveira, Eduarda; Freitas, Ana R.; Peixe ,Luísa; Novais, Carla. "Co-dispersion of copper and antibiotic resistance genes among enterococci from different ecological niches, Portugal". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases, 2010.
  158. Novais, Carla; Freitas, Ana R.; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. "Diversity of CTn6000 among enterococci from different ecological niches". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases, 2010.
  159. Novais, Carla; Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Distribution of Gram Positive Conjugative Transposons among Vancomycin-Resistant Enterococcus faecalis and Enterococcus faecium Associated with International Hospital Outbreaks". Paper presented in 3rd ASM Conference on Enterococci, 2010.
  160. Freitas, Ana R.; Tedim-Pedrosa, Ana; Francia, Maria V.; Jensen, Lars; Novais, Carla; Ruiz-Garbajosa, Patricia; Willams, Rob L.; et al. "Plasmid diversity among Enterococcus faecium belonging to the polyclonal sub-cluster CC17: their impact in the spread of vancomycin resistance worldwide (1986-2009)". Paper presented in 3rd ASM Conference on Enterococci, 2010.
  161. Novais, Carla; Freitas, Ana R.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Enterococci from Human, Animal and Environmental Sources are Reservoir of Gram Positive Conjugative Transposons". Paper presented in 3rd ASM Conference on Enterococci, 2010.
  162. Novais, Carla; Freitas, Ana R.; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. "Spread of tetS among enterococci is associated with CTn6000 and plasmids". Paper presented in 3rd ASM Conference on Enterococci, 2010.
  163. Campos, Joana; Mourão, Joana; Pires, João; Silva, Ana Cristina; Costa, Carmen; Nunes, Heloísa; Peixe ,Luísa; et al. "Avaliação microbiológica de saladas prontas a comer e caracterização da resistência a antibióticos em Escherichia coli". Paper presented in REUNIÃO ANUAL PORTFIR www.gs1pt.org, 2010.
  164. Gomes, Francisca; Silva, Ricardo; Freitas, Ana R.; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "Co-selection of copper and antibiotic resistance genes in enterococci from piggeries, Portugal". Paper presented in FEMS Microbiology 2009, 2009.
  165. Freitas, Ana R.; Novais, Carla; Silva, Rosa M.; Coque, Teresa M.; Peixe ,Luísa. "International spread of of vancomycin-resistant Enterococcus faecium (CC17, CC5) and Enterococcus faecalis CC2 among animals and humans". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, 2009.
  166. Freitas, Ana R.; Novais, Carla; Francia, Maria V.; Peixe ,Luísa; Coque, Teresa M.. "Plasmid analysis of vancomycin-resistant Enterococcus faecium isolates from hospitals and aquatic environments in Portugal (1996-2008". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, 2009.
  167. Novais, Carla; Freitas, Ana R.; Barros, Carla; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Portuguese healthy human volunteers are reservoirs of conjugative transposons associated with tetracycline and/or erythromycin resistance". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, 2009.
  168. Novais, Carla; Freitas, Ana R.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Spread of EfcTn1 in enterococci from different ecological niches.". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, 2009.
  169. Novais, Carla; Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Characterization of Gram-positive conjugative transposons among international epidemic vancomycin-resistant isolates of Enterococcus faecalis and Enterococcus faecium.". Paper presented in 19th European Congress Clinical Microbiology and Infectious Diseases, 2009.
  170. Silva, Rosa M.; Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Population structure of Enterococcus isolates from Portuguese hospitals (1997-2007).". Paper presented in II Encontro de Jovens Investigadores da Universidade do Porto, 2009.
  171. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "DISTRIBUTION OF GRAM POSITIVE CONJUGATIVE TRANSPOSONS AMONG ENTEROCOCCI FROM HUMAN, ANIMAL AND ENVIRONMENTAL SOURCES". Paper presented in ESCMID Conference on Enterococci: from Animals to Man., 2009.
  172. Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Novais, Carla; Pires, João; Tedim-Pedrosa, Ana; Jensen, Lars; et al. "Population Structure of International Vancomycin Resistant Enterococcus faecium (VREfm) Strains Causing Outbreaks". Paper presented in ESCMID Conference on Enterococci: from Animals to Man., 2009.
  173. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. "Diversity of Hyl Plasmids among International CC17 Enterococcus faecium Strains (1992-2009)". Paper presented in ESCMID Conference on Enterococci: from Animals to Man, 2009.
  174. Freitas, Ana R.; Novais, Carla; Ruiz-Garbajosa, Patricia; Francia, Maria V.; Silva, Rosa M.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Genetic Dynamics of a Successful Enterococcus faecalis Clone Persistently Recovered from European Hospitals during the Last Decade (1993-2008).". Paper presented in 48th Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC), 2008.
  175. Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Ruiz-Garbajosa, Patricia; Novais, Carla; Baquero, Fernando; Coque, Teresa M.. "Plasmid analysis of international vancomycin resistant Enterococcus faecalis strains (1989-2004).". Paper presented in International Plasmid Biology Conference (IPBC)., 2008.
  176. Freitas, Ana R.; Novais, Carla; Ruiz-Garbajosa, Patricia; Coque, Teresa M.; Peixe ,Luísa. "Molecular characterization of Enterococcus isolates from Portugal". Paper presented in 8th International meeting on Microbial Epidemiological Markers, 2008.
  177. Novais, Carla; Freitas, Ana R.; Coque, Teresa M.; Nogueira, Ana; Silva, Ricardo; Dias, Ana; Sousa, João Carlos; Peixe ,Luísa. "Portuguese piggeries as reservoir of antibiotic multi-resistant enterococci.". Paper presented in ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens, 2008.
  178. Novais, Carla; Freitas, Ana R.; Moreira, Lara; Francia, Maria V.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Characterization of Gram Positive Conjugative Transposons in Enterococci from different sources by a Multiplex-PCR assay.". Paper presented in 18th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2008.
  179. Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Ruiz-Garbajosa, Patricia; Novais, Carla; Zervos M.; Baquero, Fernando; Coque, Teresa M.. "Plasmid characterization of vancomycin resistant Enterococcus faecalis strains from different continents (1989-2004).". Paper presented in 18th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2008.
  180. Freitas, Ana R.; Novais, Carla; Ruiz-Garbajosa, Patricia; Coque, Teresa M.; Peixe ,Luísa. "Population Structure of Enterococcus isolates from Portugal.". Paper presented in 18th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2008.
  181. Magalhães, Ricardo; Abreu, Cristina; Silva, Ricardo; Peixe ,Luísa; Machado, Elisabete; Novais, Carla; Sousa, João Carlos. "Contribution of drinking water for the dissemination of Gram positive and Gram negative bacteria harbouring antibiotic resistance genes in Portugal.". Paper presented in 18th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2008.
  182. Freitas, Ana R.; Francia, Maria V.; Novais, Carla; Jensen, Lars; Willams, Rob L.; Baquero, Fernando; Coque, Teresa M.. "Plasmid analysis of international vancomycin resistant Enterococcus faecium strains causing outbreaks in the last 20 years (1986-2007)". Paper presented in International Plasmid Biology Conference (IPBC). Gdansk, Polónia., 2008.
  183. Freitas, Ana R.; Francia, Maria V.; Peixe ,Luísa; Novais, Carla; Jensen, Lars; Willams, Rob L.; Baquero, Fernando; Coque, Teresa M.. "Plasmid characterization of vancomycin resistant Enterococcus faecium strains from different continents (1986-2007)". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2008.
  184. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "In Vitro Activity of Tigecycline against enterococci isolates from different sources of Portugal.". Paper presented in 47th IInternacional Congress of Antimicrobial Agents and Chemotherapy, 2007.
  185. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Persistence of vancomycin-resistance in portuguese poultry setting despite growth ban interventions: horizontal transfer plays a relevant role?". Paper presented in 4th Congress of the European Society for Emerging Infections., 2007.
  186. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Interhospital dissemination of glycopeptide resistance among enterococcal clinical isolates from Portugal is associated to spread of epidemic pMG1-like plasmids carrying diverse Tn1546 variants.". Paper presented in 17th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2007.
  187. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Vancomycin-resistant enterococci widely spread in Portuguese hospitals are associated with vanA plasmids carrying diverse Tn1546 variants". Paper presented in Micro 07- Biotec07, 2007.
  188. Silva, Ricardo; Magalhães, Ricardo; Abreu, Cristina; Sousa, João Carlos; Peixe ,Luísa; Novais, Carla; Machado, Elisabete. "Antibiotic resistance genes and integron structures among Gram negative bacilli recovered from water for human consumption". Paper presented in Micro 07- Biotec07, 2007.
  189. Abreu, Cristina; Magalhães, Ricardo; Cruz, Mariana; Sousa, João Carlos; Peixe ,Luísa; Machado, Elisabete; Novais, Carla. "Water for human consumption as source of antibiotic resistant and virulent Enterococcus spp". Paper presented in Micro 07- Biotec07, 2007.
  190. Novais, Carla; Freitas, Ana R.; Coque, Teresa M.; Sousa, João Carlos; Peixe ,Luísa. "Contribution of Portuguese piggeries to dissemination of multi- drug resistant enterococci in environment.". Paper presented in Micro 07- Biotec07, 2007.
  191. Freitas, Ana R.; Novais, Carla; Coque, Teresa M.; Peixe ,Luísa. "Large conjugative plasmids associated to te persistence of vancomycin resistant enterococci in Portuguese hospitals.". Paper presented in 2nd FEMS, 2006.
  192. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Peixe ,Luísa. "Spread of multiresistant Portuguese enterococci from human, animal and environmental sources". Paper presented in 2nd FEMS, 2006.
  193. Ruiz-Garbajosa, Patricia; Zervos M.; Donabedian, Susan; Novais, Carla; Del Campo, Rosa; Baquero, Fernando; Coque, Teresa M.. "Molecular Characterization of Vancomycin Resistant Enterococcus faecalis (VREF) Strains Causing Outbreaks in Different Countries". Paper presented in 46th Interscience Conference on Antimicrobial Agents and Chemotherapy (ICCAC), 2006.
  194. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; del Grosso, Maria; Peixe ,Luísa. "European intercountry dissemination of of a glycopeptide resistant E. faecalis clone.". Paper presented in 16th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2006.
  195. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Peixe ,Luísa. "Molecular characterization of Tn1546 from enterococci isolated from Portuguese human, animal and environmental sources.". Paper presented in 16th European Congress of Clinical Microbiology and Infections Diseases (ECCMID), 2006.
  196. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Wide dissemination of enterococci highly resistant to aminoglicosides among poultry and healthy humans from Portugal.". Paper presented in 15th European Congress of Clinical Microbiology and Infections Diseases., 2005.
  197. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Molecular characterization of vancomycin-resistant Enterococcus faecium from Portuguese hospitals". Paper presented in 15th European Congress of Clinical Microbiology and Infections Diseases., 2005.
  198. Novais, Carla; Coque, Teresa M.; Costa, Maria J.; Sousa, João Carlos; Baquero, Fernando; Peixe ,Luísa. "High Occurrence and Persistence of Antibiotic Resistant Enterococci in Poultry Food Samples in Portugal.". Paper presented in Micro 05- Biotec05, 2005.
  199. Novais, Carla; Coque, Teresa M.; Boerlin, Patrick; Herrero, Inma; Moreno, Miguel; Dominguez, L.; Peixe ,Luísa. "Dissemination of a vancomycin resistant Enterococcus faecium clone among swine from four European countries". Paper presented in Micro 05- Biotec05, 2005.
  200. Nascimento, São José; Pestana, Nazaré; Sousa, Isaura; Cabral, Miguel; Pinto, Eugénia; Peixe ,Luísa; Neto, Helena; et al. "Estudo da resistência bacteriana aos antibióticos e pesquisa da actividade antimicrobiana, imunomodeladora e anticancerígena de novos compostos químicos". Paper presented in Simpósio “Os farmacêuticos no sistema de saúde”, 2005.
  201. Novais, Carla; Ferreira, Helena; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Low diversity of vancomycin resistant enterococci (VRE) in hospital sewage and surface water samples.". Paper presented in 44th Intersicience Conference of Antimicrobial Agents and Chemotherapy., 2004.
  202. Novais, Carla; Coque, Teresa M.; Baquero, Fernando; Sousa, João Carlos; Peixe ,Luísa. "Local engineering and the evolution of an Enterococcus faecalis clone in three Portuguese cities during a 7-year period (1996-2002).". Paper presented in 14th European Congress of Clinical Microbiology and Infections Diseases., 2004.
  203. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Activity of daptomycin against clinical and environmental Enterococci from Portugal.". Paper presented in 14th European Congress of Clinical Microbiology and Infections Diseases., 2004.
  204. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Baquero, Fernando; Peixe ,Luísa. "High diversity of Tn1546 among vancomycin resistant enterococci from Portuguese human, animal and environmental sources". Paper presented in 14th European Congress of Clinical Microbiology and Infections Diseases.Praga,, 2004.
  205. Milhazes, N.; Rodrigues, C.; Novais, Carla; Quinteira, S.; Antunes, Patricia; Peixe ,Luísa; Borges, F.. "ß-Nitrostyrene and ß-methyl-ß-nitrostyrene derivatives as potential antibacterial agents: a structure-activity relationship study". Paper presented in International Symposium on Advances in Synthetic, Combinatorial and Medicinal Chemistry (ASCMC) ., 2004.
  206. Calheiros, R.; Milhazes, N.; Rodrigues, C.; Novais, Carla; Quinteira, S.; Antunes, Patricia; Peixe ,Luísa; Borges, F.; Marques; M.P.M.. "Structure-activity study of ß-nitrostyrene and ß-methyl- ß-nitrostyrene derivatives–synthesis, antibacterial activity and conformational analysis". Paper presented in XIX Encontro Nacional da Sociedade Portuguesa de Química, 2004.
  207. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Characterization of macrolide and streptogramin-resistant genes in enterococci from poultry and human samples from Portugal.". Paper presented in 13th European Congress of Clinical Microbiology and Infections Diseases., 2003.
  208. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Dissemination Of Aminoglicoside Resistance Genes In Enterococci Isolated From Poultry Products And Healthy Human Volunteers". Paper presented in Micro 2003-Congresso Nacional de Microbiologia, 2003.
  209. Pimentel, Lígia L.; Novais, Carla; Pintado, Manuela M. E.; Gomes, A. M. P.; Pintado, A. I. E.; Coque, Teresa M.; Sousa, João Carlos; Malcata, Xavier F.; Peixe ,Luísa. "Antimicrobial susceptibility of enterococci isolated from Terrincho cheese". Paper presented in “Micro 2003”-Congresso Nacional de Microbiologia., 2003.
  210. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Incidence of multi-resistant Enterococci in enteric flora of healthy human volunteers from Portugal". Paper presented in 4th European congress of chemotherapy and infection., 2002.
  211. Novais, Carla; Sousa, João Carlos; Amorim, José M.; Coque, Teresa M.; Peixe ,Luísa. "Vancomycin resistant Enterococci from humans and poultry in Portugal: dissemination of VanB phenotype-vanA genotype in the communty and hospital settings.". Paper presented in 42nd Interscience conference on antimicrobial agents and chemotherapy (ICAAC)., 2002.
  212. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Ferreira, Helena; Peixe ,Luísa. "The community and the environment: insights about recent epidemiology of Enterococcus resistance in Portugal". Paper presented in 42nd Interscience conference on antimicrobial agents and chemotherapy (ICAAC)., 2002.
  213. Novais, Carla; Réu, Cristina; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Isolation of enterococci resistant to vancomycin from faecal samples of swine and raw poultry products in Portugal.". Paper presented in 11th European Congress of Clinical Microbiology and Infectious Diseases., 2001.
  214. Novais, Carla; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Activity of linezolid against enterococci from raw poultry products and faecal samples of human healthy volunteers in Portugal.". Paper presented in Antibacterial and antifungal drug discovery and development., 2001.
  215. Novais, Carla; Vital, Clementina; Ribeiro, Graça; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa. "Enterococos Hospitalares Resistentes aos Glicopéptidos (Erg): Tipagem Molecular e Caracterização de Genes de Resistência". Paper presented in Micro 2001”-Congresso Nacional de Microbiologia., 2001.
  216. Novais, Carla; Réu, Cristina; Sousa, João Carlos; Peixe ,Luísa. "Resistência à vancomicina em Enterococcus spp de suínos". Paper presented in cV Congresso Nacional de Doenças Infecciosas/ I Congresso Luso-Galaico de Doenças Infecciosas/ I Encontro Académico de S. Paulo- Santiago de Compostela-Porto de Doenças Infecciosas., 2000.
  217. Novais, Carla; Réu, Cristina; Sousa, João Carlos; Peixe ,Luísa. "Reduced susceptibility to different antibiotics in vancomycin-resistant enterococci from swine.". Paper presented in Food safety., 2000.
  218. Novais, Carla; Réu, Cristina; Sousa, João Carlos; Peixe ,Luísa. "Enterococos entéricos resistentes à vancomicina em suínos". Paper presented in “Micro 99”-Congresso. Nacional de Microbiologia., 1999.
  219. Quinteira, S.; Sousa, João Carlos; Novais, Carla; Peixe ,Luísa. "Perfil beta-lactamásico e genómico (ERIC-PCR) de Rahnella aquatilis". Paper presented in Micro 99”-Congresso Nacional de Microbiologia, 1999.
Journal article
  1. Pereira, Ana P.; Antunes, Patrícia; Peixe, Luísa; Freitas, Ana R.; Novais, Carla. "Current insights into the effects of cationic biocides exposure on Enterococcus spp.". Frontiers in Microbiology 15 (2024): http://dx.doi.org/10.3389/fmicb.2024.1392018.
    10.3389/fmicb.2024.1392018
  2. Antunes, Patrícia; Novais, Carla; Peixe, Luísa; Freitas, Ana R. "Pet food safety: emerging bacterial hazards and implications for public health". Current Opinion in Food Science 57 (2024): 101165. http://dx.doi.org/10.1016/j.cofs.2024.101165.
    10.1016/j.cofs.2024.101165
  3. Ribeiro-Almeida, Marisa; Mourão, Joana; Magalhães, Mafalda; Freitas, Ana R; Novais, Carla; Peixe, Luísa; Antunes, Patrícia. "Raw meat-based diet for pets: a neglected source of human exposure to Salmonella and pathogenic Escherichia coli clones carrying mcr, Portugal, September 2019 to January 2020". Eurosurveillance 29 18 (2024): http://dx.doi.org/10.2807/1560-7917.es.2024.29.18.2300561.
    10.2807/1560-7917.es.2024.29.18.2300561
  4. Mourão, Joana; Magalhães, Mafalda; Ribeiro-Almeida, Marisa; Rebelo, Andreia; Novais, Carla; Peixe, Luísa; Novais, Ângela; Antunes, Patrícia. "Decoding Klebsiella pneumoniae in poultry chain: unveiling genetic landscape, antibiotic resistance, and biocide tolerance in non-clinical reservoirs". Frontiers in Microbiology 15 (2024): http://dx.doi.org/10.3389/fmicb.2024.1365011.
    10.3389/fmicb.2024.1365011
  5. Roer, Louise; Kaya, Hülya; Tedim, Ana P.; Novais, Carla; Coque, Teresa M.; Aarestrup, Frank M.; Peixe, Luísa; et al. "VirulenceFinder for Enterococcus faecium and Enterococcus lactis : an enhanced database for detection of putative virulence markers by using whole-genome sequencing data". Microbiology Spectrum 12 3 (2024): http://dx.doi.org/10.1128/spectrum.03724-23.
    10.1128/spectrum.03724-23
  6. Chaguza, Chrispin; Pöntinen, Anna K.; Top, Janetta; Arredondo-Alonso, Sergio; Freitas, Ana R.; Novais, Carla; Torres, Carmen; et al. "The population-level impact of Enterococcus faecalis genetics on intestinal colonization and extraintestinal infection". Microbiology Spectrum 11 6 (2023): http://dx.doi.org/10.1128/spectrum.00201-23.
    Open access • 10.1128/spectrum.00201-23
  7. Rebelo, Andreia; Duarte, Bárbara; Freitas, Ana R.; Almeida, Agostinho; Azevedo, Rui; Pinto, Edgar; Peixe, Luísa; Antunes, Patrícia; Novais, Carla. "Uncovering the effects of copper feed supplementation on the selection of copper-tolerant and antibiotic-resistant Enterococcus in poultry production for sustainable environmental practices". Science of The Total Environment 900 (2023): 165769. http://dx.doi.org/10.1016/j.scitotenv.2023.165769.
    Open access • 10.1016/j.scitotenv.2023.165769
  8. Pereira, Ana P.; Antunes, Patrícia; Bierge, Paula; Willems, Rob J. L.; Corander, Jukka; Coque, Teresa M.; Pich, Oscar Q.; et al. "Unraveling Enterococcus susceptibility to quaternary ammonium compounds: genes, phenotypes, and the impact of environmental conditions". Microbiology Spectrum 11 5 (2023): http://dx.doi.org/10.1128/spectrum.02324-23.
    Open access • 10.1128/spectrum.02324-23
  9. Rebelo, Andreia; Almeida, Agostinho; Peixe, Luísa; Antunes, Patrícia; Novais, Carla. "Unraveling the Role of Metals and Organic Acids in Bacterial Antimicrobial Resistance in the Food Chain". Antibiotics 12 9 (2023): 1474. http://dx.doi.org/10.3390/antibiotics12091474.
    Open access • 10.3390/antibiotics12091474
  10. Rebelo, Andreia; Duarte, Bárbara; Freitas, Ana R.; Peixe, Luísa; Antunes, Patrícia; Novais, Carla. "Exploring Peracetic Acid and Acidic pH Tolerance of Antibiotic-Resistant Non-Typhoidal Salmonella and Enterococcus faecium from Diverse Epidemiological and Genetic Backgrounds". Microorganisms 11 9 (2023): 2330. http://dx.doi.org/10.3390/microorganisms11092330.
    Open access • 10.3390/microorganisms11092330
  11. Mourão, Joana; Ribeiro-Almeida, Marisa; Novais, Carla; Magalhães, Mafalda; Rebelo, Andreia; Ribeiro, Sofia; Peixe, Luísa; Novais, Ângela; Antunes, Patrícia. "From Farm to Fork: Persistence of Clinically Relevant Multidrug-Resistant and Copper-Tolerant Klebsiella pneumoniae Long after Colistin Withdrawal in Poultry Production". Microbiology Spectrum 11 4 (2023): http://dx.doi.org/10.1128/spectrum.01386-23.
    Open access • 10.1128/spectrum.01386-23
  12. Novais, Carla; Almeida-Santos, Ana C.; Paula Pereira, Ana; Rebelo, Andreia; Freitas, Ana R.; Peixe, Luísa. "Alert for molecular data interpretation when using Enterococcus faecium reference strains reclassified as Enterococcus lactis". Gene 851 (2023): 146951. http://dx.doi.org/10.1016/j.gene.2022.146951.
    In press • 10.1016/j.gene.2022.146951
  13. Rebelo, Andreia; Duarte, Bárbara; Ferreira, Carolina; Mourão, Joana; Ribeiro, Sofia; Freitas, Ana R.; Coque, Teresa M.; et al. "Enterococcus spp. from chicken meat collected 20 years apart overcome multiple stresses occurring in the poultry production chain: Antibiotics, copper and acids". International Journal of Food Microbiology 384 (2023): 109981. http://dx.doi.org/10.1016/j.ijfoodmicro.2022.109981.
    Open access • 10.1016/j.ijfoodmicro.2022.109981
  14. Novais, Carla; Antunes, Patrícia. "Inverted classes as a successful tool to overcome teaching and learning challenges imposed by COVID-19 lockdown to food microbiology laboratory classes". Social Sciences & Humanities Open 7 1 (2023): 100488. http://dx.doi.org/10.1016/j.ssaho.2023.100488.
    10.1016/j.ssaho.2023.100488
  15. Belloso Daza, Mireya Viviana; Almeida-Santos, Ana C.; Novais, Carla; Read, Antónia; Alves, Valquíria; Cocconcelli, Pier Sandro; Freitas, Ana R.; Peixe, Luísa. "Distinction between Enterococcus faecium and Enterococcus lactis by a gluP PCR-Based Assay for Accurate Identification and Diagnostics". Microbiology Spectrum (2022): http://dx.doi.org/10.1128/spectrum.03268-22.
    10.1128/spectrum.03268-22
  16. Pereira, Ana P.; Antunes, Patrícia; Willems, Rob; Corander, Jukka; Coque, Teresa M.; Peixe, Luísa; Freitas, Ana R.; Novais, Carla. "Evolution of Chlorhexidine Susceptibility and of the EfrEF Operon among Enterococcus faecalis from Diverse Environments, Clones, and Time Spans". Microbiology Spectrum 10 4 (2022): http://dx.doi.org/10.1128/spectrum.01176-22.
    10.1128/spectrum.01176-22
  17. Cruz, Rebeca; Pereira, Vânia; Pinho, Teresa; Ferreira, Isabel M. P. L. V. O.; Novais, Carla; Casal, Susana. "Safety and Quality of Canned Sardines after Opening: A Shelf-Stability Study". Foods 11 7 (2022): 991. http://dx.doi.org/10.3390/foods11070991.
    Open access • Published • 10.3390/foods11070991
  18. Freitas, Ana R.; Tedim, Ana P.; Almeida-Santos, Ana C.; Duarte, Bárbara; Elghaieb, Houyem; Abbassi, Mohamed S.; Hassen, Abdennaceur; Novais, Carla; Peixe, Luísa. "High-Resolution Genotyping Unveils Identical Ampicillin-Resistant Enterococcus faecium Strains in Different Sources and Countries: A One Health Approach". Microorganisms 10 3 (2022): 632. http://dx.doi.org/10.3390/microorganisms10030632.
    Published • 10.3390/microorganisms10030632
  19. Almeida-Santos, Ana C.; Novais, Carla; Peixe, Luísa; Freitas, Ana R.. "Enterococcus spp. as a Producer and Target of Bacteriocins: A Double-Edged Sword in the Antimicrobial Resistance Crisis Context". Antibiotics 10 10 (2021): 1215. http://dx.doi.org/10.3390/antibiotics10101215.
    Published • 10.3390/antibiotics10101215
  20. Rebelo, Andreia; Mourão, Joana; Freitas, Ana R.; Duarte, Bárbara; Silveira, Eduarda; Sanchez-Valenzuela, Antonio; Almeida, Agostinho; et al. "Diversity of metal and antibiotic resistance genes in Enterococcus spp. from the last century reflects multiple pollution and genetic exchange among phyla from overlapping ecosystems". Science of The Total Environment 787 (2021): 147548. http://dx.doi.org/10.1016/j.scitotenv.2021.147548.
    10.1016/j.scitotenv.2021.147548
  21. Tedim, Ana P; Lanza, Val F; Rodríguez, Concepción M; Freitas, Ana R; Novais, Carla; Peixe, Luísa; Baquero, Fernando; Coque, Teresa M. "Fitness cost of vancomycin-resistant Enterococcus faecium plasmids associated with hospital infection outbreaks". Journal of Antimicrobial Chemotherapy 76 11 (2021): 2757-2764. http://dx.doi.org/10.1093/jac/dkab249.
    10.1093/jac/dkab249
  22. Freitas, Ana R.; Finisterra, Liliana; Tedim, Ana P.; Duarte, Bárbara; Novais, Carla; Peixe, Luísa. "Linezolid- and Multidrug-Resistant Enterococci in Raw Commercial Dog Food, Europe, 2019–2020". Emerging Infectious Diseases 27 8 (2021): 2221-2224. http://dx.doi.org/10.3201/eid2708.204933.
    Open access • Published • 10.3201/eid2708.204933
  23. Finisterra, Liliana; Duarte, Bárbara; Peixe, Luísa; Novais, Carla; Freitas, Ana R.. "Industrial dog food is a vehicle of multidrug-resistant enterococci carrying virulence genes often linked to human infections". International Journal of Food Microbiology (2021): 109284. http://dx.doi.org/10.1016/j.ijfoodmicro.2021.109284.
    10.1016/j.ijfoodmicro.2021.109284
  24. Janetta Top; Sergio Arredondo-Alonso; Gerry Tonkin-Hill; Ana R. Freitas; Novais, Carla; Rebecca A. Gladstone; Maiju Pesonen; et al. "Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era". Nature Communications 12 1523 (2021):
    Open access • Published
  25. Antunes, Patrícia; Novais, Carla; Novais, Ângela; Grosso, Filipa; Ribeiro, Teresa G; Mourão, Joana; Perovic, Svetlana; et al. "MicroMundo@UPorto: an experimental microbiology project fostering student's antimicrobial resistance awareness and personal and social development". FEMS Microbiology Letters (2021): http://dx.doi.org/10.1093/femsle/fnab016.
    Published • 10.1093/femsle/fnab016
  26. Freitas, Ana R.; Pereira, Ana P.; Novais, Carla; Peixe, Luísa. "Multidrug-resistant high-risk Enterococcus faecium clones: can we really define them?". International Journal of Antimicrobial Agents 57 1 (2021): 106227. http://dx.doi.org/10.1016/j.ijantimicag.2020.106227.
    Published • 10.1016/j.ijantimicag.2020.106227
  27. Mourão, Joana; Rebelo, Andreia; Ribeiro, Sofia; Peixe, Luísa; Novais, Carla; Antunes, Patrícia. "Atypical Non-H2S-Producing Monophasic Salmonella Typhimurium ST3478 Strains from Chicken Meat at Processing Stage Are Adapted to Diverse Stresses". Pathogens 9 9 (2020): 701. http://dx.doi.org/10.3390/pathogens9090701.
    Published • 10.3390/pathogens9090701
  28. Freitas, Ana R; Tedim, Ana P; Duarte, Bárbara; Elghaieb, Houyem; Abbassi, Mohamed S; Hassen, Abdennaceur; Read, Antónia; et al. "Linezolid-resistant (Tn6246::fexB-poxtA) Enterococcus faecium strains colonizing humans and bovines on different continents: similarity without epidemiological link". Journal of Antimicrobial Chemotherapy 75 9 (2020): 2416-2423. http://dx.doi.org/10.1093/jac/dkaa227.
    Published • 10.1093/jac/dkaa227
  29. Novais, Carla; Freitas, Ana R.. "Transmission of Antibiotic Resistant Bacteria and Genes: Unveiling the Jigsaw Pieces of a One Health Problem". Pathogens 9 6 (2020): 497. http://dx.doi.org/10.3390/pathogens9060497.
    Published • 10.3390/pathogens9060497
  30. Mourão, Joana; Rebelo, Andreia; Ribeiro, Sofia; Peixe, Luísa; Novais, Carla; Antunes, Patrícia. "Tolerance to arsenic contaminant among multidrug-resistant and copper-tolerant Salmonella successful clones is associated with diverse ars operons and genetic contexts". Environmental Microbiology (2020): http://dx.doi.org/10.1111/1462-2920.15016.
    Published • 10.1111/1462-2920.15016
  31. Freitas, Ana R.; Tedim, Ana P.; Novais, Carla; Lanza, Val F.; Peixe, Luísa. "Comparative genomics of global optrA-carrying Enterococcus faecalis uncovers a common chromosomal hotspot for optrA acquisition within a diversity of core and accessory genomes". Microbial Genomics (2020): http://dx.doi.org/10.1099/mgen.0.000350.
    Published • 10.1099/mgen.0.000350
  32. de Oliveira, Emília S.; Freitas, Ana R.; Peixe, Luísa; Novais, Carla; Melo, M. Celeste. "Silent clonal spread of vancomycin-resistant Enterococcus faecalis ST6 and ST525 colonizing patients at hospital admission in Natal, Brazil". Infection Control & Hospital Epidemiology 41 4 (2020): 485-487. http://dx.doi.org/10.1017/ice.2020.24.
    Published • 10.1017/ice.2020.24
  33. Antunes, Patrícia; Novais, Carla; Peixe, Luísa. "Food-to-Humans Bacterial Transmission". Microbiology Spectrum 8 1 (2020): http://dx.doi.org/10.1128/microbiolspec.mtbp-0019-2016.
    Published • 10.1128/microbiolspec.mtbp-0019-2016
  34. Elghaieb, Houyem; Tedim, Ana P; Abbassi, Mohamed S; Novais, Carla; Duarte, Bárbara; Hassen, Abdennaceur; Peixe, Luísa; Freitas, Ana R. "From farm to fork: identical clones and Tn6674-like elements in linezolid-resistant Enterococcus faecalis from food-producing animals and retail meat". Journal of Antimicrobial Chemotherapy 75 1 (2020): 30-35. http://dx.doi.org/10.1093/jac/dkz419.
    Published • 10.1093/jac/dkz419
  35. Freitas, Ana R; Novais, Carla; Coque, Teresa M; Peixe, Luísa. "Comment on: Emergence of plasmid-mediated oxazolidinone resistance gene poxtA from CC17 Enterococcus faecium of pig origin". Journal of Antimicrobial Chemotherapy (2019): http://dx.doi.org/10.1093/jac/dkz432.
    Published • 10.1093/jac/dkz432
  36. Duarte, Bárbara; Pereira, Ana P.; Freitas, Ana R.; Coque, Teresa M.; Hammerum, Anette M.; Hasman, Henrik; Antunes, Patrícia; Peixe, Luísa; Novais, Carla. "2CS-CHXT Operon Signature of Chlorhexidine Tolerance among Enterococcus faecium Isolates". Applied and Environmental Microbiology 85 23 (2019): http://dx.doi.org/10.1128/aem.01589-19.
    Published • 10.1128/aem.01589-19
  37. León-Sampedro, Ricardo; del Campo, Rosa; Rodriguez-Baños, Mercedes; Lanza, Val F.; Pozuelo, María José; Francés-Cuesta, Carlos; Tedim, Ana P.; et al. "Phylogenomics of Enterococcus faecalis from wild birds: new insights into host-associated differences in core and accessory genomes of the species". Environmental Microbiology 21 8 (2019): 3046-3062. http://dx.doi.org/10.1111/1462-2920.14702.
    Published • 10.1111/1462-2920.14702
  38. Elghaieb, Houyem; Freitas, Ana R; Abbassi, Mohamed Salah; Novais, Carla; Zouari, Mohamed; Hassen, Abdennaceur; Peixe, Luísa. "Dispersal of linezolid-resistant enterococci carrying poxtA or optrA in retail meat and food-producing animals from Tunisia". Journal of Antimicrobial Chemotherapy 74 10 (2019): 2865-2869. http://dx.doi.org/10.1093/jac/dkz263.
    Published • 10.1093/jac/dkz263
  39. Novais, Carla; Campos, Joana; Freitas, Ana R.; Barros, Mariana; Silveira, Eduarda; Coque, Teresa M.; Antunes, Patrícia; Peixe, Luísa. "Water supply and feed as sources of antimicrobial-resistant Enterococcus spp. in aquacultures of rainbow trout (Oncorhyncus mykiss), Portugal". Science of The Total Environment 625 (2018): 1102-1112. http://dx.doi.org/10.1016/j.scitotenv.2017.12.265.
    Published • 10.1016/j.scitotenv.2017.12.265
  40. Freitas, Ana R.; Dilek, Aziz R.; Peixe, Luísa; Novais, Carla. "Dissemination of Staphylococcus epidermidis ST22 With Stable, High-Level Resistance to Linezolid and Tedizolid in the Greek-Turkish Region (2008–2016)". Infection Control & Hospital Epidemiology 39 4 (2018): 492-494. http://dx.doi.org/10.1017/ice.2018.5.
    Published • 10.1017/ice.2018.5
  41. Freitas, Ana R.; Novais, Carla; Duarte, Bárbara; Pereira, Ana P.; Coque, Teresa M.; Peixe, Luísa. "High rates of colonization by ampicillin-resistant enterococci in residents at long-term care facilities in Porto, Portugal". International Journal of Antimicrobial Agents 51 (2018): 503-507.
    Published • 10.1016/j.ijantimicag.2017.11.007
  42. Freitas, Ana R.; Tedim, Ana P.; Novais, Carla; Coque, Teresa M.; Peixe, Luísa. "Distribution of putative virulence markers in Enterococcus faecium: towards a safety profile review". Journal of Antimicrobial Chemotherapy 73 2 (2018): 306-319.
    Published • 10.1093/jac/dkx387
  43. Oravcová, Veronika; Peixe, Luísa; Coque, Teresa M.; Novais, Carla; Francia, Maria V.; Literák, Ivan; Freitas, Ana R.. "Wild corvid birds colonized with vancomycin-resistant Enterococcus faecium of human origin harbor epidemic vanA plasmids". Environment International 118 125-133 (2018): 125-133.
    Published • 10.1016/j.envint.2018.05.039
  44. Antunes, Patrícia; Campos, Joana; Mourão, Joana; Pereira, Joana; Novais, Carla; Peixe, Luísa. "Inflow water is a major source of trout farming contamination with Salmonella and multidrug resistant bacteria". Science of The Total Environment 642 642 (2018): 1163-1171.
    Published • 10.1016/j.scitotenv.2018.06.143
  45. Bender, Jennifer K.; Cattoir, Vincent; Hegstad, Kristin; Sadowy, Ewa; Coque, Teresa M.; Westh, Henrik; Hammerum, Anette M.; et al. "Update on prevalence and mechanisms of resistance to linezolid, tigecycline and daptomycin in enterococci in Europe: Towards a common nomenclature". Drug Resistance Updates 40 (2018): 25-39.
    Published • 10.1016/j.drup.2018.10.002
  46. Freitas, Ana R.; Sousa, Clara; Novais, Carla; Silva, Liliana; Ramos, Helena; Coque, Teresa M.; Lopes, João; Peixe, Luísa. "Rapid detection of high-risk Enterococcus faecium clones by matrix-assisted laser desorption ionization time-of-flight mass spectrometry". Diagnostic Microbiology and Infectious Disease 87 (2017): 299-307.
    Published • 10.1016/j.diagmicrobio.2016.12.007
  47. Antunes, P.; Campos, J.; Mourão, J.; RIBEIRO, T. G.; Novais, C.; Peixe, L.. "High occurrence and unusual serotype diversity of non-typhoidal Salmonella in non-clinical niches, Angola". Epidemiology and Infection 145 (2017): 883-886.
    Published • 10.1017/S095026881600296X
  48. Freitas, Ana R.; Elghaieb, Houyem; León-Sampedro, Ricardo; Abbassi, Mohamed Salah; Novais, Carla; Coque, Teresa M.; Hassen, Abdennaceur; Peixe, Luisa. "Detection of optrA in the African continent (Tunisia) within a mosaic Enterococcus faecalis plasmid from urban wastewaters". Journal of Antimicrobial Chemotherapy 000 (2017): 000-000.
    Published • 10.1093/jac/dkx321
  49. Mourão, Joana; Rae, Jennifer; Silveira, Eduarda; Freitas, Ana R.; Coque, Teresa M.; Peixe ,Luísa; Antunes, Patricia; Novais, Carla. "Relevance of tcrYAZB operon acquisition for Enterococcus survival to high copper concentrations under anaerobic conditions". Journal of Antimicrobial Chemotherapy 71 (2016): 560-563.
    Published • 10.1093/jac/dkv330
  50. Campos, Joana; Mourão, Joana; Marçal, Sara; Machado, Jorge; Novais, Carla; Peixe, Luísa; Antunes, Patrícia. "Clinical Salmonella Typhimurium ST34 with metal tolerance genes and an IncHI2 plasmid carrying oqxAB-aac(6')-Ib-cr from Europe". Journal of Antimicrobial Chemotherapy 71 3 (2016): 843-845. http://dx.doi.org/10.1093/jac/dkv409.
    Published • 10.1093/jac/dkv409
  51. León-Sampedro, Ricardo; Novais, Carla; Peixe, Luísa; Baquero, Fernando; Coque, Teresa M.. "Diversity and Evolution of the Tn5801-tet(M)-Like Integrative and Conjugative Elements among Enterococcus, Streptococcus, and Staphylococcus". Antimicrobial Agents and Chemotherapy 60 3 (2016): 1736-1746.
    Published • 10.1128/AAC.01864-15
  52. Mourão, Joana; Marçal, Sara; Ramos, Paula; Campos, Joana; Machado, Jorge; Peixe, Luísa; Novais, Carla; Antunes, Patrícia. "Tolerance to multiple metal stressors in emerging non-typhoidal MDR Salmonella serotypes: a relevant role for copper in anaerobic conditions". Journal of Antimicrobial Chemotherapy 71 (2016): 2147-2157.
    Published • 10.1093/jac/dkw120
  53. Freitas, Ana R.; Novais, Carla; Read, Antónia; Alves, Valquíria; Peixe, Luísa. "Co-infection with three linezolid-resistant Enterococcus faecium ST117 strain variants: what are we missing in diagnosis?". International Journal of Antimicrobial Agents 47 (2016): 500-501.
    Published • 10.1016/j.ijantimicag.2016.03.011
  54. Freitas, Ana R.; Tedim, Ana P.; Francia, Maria V.; Jensen, Lars B.; Novais, Carla; Peixe, Luísa; Sánchez-Valenzuela, Antonio; et al. "Multilevel population genetic analysis of vanA and vanB Enterococcus faecium causing nosocomial outbreaks in 27 countries (1986–2012)". Journal of Antimicrobial Chemotherapy 71 (2016): 3351-3366.
    Published • 10.1093/jac/dkw312
  55. Novais, Carla; Tedim, Ana P.; Lanza, Val F.; Freitas, Ana R.; Silveira, Eduarda; Escada, Ricardo; Roberts, Adam P.; et al. "Co-diversification of Enterococcus faecium Core Genomes and PBP5: Evidences of pbp5 Horizontal Transfer". Frontiers in Microbiology 7 1581 (2016):
    Open access • Published • 10.3389/fmicb.2016.01581
  56. Silveira, Eduarda; Marques, Patrice; Freitas, Ana R.; Mourão, Joana; Coque, Teresa M.; Antunes, Patricia; Peixe ,Luísa; Novais, Carla. "A hospital sewage ST17 Enterococcus faecium with a transferable Inc18-like plasmid carrying genes coding for resistance to antibiotics and quaternary ammonium compounds (qacZ)". Journal Of Global Antimicrobial Resistance 3 1 (2015): 49-51. http://www.jgaronline.com/article/S2213-7165(14)00125-8/pdf.
    Published • 10.1016/j.jgar.2014.11.005
  57. Mourão, Joana; Novais, Carla; Machado, Jorge; Peixe, Luísa; Antunes, Patrícia. "Metal tolerance in emerging clinically relevant multidrug-resistant Salmonella enterica serotype 4,[5],12:i:- clones circulating in Europe". International Journal of Antimicrobial Agents 45 (2015): 610-616.
    Published • 10.1016/j.ijantimicag.2015.01.013
  58. Martins, Elsa; Novais, Carla; Freitas, Ana R.; Dias, Ana Rita; Ribeiro, Teresa G.; Antunes, Patrícia; Peixe, Luísa. "Filling the map for antimicrobial resistance in sub-Saharan Africa: ampicillin-resistant Enterococcus from non-clinical sources in Angola". Journal of Antimicrobial Chemotherapy 70 10 (2015): 2914-2916.
    Published • 10.1093/jac/dkv172
  59. Barros, Mariana; Branquinho, Raquel; Grosso, Filipa; Peixe, Luísa; Novais, Carla. "Linezolid-Resistant Staphylococcus epidermidis, Portugal, 2012". Emerging Infectious Diseases 20 5 (2014): 903-905. http://dx.doi.org/10.3201/eid2005.130783.
    Published • 10.3201/eid2005.130783
  60. Silveira, E.; Freitas, A. R.; Antunes, P.; Barros, M.; Campos, J.; Coque, T. M; Peixe, L.; Novais, C.. "Co-transfer of resistance to high concentrations of copper and first-line antibiotics among Enterococcus from different origins (humans, animals, the environment and foods) and clonal lineages". Journal of Antimicrobial Chemotherapy 69 (2014): 899-906.
    Published • 10.1093/jac/dkt479
  61. Mourão, J.; Machado, J.; Novais, C.; Antunes, P.; Peixe, L.. "Characterization of the emerging clinically-relevant multidrug-resistant Salmonella enterica serotype 4,[5],12:i:- (monophasic variant of S. Typhimurium) clones". European Journal of Clinical Microbiology & Infectious Diseases 33 12 (2014): 2249-2257.
    Published • 10.1007/s10096-014-2180-1
  62. Antunes, Patrícia; Mourão, Joana; Alves, Tatiana; Campos, Joana; Novais, Carla; Novais, Ângela; Peixe, Luísa. "Salmonella enterica serotype Bovismorbificans, a new host for CTX-M-9". International Journal of Antimicrobial Agents 41 (2013): 91-93.
    Published • 10.1016/j.ijantimicag.2012.09.009
  63. Freitas, Ana R.; Novais, Carla; Tedim-Pedrosa, Ana; Francia, Maria V.; Baquero, Fernando; Peixe ,Luísa; Coque, Teresa M.. "Microevolutionary Events Involving Narrow Host Plasmids Influences Local Fixation of Vancomycin-Resistance in Enterococcus Populations". Plos One 8 3 (2013): e60589-e60589. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0060589.
    Published • 10.1371/journal.pone.0060589
  64. Novais, C.; Freitas, A. R.; Silveira, E.; Antunes, P.; Silva, R.; Coque, T. M; Peixe, L.. "Spread of multidrug-resistant Enterococcus to animals and humans: an underestimated role for the pig farm environment". Journal of Antimicrobial Chemotherapy 68 (2013): 2746-2754.
    Published • 10.1093/jac/dkt289
  65. Campos, Joana; Mourão, Joana; Pestana, Nazaré; Peixe, Luísa; Novais, Carla; Antunes, Patrícia. "Microbiological quality of ready-to-eat salads: An underestimated vehicle of bacteria and clinically relevant antibiotic resistance genes". International Journal of Food Microbiology 166 3 (2013): 464-470.
    Published • 10.1016/j.ijfoodmicro.2013.08.005
  66. Novais, C.; Freitas, A. R.; Silveira, E.; Baquero, F.; Peixe, L.; Roberts, A. P.; Coque, T. M.. "Different Genetic Supports for the tet(S) Gene in Enterococci". Antimicrobial Agents and Chemotherapy 56 11 (2012): 6014-6018.
    Published • 10.1128/AAC.00758-12
  67. Novais, C.; Freitas, A. R.; Silveira, E.; Baquero, F.; Peixe, L.; Roberts, A. P.; Coque, T. M.. "A tet(S/M) hybrid from CTn6000 and CTn916 recombination". Microbiol-SGM 158 Pt_11 (2012): 2710-2711.
    Published • 10.1099/mic.0.062729-0
  68. Macedo, Ana S.; Freitas, Ana R.; Abreu, Cristina; Machado, Elisabete; Peixe, Luísa; Sousa, João C.; Novais, Carla. "Characterization of antibiotic resistant enterococci isolated from untreated waters for human consumption in Portugal". International Journal of Food Microbiology 145 1 (2011): 315-319.
    Published • 10.1016/j.ijfoodmicro.2010.11.024
  69. Freitas, A. R.; Coque, T. M.; Novais, C.; Hammerum, A. M.; Lester, C. H.; Zervos, M. J.; Donabedian, S.; et al. "Human and Swine Hosts Share Vancomycin-Resistant Enterococcus faecium CC17 and CC5 and Enterococcus faecalis CC2 Clonal Clusters Harboring Tn1546 on Indistinguishable Plasmids". Journal of Clinical Microbiology 49 3 (2011): 925-931.
    Published • 10.1128/JCM.01750-10
  70. Freitas, Ana R.; Novais, Carla; Correia, Rosa; Monteiro, Márcia; Coque, Teresa M.; Peixe, Luísa. "Non-susceptibility to tigecycline in enterococci from hospitalised patients, food products and community sources". International Journal of Antimicrobial Agents 38 2 (2011): 174-176.
    Published • 10.1016/j.ijantimicag.2011.04.014
  71. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Werner, Guido; Laverde-Gomez Jenny A; Cantón, Rafael; et al. "Global spread of the colonization-virulence hylEfm gene in megaplasmids of CC17 Enterococcus faecium polyclonal sub-cluster.". Antimicrobial Agents and Chemotherapy 64 (2010): 2660-2665. http://aac.asm.org/cgi/content/full/54/6/2660.
    Published • 10.1128/AAC.00134-10
  72. Silveira, Eduarda; Gomes, Francisca; Freitas, Ana R.; Silva, Ricardo; Sousa, João Carlos; Coque, Teresa M.; Peixe ,Luísa; Novais, Carla. "High prevalence of tcrB, a copper resistance gene, in antibiotic-resistant Enterococci from swines and piggeries environment". Revista da Faculdade de Ciências da Saúde-UFP 7 (2010): 000000-000000.
    Published
  73. Freitas, A. R.; Novais, C.; Ruiz-Garbajosa, P.; Coque, T. M.; Peixe, L.. "Clonal expansion within clonal complex 2 and spread of vancomycin-resistant plasmids among different genetic lineages of Enterococcus faecalis from Portugal". Journal of Antimicrobial Chemotherapy 63 6 (2009): 1104-1111.
    Published • 10.1093/jac/dkp103
  74. Freitas, A. R.; Novais, C.; Ruiz-Garbajosa, P.; Coque, T. M.; Peixe, L.. "Dispersion of Multidrug-Resistant Enterococcus faecium Isolates Belonging to Major Clonal Complexes in Different Portuguese Settings". Applied and Environmental Microbiology 75 14 (2009): 4904-4908.
    Published • 10.1128/AEM.02945-08
  75. Silveira, Eduarda; Freitas, Ana R.; Peixe ,Luísa; Novais, Carla. "Environmental spread of antibiotic molecules, antibiotic resistant bacteria and genes: jigsaw pieces of a public health problem". Revista da Faculdade de Ciências da Saúde 6 (2009): 244-253. http://hdl.handle.net/10284/1260.
    Published
  76. Novais, C.; Freitas, A. R.; Sousa, J. C.; Baquero, F.; Coque, T. M.; Peixe, L. V.. "Diversity of Tn1546 and Its Role in the Dissemination of Vancomycin-Resistant Enterococci in Portugal". Antimicrobial Agents and Chemotherapy 52 3 (2008): 1001-1008.
    Published • 10.1128/AAC.00999-07
  77. Werner G; Coque, T. M; Hammerum AM; Hope R; Hryniewicz W; Johnson A; Klare I; et al. "Emergence and spread of vancomycin resistance among enterococci in Europe.". Eurosurveillance 13 (2008): 19046-19046. http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=19046.
    Published
  78. Nogueira, Ana; Dias, Ana; Silva, Ricardo; Freitas, Ana R.; Sousa, JC; Peixe ,Luísa; Novais, Carla. "Contribuição das suiniculturas na selecção e disseminação de Enterococcus spp resistentes às tetraciclinas". Revista da Faculdade de Ciências da Saúde, Universidade Fernando Pessoa. 5 (2008): 164-173. http://hdl.handle.net/10284/968.
    Published
  79. C.Novais; T.Coque; Sousa, JC; L.Peixe. "Antimictrobial resistance among faecal enterococci from healthy individuals in Portugal". Clinical Microbiology and Infection 12 (2006): 1131-1134. http://www3.interscience.wiley.com/cgi-bin/fulltext/118633002/HTMLSTART.
    Published • 10.1111/j.1469-0691.2006.01542.x
  80. Milhazes, Nuno; Calheiros, Rita; Marques, M. Paula M.; Garrido, Jorge; Cordeiro, M. Natália D.S.; Rodrigues, Cátia; Quinteira, Sandra; et al. "ß-Nitrostyrene derivatives as potential antibacterial agents: A structure–property–activity relationship study". Bioorganic & Medicinal Chemistry 14 12 (2006): 4078-4088.
    Published • 10.1016/j.bmc.2006.02.006
  81. C.Novais; T.Coque; Sousa, JC; F.Baquero; L.Peixe. "High occurrence and persistence of antibiotic-resistant enterococci in poultry food samples in Portugal". Journal of Antimicrobial Chemotherapy 56 (2005): 1139-1143. http://jac.oxfordjournals.org/cgi/content/full/56/6/1139?view=long&pmid=16221760.
    Published • 10.1093/jac/dki360
  82. C.Novais; Sousa, JC; T.Coque; L.Peixe. "Molecular characterization of glycopeptide-resitant E.faecium isolates from Portuguese Hospitals.". Antimicrobial Agents and Chemotherapy 7 (2005): 3073-3079. http://aac.asm.org/cgi/content/full/49/7/3073?view=long&pmid=15980404.
    Published • 10.1128/AAC.49.7.3073-3079.2005
  83. C.Novais; T.Coque; H.Ferreira; Sousa, JC; L.Peixe. "Environmental contamination with vancomycin-resistant enterococci from hospital sewage in Portugal". Applied and Environmental Microbiology 6 (2005): 3364-3368. http://aem.asm.org/cgi/content/full/71/6/3364?view=long&pmid=15933043.
    Published • 10.1128/AEM.71.6.3364-3368.2005
  84. Novais C.; Coque, T. M; Boerlin, P.; Herrero, I.; Moreno, M.A.; Dominguez, L.; Peixe LV. "Vancomycin-resistant Enterococcus faecium clone in swine, Europe.". Emerging Infectious Diseases 11 (2005): 1985-1987. http://www.cdc.gov/ncidod/EId/vol11no12/05-0822.htm.
    Published
  85. C.Novais; T.Coque; Sousa, JC; F.Baquero; L.Peixe. "Local genetic patterns within a vancomyci-resistant E.faecalis clone in three hospitals in Portugal". Antimicrobial Agents and Chemotherapy 48 (2004): 3613-3617. http://aac.asm.org/cgi/content/full/48/9/3613?view=long&pmid=15328141.
    Published • 10.1128/AAC.48.9.3613-3617.2004
  86. C.Novais; Sousa, JC; T.Coque; L.Peixe. "In vitro activity of daptomycin against enterococci from nosocomial and community environments in Portugal". Journal of Antimicrobial Chemotherapy 1 (2004): 964-966. http://jac.oxfordjournals.org/cgi/content/full/54/5/964?view=long&pmid=15375109.
    Published • 10.1093/jac/dkh432
  87. C.Novais; Sousa, JC; T.Coque; L.Peixe. "First report of the activity of linezolide against portuguese enteropcocci from human,animal and environmental sources". Journal of Antimicrobial Chemotherapy 51 (2003): 1314-1315. http://jac.oxfordjournals.org/cgi/content/full/51/5/1314?view=long&pmid=12697650.
    Published
  88. Novais, Carla; Vital, Clementina; Ribeiro, Graça; Coque, Teresa M.; Peixe ,Luísa. "First characterization of vancomycin-resistant enterococci from a Portuguese hospital.". Journal of Antimicrobial Chemotherapy 49 (2002): 215-217.
    Published
Journal issue
  1. Novais, Carla; Antunes, Patrícia; Ana R. Freitas. "Environmental Hotspots and Drivers of Antimicrobial Resistance". Antibiotics (2023): https://www.mdpi.com/journal/antibiotics/special_issues/Environment_antibiotic.
  2. Novais, Carla; Ana R.Freitas. "Special Issue Guest Editor of Transmission of Antibiotic Resistant Bacteria and Genes: Unveiling the Jigsaw Pieces of a One Health Problem". Pathogens (2019): https://www.mdpi.com/journal/pathogens/special_issues/Transmission_Antibiotic_Resistant_Bacteria_Genes.
    Coeditor
Magazine article
  1. Novais, Carla; Antunes, Patricia. "Aquacultura e antimicrobianos", Riscos e Alimentos, 2012
  2. Novais, Carla. "Resistência aos antibióticos em Bactérias de Gram positivo", Mundo Farmacêutico, 2011
Manual
  1. Novais, Carla. MANUAL DA ASSOCIAÇÃO PORTUGUESA DE FARMACÊUTICOS HOSPITALARES SOBRE ANTIMICROBIANOS, capítulo "Antibióticos para bactérias de Gram positivo".. 2022.
    Published
  2. Antunes, Patricia; Novais, Carla; Freitas, Ana R.; Novais, Ângela; Grosso, Filipa; RIbeiro-Gonçalves, Teresa; Mourão, Joana; et al. Guia básico de MicroMundo@UPorto: EM BUSCA DE MICRORGANISMOS PRODUTORES DE NOVOS ANTIBIÓTICOS EM HABITATS NATURAIS. 2018.
Newsletter article
  1. Ana R.Freitas; Novais, Carla; Luisa Peixe. "Dog food sold across Europe contains antibiotic-resistant bacteria, including 'superbugs' found in hospital patients", EurekAlert, 2021, https://www.eurekalert.org/pub_releases/2021-07/esoc-dfs070821.php.
  2. Liliana Finisterra; Novais, Carla; Barbara Duarte; Luisa Peixe; Ana R. Freitas. "Press release: Study reveals raw-type dog foods as a major source of multidrug-resistant bacteria that could potentially colonize humans", EurekAlert, 2020, https://www.eurekalert.org/pub_releases/2020-04/esoc-srr041720.php.
  3. Liliana Finisterra; Novais, Carla; Barbara Duarte; Luisa Peixe; Ana R. Freitas. "Study finds raw-type dog foods as a major source of multidrug-resistant bacteria that could potentially colonize humans", Center for Infectious Disease Research and Policy (CIDRAP), 2020, https://www.cidrap.umn.edu/news-perspective/2020/04/eccmid-studies-probe-resistant-pathogens-pets-pet-food-and-people.
  4. Liliana Finisterra; Novais, Carla; Barbara Duarte; Luisa Peixe; Ana R. Freitas. "Study finds raw-type dog foods as a major source of multidrug-resistant bacteria that could potentially colonize humans", PHYS.ORG, 2020, https://phys.org/news/2020-04-raw-type-dog-foods-major-source.html.
  5. Liliana Finisterra; Novais, Carla; Barbara Duarte; Luisa Peixe; Ana R. Freitas. "Raw dog food contains drug resistant bacteria, study finds", MedicalNewsToday, 2020, https://www.medicalnewstoday.com/articles/raw-dog-food-contains-drug-resistant-bacteria-study-finds#Bacteria-resistance-to-key-antibiotics.
  6. Liliana Finisterra; Novais, Carla; Barbara Duarte; Luisa Peixe; Ana R. Freitas. "Pet food can contain drug-resistant bacteria that may pass to humans", NewScientist,, 2020, https://www.newscientist.com/article/2241580-pet-food-can-contain-drug-resistant-bacteria-that-may-pass-to-humans/..
Newspaper article
  1. Antunes, Patricia; Novais, Carla; Peixe ,Luísa. "Press release: Saladas prontas a comer: Fonte de bactérias resistentes", Oje, 2011, http://www.oje.pt/lifestyle/saude-beleza/saladas-prontas-a-comer-fonte-de-bacterias-resistentes.
  2. Novais, Carla; Peixe ,Luísa; Antunes, Patricia. "Saladas prontas a comer: fonte de bactérias resistentes", Semanário Grande Porto, 2011, http://www.pt.cision.com//O4kPTWebNewLayout/ClientUser/GetClippingDetails.aspx?id=75e4392e-93ed-4627-be7f-5b6d1ec7e0ae&analises=1.
  3. Novais, Carla; Antunes P; Peixe L.. "Saladas prontas a comer: fonte de bactérias resistentes", Correio do Minho, 2011, http://www.pt.cision.com//O4kPTWebNewLayout/ClientUser/GetClippingDetails.aspx?id=4e639cb3-dc3d-4013-a7db-0b3181f4f896&analises=1.
  4. Novais, Carla; Peixe L; Antunes P. "Saladas prontas a comer: fonte de bactérias resistentes", Notícias de Viseu, 2011, http://www.pt.cision.com//O4kPTWebNewLayout/ClientUser/GetClippingDetails.aspx?id=0254c854-7ada-4114-b5d1-8e780bbf30f2&analises=1.
Online resource
  1. Novais et al. BioProject PRJNA796949 (Whole genome sequences of Enterococcus faecium). 2023. https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA796949.
  2. Novais et al. BioProject PRJNA948394 (whole genome sequences of Enterococcus faecium, Enterococcus faecalis and Enterococcus lactis). 2023. https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA948394.
  3. Ana Almeida-Santos; Belloso Daza, Mireya Viviana; Novais, Carla; Antonia Read; Alves, Valquíria; Luísa Maria Vieira Peixe; Cocconcelli, Pier Sandro; Ana Raquel Freitas. BioProject PRJNA851953 (whole genome sequences of Enterococcus lactis). 2023. https://www.ncbi.nlm.nih.gov/bioproject/PRJNA851953.
  4. Mireya Viviana Belloso Daz; Ana C. Almeida-Santos; Ana R. Freitas; Novais, Carla; Antonia Read; Alves, Valquíria; Pier Sandro Cocconcelli; Luisa Peixe. BioProject PRJNA851953 of NCBI (whole genome sequences of Enterococcus lactis genomes C1041, C1055, HPH55b, HPH67, HPH133, HPH282, HPH288,. 2022.
  5. Freitas A.R.; Tedim,A.P.; Ana Almeida-Santos; Duarte, Bárbara; Elghaieb,H.; Abbassi,M.S.; Hassen,A.; Novais, Carla; Luisa Peixe. Bioproject PRJNA800622 of NCBI. Enterococcus faecium whole genome sequences of 342T, 361T, 464T, 365T, 465T, 349T, 437T, 508T. 2022. https://www.ncbi.nlm.nih.gov/bioproject/PRJNA800622/.
  6. Tedim, Ana P.; Elghaieb, Houyem; Abbassi, Mohamed S.; Novais, Carla; Hassen A; Peixe, L.; Ana R. Freitas. Enterococcus faecalis strain 612T, whole genome shotgun sequencing project deposited at at DDBJ/ENA/GenBank (Bioproject PRJNA517381). 2019. https://www.ncbi.nlm.nih.gov/nuccore/SEWV00000000.1..
  7. Tedim, Ana P.; Elghaieb H; Abbassi, Mohamed S.; Novais, Carla; Hassen A; Peixe, L.; Ana R. Freitas. Enterococcus faecalis strain 712T, whole genome shotgun sequencing project deposited at at DDBJ/ENA/GenBank (Bioproject PRJNA517381).. 2019. https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA517381.
  8. Tedim, Ana P.; Elghaieb H; Abbassi, Mohamed S.; Novais, Carla; Hassen A; Peixe, L.; Ana R. Freitas. Enterococcus faecalis strain 728T, whole genome shotgun sequencing project deposited at at DDBJ/ENA/GenBank (Bioproject PRJNA517381).. 2019. https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA517381.
  9. Tedim,A.P; Freitas,A.R.; Novais, Carla; Duarte,B.; Elghaieb,H.; Abbassi,M.S.. Enterococcus faecium strain C59, whole genome shotgun sequencing project (Bioproject: PRJNA224116). 2019. https://www.ncbi.nlm.nih.gov/nuccore/NZ_WLYR00000000.1.
  10. Tedim,A.P.; Freitas,A.R.; Novais, Carla; Elghaieb,H.; Abbassi,M.S.; Peixe,L.. Enterococcus faecium strain 2FEZ, whole genome shotgun sequencing project (Bioproject: PRJNA224116). 2019. https://www.ncbi.nlm.nih.gov/nuccore/NZ_WLYP00000000.1.
  11. Tedim,A.P.; Freitas,A.R.; Novais, Carla; Duarte,B.; Elghaieb,H.; Abbassi,M.S.; Peixe,L.. Enterococcus faecium strain 149T, whole genome shotgun sequencing project (Bioproject: PRJNA580369). 2019. https://www.ncbi.nlm.nih.gov/nuccore/NZ_WLYQ00000000.1.
  12. Novais, Carla; Duarte,B.; Pereira,A.P.; Freitas,A.R.; Coque,T.M.; Hammerum,A.M.; Hasman,H.; Antunes,P.; Peixe,L.. Enterococcus faecium strain A5.1A, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCD00000000.
  13. Novais, Carla; Duarte,B.,; Pereira,A.P.,; Freitas,A.R.; Coque,T.M.,; Hammerum,A.M; Hasman,H.; Antunes,P.; Peixe,L. Enterococcus faecium strain SN592, whole genome shotgun sequencing project (BioProject: PRJNA546230).. 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCG00000000.
  14. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 465T, whole genome shotgun sequencing project (BioProject:PRJNA546230).. 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCI00000000.
  15. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 342T, whole genome shotgun sequencing project (Bioproject: PRJNA546230).. 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCH00000000.
  16. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain SN446, whole genome shotgun sequencing project (BioProject: PRJNA546230).. 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCF00000000.
  17. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L.Enterococcus faecium strain 361T, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDE00000000.
  18. Novais, Carla. ovais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L.Enterococcus faecium strain TR10-27, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDF00000000.
  19. Novais, Carla. ovais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M.,Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain SN71, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDG00000000.
  20. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 365T, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDC00000000.
  21. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M.,Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L.Enterococcus faecium strain 365T, whole genome shotgun sequencing project (BioProject:PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDC00000000.
  22. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 508T, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDD00000000.
  23. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 437T, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDB00000000.
  24. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 464T, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFDA00000000.
  25. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain F915, whole genome shotgun sequencing project. (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCZ00000000.
  26. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain C603, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCY00000000.
  27. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain Efm28s, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCW00000000.
  28. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain VE40C2, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCX00000000.
  29. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain Efm33s, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCU00000000.
  30. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain Efm11s, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCV00000000.
  31. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain HST1, whole genome shotgun sequencing project (Bioproject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCT00000000.
  32. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain H323, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCR00000000.
  33. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 446511, whole genome shotgun sequencing project (BioProject: PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCS00000000.
  34. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 164306, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCQ00000000.
  35. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 22797, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCP00000000.
  36. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain M299741, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCO00000000.
  37. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain M260840, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCN00000000.
  38. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain M410399, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCL00000000.
  39. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain M239495, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCM00000000.
  40. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain HPH9, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCK00000000.
  41. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 349T, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCJ00000000.
  42. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain SN504, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCE00000000.
  43. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain F782, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCC00000000.
  44. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain F64, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCB00000000.
  45. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain TR68-31, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFBZ00000000.
  46. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain CCT11, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFBY00000000.
  47. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain R10, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFCA00000000.
  48. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain HD31, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFBW00000000.
  49. Novais, Carla. Novais,C., Duarte,B., Pereira,A.P., Freitas,A.R., Coque,T.M., Hammerum,A.M., Hasman,H., Antunes,P. and Peixe,L. Enterococcus faecium strain 4275, whole genome shotgun sequencing project (BioProject accession number PRJNA546230). 2019. https://www.ncbi.nlm.nih.gov/nuccore/VFBX00000000.
  50. Antunes, Patricia; Campos, Joana; Mourão, Joana; Pereira, Joana; Novais, Carla; Peixe, Luísa. Citrobacter braakii strain TrS59-15 plasmid quinolone resistance protein QnrB90 (qnrB) gene, qnrB90 allele, complete cds.. 2018. https://www.ncbi.nlm.nih.gov/nuccore/MG182074.1.
  51. Freitas, Ana R.; Elghayeb, Houyem; León-Sampedro, Ricardo; Abbassi, Mohamed S.; Novais, Carla; Coque, Teresa M.; Hassen, Abdennaceur; Peixe, Luísa. Enterococcus faecalis strain 12_Tun, whole genome shotgun. 2017. https://www.ncbi.nlm.nih.gov/nuccore/NZ_NHNF00000000.1.
  52. Novais, Carla; Tedim, Ana P.; Lanza, Val F.; Freitas, Ana R.; Silveira, Eduarda; Escada, Ricardo; Roberts, Adam P.; et al. Enterococcus faecium strain TCGEHPH2.1, whole genome shotgun sequencing project. 2017. https://www.ncbi.nlm.nih.gov/nuccore/NZ_MBRI00000000.1.
  53. Novais, Carla; Tedim-Pedrosa, Ana; Lanza, Val F.; Freitas, Ana R.; Silveira, Eduarda; Escada, Ricardo; Roberts, Adam P.; et al. Enterococcus faecium strain HPH2, whole genome shotgun sequencing project. 2017. https://www.ncbi.nlm.nih.gov/nuccore/NZ_MBRH00000000.1.
  54. Novais, Carla; Tedim-Pedrosa, Ana; Lanza, Val F.; Freitas, Ana R.; Silveira, Eduarda; Escada, Ricardo; Roberts, Adam P.; et al. Enterococcus faecium strain GE1, whole genome shotgun sequencing project.. 2017. https://www.ncbi.nlm.nih.gov/nuccore/NZ_MBRG00000000.1.
  55. Gonçalves-Ribeiro, Teresa; Novais, Ângela; Novais, Carla; Silva, R.; Sousa, João C.; Peixe, Luísa; Machado, Elisabete. Citrobacter europaeus strain A121 quinolone resistance protein B73 (qnrB73) gene, complete cds.. 2016. https://www.ncbi.nlm.nih.gov/nuccore/KF443075.1.
  56. Antunes, Patricia; Campos, Joana; Mourão, Joana; Pereira, Joana; Novais, Carla; Peixe, Luísa. Citrobacter sp. TR21_24 qnrB gene for quinolone resistance pentapeptide repeat protein QnrB72, complete CDS.. 2016.
  57. Leon, Ricardo; Novais, Carla; Peixe ,Luísa; Baquero, Fernando; Coque, Teresa M.. Enterococcus faecium strain E240 transposon Tn5801, complete sequence. 2015. http://www.ncbi.nlm.nih.gov/nuccore/KP001176.1.
  58. Novais, Carla; Freitas, Ana R.; Martins, Elsa; Dias, Ana Rita; RIbeiro-Gonçalves, Teresa; Antunes, Patricia; Peixe ,Luísa. Enterococcus faecium strain A59_1A insertion sequence ISEf1 transposase gene, partial cds; penicillin binding protein 5 (pbp5) gene, complete cds; and monovalent cation:proton transporter (napA) gene, partial cds. 2015. http://www.ncbi.nlm.nih.gov/nuccore/KR140013.1.
  59. Novais, Carla; Freitas, Ana R.; Martins, Elsa; Dias, Ana Rita; RIbeiro-Gonçalves, Teresa; Antunes, Patricia; Peixe ,Luísa. Enterococcus faecium strain A17_1B insertion sequence ISEf1 transposase gene, partial cds; penicillin binding protein 5 (pbp5) gene, complete cds; and monovalent cation:proton transporter (napA) gene, partial cds.. 2015. http://www.ncbi.nlm.nih.gov/nuccore/KR140012.1.
  60. Novais, Carla; Freitas, Ana R.; Martins, Elsa; Dias, Ana Rita; RIbeiro-Gonçalves, Teresa; Antunes, Patricia; Peixe ,Luísa. Enterococcus faecium strain A8_1A insertion sequence ISEF1 transposase gene, partial cds; penicillin binding protein 5 (pbp5) gene, complete cds; and monovalent cation:proton transporter (napA) gene, partial cds.. 2015. http://www.ncbi.nlm.nih.gov/nuccore/KR140011.1.
  61. Novais, Carla; Freitas, Ana R.; Martins, Elsa; Dias, Ana Rita; RIbeiro-Gonçalves, Teresa; Antunes, Patricia; Peixe ,Luísa. Enterococcus faecium strain A5_2A histidinol phosphate phosphatase gene, partial cds; and penicillin binding protein 5 (pbp5) gene, complete cds. 2015. http://www.ncbi.nlm.nih.gov/nuccore/KR140010.1.
  62. Freitas, Ana R.; Tedim-Pedrosa, Ana; Francia, Maria V.; Jensen, Lars; Sanchez-Valenzuela, Antonio; Novais, Carla; Peixe ,Luísa; et al. Enterococcus faecium strain AE12 vancomycin resistance operon, complete sequence. 2015. http://www.ncbi.nlm.nih.gov/nuccore/KT201628.1.
  63. Silveira, Eduarda; Marques, Patrice; Freitas, Ana R.; Coque, Teresa M.; Antunes, Patricia; Peixe ,Luísa; Novais, Carla. Enterococcus faecium plasmid p_E241 bifunctional enzyme AAC/APH (aac(6')-Ie-aph(2'')-Ia) gene, partial cds; GNAT family acetyltransferase gene, complete cds; insertion sequences IS256 and IS1216 transposase (tnpA) genes, complete cds; and QacZ (qacZ) gene, complete cds.. 2014. http://www.ncbi.nlm.nih.gov/nuccore/KM083808.1.
  64. Novais, Carla; Peixe, Luísa. Legionella: FACTOS ESSENCIAIS E INFORMAÇÕES PRÁTICAS. 2014. https://sigarra.up.pt/ffup/pt/web_base.gera_pagina?p_pagina=18309.
    10.13140/2.1.1077.4729
  65. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain HPH6 histidinol phosphate phosphatase-like gene, partial sequence; and penicillin-binding protein 5 (pbp5) gene, complete cds. 2013. http://www.ncbi.nlm.nih.gov/nuccore/KC479675.1.
  66. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain H196 insertion sequence ISEf1 transposase gene, partial cds; and penicillin-binding protein 5 (pbp5) gene, complete cds. 2013. http://www.ncbi.nlm.nih.gov/nuccore/KC479673.1.
  67. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain SE97F1 cell envelope-like function transcriptional attenuator common domain protein (psr) gene, partial cds; and penicillin-binding protein 5 (pbp5) gene, complete cds. 2013. http://www.ncbi.nlm.nih.gov/nuccore/KC479676.1.
  68. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain TCH323_3 penicillin-binding protein 5 (pbp5) gene, complete cds. 2013. http://www.ncbi.nlm.nih.gov/nuccore/KC479674.1.
  69. Campos, Joana; Mourão, Joana; Pestana, Nazaré; Peixe ,Luísa; Novais, Carla; Antunes, Patricia. Raoultella terrigena strain S52_90 extended-spectrum beta-lactamase SHV-2 (blaSHV-2) gene, complete cds. 2013.
  70. Campos, Joana; Mourão, Joana; Pestana, Nazaré; Peixe ,Luísa; Novais, Carla; Antunes, Patricia. Citrobacter freundii strain S30_28 QnrB9 (qnrB9) gene, complete cds.. 2013.
  71. Antunes, Patricia; Mourão, Joana; Alves, Tatiana; Campos, Joana; Novais, Carla; Novais, Ângela; Peixe ,Luísa. Salmonella enterica subsp. enterica serovar Bovismorbificans strain HP507391 plasmid IncHI2 In60-like integron, complete sequence.. 2012. http://www.ncbi.nlm.nih.gov/nuccore/JX026665.1.
  72. Gonçalves, Teresa; Novais, Ângela; Novais, Carla; Silva, Ricardo; Sousa, João Carlos; Peixe ,Luísa; Machado, Elisabete. Citrobacter freundii strain A304 quinolone resistance protein B57(qnrB57) gene, complete cds.. 2012. http://www.ncbi.nlm.nih.gov/nuccore/JX259318.1.
  73. Gonçalves, Teresa; Novais, Ângela; Novais, Carla; Silva, Ricardo; Sousa, João Carlos; Peixe ,Luísa; Machado, Elisabete. Citrobacter freundii strain A293 quinolone resistance protein B59 (qnrB59) gene, complete cds.. 2012.
  74. Gonçalves, Teresa; Novais, Ângela; Novais, Carla; Silva, Ricardo; Sousa, João Carlos; Peixe ,Luísa; Machado, Elisabete. Citrobacter freundii strain A60 quinolone resistance protein B58 (qnrB58) gene, complete cds.. 2012. http://www.ncbi.nlm.nih.gov/nuccore/JX259319.1.
  75. Gonçalves, Teresa; Novais, Ângela; Novais, Carla; Silva, Ricardo; Sousa, João Carlos; Peixe ,Luísa; Machado, Elisabete. Citrobacter freundii strain A316 quinolone resistance protein B56 (qnrB56) gene, complete cds.. 2012.
  76. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain TCGE_E4.1 histidinol phosphate phosphatase-like gene, partial sequence; and penicillin-binding protein Pbp5 (pbp5) gene, complete cds. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208889.1.
  77. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain TCGE70411_2 PBP5 synthesis repressor-like (psr) gene, partial sequence; and ISEfm1 transposase, acetyltransferase, histidinol phosphate phosphatase, and penicillin-binding protein Pbp5 (pbp5) genes, complete cds. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208888.1.
  78. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain SN446 insertion sequence ISEfa11, complete sequence. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208887.1.
  79. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain SN194 insertion sequence ISEf1, complete sequence. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208886.1.
  80. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain TCGESN71_1 cell cycle protein FtsW (fstW), PBP 5 synthesis repressor (psr), and penicillin-binding protein Pbp5 (pbp5) genes, complete cds. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208885.1.
  81. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain TCGEE49_1 insertion sequence ISEfa11, complete sequence. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208884.1.
  82. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain 529940 histidinol phosphate phosphatase-like gene, partial sequence; and penicillin-binding protein Pbp5 (pbp5) gene, complete cds. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208883.1.
  83. Novais, Carla; Silveira, Eduarda; Freitas, Ana R.; Escada, Ricardo; Coque, Teresa M.; Peixe ,Luísa. Enterococcus faecium strain 164306 insertion sequence ISEf1, complete sequence. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208882.1.
  84. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus faecalis strain C386 transposon Tn6000, complete sequence. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208881.1.
  85. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus faecium strain A119 transposon Tn6000, partial sequence. 2011. http://www.ncbi.nlm.nih.gov/nuccore/JN208880.1.
  86. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus faecalis plasmid insertion sequence ISEnta1 transposase gene, partial cds; and TetS (tetS) gene, partial cds.. 2011.
  87. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus gallinarum strain F38 plasmid insertion sequence IS1216 transposase gene, partial cds; tetS gene, partial sequence; and TetS gene, partial cds.. 2011.
  88. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus sp. SN151 insertion sequence IS1216 transposase gene, partial cds; tetS gene, complete sequence; TetS and hypothetical protein genes, complete cds; and insertion sequence IS1216 transposase gene, partial cds.. 2011.
  89. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus gallinarum strain F329 plasmid insertion sequence IS1216 transposase gene, partial cds; tetS gene, partial sequence; and TetS gene, partial cds.. 2011.
  90. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus sp. SN373 insertion sequence IS1216 transposase gene, partial cds; cadE gene, complete sequence; tetS gene, partial sequence; and TetS gene, partial cds.. 2011.
  91. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus faecium strain E241 plasmid TetS (tetS) gene, partial cds; and insertion sequence IS1216 transposase gene, partial cds.. 2011.
  92. Novais, Carla; Freitas, Ana R.; Silveira, Eduarda; Baquero, Fernando; Peixe ,Luísa; Roberts, Adam; Coque, Teresa M.. Enterococcus faecalis strain WBH16 plasmid insertion sequence IS1216 transposase gene, partial cds; and TetS (tetS) gene, partial cds.. 2011.
  93. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Werner, Guido; Laverde-Gomez Jenny A; Cantón, Rafael; et al. Enterococcus faecium strain Ef80 plasmid putative glycoside hydrolase (hylEfm) gene, complete cds.. 2010.
  94. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Werner, Guido; Laverde-Gomez Jenny A; Cantón, Rafael; et al. Enterococcus faecium strain E1438 plasmid putative glycoside hydrolase (hylEfm) gene, complete cds.. 2010.
  95. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Werner, Guido; Laverde-Gomez Jenny A; Cantón, Rafael; et al. Enterococcus faecium strain Efm42 plasmid putative glycoside hydrolase (hylEfm) gene, complete cds.. 2010.
  96. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Werner, Guido; Laverde-Gomez Jenny A; Cantón, Rafael; et al. Enterococcus faecium strain Efm49 plasmid putative glycoside hydrolase (hylEfm) gene, complete cds.. 2010.
  97. Freitas, Ana R.; Tedim-Pedrosa, Ana; Novais, Carla; Ruiz-Garbajosa, Patricia; Werner, Guido; Laverde-Gomez Jenny A; Cantón, Rafael; et al. Enterococcus faecium strain 15/02 plasmid putative glycoside hydrolase (hylEfm) gene, complete cds.. 2010.
  98. Novais, Carla; Coque, Teresa M.; Sousa, João Carlos; Baquero, Fernando; Peixe ,Luísa. Enterococcus faecalis strain 229710: insertion sequence ISEf1 transposase gene, complete cds; and transposon Tn1546, partial sequence". Número: EF064799. 2004.
Preprint
  1. Mourão, Joana; Magalhães, Mafalda; Ribeiro-Almeida, Marisa; Rebelo, Andreia; Novais, Carla; Peixe, Luísa; Novais, Ângela; Antunes, Patrícia. "Decoding Klebsiella pneumoniae in Poultry Chain: Unveiling Genetic Landscape, Antibiotic Resistance, and Biocide Tolerance in Non-Clinical Reservoirs". 2024. http://dx.doi.org/10.1101/2024.01.23.576544.
    10.1101/2024.01.23.576544
  2. Mourão, Joana; Ribeiro-Almeida, Marisa; Novais, Carla; Magalhães, Mafalda; Rebelo, Andreia; Ribeiro, Sofia; Peixe, Luísa; Novais, Ângela; Antunes, Patrícia. "From farm to fork: persistence of clinically-relevant multidrug-resistant and copper-tolerantKlebsiella pneumoniaelong after colistin withdrawal in poultry production". 2023. http://dx.doi.org/10.1101/2023.04.03.535403.
    10.1101/2023.04.03.535403
  3. Novais, Carla; Antunes, Patrícia. "Inverted Classes as a Successful Tool to Overcome Teaching and Learning Challenges Imposed by COVID-19 Lockdown to Food Microbiology Laboratory Classes". 2023. https://ssrn.com/abstract=4305703 or http://dx.doi.org/10.2139/ssrn.4305703.
  4. Tedim, Ana P.; Almeida-Santos, Ana C.; Lanza, Val F.; Novais, Carla; Coque, Teresa M.; Freitas, Ana R.; Peixe, Luísa. "Bacteriocin Distribution Patterns inEnterococcus faeciumandEnterococcus lactis:Bioinformatic Analysis Using a Tailored Genomics Framework". 2023. http://dx.doi.org/10.1101/2023.11.13.566347.
    10.1101/2023.11.13.566347
  5. Ribeiro-Almeida, Marisa; Mourão, Joana; Magalhães, Mafalda; Freitas, Ana R.; Novais, Carla; Peixe, Luísa; Antunes, Patricia. "Raw Meat-Based Diet for Pets: A Neglected Source of Human Exposure to <i>Salmonella</i> and <i>Mcr</i>-Carrying <i>Escherichia Coli</i> in Europe". 2023. http://dx.doi.org/10.2139/ssrn.4532439.
    10.2139/ssrn.4532439
  6. Rebelo, Andreia; Duarte, Bárbara; Freitas, Ana R.; Almeida, Agostinho; Azevedo, Rui; Pinto, Edgar; Peixe, Luísa; Antunes, Patricia; Novais, Carla. "Uncovering the Effects of Copper Feed Supplementation on the Selection of Copper-Tolerant and Antibiotic-Resistant Enterococcus in Poultry Production for Sustainable Environmental Practices". 2023. http://dx.doi.org/10.2139/ssrn.4435765.
    10.2139/ssrn.4435765
  7. Pereira, Ana P.; Antunes, Patrícia; Willems, Rob; Corander, Jukka; Coque, Teresa M.; Peixe, Luísa; Freitas, Ana R.; Novais, Carla. "Evolution of chlorhexidine susceptibility and of the EfrEF operon among Enterococcus faecalis from diverse environments, clones and time spans". 2022. http://dx.doi.org/10.1101/2022.01.27.478125.
    10.1101/2022.01.27.478125
  8. Chaguza, Chrispin; Pöntinen, Anna K.; Top, Janetta; Arredondo-Alonso, Sergio; Freitas, Ana R.; Novais, Carla; Torres, Carmen; et al. "The population-level impact of Enterococcus faecalis genetics on intestinal colonisation and extraintestinal infection". 2022. http://dx.doi.org/10.1101/2022.09.26.509451.
    10.1101/2022.09.26.509451
  9. Tedim, Ana P.; Lanza, Val F.; Rodríguez, Concepción M.; Freitas, Ana R.; Novais, Carla; Peixe, Luísa; Baquero, Fernando; Coque, Teresa M.. "Fitness cost of vancomycin-resistant Enterococcus faecium plasmids associated with hospital infection outbreaks". 2021. http://dx.doi.org/10.1101/2021.01.27.428397.
    10.1101/2021.01.27.428397
  10. Freitas, Ana R.; Tedim, Ana P.; Novais, Carla; Peixe, Luísa. "Comparative genomics of globaloptrA-carryingEnterococcus faecalisuncovers common genetic features and a chromosomal hotspot foroptrAacquisition". 2019. http://dx.doi.org/10.1101/785295.
    10.1101/785295
  11. Duarte, Bárbara; Pereira, Ana P.; Freitas, Ana R.; Coque, Teresa M.; Hammerum, Anette M.; Hasman, Henrik; Antunes, Patrícia; Peixe, Luísa; Novais, Carla. "Identification of 2CS-CHXT operon signature of chlorhexidine tolerance among Enterococcus faecium". 2019. http://dx.doi.org/10.1101/704346.
    10.1101/704346
Thesis / Dissertation
  1. "Epidemiologia da resistência aos antibióticos em Enterococcus spp de origem humana, animal e ambiental (Epidemiology of antibiotic resistance in human, animal and environmental Enterococcus spp". PhD, Faculdade de Farmácia. Universidade do Porto, 2005.

Other

Other output
  1. UCIBIO news. Dog food sold across Europe contains antibiotic-resistant bacteria, including “superbugs” found in hospital patients.. 2021. Ana R. Freitas; Novais, Carla; Luisa Peixe. https://www.requimte.pt/ucibio/news/dog-food-sold-across-europe-contains-antibiotic-resistant-bacteria-including-superbugs-found..
  2. UCIBIO News. Nature Communications study maps full evolutionary journey of a leading hospital pathogen. 2021. Novais, Carla; Ana R. Freitas; Luisa Peixe.
  3. New publication unveils accretion of metal and antibiotic resistance in Enterococcus spp. during the last century. 2021. Novais, Carla. https://ucibio.pt/news/new-publication-unveils-accretion-metal-and-antibiotic-resistance-enterococcus-spp-during-last.
  4. UCIBIO news. 1st Workshop MicroMundo@UPorto. 2019. Novais, Carla.
  5. UCIBIO news. BacT_drugs lab implements a global citizen science project - MicroMundo-in Portugal. 2018. Novais, Carla. https://www.requimte.pt/ucibio/news/bactdrugs-lab-implements-global-citizen-science-project-micromundo-portugal.
  6. UCIBIO news. BacT_drugs lab implements a global citizen science project - MicroMundo - in Portugal. 2018. Novais, Carla.
  7. UCIBIO news. Ana Freitas’s publication highlighted as an Editor’s Choice in Journal of Antimicrobial Chemotherapy.. 2017. Ana Raquel Freitas; Elghaieb, Houyem; Novais, Carla; Luisa Peixe. https://www.requimte.pt/ucibio/news/ana-freitass-publication-highlighted-editors-choice-journal-antimicrobial-chemotherapy.
Technical standard
  1. GUIA PARA O ESTABELECIMENTO DE CRITÉRIOS MICROBIOLÓ GICOS EM GÉNEROS ALIMENTÍCIOS. 2017. Novais, Carla. http://repositorio.insa.pt/bitstream/10400.18/4701/3/Guia%20Crit%C3%A9rios%20Microbiol%C3%B3gicos_VFinal_20170413.pdf.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023/09/13 Multidrug-resistant Enterococcus in animals and the environment. 6th International Conference on Enterococci. 6th International Conference on Enterococci.
Faculdade de Farmácia. Universidade do Porto. Porto. Portugal.
2023 Novel insights into healthy humans’ faecal carriage of enterococci: Enterococcus lactis is as a dominant highly bacteriocinogenic species. II Toxrun International Congress 2023
2022/11/22 Resistência a antibióticos: Um problema de saúde pública (Organização: Núcleo de Mobilidade da Associação de Estudantes da Faculdade de Farmácia do Porto-NUMA) Semana mundial da consciencialização do uso de Antibióticos: Ação de sensibilização aos estudantes da FFUP
Faculdade de Farmácia. Universidade do Porto
2022/10/19 Da quinta ao prato: diversidade e persistência de Klebsiella pneumoniae em sistemas de produção intensiva de frango Microbiologia 2022
Sociedade Portuguesa de Microbiologia
2022/10/17 Diferenciação precisa de Enterococcus faecium e Enterococus lactis em fezes de humanos saudáveis indica E. lactis como espécie predominante Microbiologia 2022
Sociedade Portuguesa de Microbiologia
2022/09 First comprehensive reconstruction of the plasmidome of Enterococcus faecalis 13th International Meeting on Microbial Epidemiological Markers (IMMEM XIII)
(United Kingdom)
2022/04/08 Food microbiology classes during confinement: flipped classroom and dynamization of online synchronous activities I Congresso Internacional da TOXRUN juntamente & V Congresso Internacional da Associação Portuguesa
CESPU
2022 Vancomycin-resistant Enterococcus faecium causing hospital infections in Porto, Portugal (2009-2020): a retrospective analysis 32nd European Congress of Clinical Microbiology and Infectious Diseases
(Lisbon)
2021/11/04 Ensino laboratorial da Microbiologia Alimentar em confinamento: aulas invertidas e dinamização das aulas síncronas online Congresso Pedagógico FFUP'21
Faculdade de Farmácia. Universidade do Porto
2021/11 From farm to fork: studying the diversity and persistence of colistin resistant Klebsiella pneumoniae in colistin-free chicken farms Microbiotec21
2021/11 Molecular characterization of vancomycin-resistant Enterococcus faecium causing hospital infections in Porto, Portugal, over the last decade Microbiotec21
2021/07/15 Truncated EfrEF operons highly limit the growth of human ST40 Enterococcus faecalis populations under chlorhexidine stress. World Enterococcus Day-online
2021/07/12 Truncated EfrEF operons highly limit the growth of human ST40 Enterococcus faecalis populations under chlorhexidine stress 31st European Congress of Clinical Microbiology & Infectious Diseases (ECCMID)
2021/07/12 In vitro activity of Quaternary Ammonium Compounds and occurrence of tolerance associated genes among Enterococcus faecalis from diverse origins and timespans 31st European Congress of Clinical Microbiology & Infectious Diseases (ECCMID)
2021/07/12 Occurrence of colistin resistant and copper tolerant Enterobacteriaceae in 2-year colistin-free chicken farms using feed formula with inorganic or organic copper 31st European Congress of Clinical Microbiology & Infectious Diseases (ECCMID)
2021/06 Ecological coalescence of microbiotas and antimicrobial resistance 4th International Caparica Conference in Antibiotic Resistance 2021
2020/11 Occurrence of copper tolerant and antibiotic resistant Enterococcus faecium in poultry farms using feed supplemented with inorganic or organic copper forms (Distinguished with the first prize for the best oral presentation and research project in the category of Integrated Master in Pharmaceutical Sciences) SIFFUP-Simpósio de Investigação FFUP
Pharmacy Faculty. Porto University (Porto)
2020/05 Dispersion of arsenic tolerance genes among antibiotic-resistant Enterococcus spp from several sources and clonal lineages (distinguished as the best oral presentation) One Health EJP Annual Scientific Meeting 2020 (online event)
2019/11/28 WIDESPREAD OF AMPICILLIN-MULTIDRUG-RESISTANT Enterococcus faecium IN RAW CHICKEN MEAT. (Distinguished with the first prize for the best oral presentation and research project in the category of Integrated Master in Pharmaceutical Sciences). SIFFUP-Simpósio de Investigação FFUP
(Porto, Portugal)
2019/04/03 Mecanismos de resistência aos antibióticos e estratégias para a sua redução. (Keynote) I Jornadas dos Serviços Farmacêuticos do Hospital de Braga
(Braga, Portugal)
2019 Non-typhoidal Salmonella serotypes adapted to diverse stresses in a poultry meat processing unit in Portugal IJUP 2019 – Encontro de Investigação Jovem
Universidade do Porto (Porto, Portugal)
2019 Linezolid-resistant Enterococcus faecium carrying identical Tn6246:fexB-poxtA in humans and bovines from different continents. 29th European Congress of Clinical Microbiology and Infectious Diseases. Amsterdam, Netherlands.
(Amesterdam, Netherlands)
2018 Spread of arsenic tolerance genes among Salmonella enterica serotype 4,[5],12:i:- major European clone IJUP2018- Encontro de Investigação Jovem
Universidade do Porto (Porto, Portugal)
2018 From farm to fork: dissemination of Tn554::fexA-optrA in linezolid-resistant Enterococcus faecalis clones from chicken faeces and meat in Tunisia 28th European Congress of Clinical Microbiology & Infectious Diseases
(Madrid, Spain)
2018 Successful multidrug-resistant and copper-tolerant Salmonella clones are enriched in arsenic tolerance genes International Symposium Salmonella and Salmonellosis (I3S)
(Saint Malo, France)
2018 Copper tolerance in Enterococcus faecium and Staphylococcus aureus: the role of a multicopper oxidase encoded by cueO gene Encontro Anual da UCIBIO (Unidade de Ciências Biomoleculares Aplicadas)
UCIBIO (Unidade de Ciências Biomoleculares Aplicadas) (Costa da Caparica, Portugal)
2017 Assessment of FT-IR resolution to discriminate L. monocytogenes cells exposed to temperatures linked to food processing chain. Microbiotec 2017
Sociedade Portuguesa de Microbiologia (Porto, Portugal)
2015 Filling the map for antimicrobial resistance in sub-Saharan Africa: ampicillin resistant enterococci from non-clinical sources of Angola IJUP 2015- Encontro de Investigação Jovem
Universidade do Porto (Porto, Portugal)
2015 Clonal dissemination of clinically relevant multidrug-resistant Salmonella Typhimurium, S. 4,[5],12:i:- and S. Rissen in Portugal IJUP2015- Encontro da Investigação Jovem
Universidade do Porto (Porto, Portugal)
2015 Detección de Tn5801 (tetM) en Enterococcus y análisis de su historia evolutiva a partir de otros patógenos oportunistas Gram positivos. XIX Congreso Nacional de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica
(Sevilla, Spain)
2015 Resistencia a mercurio (merA) en Enterococcus de niños expuestos a contaminación medioambiental y análisis de diversidad y evolvabilidad de elementos mercuriales en Gram positivos. XIX Congreso Nacional de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica
(Sevilha, Spain)
2015 Os produtos de origem animal na transmissão da antibioresistência. (Keynote) Jornadas de Segurança Alimentar e Saúde Pública
Centro de Estudos de Ciência Animal e Veterinária (CECAV) (Vila Real, Portugal)
2014 Screening for Virulence Factors in Swine Enterococcus faecium Strains with Zoonotic Potential IJUP2014- Encontro da Investigação Jovem
Universidade do Porto (Porto, Portugal)
2014 Antibiotic resistance, copper and mercury tolerance genes are carried by RepA-N pLG1-like megaplasmids among Enterococcus from several origins and clones 24th European Congress Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Barcelona, Spain)
2014 Contribution of copper tolerance for emergence and success of multidrug resistant Salmonella enterica serotype 4,[5],12:i:- clones 9th International Copper Meeting
(Vico Equense, Italy)
2014 Avaliação da Qualidade de Conservas de Sardinha após Abertura XX Encontro Luso-Galego de Química
Sociedade Portuguesa de Química (Porto, Portugal)
2013 Rainbow trouts containing enterococcus with virulence factors, antibiotic and biocide resistance genes: can your dinner be a matter of concern? IJUP- 6º Encontro da Investigação Jovem da Universidade do Porto
(Porto, Portugal)
2013 Ready-to-eat salads a vehicle of bacteria and clinically relevant antibiotic resistance genes IJUP-6º Encontro de Investigação Jovem da Universidade do Porto.
(Porto, Portugal)
2012 Molecular and phenotypic characteristics of the emerging Salmonella enterica serotype 4,5,12:i:- (monophasic variant of S. Typhimurium) from Portugal IJUP'12. Investigação Jovem da U. Porto
Universidade do Porto (Porto, Portugal)
2012 Occurrence of antibiotic-resistant enterococci from antibiotic-free trout aquacultures 22nd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
European Society of Clinical Microbiology and Infectious Diseases (London)
2012 Occurrence of biocide resistance genes in multidrug resistant salmonella, including in the emerging clonal lineages of S. Rissen and S. Typhimurium monophasic variant. 35th International Congress of the Society for the Microbial Ecology and Disease (SOMED)
(Valencia, Spain)
2011 Spread of vancomycin-resistance among Enterococcus faecalis: the influence of pAD1 and Inc18-plasmids (1987-2005) 21st ECCMID/27thICC
European Society of Microbiology (Milan, Italy)
2011 Tracking antibiotic resistance along the Silk Road 21st ECCMID/27th ICC
European Society Microbiology (Milan, Italy)
2011 Evolution of antibiotic resistance in enterococci: the role of conjugative genetic elements. (Keynote) Research Seminars Series
Eastman Dental Institute. University College of London. (London, United Kingdom)
2011 Resistências aos antibióticos em Bactérias Gram positivo (MRSA, VRSA, VRE). (Keynote) 20º ENCONTRO CIENTÍFICO APAC. "Acrescentar valor ao laboratório clínico"
Associação Portuguesa de Analistas Clínicos (Luso, Portugal)
2010 Diseminación global de megaplásmidos portadores de hylEfm en cepas internacionales de Enterococcus faecium CC17 XIV Congreso de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica
(Barcelona, Spain)
2010 Influence of pAD1 and Inc18-plasmids in the worldwide spread of vancomycin- resistant Enterococcus faecalis outbreak strains (1987-2005) 3rd ASM Conference on Enterococci
American Socieity Microbiology (ASM) (Portland, United States)
2010 Epidemiologia da resistência aos glicopéptidos em Enterococcus spp de origem hospitalar. (Keynote) Clones, genes e elementos genéticos móveis: peças do puzzle da resistência a antibióticos
Faculdade de Farmácia. Universidade do Porto (Porto, Portugal)
2010 Contribuição do meio ambiente para a origem e difusão da resistência aos antibióticos. (Keynote) V Congresso Científico da AEFFUP-Antibióticos, uma abordagem complementar.
Faculdade de Farmácia. Universidade do Porto (Porto, Portugal)
2009 Portuguese piggeries as reservoir of antibiotic multi-resistant enterococci/ International spread of vancomycin-resistant Enterococcus faecium (CC17, CC5) and Enterococcus faecalis CC2 among animals and humans 1º Encontro Parcerias para a Investigação
(Vairão-Portugal, Portugal)
2009 A resistência aos antibióticos. (Keynote) 1ªs Jornadas Cientificas de Farmácia Comunitária.
Grupo Profissional de Farmácia de Oficina da Ordem dos Farmaceuticos. Ordem dos Farmacêuticos (VilaMoura, Portugal)
2009 Epidemiologia da resistência aos glicopéptidos em Enterococcus spp de origem hospitalar. (Keynote) Resistência à Antibioterapia-Fungos e Bactérias
Universidade da Beira Interior (Covilhã, Portugal)
2008 Uretrites e cervicites gonocócicas. (Keynote) I Workshop de Doenças Sexualmente transmíssiveis.
Universidade Fernando Pessoa (Ponte de Lima, Portugal)
2007 Multi-drug resistant enterococci among Portuguese swine after growth promoter ban 17th European Congress of Clinical Microbiology and Infections Diseases
(Munich, Germany)
2007 A Importância do antibiograma. (Keynote) Carla Novais
Universidade Fernando Pessoa (Porto, Portugal)
2007 Uretrites e cervicites gonocócicas. (Keynote) Seminário de Doenças Sexualmente Transmissíveis
Universidade Fernando Pessoa (Porto, Portugal)
2005 Persistence of vancomycin-resistant Enterococcus faecium isolates belonging to C1 lineage in a healthy human volunteers during a 4 year period 15th European Congress of Clinical Microbiology and Infections Diseases
( Copenhagen, Denmark)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2022/10 - Current SAFESURFACES: Correlation of sanitizing practices with selection and persistence of biocide tolerant and antibiotic resistant bacteria in food production surfaces
Co-supervisor of Andreia Liliana da Silva Peixoto
 Doutoramento em Ciências do Consumo Alimentar e Nutrição (PhD)
Faculdade de Ciências da Nutrição e Alimentação da Universidade do Porto, Portugal
2022/10 - Current Pesquisa de bactérias tolerantes a compostos de amónio quaternário e resistentes a antibióticos em águas de três rios com níveis de poluição distintos
Supervisor of Cátia Matos
 Mestrado em Controlo de Qualidade (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2021/07 - Current Avaliação da persistência de Enterobacteriaceae com potencial zoonótico em aves de produção intensiva: da exploração à carne de aves
Co-supervisor of Tatiana Mafalda Ferreira Magalhães
 Mestrado das Ciências do Consumo e Nutrição (Master)
Faculdade de Ciências da Nutrição e Alimentação da Universidade do Porto, Portugal

Faculdade de Ciências da Universidade do Porto, Portugal
2021/03 - Current Understanding the plasmidome and bacteriocinome of human contemporary Enterococcus spp. for future targeted therapies against multidrug-resistant infections (FCT fellowship)
Co-supervisor of Ana Cristina Santos
 PhD program in Pharmaceutical Sciences (Doutoramento) (PhD)
Faculdade de Farmácia da Universidade do Porto, Portugal
2019/11/01 - Current Adaptation of Enterococcus to dynamic environments: impact of biocides on the epidemiology of tolerant populations and resistance to antibiotics. (FCT fellowship: SFRH/BD/144401/2019)
Supervisor of Ana Paula Fernandes Pereira
 PhD program in Pharmaceutical Sciences (PhD)
UCIBIO_REQUIMTE. Faculdade de Farmácia. Universidade do Porto, Portugal
2019/11 - Current Avaliação de bactérias multi-resistentes aos antibióticos num hospital do Norte de Portugal. (Monograph)
Co-supervisor of Ana Ferreira
 Mestrado em Análises Clínicas (Master)
Faculdade de Farmácia da Universidade do Porto, Portugal
2019 - Current Caracterização de Enterococcus resistentes a antibióticos oriundos de alimentos para animais de estimação.
Co-supervisor of Liliana Barroso Finisterra
 Seminário integrado no Mestrado de Controlo de Qualidade (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2018 - Current Cross-stress response of zoonotic bacteria to copper, acid and anaerobiosis: implications for pig-production and food safety. (FCT fellowship: SFRH/BD/137100/201).
Supervisor of Andreia Rebelo
 PhD Program in Environmental Contamination and Toxicology (PhD)
UCIBIO_REQUIMTE. Faculdade de Farmácia. Universidade do Porto, Portugal
2016 - Current Estudo da resistência a compostos antimicrobianos em Enterococcus spp de diferentes origens.
Supervisor of Bárbara Duarte
 Investigação Livre (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2023/04 - 2023/07 Comparative genomic characterization of Enterococcus faecium clinical strains from patients with bacteremia. Student: Paula Bierge Cabrera (Institut d’Investigació i Innovació Parc Taulí (I3PT) – Hospital Universitari Parc Taulí, Sabadell. Doctoral Program in Medicina da Universitat Autònoma de Barcelona, Espanha). Work carried out during the international exchange.
Supervisor
2022/07/18 - 2022/08/05 "Methods to determine minimum inhibitory concentrations and minimum bactericide concentrations of biocides."- Supervision of a three weeks period in Pharmacy Faculty Porto University.
Supervisor of Carolina Lopez Lopez
Fundación para la Investigación Biomédica del Hospital Universitario Ramón y Cajal, Spain
2022/06/06 - 2022/07/31 "Comparative genomic characterization of Enterococcus faecium clinical strains from patients with bacteremia"- Supervision of a two month period in Pharmacy Faculty, Porto University.
Supervisor of Paula Bierge Cabrera
University Hospital Parc Taulí , Spain
2022/03 - 2022/06 Impact of inorganic and organic copper feed formulations in the selection of copper tolerant MDR Enteropcoccus spp from poultry farms and meat (investigação livre integrada nio núcleo de investigação da FFUP)
Supervisor of Stephanie Gonçalves Martins
Faculdade de Farmácia. Universidade do Porto, Portugal
2021/07/19 - 2021/09/30 Study of quaternary ammonium compounds activity against Enterococcus spp.
Supervisor of Beatriz Gómez Martínez
IPSF-Student Exchange Program of International Pharmaceutical Students' Federation (Other)
Pharmacy Faculty. Murcia University, Spain
2021/02 - 2021/07 Caraterização de Enterococcus spp. provenientes de pacientes hospitalizados antes e em diferentes fases da pandemica Covid-19
Co-supervisor of Maria Manuel Moura Cabral
 Licenciatura em Bioquímica-Relatório de Projeto/Estágio (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2019/09 - 2020/10 Epidemiologia, patologia, diagnóstico e tratamento de Helicobacter pylori. (Monograph)
Supervisor of Margarida Maia
 Mestrado em Análises Clínicas (Master)
Faculdade de Farmácia da Universidade do Porto, Portugal
2019 - 2020/10 Qualidade e segurança microbiológica de alimentos disponíveis no mercado para animais de estimação (Master Seminar)
Co-supervisor of Liliana Barroso Finisterra
 Mestrado em Controlo de Qualidade (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2020/02 - 2020/07 Occurrence of copper tolerant and antibiotic resistant Enterococcus faecium in poultry farms using feed supplemented with inorganic or organic copper forms. (Experimental research associated with Project I curricular unit)
Supervisor of Carina da Cunha Baptista
 Integrated master in Pharmaceutical Sciences. (Scientific initiation)
Universidade do Porto Faculdade de Farmácia, Portugal
2019/11 - 2020/02 Multidrug-resistant high-risk Enterococcus faecium clones: can we really define them? (PhD Seminar)
Supervisor of Ana Paula Pereira
 Seminário integrado no Programa Doutoral em Ciências Farmacêutcias (Doutoramento) (Other)
Faculdade de Farmácia da Universidade do Porto, Portugal
2019/06 - 2019/08 Evaluation of acid tolerance among Enterococcus faecium and Salmonella enterica from different origins
Supervisor of Ana María Rubí Callejón (Universidad de Granada)
 Erasmus + program (Other)
Faculdade de Farmácia da Universidade do Porto, Portugal
2019/01 - 2019/07 Resistência à ampicilina em Enterococcus faecium obtidos de carcaças de frangos. (Experimental research associated with Project I Curricular Unit).
Supervisor of Carolina Ferreira
 Mestrado Integrado em Ciências Farmacêuticas (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2018 - 2018 Avaliação da susceptibilidade de Enterococcus spp a diferentes compostos com atividade antimicrobiana
Supervisor of Carolina Ferreira
 Free research not associated with a degree (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2018 - 2018 Study of enterococci resistant to clinical relevant antibiotics in poultry meat samples.
Supervisor of Christopher Scholes (University of Strathclyde)
 Erasmus Program (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2018 - 2018 Typing of Enterococcus faecalis resistant to vancomycin from Brasil
Co-supervisor of Emília Oliveira
 Mestrado em Ciências Biológicas. Intercâmbio com Universidade Federal do Rio Grande do Norte, Brasil) (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal

Universidade Federal do Rio Grande do Norte, Brazil
2016 - 2018 Impact of arsenic in the selection of Salmonella emergent clones.
Co-supervisor of Joana Vanessa Cordeiro Melro Mourão
 Post-Doc contract associted with the project NORTE-01-0145-FEDER-000024, reference HEALTH_RL2_PHD_MICRO_01_2º. (Other)
UCIBIO_REQUIMTE. Faculdade de Farmácia. Universidade do Porto, Portugal
2017 - 2017 O que estamos a perder quando os valores de cut-off (ECOFF) não são usados para avaliar os fenótipos de susceptibilidade à ampicilina em Enterococcus faecium? (Experimental research associated with Project I Curricular Unit).)
Supervisor of Ana Paula Pereira
 Mestrado Integrado em Ciências Farmacêuticas (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 - 2016 Temporal shifts of clinical vancomycin-resistant Enterococcus faecium. (Experimental research associated with Project I Curricular Unit).
Supervisor of Sara Aguiar
 Mestrado Integrado em Ciências Farmacêuticas (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 - 2016 Estudo dos fatores que promovem a transferência horizontal da resistência à ampicilina em Enterococcus faecium: optimização de um protocolo.
Supervisor of Flávia Mendes
 Estágio da Licenciatura em Bioquímica (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 - 2016 Impact of anaerobiosis in the transfer of ampicillin resistance among Enterococcus faecium
Supervisor of Chloe Allison (University of Strathclyde)
 Erasmus Program (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 - 2016 Impacto do uso de arsénio na seleção de Enterococcus spp e Salmonella com interesse clínico: uma abordagem microbiológica e química
Co-supervisor of Andreia Carina Martins Rebelo
 Master fellowship contract. (Other)
REQUIMTE. Lab. de Microbiologia. Faculdade de Farmácia. Universidade Porto, Portugal
2016 - 2016 High rates of colonisation by ampicillin-resistant enterococci in residents of long-term care facilities in Porto, Portugal.
Supervisor of Ana Paula Pereira
 Free research not associated with a degree (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 - 2016 High rates of colonisation by ampicillin-resistant enterococci in residents of long-term care facilities in Porto, Portugal.
Supervisor of Bárbara Martins
 Investigação Livre (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 - 2016 Contribution of biocide to the selection of salmonella non-typhoid resistant to the antibiotics: a multilayered approach. (FCT fellowship: SFRH/BD/77518/2011).
Co-supervisor of Joana Vanessa Cordeiro Melro Mourão
PhD program in Pharmaceutical Sciences (PhD)
Faculdade de Farmácia. Universidade do Porto, Portugal
2015 - 2015 Pesquisa de Enterococcus faecium resistentes à ampicilina ou vancomicina provenientes de diversos nichos ecológicos de Angola. (Experimental research associated with Project I Curricular Unit).
Supervisor of Ana Rita Dias
 Mestrado Integrado em Ciências Farmacêuticas (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2015 - 2015 Evaluation of copper susceptibility of Salmonella and Enterococcus faecium under aerobic and anoxic conditions
Supervisor of Jennifer Rae
 Erasmus Program (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2014 - 2014 Extended Virulence Profile of Enterococcus faecium from Swine (Europe/USA, 1998-2008). (Experimental research associated with Project I Curricular Unit).
Supervisor of Elsa Martins
 Mestrado Integrado em Ciências Farmacêuticas (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2014 - 2014 Characterization of mercury tolerance determinants in Enterococcus spp from children.
Supervisor of Antonio Sanchez Velenzuela
 Pos-Doc (Contrato postdoctoral Sara Borrell. Subdirección General de Evaluación y Fomento de la Investigación. Instituto de Salud Carlos III. Ministerio de Ciencia y Innovación. (Responsável: Teresa M. Coque). Orientador do trabalho num perí (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal

Hospital Ramón y Caja, Madrid, Spain, Spain
2013 - 2014 Avaliação do prazo de validade de conservas após abertura.
Co-supervisor of Vânia Pereira
 Mestrado em Controlo de Qualidade (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 - 2014 Epidemiologia da resistência aos antibióticos e biocidas em Enterococcus spp e Staphylococcus epidermidis
Supervisor of Mariana Barros
 Free research (not associated with a degree) (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2010 - 2014 Tolerância a biocidas e dispersão da resistência a antibióticos: uma abordagem fenotípica e molecular em Enterococcus spp de diferentes origens. (FCT fellowship: SFRH/BD/63955/2009
Supervisor of Eduarda Silveira
 PhD program in Pharmaceutical Sciences (PhD)
REQUIMTE. Lab. de Microbiologia. Faculdade de Farmácia. Universidade Porto, Portugal
2013 - 2013 Search of Quaternary Ammonium Compounds tolerance genes among Enterococcus spp. and their relation with Antibiotic Resistance. (Experimental research associated with Project I Curricular Unit).
Supervisor of Patrice Gomes Marques
 Mestrado Integrado em Ciências Farmacêuticas (Scientific initiation)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 - 2013 Avaliação do Prazo de Validade de Alimentos - Conceitos e metodologias . (Seminar curricular unit)
Co-supervisor of Vânia Pereira
 Mestrado em Controlo de Qualidade (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 - 2012 Pesquisa de Enterococcus spp resistentes a antibióticos com interesse clínico de truticulturas do Norte de Portugal. (Experimental project equivalent to monograph)
Supervisor of Joana Fonte
 Mestrado Integrado em Ciências Farmacêuticas (Master)
Universidade Fernando Pessoa, Portugal
2012 - 2012 Doenças de origem alimentar associadas a bactérias. (Monograph)
Supervisor of Ana Regina de Freitas Alves
 Monografia (Mestrado Integrado em Ciências Farmacêuticas) (Master)
Universidade Fernando Pessoa, Portugal
2011 - 2012 Disseminação horizontal de elementos de inserção cromossomal associados à resistência à ampicilina em Enterococcus faecium oriundos de diferentes nichos ecológicos.
Supervisor of Ricardo Escada
 Mestrado em Microbiologia Clínica (Master)
Universidade Fernando Pessoa, Portugal
2011 - 2011 Pesquisa de genes que conferem resistência aos Compostos de Amónio Quaternário em Enterococcus spp oriundos de diferentes nichos ecológicos. (Experimental project equivalent to monograph)
Supervisor of Natalina Maria Rodrigues
 Mestrado Integrado em Ciências Farmacêuticas (Master)
Universidade Fernando Pessoa, Portugal
2010 - 2010 Associação da resistência a metais e a antibióticos em Enterococcus spp de origem animal. (Experimental project equivalent to monograph).
Supervisor of Francisca Gomes
 Mestrado Integrado em Ciências Farmacêuticas (Master)
Universidade Fernando Pessoa, Portugal
2009 - 2009 Disseminação ambiental de bactérias e genes que conferem resistência a antibióticos e o seu possível impacto na saúde pública (monography).
Supervisor of Eduarda Silveira
 Curso de Ciências Farmacêuticas (Degree)
Universidade Fernando Pessoa, Portugal
2009 - 2009 Avaliação da disseminação horizontal de pbp5 em isolados de Enterococcus spp resistentes a beta-lactâmicos de origem humana, animal e ambiental (Experimental project equivalent to monograph).
Supervisor of Vânia Catarina Cruz de Sá
 Curso de Ciências Farmacêuticas (Degree)
Universidade Fernando Pessoa, Portugal
2009 - 2009 Disseminação horizontal de genes que conferem resistência à tetraciclina em isolados de Enterococcus spp de origem humana e animal (Experimental project equivalent to monograph)
Supervisor of Lara Filipa Sampaio Moreira
 Curso de Ciências Farmacêuticas (Degree)
Universidade Fernando Pessoa, Portugal
2009 - 2009 Pesquisa de genes de resistência a inibidores da síntese proteica em Enterococcus spp de origem animal (Experimental project equivalent to monograph)
Supervisor of Ana Cristina Martins Nogueira
 Curso de Ciências Farmacêuticas (Degree)
Universidade Fernando Pessoa, Portugal
2009 - 2009 Estudo da susceptibilidade a antibióticos em Enterococcus spp oriundos do ambiente de suiniculturas Portuguesas (Experimental project equivalent to monograph)
Supervisor of Ana Isabel Gonçalves Silva Ferraz Dias
 Curso de Ciências Farmacêuticas (Degree)
Universidade Fernando Pessoa, Portugal
2009 - 2009 Staphylococcus aureus meticilina resistentes: A comunidade e o Hospital (monograph)
Supervisor of Dina Maria Afonso da Rocha
 Análises Clínicas e Saúde Pública (Degree)
Universidade Fernando Pessoa, Portugal
2007 - 2007 Fascite Necrozante (monograph)
Supervisor of Tânia Chaves Rodrigues
 Análises Clínicas e Saúde Pública (Degree)
Universidade Fernando Pessoa, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2023 - 2023 Novais C, Antunes P, Freitas AR, Grosso F, Gonçalves T, Novais A, Peixe L. 2023. Sessão de abertura da 5ª Edição do Projeto MicroMundo@UPorto. 23 de Novembro (2h). Faculdade de Farmácia. Universidade do Porto, Porto, Portugal. (2023 - 2023)
2023 - 2023 Novais C, Antunes P, Freitas AR, Grosso F, Gonçalves T, Novais A, Peixe L. 2023. Organização das Sessões de Formação Laboratorial da 5ª edição do Projeto MicroMundo@UPorto. Porto, 7 e 13 de Dezembro (4 horas). Faculdade de Farmácia. Universidade do Porto, Porto, Portugal. (2023 - 2023)
2022/10/27 - 2022/10/27 Dia do Laboratório de Microbiologia 2022 (2022/10/27 - 2022/10/27)
Symposium (Member of the Organising Committee)
 Faculdade de Farmácia. Universidade do Porto, Portugal
2019/11/15 - 2019/11/15 Dia do Laboratório de Microbiologia 2019 (2019/11/15 - 2019/11/15)
Meeting (Member of the Organising Committee)
 Faculdade de Farmácia da Universidade do Porto, Portugal
2019/07/19 - 2019/07/19 1º Workshop MicroMundo@UPorto (2019/07/19 - 2019/07/19)
Workshop (Member of the Organising Committee)
 Faculdade de Farmácia. Universidade do Porto., Portugal
2018 - 2018 Sessão de abertura do projeto MicroMundo@U.Porto (2018/11 - 2018/11)
Other (Member of the Organising Committee)
 Faculdade de Farmácia da Universidade do Porto, Portugal
2011 - 2011 II Edição dos Seminários em Microbiologia Clínica (2011 - 2011)
Seminar (Member of the Organising Committee)
 Universidade Fernando Pessoa, Portugal
2011 - 2011 INSTRUMENTOS DE APOIO À INVESTIGAÇÃO (2011 - 2011)
Workshop (Member of the Organising Committee)
 Universidade Fernando Pessoa, Portugal
2008 - 2008 Seminários em Microbiologia (2008 - 2008)
Seminar (Member of the Organising Committee)
 Universidade Fernando Pessoa, Portugal
2008 - 2008 II Edição do Curso de Antimicrobianos (2008 - 2008)
Other (Member of the Organising Committee)
 Universidade Fernando Pessoa, Portugal
2007 - 2007 I Edição do Curso de Antimicrobianos (2007 - 2007)
Other (Member of the Organising Committee)
 Universidade Fernando Pessoa, Portugal
2006 - 2006 Curso de Antibioterapia (2006 - 2006)
Other (Member of the Organising Committee)
 Universidade Fernando Pessoa, Portugal

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2022/10/22 - Current Moderator of Sessão IV (Tratamento e desenvolvimento de resistências) of Dia do Laboratório de Microbiologia 2022.
Conference
 Dia do Laboratório de Microbiologia 2022
Faculdade de Farmácia. Universidade do Porto, Portugal
2023 - 2023 Moderation of the Health Sciences Session.
Congress
 16ª edição do Investigação Jovem da Universidade do Porto. Universidade do Porto.
2022/05/06 - 2022/05/06 Evaluator of posters (Health Sciences area)
Congress
 15ª edição do Investigação Jovem da Universidade do Porto ´22
Universidade do Porto, Portugal
2022/05/05 - 2022/05/05 Session moderator (Health Sciences area)
Congress
 15ª edição do Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2022/01/26 - 2022/01/26 Pedagogical training: Exercicios temporizados-utilização e configuração
Workshop
 Exercicios temporizados-utilização e configuração
Universidade do Porto, Portugal
2021/12/17 - 2021/12/17 Pedagogical training: Ferramentas Colaborativas Google U.Porto.
Workshop
 Ferramentas Colaborativas Google U.Porto.
Universidade do Porto, Portugal
2021/12/16 - 2021/12/16 Pedagogical training: Salas de aula omnipresentes.
Workshop
 Salas de aula omnipresentes.
Universidade do Porto, Portugal
2021/07/15 - 2021/07/15 World Enterococcus Day-online
Conference
 World Enterococcus Day-online
2021/05/05 - 2021/05/07 Health Sciences session moderator
Meeting
 IJUP 21- 14º Encontro de Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2020/10/29 - 2020/10/29 Pedagogical training: Ludificação da aprendizagem: técnicas e ferramentas simples para utilizar jogos nas aulas
Workshop
 Ludificação da aprendizagem: técnicas e ferramentas simples para utilizar jogos nas aulas
Universidade do Porto, Portugal
2020/10/28 - 2020/10/28 Pedagogical training: The Hybrid Classroom of the Future
Workshop
 The Hybrid Classroom of the Future
Journal of Visualized Experiments, United States
2020/10/21 - 2020/10/21 Building better breakpoints: data and methods needed to determine breakpoints for new agents (online).
Workshop
 Building better breakpoints: data and methods needed to determine breakpoints for new agents (online).
Global Antibiotic Research and Development Partnership, Switzerland
2020/10/20 - 2020/10/20 Pedagogical training: Reimagining a Field Course for Virtual Deliver
Workshop
 Reimagining a Field Course for Virtual Deliver
Journal of Visualized Experiments, United States
2020/05/27 - 2020/05/29 One Health EJP Annual Scientific Meeting 2020 (OHEJP ASM 2020), Online event
Conference
 One Health EJP Annual Scientific Meeting 2020 (OHEJP ASM 2020), Online event
2020/02 - 2020/02 Health Sciences session moderator
Meeting
 IJUP 20- 13º Encontro de Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2019/11/28 - 2019/11/28 1º SIMPÓSIO INIAV PARA A SEGURANÇA ALIMENTAR “RUMO À ALIMENTAÇÃO DO FUTURO”
Symposium
 1º SIMPÓSIO INIAV PARA A SEGURANÇA ALIMENTAR “RUMO À ALIMENTAÇÃO DO FUTURO”
Instituto Nacional de Investigação Agrária e Veterinária, Portugal
2019/11/15 - 2019/11/15 Session Moderator of "Microbiology: New Techonologies" at the Meeting "Dia do Laboratório de Microbiologia 2019".
Meeting
 Dia do Laboratório de Microbiologia 2019
Faculdade de Farmácia da Universidade do Porto, Portugal
2019/06/12 - 2019/06/12 Pedagogical training: "Metodologia de Case Study-Um aliado pedagógico"
Workshop
 Metodologia de Case Study-Um aliado pedagógico
2019/04/13 - 2019/04/16 29th European Congress of Clinical Microbiology and Infectious Diseases (participação)
Congress
 29th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases, Germany
2019/04/14 - 2019/04/14 "You can teach an old dog new tricks!”: rethinking the zoonotic potential of well-known bacteria"-SY091 (Moderador, 29th European Congress of Clinical Microbiology and Infection)
Congress
 29th European Congress of Clinical Microbiology & Infectious Diseases
2019/04 - 2019/04 17ª Mostra da Universidade do Porto. Participação na divulgação do Curso de Ciências Farmacêuticas da Universidade do Porto
Exhibition
 17ª Mostra da Universidade do Porto
Universidade do Porto, Portugal
2019 - 2019 Health Sciences VIII ( Session Moderator)
Meeting
 12º Encontro de Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2019 - 2019 Poster discussion (Guest juri)
Meeting
 12º Encontro de Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2018 - 2018 IJUP 2018- Sessão Health Sciences (Session Moderator)
Meeting
 11ª Encontro de Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2018 - 2018 Workshop de la red SWI@Spain 2018
Workshop
 Workshop de la red SWI@Spain 2018
2018 - 2018 SIMPOSIO SWI@Spain
Symposium
 SIMPOSIO SWI@Spain
2018 - 2018 Como Comunicar Ciência? por Raquel Branquinho
Workshop
 Sessão de abertura do projeto MicroMundo@UPorto.
2018 - 2018 Encontro anual UCIBIO (Unidade de Ciências Biomoleculares Aplicadas)
Meeting
REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
2017/07/16 - 2017/07/18 Course-Taller Small World Initiative/MicroMundo Partner Instructor (allowing to participate as Instructor in the Tiny Earth/MicroMundo project)
Other
Universidad Complutense de Madrid, Spain
2017/04 - 2017/04 15ª Mostra da Universidade do Porto. Participação na divulgação do Curso de Ciências Farmacêuticas da Universidade do Porto
Exhibition
 15ª Mostra da Universidade do Porto.
Universidade do Porto, Portugal
2017 - 2017 Public Health and Epidemiology I (Session Moderator)
Meeting
 IJUP- Enocntro de Investigação Jovem da Universidade do Porto
2017 - 2017 Public Health and Epidemiology II (Session Moderator)
Meeting
 IJUP-Investigação Jovem da Universidade do Porto
2017 - 2017 27th European Congress of Clinical Microbiology and Infectious Diseases
Congress
European Society of Microbiology and Infeectious Diseases, Portugal
2016 - 2016 Public Health and Epidemiology I (Session Moderator)
Meeting
 9º Encontro Investigação Jovem da Universidade do Porto-IJUP
Universidade do Porto, Portugal
2016 - 2016 Public Health and Epidemiology II (Session Moderator)
Meeting
 9º Encontro Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2016 - 2016 Posters discussion (Guest juri)
Meeting
 9º Encontro Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2016 - 2016 11th International Meeting on Microbial Epidemiological Markers
Congress
European Society of Microbiology and Infectious Diseases, Portugal
2015/03 - 2015/03 13ª Mostra da Universidade do Porto. Participação na divulgação do Curso de Ciências Farmacêuticas da Universidade do Porto
Exhibition
 13ª Mostra da Universidade do Porto.
Universidade do Porto, Portugal
2015 - 2015 6th Congress of European Microbiologists
Congress
 6th Congress of European Microbiologists
Federation of European Microbiological Societies, Portugal
2015 - 2015 CONGRESS OF MICROBIOLOGY AND BIOTECHNOLOGY 2015
Congress
2014/03 - 2014/03 14ª Mostra da Universidade do Porto. Participação na divulgação do Curso de Ciências Farmacêuticas da Universidade do Porto
Exhibition
 14ª Mostra da Universidade do Porto.
Universidade do Porto, Portugal
2014 - 2014 Public Health and Epidemiology I (Session Moderator)
Meeting
 7º Encontro Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2014 - 2014 Poster Discussion (Guest juri)
Meeting
 7º Encontro Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2014 - 2014 Public Health and Epidemiology II (Session Moderator)
Meeting
 7º Encontro Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2014 - 2014 Carbapenemases em bacilos de Gram negativo: deteção e implicações clínicas
Workshop
 Carbapenemases em bacilos de Gram negativo: deteção e implicações clínicas
Faculdade de Farmácia. Universidade do Porto., Portugal
2014 - 2014 7ª Reunião Anual PortFIR
Meeting
 7ª Reunião Anual PortFIR
Instituto Nacional de Saúde, Portugal
2014 - 2014 24th European Congress Clinical Microbiology and Infectious Diseases
Congress
2013/03 - 2013/03 11ª Mostra da Universidade do Porto. Participação na divulgação do Curso de Ciências Farmacêuticas da Universidade do Porto
Exhibition
 11ª Mostra da Universidade do Porto.
Universidade do Porto, Portugal
2013 - 2013 Public Health and Epidemiology I (Session Moderator)
Meeting
 6º Encontro Investigação Jovem da Universidade do Porto
Universidade do Porto, Portugal
2013 - 2013 Public Health and Epidemiology II (Session Moderator)
Meeting
 6º Encontro Investigação Jovem da Universidade do Porto
2013 - 2013 Posters discussion (Guest juri)
Meeting
 6º Encontro Investigação Jovem da Universidade do Porto
2013 - 2013 23rd European Congress Clinical Microbiology and Infectious Diseases
Congress
European Society of Clinical Microbiology and Infectious Diseases, Germany
2013 - 2013 Utilização da plataforma Moodle para a realização de exames online
Other
Universidade do Porto, Portugal
2012 - 2012 Public Health and Epidemiology (Session Moderator)
Meeting
 IJUP'12. 5º Encontro da Investigação Jovem da U. Porto
Universidade do Porto, Portugal
2012 - 2012 Poster discussion (Guest juri)
Meeting
 IJUP'12. 5º Encontro da Investigação Jovem da U. Porto
Universidade do Porto, Portugal
2012 - 2012 22nd European Congress Clinical Microbiology and Infectious Diseases
Congress
ESCMID, United Kingdom
2012 - 2012 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment
Congress
 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment
American Society of Microbiology, France
2012 - 2012 5ª Reunião Anual Portfir
Other
 5ª Reunião Anual Portfir
Instituto Nacional de Saúde Doutor Ricardo Jorge IP, Portugal
2011 - 2011 Resistências aos antibióticos em Bactérias Gram positivo (MRSA, VRSA, VRE)
Congress
 20º ENCONTRO CIENTÍFICO APAC. "Acrescentar valor ao laboratório clínico".
Associação Portuguesa de Analistas Clínicos, Portugal
2011 - 2011 21st European Congress Clinical Microbiology and Infectious Diseases/ 7th International Congress Chemotherapy
Congress
2011 - 2011 4th Congress of European Microbiologists, FEMS 2011
Congress
2011 - 2011 Evento de Microbiologia- Siemens
Meeting
2010 - 2010 Clones, genes e elementos genéticos móveis: peças do puzzle da resistência a antibóticos
Symposium
 Clones, genes e elementos genéticos móveis: peças do puzzle da resistência a antibóticos
Faculdade de Farmácia da Universidade do Porto, Portugal
2010 - 2010 20th European Congress Clinical Microbiology and Infectious Diseases
Congress
ESCMID, Austria
2010 - 2010 Too much on your plate? A practical guide to investigating and controlling outbreaks of food-borne infection in hospitals
Workshop
 Educational Workshops 2010- 20th ECCMID
ESCMID Food- and Water-borne Infections Study Group, Austria
2010 - 2010 V Congresso Científico da AEFFUP-Antibióticos, uma abordagem complementar
Congress
 V Congresso Científico da AEFFUP-Antibióticos, uma abordagem complementar
Associação de estudantes da Faculdade de Farmácia do Porto, Portugal
2010 - 2010 II Painel-Resistências a Antibióticos-nível Hospitalar, Comunidade e Meio Ambiente, parte I (Moderador)
Congress
 V Congresso Científico AEFFUP. Antibioterapia-Uma Abordagem Complementar
Associação de Estudantes da Faculdade de Farmácia da Universidade do Porto, Portugal
2010 - 2010 Seminários em Microbiologia Clínica, II Edição
Seminar
 Seminários em Microbiologia Clínica, II Edição
Universidade Fernando Pessoa, Portugal
2009 - 2009 19th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2009 - 2009 1ªs Jornadas Cientificas de Farmácia Comunitária. Grupo Profissional de Farmácia de Oficina da Ordem dos Farmaceuticos
Conference
 1ªs Jornadas Cientificas de Farmácia Comunitária. Grupo Profissional de Farmácia de Oficina da Ordem dos Farmaceuticos
Ordem dos Farmaceuticos, Portugal
2009 - 2009 Resistência à Antibioterapia-Fungos e Bactérias
Seminar
 Resistência à Antibioterapia-Fungos e Bactérias
Universidade da Beira Interior, Portugal
2008 - 2008 18th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2008 - 2008 Molecular methods to study complex microbial communities. International Course
Other
 Molecular methods to study complex microbial communities. International Course
CESAM & Department of Biology, Portugal
2008 - 2008 Workshop in Bacterial identification, typing and detection
Workshop
 Workshop in Bacterial identification, typing and detection
Universidade do Porto Instituto de Biologia Molecular e Celular, Portugal
2008 - 2008 Uretrites e cervicites gonocócicas
Workshop
 I Workshop de Doenças Sexualmente transmíssiveis
Universidade Fernando Pessoa, Portugal
2008 - 2008 Workshop sobre Doenças Sexualmente Transmissíveis,
Workshop
Universidade Fernando Pessoa, Portugal
2008 - 2008 Seminários em Microbiologia Clínica, I Edição
Seminar
 Seminários em Microbiologia Clínica, I Edição
Universidade Fernando Pessoa, Portugal
2007 - 2007 17th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2007 - 2007 Workshop:Expressão Genética e Detecção Microrganismos por PCR em Tempo Real
Workshop
 Workshop:Expressão Genética e Detecção Microrganismos por PCR em Tempo Real
2007 - 2007 A Importância do antibiograma
Symposium
 Jornadas da Saúde
Universidade Fernando Pessoa, Portugal
2007 - 2007 1º Seminário sobre Doenças Sexualmente Transmissíveis
Seminar
Universidade Fernando Pessoa, Portugal
2006 - 2006 16th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2006 - 2006 2nd FEMS Congress of European Microbiologists
Congress
 2nd FEMS Congress of European Microbiologists
2005 - 2005 15th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2005 - 2005 PFGE, MLST, RAPD, MLVA, AFLP, PCR-RFLP & Co: choosing the right methods to type bacteria –and interpreting its results
Workshop
 PFGE, MLST, RAPD, MLVA, AFLP, PCR-RFLP & Co: choosing the right methods to type bacteria –and interpreting its results
ESCMID study group on epidemiological markers /ESGEM), Denmark
2005 - 2005 Congresso Nacional de Microbiologia e Bioquímica 05
Congress
 Congresso Nacional de Microbiologia e Bioquímica 05
Sociedade Portuguesa de Microbiologia e Sociedade Portuguesa de Bioquímica, Portugal
2004 - 2004 14th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2004 - 2004 44th Interscience Conference of Antimicrobial Agents Chemotherapy
Congress
 44th Interscience Conference of Antimicrobial Agents Chemotherapy
2003 - 2003 13th European Congress of Clinical Microbiology and Infectious Diseases
Congress
2003 - 2003 Novas perspectivas em Microbiologia Clínica (Parte II)
Other
 Novas perspectivas em Microbiologia Clínica (Parte II)
Ordem dos Farmaceuticos, Portugal
2003 - 2003 Congresso Nacional de Microbiologia
Congress
 Congresso Nacional de Microbiologia 2003
Sociedade Portuguesa de Microbiologia, Portugal
2002 - 2002 Novas perspectivas em Microbiologia Clínica (Parte I)
Other
 Novas perspectivas em Microbiologia Clínica (Parte I)
Ordem dos Farmaceuticos, Portugal
2002 - 2002 4th European Congress of Chemotherapy and Infection
Congress
 4th European Congress of Chemotherapy and Infection
2001 - 2001 Programa de pós-graduação em ciências da vida e da saúde. Molecular Biology of Bacterial Pathogenesis
Other
 Programa de pós-graduação em ciências da vida e da saúde. Molecular Biology of Bacterial Pathogenesis
Escola de Ciências de Saúde. Universidade do Minho, Portugal
2001 - 2001 Acção de formação sobre tuberculose
Workshop
 Acção de formação sobre a tuberculose
Associação de estudantes da Faculdade de Farmácia da Universiadade do Porto, Portugal
2001 - 2001 Microbiologia- o futuro é já hoje
Conference
 Microbiologia- o futuro é já hoje
Associação de estudantes da Faculdade de Farmácia do Porto, Portugal
2000 - 2000 XIII Curso de Avances en Antibioterapia
Seminar
 XIII Curso de Avances en Antibioterapia
Hospital Universitário de la Princesa., Spain
2000 - 2000 Food safety
Conference
 Food safety
1999 - 1999 Congresso Nacional de Microbiologia 99
Congress
 Congresso Nacional de Microbiologia 99
Sociedade Portuguesa de Microbiologia, Portugal
1998 - 1998 Infecções Humanas e seu tratamento.
Conference
 Infecções Humanas e seu tratamento.
Associação de estudantes da Faculdade de Farmácia do Porto, Portugal
1996 - 1996 Infecções parasitárias - perspectivas de diagnóstico e tratamento
Conference
 Infecções parasitárias - perspectivas de diagnóstico e tratamento
Associação de estudantes da Faculdade de Farmácia do Porto, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2023/09/14 Unraveling the contribution of environmental stressors to the selection of multidrug-resistant bacteria: focus on the poultry production chain
Supervisor
 Andreia Rebelo (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2022/01 Comprehensive urogenital microbiome profiling: towards better understanding of female urinary tract in health and disease
Thesis Member
 Magdalena Dorota Ksiezarek (PhD)
Associação de estudantes da Faculdade de Farmácia do Porto, Portugal
2021/07/08 Caracterização de Enterococcus spp. provenientes de pacientes hospitalizados antes e em diferentes fases da pandemia COVID-19
Supervisor
 Maria Manuel Moura Cabral (Other)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2020/09/14 Estrutura populacional e cenário evolutivo do patógeno multirresistente Enterococcus faecium em instituições hospitalares no Rio de Janeiro.
(Thesis) Main arguer
 Stephanie da Silva Rodrigues de Souza (PhD)
Centro Biomédico. Faculdade de Ciências Médicas. Universidade do Estado do Rio de Janeiro, Brazil
2020/07/31 Occurrence of copper tolerant and antibiotic resistant Enterococcus faecium in poultry farms using feed supplemented with inorganic or organic copper forms (Curricular Unit Project I).
Supervisor
 Carina da Cunha Baptista (Other)
Universidade do Porto Faculdade de Farmácia, Portugal
2020/02 Multidrug-resistant high-risk Enterococcus faecium clones: can we really define them? (PhD Seminar)
Supervisor
 Ana Paula Pereira (Other)
Faculdade de Farmácia da Universidade do Porto, Portugal
2019/07 Resistência à ampicilina em Enterococcus faecium obtidos de carcaças de frangos. (Experimental research associated with Project I Curricular Unit).
Supervisor
 Carolina Ferrreira (Other)
Universidade do Porto Faculdade de Farmácia, Portugal
2018 Caracterização de isolados de Escherichia coli e Klebsiella pneumoniae resistentes os antibióticos provenientes de um hospital do Norte do País.
(Thesis) Main arguer
 Diana Coelho Marques (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2018 Bactérias de Gram negativo resistentes aos antibióticos como colonizadoras de utentes de unidades de cuidados continuados integrados
(Thesis) Main arguer
 Rita Sofia Conde Lopes (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2018 Avaliação da qualidade Microbiológica de alface higienizada por dois métodos e sujeira a diferentes tempos e temperaturas de armazenamento em unidades de alimentação e nutrição
(Thesis) Main arguer
 Maria João Marinho Dias Cardoso (Master)
Faculdade de Ciências da Nutrição e Alimentação da Universidade do Porto, Portugal
2018 Tracking Salmonella Population Dynamics and Antimicrobial Resistance: local insights with a global impact
Thesis Member
 Joana Araújo Alves de Campos (PhD)
Faculdade de Farmácia. Universidade do Porto, Portugal
2017 Avaliação da colonização intestinal de crianças por bactérias Gram negativas resistentes aos antibióticos
(Thesis) Main arguer
 Carolina Santos Crus (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2017 Colonização intestinal por bacilos de Gram negativo resistentes aos antibióticos em residentes de unidades de cuidados continuados, ERPI/lares den idosos e centros de dia.
(Thesis) Main arguer
 Gracinda Coutinho Feio Duarte (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2017 O que estamos a perder quando os valores de cut-off epidemiológico (ECOFF) não são usados para avaliar os fenótipos de susceptibilidade à ampicilina em Enterococcus faecium?
Supervisor
 Ana Paula Fernandes Pereira (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016/07 O que estamos a perder quando os valores de cut-off (ECOFF) não são usados para avaliar os fenótipos de susceptibilidade à ampicilina em Enterococcus faecium? (Experimental research associated with Project I Curricular Unit).)
Supervisor
 Ana Paula Pereira (Other)
Universidade do Porto Faculdade de Farmácia, Portugal
2016 Extending the knowledge on drivers of intrinsic and acquired resistance to cephalosporins and quinolones in Enterobacteriaceae
Thesis Member
 Teresa Gonçalves Ribeiro (PhD)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 Temporal shifts of clinical vancomycin-resistant Enterococcus faecium
Supervisor
 Sara Aguiar (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2016 Estudo dos fatores que promovem a transferência horizontal da resistência à ampicilina em Enterococcus faecium: optimização de um protocolo.
Supervisor
 Flávia Mendes (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2015 Pesquisa de Enterococcus faecium resistentes à ampicilina ou vancomicina provenientes de diversos nichos ecológicos de Angola
Supervisor
 Ana Rita Dias (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2015 Pseudomonas aeruginosa resistentes aos carbapenemos em isolados clínicos de um hospital da região Norte de Portugal
(Thesis) Main arguer
 Ana Margarida Ferreira Machado (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2015 Bacilos de Gram negativo resistentes aso antibióticos como colonizadores intestinais de residentes de uma Unidade de Cuidados Continuados
(Thesis) Main arguer
 Patrícia Raquel Tavares Santos (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2015 Avaliação dos perfis de resistência a antibióticos em Escherichia coli provenientes de infeções urinárias adquiridas na comunidade
(Thesis) Main arguer
 Bibiana Maria Lima Marques (Master)
Universidade Fernando Pessoa, Portugal
2014 Extended Virulence Profile of Enterococcus faecium from Swine (Europe/USA, 1998-2008)
Supervisor
 Elsa Martins (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2014 Tolerância a biocidas e dispersão da resistência a antibióticos: uma abordagem fenotípica e molecular em Enterococcus spp de diferentes origens
Supervisor
 Maria Eduarda Moreno da Silveira (PhD)
Faculdade de Farmácia. Universidade do Porto, Portugal
2014 Caracterização molecular de isolados clínicos de Pseudomonas aeruginosa resistentes aos carbapenemos
(Thesis) Main arguer
 Catarina Rocha (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2014 Resistência a antibióticos de último recurso em ambientes naturais
(Thesis) Main arguer
 Marta Cristina Oliveira Martins Tacão (PhD)
Universidade de Aveiro, Portugal
2014 Exame de Estágio em Ciências Farmacêuticas
President of the jury
 Ana Sofia Pinto Barbosa (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 Search of Quaternary Ammonium Compounds tolerance genes among Enterococcus spp. and their relation with Antibiotic Resistance
Supervisor
 Patrice Gomes Marques (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 Deteção de Enterobacteriaceae produtoras de ESBL na flora fecal de bovinos
(Thesis) Main arguer
 Tiago Emanuel Carvalho Silva (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 Deteção e caraterização de bactérias coliformes produtoras de beta-lactamases de espetro alargado em areias de zonas balneares fluviais do rio Douro.
(Thesis) Main arguer
 Susana Rocha (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 Os antibióticos e as bactérias multi-resistentes
(Thesis) Main arguer
 Cátia Alexandrina Pereira Araújo (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2013 Avaliação do prazo de validade dos alimentos-Conceitos e metodologias
Supervisor
 Vânia Patrícia Alves Pereira (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 Vigilância e caracterização molecular de Enterobacteriaceae resistentes a antibióticos beta-lactâmicos em diferentes nichos em Portugal
President of the jury
 Carla Alexandra Parada Rodrigues (Other)
Universidade Fernando Pessoa, Portugal
2012 Avaliação dos perfis de resistência de Escherichia coli em infecções urinárias adquiridas na comunidade
President of the jury
 Bibiana Maria Lima Marques (Other)
Universidade Fernando Pessoa, Portugal
2012 Disseminação horizontal de elementos de inserção cromossomal associados à resistência à ampicilina em Enterococcus faecium oriundos de diferentes nichos ecológicos.
Supervisor
 Ricardo Jorge Escada (Master)
Universidade Fernando Pessoa, Portugal
2012 Rastreio de Mycobacterium avium subsp. paratuberculosis da Doença de Crohn
(Thesis) Main arguer
 António Pedro Alegre Martinho (Master)
Universidade Fernando Pessoa, Portugal
2012 Pesquisa de genes de resistência ao mercúrio em bactérias de Gram positivo.
(Thesis) Main arguer
 Helena Martins Pinto (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 Estudo da transferência horizontal de genes de resistência a antibióticos e ao cobre em isolados de Salmonella de Portugal
(Thesis) Main arguer
 Tatiana Sá Alves (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 Pesquisa de Enterococcus spp resistentes a antibióticos com interesse clínico de truticulturas do Norte de Portugal
Supervisor
 Joana Fonte (Master)
Universidade Fernando Pessoa, Portugal
2012 Probióticos: uma terapêutica viva em evolução
(Thesis) Main arguer
 Sylvie Gomes Certal (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 Probióticos: uso da saúde humana e papel na diarreia
(Thesis) Main arguer
 Maria João Couto Oliveira Machado (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2012 Doenças alimentares de origem bacteriana
Supervisor
 Ana Regina de Freitas Alves (Master)
Universidade Fernando Pessoa, Portugal
2012 Multi-level analysis of carbapenem-resistant Acinetobacter spp: towards an understanding on population dynamics
(Thesis) Main arguer
 Filipa Maria Fortio Mourato Teixeira Grosso (PhD)
REQUIMTE. Lab. de Microbiologia. Faculdade de Farmácia. Universidade Porto, Portugal
2011 O Contributo do Farmacêutico na Pandemia da Gripe
President of the jury
 António Carlos Ferreira Monteiro Saraiva (Other)
Universidade Fernando Pessoa, Portugal
2011 Estado da arte sobre a interacção de microrganismos com o sistema do plasminogénio.
(Thesis) Main arguer
 Xavier Américo Soares Ribeiro (Master)
Universidade Fernando Pessoa, Portugal
2011 Caracterização de Enterococcus spp. resistentes isolados de águas não tratadas destinadas ao consumo humano
President of the jury
 Ana Sofia Gonçalves Teixeira Macedo (Other)
Universidade Fernando Pessoa, Portugal
2011 Avaliação da actividade antifúngica de derivados do imidazol e da purina
(Thesis) Main arguer
 João Miguel Pinto Camarinha (Other)
Universidade Fernando Pessoa, Portugal
2011 Detecção e caracterização molecular de beta-lactamases de espectro alargado em Enterobacteriaceae provenientes de suiniculturas Portuguesas
(Thesis) Main arguer
 Vanessa Cristina Araújo Silva (Other)
Universidade Fernando Pessoa, Portugal
2011 Resistência adquirida a quinolonas em Enterobacteriaceae isoladas de suiniculturas Portuguesas
President of the jury
 Ana Raquel Pinto Monteiro (Other)
Universidade Fernando Pessoa, Portugal
2011 Caracterização molecular de agentes infecciosos associados ao desenvolvimento do cancro do colo do útero em jovens no Norte de Portugal: Estudo do papilomavírus Humano e Chlamydia trachomatis
President of the jury
 Jani Viviana Alves Vital da Silva (Master)
Universidade Fernando Pessoa, Portugal
2011 Molecular characterization of vancomycin-resistant Enterococcus spp. from animals: are they identical to isolates from humans?
(Thesis) Main arguer
 Ana Isabel Machado da Cunha (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2011 Caracterizaçao fenotípica e molecular de isolados de Salmonella entererica do serótipo 4,(5),12:1- de Portugal
(Thesis) Main arguer
 Joana Vanessa Cordeiro Melro Mourão (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2011 Doença dos Legionário: Uma revisão crítica
President of the jury
 João Pedro Rodrigues de Sousa Quirino (Other)
Universidade Fernando Pessoa, Portugal
2011 Epidemiologia de b-lactamases adquiridas do tipo AmpC em isolados clínicos humanos de Enterobacteriaceae
President of the jury
 Francisco José Oliveira Freitas (Master)
Universidade Fernando Pessoa, Portugal
2011 Pesquisa de genes que conferem resistência aos Compostos de Amónio Quaternário em Enterococcus spp oriundos de diferentes nichos ecológicos
Supervisor
 Natalina Maria Rodrigues (Master)
Universidade Fernando Pessoa, Portugal
2010 Pesquisa de genes de resistência a inibidores da síntese proteica em Enterococcus spp de origem animal
Supervisor
 Ana Cristina Martins Nogueira (Other)
Universidade Fernando Pessoa, Portugal
2010 Azóis:Farmacologia e interacções medicamentosas
President of the jury
 Maria Inês Carrilho Gonçalves Moreira (Other)
Universidade Fernando Pessoa, Portugal
2010 Caracterização de genes que codificam para beta-lactamases de espectro alargado em Enterobacteriaceae de origem hospitalar
(Thesis) Main arguer
 Teresa Gonçalves (Other)
Universidade Fernando Pessoa, Portugal
2010 Selecção de desinfectantes e qualidade microbiológica de ambientes controlados
(Thesis) Arguer
 Glória Cristina Abreu Rodrigues Soares (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2010 Associação da resistência a metais e antibióticos em Enterococcus spp de origem animal
Supervisor
 Francisca Gomes Silva Seco (Master)
Universidade Fernando Pessoa, Portugal
2010 Qualidade microbiológica do ar de clínicas dentárias
(Thesis) Main arguer
 Lucília Isabel Lima Pontes (Other)
Universidade Fernando Pessoa, Portugal
2010 Epidemiologia de b-lactamases AmpC adquiridas em isolados clínicos humanos de Enterobacteriaceae
(Thesis) Main arguer
 Francisco José Oliveira Freitas (Other)
Universidade Fernando Pessoa, Portugal
2009 Disseminação ambiental de bactérias e genes que conferem resistência a antibióticos e o seu possível impacto na saúde pública
Supervisor
 Eduarda Silveira (Other)
Universidade Fernando Pessoa, Portugal
2009 Avaliação da disseminação horizontal de pbp5 em isolados de Enterococcus spp resistentes a beta-lactâmicos de origem humana, animal e ambiental
Supervisor
 Vânia Catarina Cruz de Sá (Other)
Universidade Fernando Pessoa, Portugal
2009 Estudo da susceptibilidade a antibióticos em Enterococcus spp oriundos do ambiente de suiniculturas Portuguesas
Supervisor
 Ana Isabel Gonçalves Silva Ferraz Dias (Other)
Universidade Fernando Pessoa, Portugal
2009 Disseminação horizontal de genes que conferem resistência à tetraciclina em isolados de Enterococcus spp de origem humana e animal
Supervisor
 Lara Filipa Sampaio Moreira (Other)
Universidade Fernando Pessoa, Portugal
2009 Actividade antifungica de óleos essenciais no crescimento de Aspergillus spp.
(Thesis) Main arguer
 Patrícia Alexandra Albino Figueiredo (Other)
Universidade Fernando Pessoa, Portugal
2009 Staphylococcus aureus meticilina resistentes: A comunidade e o Hospital
Supervisor
 Dina Maria Afonso da Rocha (Other)
Universidade Fernando Pessoa, Portugal
2008 Pesquisa e caracterização da actividade antibacteriana associada à lesma terrestre Arion ater
(Thesis) Main arguer
 Fabiana Raquel Branquinho (Master)
Faculdade de Farmácia. Universidade do Porto, Portugal
2008 Sífilis e suas implicações
(Thesis) Main arguer
 Sofia Adelaide Pereira Leite de Sousa Pimentel (Other)
Universidade Fernando Pessoa, Portugal
2008 Prescrição de Antibióticos: um acto de Consciência
(Thesis) Main arguer
 Elsa Daniela Pinheiro Costa (Other)
Universidade Fernando Pessoa, Portugal
2008 Distribuição das infecções provocadas pelo género Candida no serviço de Microbiologia do Hospital Geral de Santo António
(Thesis) Main arguer
 Ana Filipa Leite Duarte (Other)
Universidade Fernando Pessoa, Portugal
2008 Avaliação do Crescimento de Mycobacterium avium subsp. paratuberculosis
(Thesis) Main arguer
 Andreia Cristina Duarte Soares (Other)
Universidade Fernando Pessoa, Portugal
2007 Atitudes dos adolescentes face às doenças sexualmente transmissíveis
(Thesis) Main arguer
 Ana Teresa Martins Esteves (Other)
Universidade Fernando Pessoa, Portugal
2007 Leishmaniose visceral-Avaliação do conhecimento da população de Bragança
(Thesis) Main arguer
 Mónica Cristina da Silva Gonçlaves (Other)
Universidade Fernando Pessoa, Portugal
2007 Diagnóstico laboratorial da infecção por Helicobacter pylori
(Thesis) Main arguer
 Liliana Isabel Duarte Soares Ferreira (Other)
Universidade Fernando Pessoa, Portugal
2007 Péptidos com actividade antimicrobiana produzidos por Bacillus spp
(Thesis) Main arguer
 Fabiana Raquel Branquinho (Other)
Faculdade de Farmácia. Universidade do Porto, Portugal
2006 Otomicoses
(Thesis) Main arguer
 Sara Isabel Moreira Neves (Other)
Universidade Fernando Pessoa, Portugal
2006 Leishmaniose visceral
(Thesis) Main arguer
 Diana Teresa Certal Esteves (Other)
Universidade Fernando Pessoa, Portugal
2006 Prevenção da toxoplasmose congénita: vigilância serológica na grávida
(Thesis) Main arguer
 Andreia Sofia Soares Castro (Other)
Universidade Fernando Pessoa, Portugal

Association member

Society Organization name Role
2023 - Current ESCMID Study Group for Veterinary Microbiology (ESGVM)
2022/03 - Current American Society of Microbiology Member
2021/11 - Current Sociedade Portuguesa de Microbiologia
2013/07 - Current ESCMID Food- and Water-borne Infections Study Group – EFWISG
2011 - Current PortFir-Plataforma Portuguesa de Informação Alimentar (Coordenação: Instituto Nacional de Saúdeem parceria com a GS1 Portugal) Member
2005/01 - Current European Society of Microbiology and Infectious Diseases
2022/03/31 - 2022/12/31 American Society of Microbiology
2019/09 - 2019/12 American Society of Microbiology
2017/01 - 2017/12 American Society of Microbiology
2004/01 - 2012/12 American Society of Microbiology
2001 - 2011 Order of Pharmacists

Committee member

Activity description
Role 		Institution / Organization
2023 - Current Co-coordinator of the Human Resources Working Group within UCIBIO (Applied Molecular Biosciences Unit).
Coordinator
2022 - Current Member of the Coordinating Committee of the UCIBIO Research Unit (Applied Molecular Biosciences Unit).
Member
2020/08 - Current Representative of Faculty of Pharmacy-Porto University as effective member of the Technical Committee for Standardization on Food Microbiology (Portuguese Institute of Quality)
Other
2015 - Current Member of the Scientific Council of the UCIBIO Research Unit (Applied Molecular Biosciences Unit).
Member
2023/03 - 2023/09 Member of the Executive Committee in Porto within UCIBIO (Applied Molecular Biosciences Unit).
Member
2010 - 2018 Portuguese Network on Microbiological Information in Food (RIPMA) -Work Group on Microbiological Occurrence in the Food Chain (GTOMCA).
Member
2010 - 2018 Portuguese Network on Microbiological Information in Food (RIPMA) - Working Group on Food Toxinfections (GTTA)
Member
2008 - 2017 Novais, Carla; Sousa, João C; Cerqueira, Fátima. Creation of a study cycle - Master in Clinical Microbiology. Fernando Pessoa University, 2008. Master's approved by Order No. 2227/2008 of 23 January.
Member
 Universidade Fernando Pessoa Faculdade de Ciências da Saúde, Portugal
2008/09 - 2012/08 Member of the Pedagogical Coordination of the I and II edition of the Master in Clinical Microbiology
Member
 Universidade Fernando Pessoa, Portugal
2006 - 2012 Member of the Pedagogical Coordination of 1st, 2nd, 3rd Edition of the Antibiotherapy Course
Member
2007/09 - 2008/12 Member of the Pedagogical Coordination of the 2nd and 3rd Edition of the Postgraduate Program in Clinical Microbiology
Member
 Universidade Fernando Pessoa, Portugal

Conference scientific committee

Conference name Conference host
2022/10/27 - 2022/10/27 Dia do Laboratório de Microbiologia 2022 Faculdade de Farmácia. Universidade do Porto
2019/11/15 - 2019/11/15 Dia do Laboratório de Microbiologia 2019
2008 - 2008 Workshop sobre Doenças Sexualmente Transmissíveis Universidade Fernando Pessoa
2007 - 2007 1º Seminário Sobre Doenças Sexualmente Transmissíveis Universidade Fernando Pessoa

Consulting

Activity description Institution / Organization
2017 - 2017 External Evaluator of PhD thesis. Student: Ricardo León Sampedro. Thesis title: Enterococcus faecalis: new insights about population structure and the evolutionary impact of mobile genetic elements. Universidad Complutense de Madrid . Universidad Complutense de Madrid, Spain
2016 - 2016 External evaluator of PhD thesis Student: Mariana Camoez Thesis title:Methicillin-resistant Staphylococcus aureus: evolution of endemic clones and emergence of community clones in the hospital environment PhD Program:Programa de Doctorat en Biomedicina Linea: Metabolisme, Senyalitzacio Metabolica i Patologies Associades. Barcelone University, Spain

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2019/04 - Current Clinical Bacteriology (Theoretical and Laboratory classes) Clinical analysis Master (Mestrado) Faculdade de Farmácia. Universidade do Porto, Portugal
2016/09 - Current General Microbiology (lab classes) Integrated Master in Pharmaceutical Sciences (Mestrado integrado) Faculdade de Farmácia. Universidade do Porto, Portugal
2012/09 - Current Bacteriology (LAB classes) Integrated Master in Pharmaceutical Sciences (Mestrado integrado) Faculdade de Farmácia. Universidade do Porto, Portugal
2012/09 - Current Microbiological Quality (Theoretical and laboratory classes) Master in Quality Control (Mestrado) Faculdade de Farmácia. Universidade do Porto, Portugal
2012/09 - Current Food Microbiology (Theoretical and laboratory classes) Integrated Master in Pharmaceutical Sciences (Mestrado integrado) Faculdade de Farmácia. Universidade do Porto, Portugal
2022/04/21 - 2022/04/21 Curso de Antimicrobianos- Módulo I. Tópico: Antibióticos para bactérias de Gram positivo. Associação Portuguesa de Farmacêuticos Hospitalares, Portugal
2021/12/02 - 2021/12/09 Laboratory preparation sessions for application of the MicroMundo@U.Porto project in schools (2nd edition) Faculdade de Farmácia. Universidade do Porto, Portugal
2020/11/23 - 2020/11/23 "Qualidade, higiene e segurança alimentar." para alunos do 12.º ano do Curso Profissional de Técnico Auxiliar de Saúde. Escola Secundária Miguel Torga, Monte Abraão. Queluz. (Ensino secundário) Escola Secundária Miguel Torga, Portugal
2019/12 - 2019/12 Laboratory preparation sessions for application of the MicroMundo@U.Porto project in schools (2nd edition) (Outros) Faculdade de Farmácia da Universidade do Porto, Portugal
2018/02 - 2018/02 Uso correto de antibióticos e prevenção da disseminação de doenças infecciosas. Training session for students of the Faculty of Pharmacy of the University of Porto belonging to Cura + Association (Outros) Faculdade de Farmácia da Universidade do Porto, Portugal
2018 - 2018 Laboratory preparation sessions for application of the MicroMundo@U.Porto project in schools (1st edition) Outra (Outros) Faculdade de Farmácia da Universidade do Porto, Portugal
2013/01 - 2017/05 Imunology (lab classes) Integrated Master in Pharmaceutical Sciences (Outros) Faculdade de Farmácia. Universidade do Porto, Portugal
2015/06 - 2015/06 Demonstration of Microbiological analysis of water and scientific research activities for students of the Laboratory Technicians course at Escola Secundária Infante D. Henrique- Porto (Outros) Faculdade de Farmácia da Universidade do Porto, Portugal
2013/04 - 2013/04 Demonstration of Microbiological analysis of water and scientific research activities for students of the Laboratory Technicians course at Escola Secundária Infante D. Henrique- Porto (Ensino secundário) Faculdade de Farmácia da Universidade do Porto, Portugal
2009/09 - 2012/07 General Microbiology (lab classes) Nursing (Licenciatura) Universidade Fernando Pessoa, Portugal
2009/09 - 2012/07 General Microbiology (lab classes) Dental Medicine (Mestrado integrado) Universidade Fernando Pessoa, Portugal
2008/09 - 2012/07 Clinical Bacteriology (theoretical classes) Clinical Microbiology Master (Mestrado) Universidade Fernando Pessoa, Portugal
2008/09 - 2012/07 General Microbiology (lab classes) Pharmaceutical Sciences Integrated Master (Mestrado integrado) Universidade Fernando Pessoa, Portugal
2003/09 - 2012/07 Bacteriology (Theoretical and Laboratory classes) Integrated Master in Pharmaceutical Sciences (Mestrado integrado) Universidade Fernando Pessoa, Portugal
2010/06 - 2010/07 Summer Scientific Internships integrated in the Science and Technology Week Program (Ciência Viva) 2010: Discovery of compounds with antimicrobial activity. Ciência Viva (Ensino secundário) Universidade Fernando Pessoa Faculdade de Ciências da Saúde, Portugal
2009/07 - 2009/07 Scientific Summer Internships integrated in the Science and Technology Week Program (Ciência Viva) 2009: Discovery of compounds with antimicrobial activity. Ciência Viva (Ensino secundário) Universidade Fernando Pessoa Faculdade de Ciências da Saúde, Portugal
2009 - 2009 IV Edition of Antimicrobials Course - Antibiotics Module Antibiotic Course (Curso médio) Universidade Fernando Pessoa Faculdade de Ciências da Saúde, Portugal
2008/09 - 2008/12 General Microbiology (theoretical and laboratory classes). Nursing (Licenciatura) Universidade Fernando Pessoa, Portugal
2006/05 - 2008/10 Clinical Bacteriology (Theoretical Classes) Post-Graduation in Clinical Microbiology (Especialização pós-licenciatura) Universidade Fernando Pessoa, Portugal
2006/05 - 2008/10 Microbiological Diagnosis I (Theoretical and Laboratory classes) Post-Graduation in Clinical Microbiology (Mestrado) Universidade Fernando Pessoa, Portugal
2008/07 - 2008/07 Scientific Summer Internships integrated in the Science and Technology Week Program (Ciência Viva) 2008: Discovery of compounds with antimicrobial activity. Ciência Viva (Ensino secundário) Universidade Fernando Pessoa Faculdade de Ciências da Saúde, Portugal
2008 - 2008 III Edition of Antimicrobials Course - Antibotics Module Antibiotic Course (Outros)
2007/07 - 2007/07 Scientific Summer Internships integrated in the Science and Technology Week Program (Ciência Viva) 2007: Discovery of compounds with antimicrobial activity. Ciência Viva (Ensino secundário) Universidade Fernando Pessoa Faculdade de Ciências da Saúde, Portugal
2007/01 - 2007/06 Bacteriology (theoretical and laboratory classes) Clinical Analysis and Public Health (Licenciatura) Universidade Fernando Pessoa, Portugal
2007 - 2007 II Edition of Antimicrobials Course - Antibiotics Module Antibiotic Course (Outros)
2006/01 - 2006/06 General Microbiology (LAB Classes) Clinical Analysis and Public Health (Licenciatura) Universidade Fernando Pessoa, Portugal
2006/01 - 2006/06 Mycology and Parasitology (LAB Classes) Clinical Analysis and Public Health (Licenciatura) Universidade Fernando Pessoa, Portugal
2002/01 - 2006/06 Clinical Microbiology and Epidemiology I (Theoretical Classes) Nursing (Licenciatura) Universidade Fernando Pessoa, Portugal
2006 - 2006 I Edition of Antimicrobials - Antibacterials Module Antibiotic Course Universidade Fernando Pessoa, Portugal
2001/11 - 2006 General Microbiology (Theoretical Classes) Nursing (Licenciatura) Universidade Fernando Pessoa, Portugal
2003/09 - 2004/01 Clinical Microbiology and Epidemiology II (Theoretical Classes) Nursing (Licenciatura) Universidade Fernando Pessoa, Portugal

Evaluation committee

Activity description
Role 		Institution / Organization Funding entity
2023/01 - Current Call for an Initial Research Fellowship (BIC) (Reference REQUIMTE 2023-02) on the project CLEANWATER: Combining ecological status and microbiota diversity to decipher bioindicators for emergent micropollutants in water supply systems with reference 2022.02124.PTDC, supported by national funds by FCT/MCTES, is available at REQUIMTE. Universidade do Porto, Portugal
President
 Research Unit on Applied Molecular Biosciences (UCIBIO/REQUIMTE), Portugal
2023 - Current Reviewer of scientific abstracts submitted to the 34th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) of the European Society of Clinical Microbiology and Infectious Diseases (ESCMID). Barcelona, Spain.
Evaluator
2022/11 - Current Conselho Científico do site "Cartoons de Microbiologia" da Sociedade Portuguesa de Microbiologia (https://cartoonmicrobiologia.com/conselho-cientifico-do-site/)
Member
 Sociedade Portuguesa de Microbiologia, Portugal
2020 - 2020 Pedagogical-Scientific Jornadas Madalena Pinto'20 within the Organic Chemistry I and Organic Pharmaceutical Chemistry II Curricular Units (Jury of the scientific-pedagogical works presented)
Evaluator
 Faculdade de Farmácia. Universidade do Porto, Portugal
2019/11/21 - 2019/11/21 Pedagogical-Scientific Jornadas Madalena Pinto'19 within the Organic Chemistry I and Organic Pharmaceutical Chemistry II Curricular Units (Jury of the scientific-pedagogical works presented)
Evaluator
 Faculdade de Farmácia da Universidade do Porto, Portugal
2019/11 - 2019/11 Call for a Postdoctoral Scholarship (Reference ICETA 2019-99), for the Applied Biomolecular Sciences Unit - UID / Multi / 04378/2019, financed by National Funds through FCT / MCTES and considering the UID Multiannual financing (2020-2023) from 01-01-2020, at the ICETA institution.
Evaluator
 UCIBIO_REQUIMTE. Faculdade de Farmácia. Universidade do Porto, Portugal
2018 - 2019 Call for a Researcher position, with the reference: REQUIMTE / EEC2018 / 35, within the scope of the tender procedure and international selection for hiring a doctorate (a) under article 23 of decree-law 57/2016 , of 29 August, amended by Law 57/2017 and Regulatory Decree No. 11-A / 2017 for the institution REQUIMTE.
Evaluator
 REQUIMTE, Portugal
2018 - 2019 Call for a Researcher position, with the reference: REQUIMTE / EEC2018 / 31, within the scope of the tender procedure and international selection for hiring a doctorate (a) under article 23 of decree-law 57/2016 , of 29 August, amended by Law 57/2017 and Regulatory Decree No. 11-A / 2017 for the institution REQUIMTE.
Evaluator
 REQUIMTE, Portugal
2018 - 2018 Call for the assignment of a Researcher position, with the reference: REQUIMTE / EEC2018 / 03, within the scope of the tender procedure and international selection for hiring a doctorate (a) under article 23 of decree-law 57/2016 , of 29 August, amended by Law 57/2017 and Regulatory Decree No. 11-A / 2017 for the REQUIMTE institution.
Evaluator
 REQUIMTE, Portugal
2017 - 2017 Evaluator of CESPU Grants applications
Evaluator
 Cooperativa de Ensino Superior Politécnico e Universitário, Portugal
2017 - 2017 Reviewer of scientific abstracts submitted to the ASM Microbe 2017 congress of the American Society for Microbiology. New Orleans, United States.
2017 - 2017 Call opened by Notice ICETA 2017-91 for the provision of a Post-Doctoral Scholarship with the reference ICETA 2017-01 within the scope of the SafeFood project (ID: ERA-IB-16-014) at the ICETA institution.
Evaluator
 REQUIMTE, Portugal
2016 - 2016 Call for a Master Research Grant (Reference REQUIMTE 2016-09) at the Associated Laboratory for Green Chemistry - Clean Technologies and Processes - UID / MULTI / 50006, with financial support from FCT / MEC through national and international funds. -funded by the European Regional Development Fund (ERDF), under the PT2020 Partnership Agreement for the REQUIMTE institution.
Evaluator
 REQUIMTE, Portugal
2016 - 2016 Call for Post Doctoral Scholarship Reference ICETA 2016-61 at the Applied Biomolecular Sciences Unit - MULTI / 04378, with financial support from FCT / MEC through national funds and when applicable co-financed by FEDER POCI-01-0145- FEDER-007728, under the PT2020 Partnership Agreement for the REQUIMTE institution.
Evaluator
 REQUIMTE, Portugal
2016 - 2016 Call for the award of a Postdoctoral Scholarship, within the scope of the project NORTE-01-0145-FEDER-000024, with the reference HEALTH_RL2_PHD_MICRO_01_2º for the institution REQUIMTE.
Evaluator
 REQUIMTE, Portugal
2016 - 2016 Call for a Post-Doctoral Fellowship, within the scope of the NORTE-01-0145-FEDER-000024 project, with the reference HEALTH_RL2_PHD_MICRO_01 for the institution REQUIMTE.
Evaluator
 REQUIMTE, Portugal
2016 - 2016 Call for a position of Researcher within the scope of the project with reference HEALTH_RL2_CI_MICRO_01, within the scope of the NORTE-01-0145-FEDER-000024 project for the REQUIMTE institution.
Evaluator
 REQUIMTE, Portugal
2015 - 2015 Jury for the GAI Research Projects Competition, 2015, Faculdade de Medicina. Universidade de Coimbra.
Evaluator
 Faculdade de Medicina. Universidade de Coimbra, Portugal
2014 - 2014 Jury for the GAI Research Projects Competition, 2014, Faculdade de Medicina. Universidade de Coimbra.
Evaluator
 Faculdade de Medicina. Universidade de Coimbra, Portugal
2013 - 2013 Concurso para a atribuição de 1 Bolsa de Pós-Doutoramento no âmbito do projecto Validação e optimização de métodos de alto rendimento para identificar e monitorizar clones de Escherichia coli para a instituição REQUIMTE.
Evaluator
 REQUIMTE, Portugal
2012 - 2012 Evaluator of projects submitted to Investigação Jovem da Universidade do Porto
Evaluator
2008 - 2008 Call for a Master Research Grant, Reference MICRO/BIM
Evaluator
 REQUIMTE, Portugal

Journal scientific committee

Journal title (ISSN) Publisher
2022/10/21 - Current Research in Veterinary Science Science Direct
2022/05 - Current Associate Editor of Frontiers in Microbiology (section Antimicrobials, Resistance and Chemotherapy)
2023 - 2023 Microbiology Spectrum ASM
2023 - 2023 Pathogens MDPI
2023 - 2023 Clinical Microbiology and Infection ESCMID
2023 - 2023 Reviews in Aquaculture Whiley Online Library
2023 - 2023 Microbiology and Molecular Biology Reviews
2022/07 - 2022/07 Microorganisms MDPI
2022/05 - 2022/06 Science of the Total Environment ScienceDirect
2022/03 - 2022/03 International Journal of Hygiene and Environmental Health Science Direct
2022/01/20 - 2022/01/30 Journal of Global Antimicrobial Resistance Elsevier
2022/01 - 2022/01 Journal of Global Antimicrobial Resistance Elsevier
2021/09 - 2021/10 Journal of Antimicrobial Chemotherapy Oxford Academic
2021/09 - 2021/09 Science of the Total Environment Elsevier
2021/06 - 2021/07 Journal of Bioremediation and Biodegradation
2021/02/01 - 2021/03/01 Applied and Environmental Microbiology American Society of Microbiology
2021/01 - 2021/01 Frontiers in Microbiology Frontiers Media SA
2020/11 - 2020/11 Applied and Environmental Microbiology American Society of Microbiology
2020/10 - 2020/10 Frontiers in Microbiology (1664-302X) Frontiers Media SA
2020/09 - 2020/09 Environmental Pollution (0269-7491) Elsevier
2020/05 - 2020/05 Applied and Environmental Microbiology (1098-5336) American Society for Microbiology
2020/02 - 2020/04 Frontiers in Microbiology (1664-302X) Frontiers Media SA
2018/09 - 2020/03 Pathogens [Guest Editor of the Special Issue "Transmission of Antibiotic Resistant Bacteria and Genes: Unveiling the Jigsaw Pieces of a One Health Problem"] (2076-0817) MDPI AG
2019/11 - 2020/01 Antimicrobial Resistance & Infection Control
2019/12/20 - 2019/12/29 The Science of The Total Environment (0048-9697) Elsevier
2019/06 - 2019/07 Frontiers in Microbiology (1664-302X) Frontiers Media SA
2019/04 - 2019/04 Frontiers in Microbiology (1664-302X) Frontiers Media SA
2019/01/18 - 2019/04 Frontiers in Microbiology
2019/01/24 - 2019/02 Journal of Antimicrobial Chemotherapy
2018/10/14 - 2018/11/06 Diagnostic Microbiology and Infectious Diseases
2018/09/24 - 2018/10/03 Environmental Pollution Elsevier
2018/07/06 - 2018/08 Frontiers in Miicrobiology
2018/06/21 - 2018/07 Plos One
2018/04/02 - 2018/05/02 Clinical Microbiology and Infection
2018/04/23 - 2018/05 Frontiers in Microbiology
2018/04/07 - 2018/05 Antimicrobial Agents and Chemotherapy
2018/02/23 - 2018/03/03 Frontiers in Microbiology
2018/01/31 - 2018/02/16 Applied and Environmental Microbiology ASM
2018/01/29 - 2018/02/08 Frontiers in Medicine
2017/10/12 - 2017/11/02 Frontiers in Microbiology
2017/03/06 - 2017/04/06 BMC Infectious Diseases BioMed Central
2017/03/01 - 2017/04/06 Diagnostic Microbiology and Infectious Diseases Elsevier
2017/02/25 - 2017/03/25 Journal of Global Antimicrobial Resistance Elsevier
2017/01/16 - 2017/03/16 Frontiers in Microbiology
2016/11/09 - 2017/01/09 Frontiers in Microbiology
2016/11/05 - 2016/12/05 Journal of Antimicrobial Microbiology
2016/09/25 - 2016/10/06 Frontiers in Microbiology Frontiers Media S.A
2016/08/26 - 2016/09/15 Frontiers in Microbiology
2016/05/03 - 2016/07/31 Journal Antimicrobial Chemotherapy
2016/04/21 - 2016/06/17 Frontiers in Microbiology
2016/01/18 - 2016/04/17 Frontiers in Microbiology
2016/03/07 - 2016/03/10 Onderstepoort Journal of Veterinary Research
2015/10/17 - 2016/01/14 Frontiers in Microbiology
2015/10/30 - 2015/12/24 Frontiers in Microbiology Frontiers
2015/11/17 - 2015/12/17 Journal of Global Antimicrobial Resistance Elsevier
2015/09/19 - 2015/10/19 Journal of Global Antimicrobial Chemotherapy
2015/05/23 - 2015/05/23 International Journal Food Microbiology
2015/01/10 - 2015/05/14 Journal of Global Antimicrobial Resistance Elsevier
2015/02/13 - 2015/03/13 Journal Antimicrobial Chemotherapy Oxford Journals
2014/11/28 - 2015/03/06 Frontiers in Microbiology Frontiers
2015/01/26 - 2015/02/26 Environmental Science and Pollution Research Springer
2014/11/05 - 2014/11/10 PLOS One PLOS
2014/09/14 - 2014/09/28 Plos One PLOS
2014/04/13 - 2014/05/13 Ecotoxicology and Environmental Safety Elsevier
2013/03/22 - 2013/10/24 Fontiers in Microbiology
2012/12/24 - 2013/04/01 Journal of Global Antimicrobial Resistance Elsevier
2012/11/08 - 2013/02/28 Memórias do Instituto Oswaldo Cruz
2012/11/08 - 2012/12/08 Journal of Clinical Microbiology ASM
2012/05/08 - 2012/06/08 The Journal of Infection in Developing Countries
2011/11/20 - 2012/01/08 Fontiers in Microbiology Frontiers Media S.A
2011/02/12 - 2011/06/24 Fontiers in Microbiology Frontiers
2011/02/08 - 2011/03/08 Chemotherapy Karger
2010/07/08 - 2010/09/08 Water Science and Technology IWA Publications
2010 - 2010 Revista da Faculdade de Ciências da Saúde-Universidade Fernando Pessoa Edições Universidade Fernando Pessoa

Mentoring / Tutoring

Topic Student name
2022/02 - Current MicroMundo Citizen Science Project @ UPorto (3rd Edition) Bárbara Sousa, Daniela Moreira, Francisca Freitas, Francisca Santos, Marta Ferreira, Raquel Martins.
2023/03/02 - 2023/03/23 MicroMundo Citizen Science Project @ UPorto (4th Edition) Carla Ferreira, Carolina Ribeiro, Joana Verissimo, Leonor Meireles, Maria João Rocha
2020/02 - 2020/03 MicroMundo Citizen Science Project @ UPorto (2nd Edition) Bruna Silva, Inês Mercês, Ilda Silva and Mafalda Costa
2019/02 - 2019/03 MicroMundo Citizen Science Project@UPorto Tânia Santos, Débora Santos, Inês Afonso, Ana Félix, Carina Baptista, Carolina Espirito Santo
2015 - 2015 ERASMUS program. Responsible for the partnership with the Eastman Dental Institute. University College of London. Marta Cristina Freitas Monteiro
2013/02 - 2013/12 ERASMUS program. Responsible for the partnership with the Eastman Dental Institute. University College of London. Ana Sofia Barbosa Pinto
2012 - 2012 Dissertation Project (Tutorial Classes) - Master in Clinical Microbiology Ricardo Escada
Distinctions

Award

2023 Best poster
2023 Best poster (second place)
2022 Prémio Jovem Investigador SPM à apresentação oral "Da quinta ao prato: diversidade e persistência de Klebsiella pneumoniae em sistemas de produção intensiva de frango" no evento Microbiologia 2022
Sociedade Portuguesa de Microbiologia, Portugal
2020 Best oral presentation in One Health EJP Annual Scientific Meeting 2020
2020 Best oral presentation of SIFFUP-Simpósio de Investigação FFUP
Faculdade de Farmácia da Universidade do Porto, Portugal
2019 Best oral presentation of SIFFUP-Simpósio de Investigação FFUP
Associação de estudantes da Faculdade de Farmácia da Universiadade do Porto, Portugal
2012 Best poster
5ª Reunião Anual PortFir, Portugal
2011 Nutrition Award 2011- 1st Honorable mention
Associação Portuguesa de Nutricionistas, Portugal
2011 Best poster
4ª Reunião Anual PortFIR - Gestão da Informação para a Nutrição e Segurança Alimentar, Portugal

Other distinction

2024 Scientific Art gallery. Work selected to be exhibited during the 34th European Congress of Clinical Microbiology. Artwork title: Trail to Global Wellness: Advancing One Health at Every Step. Category: Digital art.
2011 Attribution of registration in the 21th ECCMID for the quality of the submitted abstract
European Society of Clinical Microbiology and Infectious Diseases, Portugal
2010 Short term scholarship for the scientific quality of a summary to be presented at 20th ECCMID
Fundação Caloust Gulbenkian, Portugal
2010 Attribution of registration in 20th ECCMID by the quality of the submitted abstract
European Society of Clinical Microbiology and Infectious Diseases, Portugal
2009 Attribution of registration in the 19th ECCMID for the quality of the submitted abstract
European Society of Clinical Microbiology and Infectious Diseases, Portugal
2006 Attribution of registration in the 16th ECCMID by the quality of the submitted abstract
European Society of Clinical Microbiology and Infectious Diseases, Portugal
2005 15th ECCMID registration and travel grant attribution for the quality of the submitted abstract
European Society of Clinical Microbiology and Infectious Diseases, Portugal
2004 Attribution of registration in the 14th ECCMID for the quality of the submitted abstract
European Socieity of Clinical Microbiology and Infectious Diseases, Portugal
2004 Attribution of the registration of a travel scholarship and the registration at the 44th ICCAC for the quality of the submitted abstract
Sociedade Americana de Microbiologia, Portugal