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I graduated in Biochemistry in 2008 (Universidade do Porto and Vrije Universiteit, The Netherlands) and, in 2015 I obtained a PhD in Developmental Biology at the Instituto Gulbenkian de Ciência (Universidade Nova de Lisboa). In my PhD and first Postdoc, I studied the concerted action of transcription factors and chromatin dictating the differentiation of neural stem cells into neurons. Specifically, I showed that the transcription factor Ascl1, a well-known master regulator of neurogenesis, has the remarkable ability of binding to closed chromatin and promote its opening during neurogenesis. This novel mechanism of action explains at the molecular level how Ascl1 is able to regulate different sets of genes along the neurogenic process (Frontiers in Cellular Neurosciences, 2014; Cell Reports, 2015). Within this project, I worked for 4 months at Guillemot Lab at the National Institute for Medical Research, London, United Kingdom. In a subsequent project, I found that the transcription factor MyT1 promotes neurogenesis downstream of Ascl1 not by activating genes that confer neuronal identity but by switching off genes involved in the maintenance of the multipotent features of stem cells. I discovered that MyT1 ensures the synchronization of these events, allowing the coherent progression of neurogenesis (Cell Reports, 2016; Neurogenesis, 2017). Therefore, my work has pioneered in key aspects of the neurogenesis with important implications for the field of reprogramming and regenerative medicine. With this work, I have published four first-author high impact peer-reviewed papers in high-profile journals. In my PhD and first postdoc position, I had the opportunity to explore one of the conceptual questions that fascinates me the most in Biology: how cell fate decisions are molecularly established. This motto continues to inspire me until these days, but now I am tackling it with a different, more applied, perspective. On my current Postdoc position at the Vascular Morphogenesis Lab led by Dr. Claudio Franco, I have been learning about the blood vessel formation (angiogenesis). During angiogenesis, endothelial cells migrate towards avascular areas in response to angiogenic cues, such as VEGF. Remarkably, pathological angiogenesis, where excessive vessels can take on tortuous and poorly branched morphologies, is a hallmark of cancer and diabetic retinopathy and has been associated with abnormally high levels of VEGF. Therefore, the premise of my current research endeavors is that by fine-tuning the activity of VEGF signaling, one should be able to control endothelial cell identity/behavior and, hence, blood vessel formation. With that intent in mind, I devised the current project proposal aiming at translating the current understanding of the fundamental principles of Vascular Biology to the clinical setting. By targeting VEGF signaling, I aim at developing a new anti-angiogenic therapy to block blood vessel formation in cancer and retinopathies. For that, I have already created a cellular system that allows for controlled release of VEGF and its concomitant visualization in live-cells. At the Vascular Morphogenesis Lab, I have already contributed to two publications within the context of two other projects (eLife 2019, Genesis 2019) [5, 6]. Moreover, I have been working independently on the design and development of my own research line. I have been awarded with a highly competitive Postodoctoral Researcher Contract (Junior level, 6 years) funded by FCT in 2017. I was also awarded with a Research & Development project funded by FCT in 2018 to start developing my own research line.
Identification

Personal identification

Full name
Francisca Ferreira de Vasconcelos

Citation names

  • Vasconcelos, F. Francisca

Author identifiers

Ciência ID
6010-F602-DF67
ORCID iD
0000-0003-0601-5513
Scopus Author Id
56435853300

Email addresses

  • franciscafv@gmail.com (Personal)

Knowledge fields

  • Natural sciences - Biological Sciences - Developmental Biology
  • Natural sciences - Biological Sciences - Cell Biology
  • Natural sciences - Biological Sciences - Molecular Biology

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Spanish; Castilian Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
French Beginner (A1) Beginner (A1) Beginner (A1) Beginner (A1)
Education
Degree Classification
2009/09/01 - 2015/09/28
Concluded
PhD Programme in Integrative Biomedical Sciences (Doutoramento)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal

Instituto Gulbenkian de Ciência, Portugal
"Ascl1 and MyT1 transcriptional networks in vertebrate neurogenesis" (THESIS/DISSERTATION)
na
2008
Concluded
Biochemistry (Licenciatura em Bioquímica) (Licenciatura)
Universidade do Porto Faculdade de Ciências, Portugal

Vrije Universiteit Amsterdam, Netherlands
"Profiling the plasma membrane fraction of US28 – Three different approaches to isolate plasma membrane US28 and its signalling partners in order to elucidate US28’s oncogenic role. " (THESIS/DISSERTATION)
17
Affiliation

Science

Category
Host institution
Employer
2017/02/15 - Current Postdoc (Research) Instituto de Medicina Molecular, Portugal
2018/11/12 - 2018/12/04 Visiting Researcher (Research) Instituto de Medicina Molecular, Portugal
Institut Curie, France
2017/07/10 - 2017/07/21 Visiting Researcher (Research) Instituto de Medicina Molecular, Portugal
Institut Curie, France
2015/09/29 - 2016/11/30 Postdoc (Research) Instituto Gulbenkian de Ciência, Portugal
Instituto Gulbenkian de Ciência, Portugal
2010/10/01 - 2015/09/28 Researcher (Research) Instituto Gulbenkian de Ciência, Portugal
Instituto Gulbenkian de Ciência, Portugal
2010/07/01 - 2010/10/31 Visiting Researcher (Research) Instituto Gulbenkian de Ciência, Portugal
National Institute for Medical Research, United Kingdom
2009/03/01 - 2009/08/31 Researcher (Research) Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
2008/03/01 - 2008/08/31 Research Trainee (Research) Vrije Universiteit Amsterdam, Netherlands
Vrije Universiteit Amsterdam, Netherlands
Projects

Grant

Designation Funders
2019/09/01 - 2021/09/30 Flow(in)DR: Deregulated Endothelial Blood Flow Response as a cause of Diabetic Retinopathy
02/SAICT/2017
Principal investigator
Instituto de Medicina Molecular, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2019/03/01 - 2021/02/28 VeCare: Selective retention of VEGF for cancer and retinopathies therapeutics.
825508
Post-doc
Instituto de Medicina Molecular, Portugal
European Research Council
Concluded
2017/02/15 - 2019/02/28 AXIAL.EC - PRINCIPLES OF AXIAL POLARITY-DRIVEN VASCULAR PATTERNING
GA679368
Post-doc Fellow
Instituto de Medicina Molecular, Portugal
European Research Council
Ongoing
2013 - 2015/12/31 Transcriptional integration of Notch and Proneural pathways in vertebrate neurogenesis
Researcher
Instituto Gulbenkian de Ciência, Portugal
Universidade do Algarve Faculdade de Ciências e Tecnologia
Concluded
2009/03/01 - 2009/08/31 Exploring the role of E-cadherin trafficking deregulation in epithelial cancer progression.
Researcher
Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal
Fundação para a Ciência e a Tecnologia
Outputs

Publications

Conference poster
  1. Vasconcelos, F. Francisca. "When to differentiate? Transcriptional control of the onset of neurogenesis by MyT1 and Notch signaling pathways: A genomics approach.". Paper presented in 10th EMBL Conference Transcription and Chromatin, 2018.
  2. Vasconcelos, F. Francisca. "MyT1 transcription factor function in neurogenesis and its interaction with Proneural and Notch transcriptional networks.". Paper presented in 3rd Meeting Portuguese Society for Developmental Biology, 2015.
  3. Vasconcelos, F. Francisca. "MyT1 transcription factor function in neurogenesis and its interaction with Proneural and Notch transcriptional networks.". Paper presented in 2nd Meeting Portuguese Society for Developmental Biology, 2013.
  4. Vasconcelos, F. Francisca. "Transcriptional mechanisms underlying the progression of neurogenesis: the role of the transcription factor MyT1". Paper presented in 6th Annual Meeting of Gulbenkian Students, 2012.
  5. Vasconcelos, F. Francisca. "Transcriptional mechanisms underlying the progression of neurogenesis: the role of the transcription factor MyT1.". Paper presented in XII Meeting Portuguese Society for Neurosciences, 2011.
  6. Vasconcelos, F. Francisca. "Transcriptional mechanisms underlying the progression of neurogenesis: the role of the transcription factor MyT1". Paper presented in 5th Annual Meeting of Gulbenkian Students, 2011.
  7. Vasconcelos, F. Francisca. "Transcriptional mechanisms underlying the progression of neurogenesis: the role of the transcription factor MyT1". Paper presented in The Cambridge Neural Stem Cell Symposium, 2011.
Journal article
  1. Marta F Fidalgo; Catarina G Fonseca; Paulo Caldas; Alexandre ASF Raposo; Tania Balboni; Lenka Henao-Mišíková; Ana R Grosso; Francisca F Vasconcelos; Cláudio A Franco. "Aerocyte specification and lung adaptation to breathing is dependent on alternative splicing changes". Life Science Alliance (2022): https://doi.org/10.26508/lsa.202201554.
    10.26508/lsa.202201554
  2. Figueiredo, Ana Martins; Barbacena, Pedro; Russo, Ana; Vaccaro, Silvia; Ramalho, Daniela; Pena, Andreia; Lima, Aida Pires; et al. "Endothelial cell invasion is controlled by dactylopodia". Proceedings of the National Academy of Sciences 118 18 (2021): e2023829118. http://dx.doi.org/10.1073/pnas.2023829118.
    10.1073/pnas.2023829118
  3. Carvalho, Joana R; Fortunato, Isabela C; Fonseca, Catarina G; Pezzarossa, Anna; Barbacena, Pedro; Dominguez-Cejudo, Maria A; Vasconcelos, Francisca F; et al. "Non-canonical Wnt signaling regulates junctional mechanocoupling during angiogenic collective cell migration". eLife 8 (2019): http://dx.doi.org/10.7554/elife.45853.
    10.7554/elife.45853
  4. Barbacena, Pedro; Ouarné, Marie; Haigh, Jody J.; Vasconcelos, Francisca F.; Pezzarossa, Anna; Franco, Claudio A.. "GNrep mouse: A reporter mouse for front–rear cell polarity". genesis (2019): e23299. http://dx.doi.org/10.1002/dvg.23299.
    10.1002/dvg.23299
  5. Vasconcelos, Francisca F.; Castro, Diogo S.. "Coordinating neuronal differentiation with repression of the progenitor program: Role of the transcription factor MyT1". Neurogenesis 4 1 (2017): e1329683. http://dx.doi.org/10.1080/23262133.2017.1329683.
    Open access • 10.1080/23262133.2017.1329683
  6. Vasconcelos, Francisca F.; Sessa, Alessandro; Laranjeira, Cátia; Raposo, Alexandre A.S.F.; Teixeira, Vera; Hagey, Daniel W.; Tomaz, Diogo M.; et al. "MyT1 Counteracts the Neural Progenitor Program to Promote Vertebrate Neurogenesis". Cell Reports 17 2 (2016): 469-483. http://dx.doi.org/10.1016/j.celrep.2016.09.024.
    10.1016/j.celrep.2016.09.024
  7. Raposo, Alexandre A.S.F.*; Vasconcelos, Francisca F.*; Drechsel, Daniela*; Marie, Corentine; Johnston, Caroline; Dolle, Dirk; Bithell, Angela; et al. "Ascl1 Coordinately Regulates Gene Expression and the Chromatin Landscape during Neurogenesis". Cell Reports 10 9 (2015): 1544-1556. http://dx.doi.org/10.1016/j.celrep.2015.02.025.
    10.1016/j.celrep.2015.02.025
  8. Vasconcelos, Francisca F.; Castro, Diogo S.. "Transcriptional control of vertebrate neurogenesis by the proneural factor Ascl1". Frontiers in Cellular Neuroscience 8 (2014): http://dx.doi.org/10.3389/fncel.2014.00412.
    10.3389/fncel.2014.00412
Preprint
  1. Marta F. Fidalgo; Catarina G. Fonseca; Paulo Caldas; Alexandre A. S. F. Raposo; Tania Balboni; Ana R. Grosso; Francisca F. Vasconcelos; Cláudio A. Franco. "Alternative splicing changes are associated with pre-birth adaptation during lung development". 2022. https://doi.org/10.1101/2022.01.19.476886.
    10.1101/2022.01.19.476886
Thesis / Dissertation
  1. Vasconcelos, F. Francisca. "Ascl1 and MyT1 transcriptional networks in vertebrate neurogenesis". PhD, Instituto Gulbenkian de Ciência, 2015. http://hdl.handle.net/10362/20489.
  2. Vasconcelos, F. Francisca. "Profiling the plasma membrane fraction of US28 – Three different approaches to isolate plasma membrane US28 and its signalling partners in order to elucidate US28’s oncogenic role.". Degree, Universidade do Porto Faculdade de Ciências, 2008.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2021/05/27 Alternative splicing changes are associated with pre-birth adaptation during mouse lung development  iMM postdoc day
Instituto de Medicina Molecular João Lobo Antunes (Lisboa, Portugal)
2016/10/23 MyT1 counteracts the neural progenitor program to promote vertebrate neurogenesis. 11th Meeting Portuguese Society for Developmental Biology 10th Anniversary Symposium
(Lisboa, Portugal)
2016/10/21 MyT1 counteracts the neural progenitor program to promote vertebrate neurogenesis. 11th Meeting Spanish Society for Developmental Biology, Girona, 19-21 October 2016
(Girona, Spain)
2014/06/04 MyT1 transcription factor function in neurogenesis and its interaction with Proneural and Notch transcriptional networks. Development in Action Meeting
(Faro, Portugal)
2013/05/29 MyT1 transcription factor function in neurogenesis and its interaction with Proneural and Notch transcriptional networks. AMeeGuS 2013: 7th Annual Meeting of Gulbenkian Students,
(Seia, Portugal)
2011/12/13 Transcriptional mechanisms underlying the progression of neurogenesis: the role of the transcription factor MyT1. Chromatin Club
(Lisboa, Portugal)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2018 - 2019 Mechanisms of Hypoxia-Independent Angiogenesis
Supervisor of Marta Filipa Alves Fidalgo
Medicine and Molecular Oncology (Master)
Instituto de Medicina Molecular, Portugal

Universidade do Porto Faculdade de Medicina, Portugal

Event organisation

Event name
Type of event (Role)
Institution / Organization
2019 - 2019 Leducq ATTRACT: Arterial flow as attractor for endothelial cell migration 3rd Network meeting, Palmela, Portugal (2-4 April 2019) (2019/04/02 - 2019/04/04)
Meeting (Co-organisor)
2018 - 2018 Symposium on Tumour Biology: from basic biology to disease, Lisboa, Portugal (2018/12/05 - 2018/12/06)
Symposium (Member of the Organising Committee)
2018 - 2018 Cell Migration under confinement Workshop 2018, Douro, Portugal (2018/05/02 - 2018/05/04)
Workshop (Co-organisor)
2018 - 2018 Joint Lab Retreat on Vascular Heterogeneity, with Helmut Augustin Lab (DKFZ, Heidelberg, Germany) in Lisbon, Portugal (2018/10/25 - 2018/10/25)
Meeting (Co-organisor)
2018 - 2018 Joint Lab Retreat on Trafficking and Cell Migration in Cancer, with Franck Perez Lab (Institut Curie, Paris, France) and Giorgio Scita Lab (IFOM, Milan, Italy) in Sintra, Portugal (2018/06/06 - 2018/06/08)
Meeting (Co-organisor)
2017 - 2018 Science Outreach Activity: Understanding the work behind a Research Paper, Students from Escola Secundária da Ramada, Odivelas, Portugal (2017 - 2018)
Other (Co-organisor)
2015 - 2016 Science Outreach Activity: "UpClose & In vivo", a podcast program consisting on a series of interviews to Instituto Gulbenkian de Ciência visiting scientists (2015 - 2016)
Other (Other)
2012/07 - 2012/07 Science Outreach Activity: Speed-dating with Scientists - Optimus Alive, Algés, Portugal (2012/07)
Other (Other)
2011/07 - 2011/07 Science Outreach Activity: Speed-dating with Scientists - Optimus Alive, Algés, Portugal (2011/07 - 2011/07)
Other (Other)

Event participation

Activity description
Type of event
Event name
Institution / Organization
2021/01 - 2031/01 Leadership and Management Skills Course for Postdocs
Workshop
Leadership and Management Skills Course for Postdocs
hfp consulting :: supporting leadership in science, Germany
2020/01 - 2020/01 Fundamentals of Project Planning and Management, University of Virginia (Online Course at Coursera)
Workshop
Fundamentals of Project Planning and Management
2019/12/13 - 2019/12/13 DevBioMed Symposium – From Developmental Biology to Medicine and Back, Lisbon, Portugal
Symposium
DevBioMed Symposium – From Developmental Biology to Medicine and Back
Fundação Champalimaud, Portugal
2019/11/14 - 2019/11/15 Lisbon Area Postdoc Meeting 2019, Caparica, Portugal
Meeting
Lisbon Area Postdoc Meeting 2019
2019/09/24 - 2019/09/27 Introduction to Digital Bioimage Analysis Workshop , 24-27 September 2019 i3S. Porto, Portugal
Workshop
Introduction to Digital Bioimage Analysis Workshop
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
2018/07/04 - 2018/07/06 Bioinformatics Linux Cluster Usage Course, iMM, Lisboa, Portugal
Workshop
Bioinformatics Linux Cluster Usage Course
Instituto de Medicina Molecular, Portugal
2018/05/02 - 2018/05/04 Cell Migration under confinement Workshop 2018, Douro, Portugal
Workshop
Cell Migration under confinement Workshop 2018
2018/04/11 - 2018/04/18 1st Cell Biology and Cancer Course, Institut Curie, Paris, France
Workshop
1st Cell Biology and Cancer Course, Institut Curie
Institut Curie, France
2017/05/22 - 2017/05/24 Cell migration under confinement Workshop from Retubi Consortium, Palmela, Portugal
Workshop
Cell migration under confinement Workshop from Retubi Consortium
2016/03/29 - 2016/04/01 NDARC16 - Next-Generation Sequencing Data Analysis, RNA-Seq, and ChIP-Seq, Gulbenkian Training Programme in Bioinformatics, Gulbenkian Science Institute, Oeiras, Portugal
Workshop
Instituto Gulbenkian de Ciência, Portugal
2016/03/11 - 2016/03/14 Improving skills to better communicate with lay audiences Workshop, Oeiras, Portugal
Workshop
Improving skills to better communicate with lay audiences Workshop
Instituto Gulbenkian de Ciência, Portugal
2012/10 - 2012/11 Theoretical Course in Laboratory Animal Sciences, Instituto de Biologia Molecular e Celular (Porto) and Instituto Gulbenkian de Ciência (Oeiras), Portugal
Workshop
Instituto Gulbenkian de Ciência, Portugal
2011/10/19 - 2011/10/20 PA11 - Pathway Analysis and Modelling of Biological Networks, Gulbenkian Training Programme in Bioinformatics, Gulbenkian Science Institute, Oeiras, Portugal
Workshop
Instituto Gulbenkian de Ciência, Portugal
2011/06/27 - 2011/06/30 HGP11 - Hunting for Genes and Promoters, Gulbenkian Training Programme in Bioinformatics, Gulbenkian Science Institute, Oeiras, Portugal
Workshop
Instituto Gulbenkian de Ciência, Portugal
2010/12/06 - 2010/12/10 IB10 - Introductory Bioinformatics, Gulbenkian Training Programme in Bioinformatics, Gulbenkian Science Institute, Oeiras, Portugal
Workshop
Instituto Gulbenkian de Ciência, Portugal
2010/11/11 - 2010/11/19 IGC Practical Course on Animal Handling and Experimentation - Good practices on Rodends, Fish and Frogs II, Instituto Gulbenkian de Ciência, Oeiras, Portugal
Workshop
Instituto Gulbenkian de Ciência, Portugal

Jury of academic degree

Topic
Role
Candidate name (Type of degree)
Institution / Organization
2020/07/03 Jury of the final dissertation from the Undergraduate Programme in Cell and Molecular Biology Dissertation title: Efeitos de um microambiente tumoral rico em colesterol na expressão de vinculina e FAK em células do cancro da mama
(Thesis) Main arguer
Catarina de Oliveira Chanoca Gomes (Other)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
2020/07/02 Jury of the final dissertation from the Undergraduate Programme in Cell and Molecular Biology; Dissertation title: T. brucei Differential Vascular Interactions for Establishment of Adipose Tissue Reservoirs
(Thesis) Main arguer
Mafalda Sofia Augusto Pedro (Other)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal

Association member

Society Organization name Role
2011 - Current Portuguese Society for Developmental Biology Associate

Interview (tv / radio show)

Program Topic
2016/11/09 - 2016/11/09 Interview on science radio program "Antena 2 Ciência" science outreach

Mentoring / Tutoring

Topic Student name
2020/12/01 - Current VeCare: Selective retention of VEGF for cancer and retinopathies therapeutics André Brás Gonçalves, Postdoctoral researcher
2019 - Current Molecular Biology Techniques and Lab organization Daniela Ramalho, Research Technician
2018/10 - Current Alternative splicing during mouse lung development Marta Filipa Alves Fidalgo - Predoctoral Researcher
2018 - Current Alternative splicing during mouse lung development  Catarina Gonçalves Fonseca, PhD Student
2018 - Current Molecular Biology Techniques and Lab organization Yulia Carvalho, Research Technician
2019/11/01 - 2020/10/31 VeCare: Selective retention of VEGF for cancer and retinopathies therapeutics Ana Isabel Prim Padilha, Postdoctoral researcher
2017 - 2018 Molecular Biology Techniques and Lab organization Dalila Silva, Research Technician
2016 - 2016 Transcription factors in neurogenesis Alexandra Vargas - Master Student Rotation - From Faculty of Sciences - University of Lisbon
2016 - 2016 Transcription factors in Neurogenesis Javier Estevez Cores, Master Student Rotation - From University of Oxford
2015 - 2016 Transcription factors in neurogenesis and neuronal reprogramming Diogo Miguel Rosa Tomaz - Master Student

Other jury / evaluation

Activity description Institution / Organization
2020 - Current Reviewer for the international scientific journal Embo Reports
2020 - Current Reviewer for the international scientific journal Cell Reports
2019 - Current Reviewer for the international scientific journal Journal of Cell Science
2019 - Current Reviewer for the international scientific journal Plos Biology
2014 - Current Reviewer for the international scientific journal Development
Distinctions

Award

2008 Best student award of Biochemistry degree
Universidade do Porto Faculdade de Ciências, Portugal
2006 Prof.Doutor Fernando Serrão Award - Best classification in Organic Chemistry I and II
Universidade do Porto Faculdade de Ciências, Portugal

Other distinction

2019 Junior Researcher Contract - CEECIND/04251/2017
Fundação para a Ciência e a Tecnologia, Portugal
2009 Research associate (BI) - PTDC/SAU-OBD/64319/2006
2009 PhD Fellowship - SFRH / BD / 51178 /2010
Fundação para a Ciência e a Tecnologia, Portugal