Identification
Personal identification
- Full name
- José Rodrigo da Silva
Citation names
- Silva, José
- da-Silva, J. R.
Author identifiers
- Ciência ID
- 621F-50E1-C6FB
- ORCID iD
- 0000-0002-3166-4454
Email addresses
- joserodrigope@gmail.com (Personal)
Telephones
- Telephone
-
- 214469628 Ext.: 1628 (Professional)
Addresses
- MostMicro, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa. Avenida da Republica, 2780-157, Oeiras, Oeiras, Portugal (Professional)
Websites
Knowledge fields
- Natural sciences - Biological Sciences - Microbiology
- Medical and Health Sciences - Health Sciences - Infectious Diseases
- Agrarian Sciences
Languages
Language | Speaking | Reading | Writing | Listening | Peer-review |
---|---|---|---|---|---|
Portuguese (Mother tongue) | |||||
English | Upper intermediate (B2) | Upper intermediate (B2) | Upper intermediate (B2) | Advanced (C1) | Upper intermediate (B2) |
German | Beginner (A1) | Beginner (A1) | Beginner (A1) | Beginner (A1) | Beginner (A1) |
Spanish; Castilian | Intermediate (B1) | Intermediate (B1) | Beginner (A1) | Upper intermediate (B2) | Beginner (A1) |
Education
Degree | Classification | |
---|---|---|
2013/09/01 - 2018/03/23
Concluded
|
Biology (Doutoramento)
Major in Microbiology
Universidade de Évora, Portugal
Universidade de Évora Instituto de Ciências Agrárias e Ambientais Mediterrânicas, Portugal "Improvement of chickpea rhizobia by genetic transformation with symbiosis genes" (THESIS/DISSERTATION)
|
Approved with High Distinction |
2011/03/05 - 2013/02/26
Concluded
|
Agronomy - Soil Science (Master)
Major in Microbiology of soil
Universidade Federal Rural do Rio de Janeiro, Brazil
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil "Envolvimento da Proteína EnvZ nos Processos de Osmotolerância e Fixação Biológica de Nitrogênio em Gluconacetobacter diazotrophicus" (THESIS/DISSERTATION)
|
|
2006/06/06 - 2011/01/31
Concluded
|
Engineer's degree in Agronomy (Bachelor)
Universidade Federal Rural do Rio de Janeiro, Brazil
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil "OBTENÇÃO DE FRAGMENTOS DERIVADOS DE TRANSCRITOS DIFERENCIALMENTE EXPRESSOS EM CANA-DE-AÇÚCAR SUBMETIDA A ESTRESSE HÍDRICO" (THESIS/DISSERTATION)
|
7.5 |
Affiliation
Science
Category Host institution |
Employer | |
---|---|---|
2019/11/01 - 2022/04/30 | Contracted Researcher (Research) | Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal |
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal | ||
2019/01/03 - 2019/10/23 | Postdoc (Research) | Évora University, Portugal |
Évora University, Portugal | ||
2017/11/01 - 2018/05/23 | Researcher (Research) | Évora University, Portugal |
Évora University, Portugal | ||
2008 - 2012 | Research Trainee (Research) | Conselho Nacional de Desenvolvimento Científico e Tecnológico, Brazil |
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil | ||
2006 - 2007 | Research Trainee (Research) | Universidade Federal Rural do Rio de Janeiro, Brazil |
Universidade Federal Rural do Rio de Janeiro, Brazil |
Other Careers
Category Host institution |
Employer | |
---|---|---|
2006 - 2010 | Assistente Técnico (Assistente Técnico) | Universidade Federal Rural do Rio de Janeiro, Brazil |
Universidade Federal Rural do Rio de Janeiro, Brazil |
Others
Category Host institution |
Employer | |
---|---|---|
2020/05 - 2022/04/30 | Volunteer on ITQB Institute to carry out SARS-CoV-2 diagnostic tests | Câmara Municipal de Oeiras, Portugal |
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal | ||
2013 - 2017 | PhD student | Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Brazil |
Évora University, Portugal | ||
2010 - 2012 | Master student | Conselho Nacional de Desenvolvimento Científico e Tecnológico, Brazil |
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil |
Projects
Contract
Designation | Funders | |
---|---|---|
2019/11/01 - 2022/04/30 | STOPneumo – Targeted approaches to contain pneumococcal disease
PTDC/BIA-MIC/30703/2017
Post-doc
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2019/01/03 - 2019/10/23 | Improvement of pasture production in acid soils in the Montado system: Chemical and biological approach
ALT20-03-0145-FEDER-000039
Post-doc
Évora University, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2017/11/01 - 2018/05/23 | Exploiting beneficial associations with chickpea: the role of non-rhizobial endophytic bacteria in the rhizobia-legume symbiosis
POCI-01-0145-FEDER-016810 (PTDC/AGR-PRO/2978/2014)
Research Fellow
Évora University, Portugal
Fundação para a Ciência e a Tecnologia, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2013/09/01 - 2017/08/31 | Evolution of symbiosis genes in rhizobia: chickpea mesorhizobia as case study
PTDC/BIA-EVF/4158/2012
PhD Student Fellow
Évora University, Portugal
Fundação para a Ciência e a Tecnologia, Portugal |
Fundação para a Ciência e a Tecnologia Coordenação de Aperfeiçoamento de Pessoal de Nível Superior Concluded
|
2010/02 - 2012/01 | Instituto Nacional de Ciência e Tecnologia de Fixação Biológica de Nitrogênio
Master Student Fellow
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
Universidade Federal Rural do Rio de Janeiro, Brazil |
Conselho Nacional de Desenvolvimento Científico e Tecnológico
Concluded
|
2007 - 2010 | Prospecção de genes e proteínas associados ao estresse hídrico e floração precoce em cana-de-açúcar
PVA2114-2011
Scientific Initiation Fellow
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
Conselho Nacional de Desenvolvimento Científico e Tecnológico
Concluded
|
Outputs
Publications
Book chapter |
|
Conference poster |
|
Journal article |
|
Activities
Oral presentation
Presentation title | Event name Host (Event location) |
|
---|---|---|
2021/10/22 | Improvement of symbiotic performance by the heterologous expression of an envZ-like gene | 14th European Nitrogen Fixation Conference (ENFC)
Online conference
|
2020/09/23 | A partnership between local government, a primary-care center and a research institute to prevent COVID-19 outbreaks through active screening of civil servants in a Portuguese municipality. Presented by Simões, A. | ECCVID - ESCMID Conference on Coronavirus Disease |
2019 | Insights into the multifunctionality of Pseudomonas sp. Q1: From genomic analysis to promotion of the legume - rhizobia symbioses. Presented by Torres, D. P. | XVII Reunión Nacional de la Sociedad Española de Fijación de Nitrógeno y VI Portuguese - Spanish Congress on Nitrogen Fixation
(Madrid, Spain)
|
2016/10/20 | Symbiotic Effectiveness of Chickpea Mesorhizobium Strains can be Increased by the Overexpression of Non-Symbiosis Genes | 1st Meeting of PhD Students in Environment and Agriculture
(Évora, Portugal)
|
2012 | Função da Proteína EnvZ na osmotolerância e fixação biológica de nitrogênio em Gluconacetobacter diazotrophicus | XII Semana Científica Johanna Döbereiner
(Seropédica, Brazil)
|
2011 | Envolvimento da Proteína EnvZ nos processos de osmotolerância e fixação biológica de nitrogênio em Gluconacetobacter diazotrophicus. | XI Semana Científica Johanna Döbereiner
(Seropédica, Brazil)
|
2010 | Obtenção de fragmentos derivados de transcritos diferencialmente expressos em cana-de-açúcar submetida à estresse hídrico | X Semana Científica Jonhanna Döbereiner
(Seropédica, Brazil)
|
2010 | Identificação de genes do feijoeiro envolvidos na simbiose com a Rhizobium tropici | X Semana Johanna Döbereiner
Embrapa Agrobiologia (Seropédica, Brazil)
|
2010 | Prospecção de genes diferencialmente expressos em nódulos de feijão-caupi submetido ao estresse térmico e déficit hídrico | X Semana Cintífica Johanna Döbereiner
Embrapa Agrobiologia (Seropédica, Brazil)
|
2009 | Uso de marcador molecular na avaliação de feijão com capacidade de Fixação Biológica de Nitrogênio | IX Semana Científica Johanna Döbereiner
(Seropédica, Brazil)
|
2009 | Isolamento e caracterização de genes do feijoeiro envolvidos na simbiose com o Rhizobium tropici | IX Semana Científica Johanna Döbereiner
Embrapa Agrobiologia (Seropédica, Brazil)
|
2008 | Prospecção de genes associados a estresse abiótico em cana-de-açúcar com floração precoce | VIII Semana Científica Johanna Döbereiner
(Seropédica, Brazil)
|
Supervision
Thesis Title Role |
Degree Subject (Type) Institution / Organization |
|
---|---|---|
2021/09 - Current | Characterization of commensal strains with bacteriocin-mediated inhibition against Streptococcus pneumoniae
Co-supervisor
|
Applied Microbiology (Master)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
|
2021/07/26 - 2021/07/30 | Short internship
Co-supervisor
|
Cell and Molecular Biology (Degree)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
|
2021/02/22 - 2021/06/25 | Bacterial cytological profiling to explore cellular targets of bacteriocins produced by commensal streptococci
Co-supervisor
|
B.Sc in Cell and Molecular Biology (Degree)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
|
Event participation
Activity description Type of event |
Event name Institution / Organization |
|
---|---|---|
2021/10/12 - 2021/10/17 | Participation on FIC.A - International Science Festival - OUTREACH ACTIVITY
Festival
|
FIC.A - International Science Festival
Senciência, Portugal
|
2021/09/20 - 2021/09/24 | Course on Laboratory Animal Science - Category B
Other
|
Curso Teórico e Prático do Curso FFUL – SPCAL de Categoria B de Ciências em Animais de Laboratório – 4ª Edição
Universidade de Lisboa Faculdade de Farmácia, Portugal
|
2021/05/30 - 2021/05/30 | Participation on Open Day ITQB/NOVA - OUTREACH ACTIVITY
Exhibition
|
Dia Aberto
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
|
2021/02/19 - 2021/02/19 | Chair of the session Host-Pathogens Interactions. Organized by the students, this meeting is an opportunity for ITQB NOVA
PhD students to present and discuss their work amongst each other and with other ITQB NOVA scientists.
Meeting
|
11th ITQB NOVA PhD Students' Meeting
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
|
2021/02/02 - 2021/02/04 | Workshop covered the Optical Microscopy Techniques and Expertise
Workshop
|
Optical microscopy at COLife & Friends: learning the basics
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
Fundação Champalimaud, Portugal Universidade Nova de Lisboa Centro de Estudos de Doenças Crónicas, Portugal Instituto Gulbenkian de Ciência, Portugal |
2020/11/24 - 2020/11/27 | Participation on Spanish & Portuguese Advanced Optical Microscopy Meeting
Meeting
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2020/01/22 - 2020/01/24 | Chair of the session Microbial Strategies.
Organized by the students, this meeting is an opportunity for ITQB NOVA PhD students to present and discuss their work amongst
each other and with other ITQB NOVA scientists.
Meeting
|
10th ITQB NOVA PhD Students' Meeting
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
|
2020 - 2020 | Course on High-Content Screening, High-Throughput Screening.
Workshop focused on HCS technologies, from the biological questions to image analysis and data mining solutions.
Workshop
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2020 - 2020 | Workshop on Open access to Bioimaging infrastructures: Requirements, opportunities and challenges
Workshop
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2020 - 2020 | Automating multimodal microscopy with NanoJ-Fluidics
Workshop
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2020 - 2020 | Workshop on Lightfield Microscopy
Workshop
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2020 - 2020 | Worshop on Single particle tracking with nanobodies & iSCAT
Workshop
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2020 - 2020 | Workshop on Practical Applications of Deep learning for Bioimage Analysis
Workshop
|
Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 - SPAOM2020 |
2019/06/27 - 2019/06/28 | Mediterranean Institute for Agriculture, Environment and Development (MED) organizers seminars and posters sessions where
scientists can discuss their works with each other.
Meeting
|
Med Meeting - Mediterranean Institute for Agriculture, Environment and Development
Évora University, Portugal
|
2019/06/10 - 2019/06/12 | This Congress is about biological nitrogen fixation and plant-microorganism interaction and their technological applications
Congress
|
XVII Reunión Nacional de la Sociedad Española de Fijación de Nitrógeno y VI Portuguese - Spanish Congress on Nitrogen Fixation
Universidad Autónoma de Madrid, Spain
|
2017/09/03 - 2017/09/07 | This Conference covers a wide range of disciplines including evolution, ecology, genomics, biochemistry, physiology, crop
production and engineering and novel uses of “Nitrogen fixation for Agriculture and the Environment”.
Conference
|
20th International Congress on Nitrogen Fixation |
2017/07/03 - 2017/07/05 | Participation on Encontro Ciência (Meeting with Science and Technology) - OUTREACH ACTIVITY
Exhibition
|
Meeting with Science and Technology
Fundação para a Ciência e a Tecnologia, Portugal
Ciência Viva, Portugal |
2017 - 2017 | The meeting aims to create a space that provides the meeting between doctoral students, in order to streamline the scientific
discussion and to highlight those who will become the researchers of tomorrow.
Meeting
|
2st Meeting of PhD Students in Environment and Agriculture
Évora University, Portugal
|
2016 - 2016 | The meeting aims to create a space that provides the meeting between doctoral students, in order to streamline the scientific
discussion and to highlight those who will become the researchers of tomorrow.
Meeting
|
1st Meeting of PhD Students in Environment and Agriculture
Évora University, Portugal
|
2016 - 2016 | Portuguese Congress of Biochemistry
Congress
|
XIX National Congress of Biochemistry |
2016 - 2016 | Course on Improvement of oral presentation impact in scientific events and Strategies and tools to improve scientific productivity
Workshop
|
Évora University, Portugal
|
2016 - 2016 | Confocal microscopy training
Other
|
Salamanca University, Spain
|
2015 - 2015 | The congress aims to provide an international scientific forum by which researchers from all over the world share their knowledge,
exchange ideas, and discuss scientific policy and regulatory issues associated with the microbiology and the biotechnology
in the future
Congress
|
Congress of Microbiology and Biotechnology |
2014 - 2014 | This event has provided unique platforms to share and discuss scientific news on nitrogen fixation and the molecular interaction
between plants and symbiotic microorganisms.
Conference
|
ENFC2014 11th European Nitrogen Fixation Conference |
2012 - 2012 | The Johanna Döbereiner Scientific Week is an initiative that intends to keep the memory of the researcher Johanna Döbereiner
who, in the 1950s, was one of the pioneers in the studies on Biological Nitrogen Fixation and symbiosis.
Meeting
|
XII Semana Científica Johanna Döbereiner
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
2012 - 2012 | Course on Applied Microbial Ecology
Workshop
|
Universidade Federal Rural do Rio de Janeiro, Brazil
|
2011 - 2011 | The Johanna Döbereiner Scientific Week is an initiative that intends to keep the memory of the researcher Johanna Döbereiner
who, in the 1950s, was one of the pioneers in the studies on Biological Nitrogen Fixation and symbiosis.
Meeting
|
XI Semana Científica Johanna Döbereiner
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
2011 - 2011 | Course on Annotation of prokaryotic genomes utilizing GAAT
Workshop
|
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
2010 - 2010 | The Johanna Döbereiner Scientific Week is an initiative that intends to keep the memory of the researcher Johanna Döbereiner
who, in the 1950s, was one of the pioneers in the studies on Biological Nitrogen Fixation and symbiosis.
Meeting
|
X Semana Científica Johanna Döbereiner |
2010 - 2010 | The Jornada de Iniciação Científica da UFRRJ is a meeting where young scientists share their works with the academic comunity.
Meeting
|
XX Jornada de Iniciação Científica da UFRRJ
Universidade Federal Rural do Rio de Janeiro, Brazil
|
2009 - 2009 | The Johanna Döbereiner Scientific Week is an initiative that intends to keep the memory of the researcher Johanna Döbereiner
who, in the 1950s, was one of the pioneers in the studies on Biological Nitrogen Fixation and symbiosis.
Meeting
|
IX Semana Científica Johanna Döbereiner
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
2008 - 2008 | The Johanna Döbereiner Scientific Week is an initiative that intends to keep the memory of the researcher Johanna Döbereiner
who, in the 1950s, was one of the pioneers in the studies on Biological Nitrogen Fixation and symbiosis.
Meeting
|
VIII Semana Científica Johanna Döbereiner
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
2008 - 2008 | Microbial Genetics Meeting in Brazil
Meeting
|
REGEM- Microbial Genetics Meeting |
2008 - 2008 | Brazilian Genetics Congress
Congress
|
Brazilian Genetics Congress |
2008 - 2008 | Course on Biological safety in laboratories
Seminar
|
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
2008 - 2008 | Course on Screening differentially expressed genes
Workshop
|
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|
Jury of academic degree
Topic Role |
Candidate name (Type of degree) Institution / Organization |
|
---|---|---|
2011 | Superexpressão do transportador de amônio OsAMT1;3 em raízes de Arabidopsis thaliana e fenótipo associado
(Thesis) Arguer
|
Flávia Caldeira do Nascimento (Other)
Universidade Federal Rural do Rio de Janeiro, Brazil
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil |
Course / Discipline taught
Academic session | Degree Subject (Type) | Institution / Organization | |
---|---|---|---|
2021/04/22 - 2021/04/22 | Módulo opcional Biologia Molecular e Epidemiologia de Bactérias Patogénicas Gram-Positivas | Mestrado em Microbiologia Médica (Mestrado) | Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal |
2012 - 2012 | Biologia do Solo | Agronomia (Bachelor) | Universidade Federal Rural do Rio de Janeiro, Brazil |
Evaluation committee
Activity description Role |
Institution / Organization | Funding entity | |
---|---|---|---|
2021/02/19 - 2021/02/19 | Posters Evaluation of the Session Host-Pathogens Interactions. Organized by the students, the PhD meeting is an opportunity
for ITQB NOVA PhD students to present and discuss their work amongst each other and with other ITQB NOVA scientists.
Evaluator
|
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal |
Journal scientific committee
Journal title (ISSN) | Publisher | |
---|---|---|
2021/11/02 - Current | Horticulturae (2311-7524) | MDPI |
2021/10/21 - Current | Agronomy (EISSN 2073-4395) | MDPI |
2021/09/20 - Current | Sustainability (EISSN 2071-1050) | MDPI |
Other jury / evaluation
Activity description | Institution / Organization | |
---|---|---|
2021/01 - 2021/01 | Member of the evaluation panel of the scholarship 003/BI/2021, under the framework of the project STOPneumo - Targeted approaches to contain pneumococcal disease | Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal |
Distinctions
Award
2012 | Best Oral Presentation Master's category
EMBRAPA Centro Nacional de Pesquisa de Agrobiologia, Brazil
|