Identification
Personal identification
- Full name
- Daniel Filipe Silva Ribeiro
- Gender
- Male
Citation names
- Ribeiro, Daniel
Author identifiers
- Ciência ID
- 7016-104B-7CE8
- ORCID iD
- 0000-0003-3660-9646
Knowledge fields
- Natural sciences - Biological Sciences - Molecular Biology
- Exact Sciences - Computer and Information Sciences - Bioinformatics
- Natural sciences - Biological Sciences - Cell Biology
- Natural sciences - Biological Sciences - Cell Biology
Languages
Language | Speaking | Reading | Writing | Listening | Peer-review |
---|---|---|---|---|---|
Portuguese (Mother tongue) | |||||
English | Advanced (C1) | Proficiency (C2) | Advanced (C1) | Advanced (C1) | Advanced (C1) |
Education
Degree | Classification | |
---|---|---|
2023/07/01 - 2023/09/30
Concluded
|
EMBO Scientific Exchange Grant (Outros)
University of Birmingham Institute of Inflammation and Ageing, United Kingdom
|
|
2021/10/01 - 2022/08/31
Ongoing
|
SENSe: Targeting induced-senescent cells: a novel approach to promote spinal cord regeneration in mammals (Pós-doutoramento)
Instituto de Medicina Molecular, Portugal
|
|
2022/03/25 - 2022/04/22
Concluded
|
Single-Cell Genomics for Beginners (Outros)
Major in Computational Biology
Universidade do Minho Instituto de Investigação em Ciências da Vida e Saúde, Portugal
|
|
2016/08/16 - 2021/08/15
Concluded
|
IL7sigNETure - IL-7/IL-7R signaling networks in health and malignancy (Pós-doutoramento)
Instituto de Medicina Molecular, Portugal
|
|
2021/07/05 - 2021/07/10
Concluded
|
RiboMed course on single cell RNA (Outros)
Instituto de Medicina Molecular, Portugal
|
|
2018/07/23 - 2018/07/27
Concluded
|
PPB18 - Programming in Python for Biologists (Outros)
Instituto Gulbenkian de Ciência, Portugal
|
|
2017/09/20 - 2017/09/22
Concluded
|
IO17 - Large-scale bioinformatics for Immuno-Oncology (Outros)
Instituto Gulbenkian de Ciência, Portugal
|
|
2011/01/01 - 2016/12/12
Concluded
|
Ciências Biomédicas (Doutoramento)
Major in Especialidade: Biologia Celular e Molecular
Universidade de Lisboa Faculdade de Medicina, Portugal
Instituto de Medicina Molecular, Portugal "Dissecting the cellular and molecular mechanisms of IL-7-mediated leukemia T-cell survival, proliferation and cell growth
" (THESIS/DISSERTATION)
|
Aprovado com distinção e louvor |
2007 - 2009
Concluded
|
Biologia Molecular Humana (Mestrado)
Major in Biologia Molecular Humana
Universidade de Lisboa Faculdade de Ciências, Portugal
Instituto de Medicina Molecular, Portugal "Estudo do envolvimento de FOXO3a e GSK3 na viabilidade e proliferação de células LLA-T estimuladas por IL-7. " (THESIS/DISSERTATION)
|
18 |
2004 - 2007
Concluded
|
Biologia (Licenciatura)
Major in Biologia Celular e Biotecnologia
Universidade de Lisboa Faculdade de Ciências, Portugal
|
14 |
Affiliation
Science
Category Host institution |
Employer | |
---|---|---|
2021/10/01 - Current | Postdoc (Research) | Instituto de Medicina Molecular, Portugal |
Instituto de Medicina Molecular, Portugal | ||
2017/08/16 - 2021/08/15 | Postdoc (Research) | Instituto de Medicina Molecular, Portugal |
Instituto de Medicina Molecular, Portugal | ||
2016/03/01 - 2017/08/15 | Researcher (Research) | Instituto de Medicina Molecular, Portugal |
2010/01/01 - 2010/12/31 | Researcher (Research) | Instituto de Medicina Molecular, Portugal |
Others
Category Host institution |
Employer | |
---|---|---|
2011/01/01 - 2016/12/31 | PhD Student | Instituto de Medicina Molecular, Portugal |
2008/09/01 - 2009/12/31 | MSc Student | Instituto de Medicina Molecular, Portugal |
Projects
Grant
Designation | Funders | |
---|---|---|
2023/07/01 - 2023/09/30 | Identifying injury-induced senescent cells in the spinal cord by single cell RNA-seq
10216
Researcher
University of Birmingham Institute of Inflammation and Ageing, United Kingdom
|
EMBO - European Molecular Biology Organization
Concluded
|
2017/08/16 - 2021/08/15 | IL7sigNETure - IL-7/IL-7R signaling networks in health and malignancy
ERC CoG-648455
Post-doc
Instituto de Medicina Molecular, Portugal
|
European Research Council
Concluded
|
2016/03/01 - 2017/08/15 | IL7sigNETure - IL-7/IL-7R signaling networks in health and malignancy
ERC CoG-648455
Research Fellow
Instituto de Medicina Molecular, Portugal
|
European Research Council
Ongoing
|
2015/04/27 - 2016/02/29 | Dissecting the impact of IL7R gain-of-function mutations in T-cell leukemia
PTDC/SAU-ONC/122428/2010
Research Fellow
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/01/01 - 2014/12/31 | Dissecting the cellular and molecular mechanisms of IL-7-mediated leukemia T-cell survival, proliferation and cell growth
SFRH/BD/69781/2010
PhD Student Fellow
Instituto de Medicina Molecular, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/01/01 - 2010/12/31 | Regulation of ZAP-70 and PTEN activity and stability in chronic lymphocytic leukemia: prognostic and therapeutic implications
PIC/IC/83193/2007
Research Fellow
Instituto de Medicina Molecular, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
Contract
Designation | Funders | |
---|---|---|
2023/04/01 - Current | Exploring the hidden life of African trypanosomes: parasite fat tropism and implications for disease
771714
Research Fellow
Instituto de Medicina Molecular, Portugal
|
European Commission
Ongoing
|
2021/01/01 - 2025/12/31 | Institute of Molecular Medicine João Lobo Antunes
LA/P/0082/2020
Universidade de Lisboa Instituto de Medicina Molecular João Lobo Antunes, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2023 - 2025 | Endothelial CD9 as a new anti-inflammatory target to promote spinal repair.
2022.05669.PTDC
Research Fellow
Instituto de Medicina Molecular, Portugal
|
Fundação para a Ciência e a Tecnologia |
2023 - 2025 | Improving spinal cord regeneration by modulating neutrophil inflammation: lessons from a zebrafish perspective
2022.02766.PTDC
Research Fellow
Instituto de Medicina Molecular, Portugal
|
Fundação para a Ciência e a Tecnologia |
2021/10/01 - 2023/03/31 | SENSe: Targeting induced-senescent cells: a novel approach to promote spinal cord regeneration in mammals
HR18-00187
Post-doc Fellow
Instituto de Medicina Molecular, Portugal
|
Caixa d'Estalvis i Pensions de Barcelona
Concluded
|
2019/01/01 - 2019/12/31 | Instituto de Medicina Molecular
UID/BIM/50005/2019
Universidade de Lisboa Instituto de Medicina Molecular João Lobo Antunes, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
Outputs
Publications
Conference poster |
|
Journal article |
|
Online resource |
|
Thesis / Dissertation |
|
Website |
|
Activities
Oral presentation
Presentation title | Event name Host (Event location) |
|
---|---|---|
2023/06/22 | Single cell analysis of the spinal cord reveals a persistent, injury-induced neuronal cell state | 3rd International Meeting of the Portuguese Research Network on Spinal Cord Injury
Centro de Reabilitação do Norte Dr Ferreira Alves (Vila Nova de Gaia, Portugal)
|
2023/03/03 | A Single-cell Atlas of the Mouse Spinal Cord during the Acute and Chronic Injury Response Phases | Building Bridges in Biology Symposium
Instituto Gulbenkian de Ciência (Oeiras, Portugal)
|
2021/02/17 | Basal and IL-7-dependent transcriptomics of healthy and malignant T-cells | Computational Biology and Bioinformatics Seminar
Instituto de Medicina Molecular (Portugal)
|
2020/10/21 | Basal and IL-7-dependent transcriptomics of healthy and malignant T-cells | Bioinformatics Matters Day 2020
iMM Computational Biology and Bioinformatics (Portugal)
|
2018/12 | IL-7 Activates a STAT5/PIM1 Axis to Promote T-Cell Acute Lymphoblastic Leukemia Proliferation and Viability in a Bcl-2-Independent Manner | 60th American Society of Hematology Annual Meeting and Exposition
American Society of Hematology (San Diego, United States)
|
2018/09 | IL-7 Activates a STAT5/PIM1 Axis to Promote T-Cell Acute Lymphoblastic Leukemia Proliferation and Viability in a Bcl-2-Independent Manner | SINAL 2018 - 9th Meeting on Signal Transduction
SINAL (Lisboa, Portugal)
|
2014/11 | Flexible IL-7-mediated regulation of autophagy promotes T-cell acute lymphoblastic leukemia cell viability | 1st ASPIC International Congress
Associação Portuguesa de Investigação em Cancro (Lisboa, Portugal)
|
Supervision
Thesis Title Role |
Degree Subject (Type) Institution / Organization |
|
---|---|---|
2020/01/01 - 2021/02/25 | The impact of IL-7 on metabolic reprogramming in acute lymphoblastic leukemia
Co-supervisor
|
Instituto de Medicina Molecular, Portugal
Fachhochschule Campus Wien Department Applied Life Sciences, Austria |
Event organisation
Event name Type of event (Role) |
Institution / Organization | |
---|---|---|
2017/09/29 - 2017/09/29 | Noite Europeia dos Investigadores 2017 /
European Researchers Night 2017 (2017/09/29 - 2017/09/29)
Exhibition (Member of the Organising Committee)
|
Instituto de Medicina Molecular, Portugal |
2016/09/30 - 2016/09/30 | Noite Europeia dos Investigadores 2016 /
European Researchers Night 2016 (2016/09/30 - 2016/09/30)
Exhibition (Member of the Organising Committee)
|
Instituto de Medicina Molecular, Portugal |
Event participation
Activity description Type of event |
Event name Institution / Organization |
|
---|---|---|
2023/10/12 - 2023/10/13 | Participation in the event 13th EMBO Young Scientists’ Forum
Symposium
|
13th EMBO Young Scientists’ Forum
Instituto de Medicina Molecular, Portugal
|
2023/06/22 - 2023/06/23 | Participation in the event 3rd International Meeting of the Portuguese Research Network on Spinal Cord Injury
Conference
|
Centro de Reabilitação do Norte Dr Ferreira Alves, Portugal
|
2022/06/13 - 2022/06/14 | Participation in the event 2nd International Meeting of the Portuguese Research Network on Spinal Cord Injury
Conference
|
2nd International Meeting of the Portuguese Research Network on Spinal Cord Injury
Universidade do Porto Faculdade de Medicina, Portugal
|
2021/10/12 - 2021/10/13 | Participation in the webinar “Webinar Single Cell / Spatial Trasncriptomics”, about single cell techniques and spacial transcriptomics.
Symposium
|
Webinar Single Cell / Spatial Trasncriptomics
ILC – Instrumentos de Laboratório e Científicos, Portugal
10X Genomics, United States |
2020/10/21 - 2020/10/21 | Bioinformatics Matters Day 2020
Symposium
|
Bioinformatics Matters Day 2020
Instituto de Medicina Molecular, Portugal
|
2019/12/17 - 2019/12/19 | 6th International Society of Cancer Metabolism Meeting.
Meeting
|
6th International Society of Cancer Metabolism Meeting
Universidade do Minho, Portugal
|
2018/12/01 - 2018/12/04 | 60th American Society of Hematology Annual Meeting and Exposition
Congress
|
60th American Society of Hematology Annual Meeting and Exposition
American Society of Hematology, United States
|
2018/09/22 - 2018/09/23 | 9th Meeting on Signal Transduction
Meeting
|
SINAL 2018 - 9th Meeting on Signal Transduction |
2018/07/23 - 2018/07/27 | PPB18 - Programming in Python for Biologists
Workshop
|
PPB18 - Programming in Python for Biologists
Instituto Gulbenkian de Ciência, Portugal
|
2017/09/20 - 2017/09/22 | IO17 - Large-scale bioinformatics for Immuno-Oncology |
Instituto Gulbenkian de Ciência, Portugal
|
2017/06/22 - 2017/06/25 | 22nd Congress of European Hematology Association
Congress
|
European Hematology Association, Netherlands
|
2017/06/01 - 2017/06/02 | 8th Meeting on Signal Transduction
Meeting
|
SINAL 2017 - 8th Meeting on Signal Transduction |
2017/03/17 - 2017/03/19 | T-ALL 2017 Workshop
Workshop
|
T-ALL 2017 Workshop
Vlaams Instituut voor Biotechnologie KU Leuven Center for Cancer Biology, Belgium
|
2016/04/28 - 2016/04/29 | 2nd ASPIC International Congress
Congress
|
2nd ASPIC International Congress
Instituto Português de Oncologia do Porto Francisco Gentil EPE, Portugal
|
2015/06/11 - 2015/06/14 | 20th Congress of European Hematology Association | 20th Congress of European Hematology Association
European Hematology Association, Netherlands
|
2014/11/25 - 2014/11/25 | 1st ASPIC International Congress
Congress
|
1st ASPIC International Congress
Associação Portuguesa de Investigação em Cancro, Portugal
|
2013/09/18 - 2013/09/20 | 3rd Global Cancer Genomics Consortium Symposium
Symposium
|
3rd Global Cancer Genomics Consortium Symposium
Cancer Genomics Consortium, United States
|
2013/03/22 - 2013/03/24 | Second ESH-EHA Scientific Workshop on T-Cell Acute Lymphoblastic Leukemia
Workshop
|
Fifth International Conference on Optical and Photonics Engineering
European School of Haematology, France
European Hematology Association, Netherlands |
2012/12/08 - 2012/12/11 | 54th American Society of Hematology Annual Meeting and Exposition
Congress
|
54th American Society of Hematology Annual Meeting and Exposition
American Society of Hematology, United States
|
2012/11/25 - 2012/11/27 | XXXVIII SPI Annual Meeting - From Immune Disorders to Immunotherapies
Meeting
|
XXXVIII SPI Annual Meeting - From Immune Disorders to Immunotherapies
Sociedade Portuguesa de Imunologia, Portugal
|
2012/10/29 - 2012/10/29 | A One Day Symposium with Carlos Caldas sponsored by EACR
Symposium
|
Associação Portuguesa de Investigação em Cancro, Portugal
European Association For Cancer Research, United Kingdom |
2012/04/13 - 2012/04/14 | SINAL 2012 – 6th National Meeting on Signal Transduction
Meeting
|
SINAL 2012 – 6th National Meeting on Signal Transduction |
2011/10/14 - 2011/10/14 | Thymus@Porto 2011
Workshop
|
Thymus@Porto 2011
Universidade do Porto Instituto de Biologia Molecular e Celular, Portugal
|
2011/04/28 - 2011/04/30 | SINAL 2011 – 5th National Meeting on Signal Transduction | SINAL 2011 – 5th National Meeting on Signal Transduction |
2011/03/28 - 2011/04/01 | Theorectical Couse “Laboratory Animal Science” (according to FELASA cat. B)
Workshop
|
Instituto de Medicina Molecular, Portugal
|
2010/05/21 - 2010/05/22 | SINAL 2010 – 4th National Meeting on Signal Transduction
Meeting
|
SINAL 2010 – 4th National Meeting on Signal Transduction |
2010/02/03 - 2010/02/06 | Practical Course “Lab Animal Science @ the IMM – Working with Rodents and Fish”
Workshop
|
Practical Course “Lab Animal Science @ the IMM – Working with Rodents and Fish”
Instituto de Medicina Molecular, Portugal
|
2009/05/29 - 2009/05/30 | SINAL 2009 – 3rd National Meeting on Signal Transduction
Meeting
|
SINAL 2009 – 3rd National Meeting on Signal Transduction |
Jury of academic degree
Topic Role |
Candidate name (Type of degree) Institution / Organization |
|
---|---|---|
2021/07/16 | Regulatory T Cells Expressing FOXP3 and low CD25 in Common Variable Immunodeficiency - Unsupervised Analysis of a Flow Cytometry
Study
(Thesis) Main arguer
|
Carolina Marques Martins (Master)
Universidade de Lisboa Faculdade de Medicina, Portugal
|
Ad Hoc journal article review
Journal title (ISSN) | Publisher | |
---|---|---|
2023 - 2023 | Cells (2073-4409) |
Association member
Society Organization name | Role | |
---|---|---|
2022 - 2023 | IMM's Posdoc Association | Volunter |
Mentoring / Tutoring
Topic | Student name | |
---|---|---|
2024/01/01 - Current | Dissecting the astrocyte and immune cell networks in spinal cord injury with single-cell RNA-seq | Vasco Lucas |
2021/11/01 - 2022/02/14 | High-throughput RNA sequencing data analysis of metabolism-associated genes and pathways participating in spinal cord regeneration in zebrafish | Afonso Assis |
2017 - 2018 | The impact of IL-7 on metabolic reprogramming in acute lymphoblastic leukemia | Gonçalo L. M. Pereira |
2012 - 2013 | Dissecting the signaling mechanisms of IL-7-mediated autophagy regulation in T-cell acute lymphoblastic leukemia | Maria Inês F. Lopes |
2011 - 2012 | Does IL-7 Regulate Autophagy of Acute Lymphoblastic Leukemia T-Cells? | Marta C. Abreu |
Distinctions
Award
2012 | Sociedade Portuguesa de Imunologia (SPI) Best Paper Award
Sociedade Portuguesa de Imunologia, Portugal
|
Other distinction
2018 | TwinToInfect – Travel grant
Instituto de Medicina Molecular, Portugal
|
2017 | European Hematology Association – Travel grant
European Hematology Association, Netherlands
|
2012 | Sociedade Portuguesa de Imunologia - Travel grant
Sociedade Portuguesa de Imunologia, Portugal
|