Identification
Personal identification
- Full name
- Filipe José Oliveira Costa
Citation names
- Costa, Filipe
- Filipe O. Costa
- Filipe Oliveira Costa
Author identifiers
- Ciência ID
- 7318-9608-6D8C
- ORCID iD
- 0000-0001-5398-3942
- Google Scholar ID
- https://scholar.google.com/citations?hl=en&user=HEjsbcIAAAAJ
- Researcher Id
- B-5890-2009
- Scopus Author Id
- 7201976261
Websites
- https://cbma.uminho.pt/people-detail/?userid=28 (Professional)
- https://www.researchgate.net/profile/Filipe_Costa5 (Social media)
- https://me-barcode.weebly.com (Professional)
Knowledge fields
- Natural sciences - Biological Sciences - Marine Biology
Education
Degree | Classification | |
---|---|---|
1998 - 2002
Concluded
|
PhD (Doutoramento)
Major in Ciências do Ambiente
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
"Integrated research on ecology, genetics and ecotoxicology of Gammarus locusta (L.): the model organism approach" (THESIS/DISSERTATION)
|
Unanimous approval |
1997
Concluded
|
Ecologia, Gestão e Modelação de Recursos Marinhos (Mestrado)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
"Gammarus locusta (L.) (Crustacea) in ecotoxicological testing: ecology, laboratory culturing and sensitivity to non-contaminant
variables." (THESIS/DISSERTATION)
|
Muito Bom / Very good |
1993
Concluded
|
Biologia Marinha e Pescas (Licenciatura)
Universidade do Algarve, Portugal
"Screening of oestrogenicity of xenobiotics based in competition studies for oestradiol receptor of rainbow trout Oncorhynchus
mykiss" (THESIS/DISSERTATION)
|
Bom / Good |
Affiliation
Teaching in Higher Education
Category Host institution |
Employer | |
---|---|---|
2019/05 - Current | Associate Professor (University Teacher) | Universidade do Minho, Portugal |
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal | ||
2008/01/02 - 2019 | Assistant Professor (University Teacher) | Universidade do Minho, Portugal |
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
Positions / Appointments
Category Host institution |
Employer | |
---|---|---|
2016/09/01 - 2018/09/01 | Director of the Applied Biology degree | Universidade do Minho, Portugal |
Universidade do Minho, Portugal |
Others
Category Host institution |
Employer | |
---|---|---|
2006/01/01 - 2007/12/31 | Marie Curie Fellow / Senior Research Fellow | Bangor University, United Kingdom |
2003/09/22 - 2004/12/15 | Postdoctoral Researcher | University of Guelph, Canada |
2003/02/01 - 2003/08/31 | Postdoctoral Researcher | Texas Tech University, United States |
2000/05/01 - 2000/08/31 | Visiting PhD student | Texas A&M University Department of Biology, United States |
1999/05/01 - 1999/06/30 | Visiting PhD student | Texas A&M University Department of Biology, United States |
Projects
Grant
Designation | Funders | |
---|---|---|
2021/04 - Current | Exploring the use of environmental DNA to monitor the ichthyofauna and provide data to assist fish stock assessment in the
Atlantic
UMINHO/BID/2021/36
Supervisor
Universidade do Minho Departamento de Biologia, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/12/01 - Current | Meta-species screening for genetic divergence and phylogeographic reconstruction in Atlantic marine fish species
UI/BD/1509102021
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/10/01 - Current | DNA-based monitoring of ichthyoplankton for application to fish biodiversity conservation and fisheries management
DFA/BD/6653/2020
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/10/01 - Current | Optimization of DNA metabarcoding for the early detection and improved monitoring of non-indigenous species (NIS) in Portuguese
coastal ecosystems
UI/BD/150871/2021
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia |
2017/10/01 - 2022/09/06 | Phyllodocida (Annelida, Polychaeta) of the North East Atlantic as model for the investigation of cryptic species
SFRH/BD/131527/2017
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2017 - 2021 | Development of a metabarcoding approach for investigating the coupled dynamics of estuarine meio - and macrobenthic communities
PD/BD/113547/2015
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2016 - 2020 | Monitoring coastal benthic colonization of artificial substrates with the support of DNA metabarcoding approaches
PD/BD/127994/2016
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2016 - 2019 | Metabarcoding of meio- and macrobenthic estuarine communities: performance assessment and implementation in monitoring programmes
SFRH/BPD/109842/2015
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2013/10/01 - 2018 | GENOMIC PHYLOGEOGRAPHY AND DEMOGRAPHIC HISTORY OF THE IBERIAN HONEYBEE (APIS MELLIFERA IBERIENSIS)
SFRH/BD/841952/2012/PT
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2013/03/01 - 2018 | ASSOCIATIONS BETWEEN GENETIC AND COMMUNITY DIVERSITY IN NORTHEAST ATLANTIC ROCKY SHORE ENVIRONMENTS: THE CASE OF THE PERACARIDS
SFRH/BD/865362/2012
Supervisor
Universidade de Aveiro, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/10/01 - 2016 | POPULATION GENOMICS AND LANDSCAPE GENETICS OF THE IBERIAN HONEY BEE (APIS MELLIFERA IBERIENSIS)
FCT/SFRH/BD/686822/2010/PT
Supervisor
Universidade do Minho, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/10/01 - 2016 | MOLECULAR BIODIVERSITY AND ADVANCED MONITORING TOOLS FOR MACROBENTHIC COMMUNITIES OF PORTUGUESE COASTAL ECOSYSTEMS
SFRH/BD/69750/2010/PT
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/03/01 - 2015 | PHYLOGENY, PHYLOGEOGRAPHY AND ONTOGENY OF THE WORLDWIDE DISTRIBUTED SHRIMP GENUS PLESIONIKA: CONTRASTING MOLECULAR AND MORPHOLOGY-BASED
APPROACHES
SFRH/BPD/63888/2009/PT
Supervisor
Instituto Português do Mar e da Atmosfera, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2009/01/01 - 2015 | MOLECULAR BIODIVERSITY AND META-SPECIES PHYLOGEOGRAPHY OF FISH FROM THE NE ATLANTIC AND MEDITERRANEAN
SFRH/BPD/45246/2008/PT
Supervisor
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2007/07/01 - 2013 | BIODIVERSITY AND EVOLUTION OF BROWN SEAWEEDS FROM PORTUGUESE WATERS AND ADJACENT OCEANOGRAPHIC REGIONS
SFRH/BPD/34246/2006/PT
Supervisor
Universidade dos Açores, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2006/01/01 - 2012 | BIODIVERSIDADE E EVOLUÇÃO MOLECULAR DE CRUSTÁCEOS EM ECOSSISTEMAS BATIAIS DA MARGEM PORTUGUESA
SFRH/BD/25568/2005/PT
Supervisor
Universidade de Aveiro, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2006 - 2007 | EUROFISHCODE - DNA barcodes for species identification of Fish and Shellfish in Europe: implementation and application in
selected case-studies
Researcher
Bangor University, United Kingdom
|
European Commission
Concluded
|
2003 - 2005 | Development of methodologies for monitoring genotoxicity and genotypic diversity in ecosystems of the Portuguese coast
SFRH/BPD/11588/2002
Post-doc Fellow
Instituto do Mar, Portugal
University of Guelph, Canada Texas Tech University, United States |
Fundação para a Ciência e a Tecnologia
Concluded
|
Contract
Designation | Funders | |
---|---|---|
2023/06/01 - Current | eDNAqua-plan: A Plan towards an eDNA reference library and data repository for Aquatic Organisms, navigating Europe towards
the next generation biodiversity monitoring
HORIZON-MISS-2022-OCEAN-01ID101112800
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Horizon 2020
Ongoing
|
2023/01/02 - Current | Blue Bioeconomy Innovation Pact - Vertical Fish
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Agência para a Competitividade e Inovação IP
Ongoing
|
2023/01/01 - Current | Blue Bioeconomy Innovation Pact - Vertical Algae
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Agência para a Competitividade e Inovação IP
Ongoing
|
2019/06/16 - Current | BIOSCAN- Revealing species, their interactions and dynamics
Researcher
University of Guelph, Canada
|
Natural Sciences and Engineering Research Council of Canada
Ongoing
|
2019 - Current | Integrative approach to adaptive radiation in ancient lakes - a case study of Lake Ohrid Gammarus species flock
018/31/B/NZ8/03103
Researcher
Uniwersytet Lódzki, Poland
|
Narodowe Centrum Nauki |
2021/01/01 - 2025/12/31 | Aquatic Research Infrastructure Network
LA/P/0069/2020
Researcher
Universidade de Évora, Portugal
Centro de Ciências do Mar e do Ambiente, Portugal Universidade NOVA de Lisboa, Portugal FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal Instituto Universitário de Ciências Psicológicas Sociais e da Vida, Portugal Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal Instituto Politécnico de Leiria, Portugal Universidade do Minho, Portugal Universidade do Algarve, Portugal Universidade de Coimbra, Portugal Universidade de Lisboa Faculdade de Ciências, Portugal Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação, Portugal Associação para a Inovação e Desenvolvimento da FCT, Portugal Centro de Investigação Marinha e Ambiental, Portugal |
Fundação para a Ciência e a Tecnologia
Ongoing
|
2022 - 2025/01/19 | FISH-DNA-MONITOR: Supporting monitoring and management of fisheries resources in Guinea-Bissau through capacity-building on
cutting-edge DNA- based approaches
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Aga Khan Development Network Fundação para a Ciência e a Tecnologia Ongoing
|
2020/08/24 - 2024/04/23 | A-FISH-DNA-SCAN: Cutting-edge DNA-based approaches for improved monitoring and management of fisheries resources along Magellan-Elcano´s
Atlantic route
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal Instituto Português do Mar e da Atmosfera, Portugal Universidade de Coimbra Centro de Neurociências e Biologia Celular, Portugal Centro de Ciências do Mar, Portugal |
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/10/01 - 2023/09/30 | ATLANTIDA - Platform for the monitoring of the North Atlantic ocean and tools for the sustainable exploitation of the marine
resources
Researcher
Universidade do Minho, Portugal
|
Comissao de Coordenacao e Desenvolvimento Regional do Norte
Concluded
|
2021/10/15 - 2023/06/30 | River2Ocean: Socio-ecological and biotechnological solutions for the conservation and valorisation of aquatic biodiversity
in the Minho Region
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Comissao de Coordenacao e Desenvolvimento Regional do Norte
Concluded
|
2020/04/01 - 2023/06/30 | K2D: Knowledge and Data from the Deep to Space
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2018/10/01 - 2021/09/30 | NIS-DNA: Early detection and monitoring of non-indigenous species (NIS) in coastal ecosystems based on high-throughput sequencing
tools
Researcher
Universidade do Minho, Portugal
Fundação Gaspar Frutuoso, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2017 - 2020 | (NEXT-SEA) Next generation monitoring of coastal ecosystems in a scenario of global change
Researcher
Comissao de Coordenacao e Desenvolvimento Regional do Norte, Portugal
|
Concluded
|
2016/04 - 2020 | DNAqua-Net: Developing new genetic tools for bio-assessment of aquatic ecosystems in Europe
Researcher
Universität Duisburg-Essen, Germany
|
European Cooperation in Science and Technology
Concluded
|
2019/01/01 - 2019/12/31 | CENTRO DE BIOLOGIA MOLECULAR E AMBIENTAL
UID/BIA/04050/2019
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2012/03/15 - 2015/09/14 | NANOECOTOX-Impacts of metal nanoparticles to aquatic ecosystems: from community responses to cellular targets
PTDC/AAC-AMB/121650/2010
Researcher
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal Universidade do Algarve, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/04/04 - 2014/10/02 | Benthic Estuarine Barcode (BEstBarcode): Development and application of massively paralelized sequencing for monitoring of
estuarine macrobenthic communities
PTDC/MAR/113435/2009
Principal investigator
Universidade do Minho, Portugal
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/04/01 - 2014/09/30 | DiverseShores - Testing associations between genetic and community diversity in European rocky shore environments
PTDC/BIA-BIC/114526/2009
Researcher
Universidade de Aveiro, Portugal
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2011/01/01 - 2013/12/31 | Projecto Estratégico - UI 4050 - 2011-2012
PEst-C/BIA/UI4050/2011
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
Universidade do Minho, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/03/22 - 2013/09/30 | Patterns and processes of (neutral and adaptive) variation in the honey bee (Apis mellifera iberiensis) hybrid zone of the
Iberian Peninsula: a population genetics approach integrating population genomics and landscape genetics
PTDC/BIA-BEC/099640/2008
Researcher
Instituto Politécnico de Bragança, Portugal
Centro de Investigação de Montanha, Portugal Universidade do Minho, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/03/17 - 2013/09/15 | METAFISHCODE: Fish genetic diversity and meta-species phylogeography at global and regional scales: implications for fisheries
management
PTDC/MAR/101795/2008
Principal investigator
Universidade do Minho, Portugal
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal Instituto Português do Mar e da Atmosfera, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2008/11/01 - 2012/04/30 | LusoMarBoL: Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and
investigating phylogeographic patterns
PTDC/MAR/69892/2006
Principal investigator
Universidade do Minho, Portugal
Universidade de Aveiro, Portugal Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal Universidade dos Açores, Portugal Instituto Português do Mar e da Atmosfera, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2008/11/01 - 2012/04/30 | Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and investigating
phylogeographic patterns
PTDC/MAR/69892/2006
Universidade do Minho, Portugal
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal Instituto Português do Mar e da Atmosfera, Portugal Universidade de Aveiro, Portugal Universidade dos Açores, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2008 - 2011 | LusoAquaBarcode: Implementing DNA barcoding into aquatic biodiversity research in Portugal and priming new macrobenthos monitoring
tools
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
European Commission |
2002/04/01 - 2005/12/31 | Integration of molecular and physiological responses to contamination. Applicability to coastal environment's biomonitoring.
POCTI/BSE/41967/2001
PhD Student Fellow
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2000/01/01 - 2003/12/31 | Genetic characterization and genetic ecotoxicology of a marine amphipod
POCTI/BIA/10225/2002
PhD Student Fellow
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
1998/03/01 - 2002/02/28 | DOS ORGANISMOS ÀS POPULAÇÕES: TESTES DE TOXICIDADE SEDIMENTAR VERSUS POPULAÇÕES NATURAIS. UTILIZAÇÃO DE ANFÍPODES ESTUARINOS
PRAXIS XXI/BD/11575/97
PhD Student Fellow
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
1994/10/01 - 1996/09/30 | GAMMARUS LOCUSTA ANPHIPODA COMO ORGANISMO TESTE EM ENSAIOS DE TOXICIDADE DE COBRE. METODOLOGIAS PARA MANUTENÇÃO DA ESPÉCIE
EM LABORATÁRIO
PRAXIS XXI/BM/2390/94
Universidade de Lisboa Faculdade de Ciências, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
Other
Designation | Funders | |
---|---|---|
2022/09/09 - Current | DNA-based approaches for fisheries monitoring
Principal investigator
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
Ongoing
|
Outputs
Publications
Book chapter |
|
Conference paper |
|
Edited book |
|
Journal article |
|
Activities
Oral presentation
Presentation title | Event name Host (Event location) |
|
---|---|---|
2023/07/19 | Overview of (e)DNA (meta)barcoding and BIOSCAN / BIOSCAN-Europe | Biodiversa+ Workshops on Monitoring Non-Indigenous Species Through Introduction sites
Central Fisheries Research Institute (Yomra, Trabzon, Turkey)
|
2023/07/12 | DNA barcodes in the discovery and monitoring of marine biodiversity | ATLANTIDA - Platform for the monitoring of the North Atlantic Ocean and tools for the sustainable exploitation of the marine
resources – Final event
CIIMAR (Matosinhos, Portugal)
|
2023/07/07 | Usefulness and potential of (e)DNA (meta)barcoding in marine biodiversity monitoring and management | Encontro Ciência 2023 da Fundação para a Ciência e Tecnologia (FCT)
Universidade de Aveiro (Aveiro, Portugal)
|
2023/06/30 | Challenges for sampling eDNA from open ocean, deep sea and the seabed. | K2D- Knowledge from deep to space- final event
DSTelecom (Braga, Portugal)
|
2022/12/16 | Insights into biodiversity and evolution after 20 years of DNA barcoding, with a focus on marine life | XVIII Encontro Nacional de Biologia Evolutiva (ENBE)
University of Minho (Braga, Portugal)
|
2022/06/09 | XI Brazilian Crustacean Congress / The Crustacean Society Summer (TCS) meeting / Amphipoda Symposium (online event) | New DNA barcoding-driven perspectives on the diversity and evolution of marine Peracarida (Crustacea): the case of the Macaronesia’s
hotspot
Universidade Estadual Paulista (UNESP) (São Paulo, Brazil)
|
2021/03/09 | Venturing into auditing of reference libraries: from the hackathon on marine invertebrates to sorting with BAGS | First DNAQUA International Conference
Costa Action DNAqua-Net / INRAE, Carrtel, France, Online Event (Carrtel, France)
|
2018/07 | Aquatic macroinvertebrates diversity and evolution: some novel perspectives after 15 years of DNA barcoding | 3rd Central European Symposium for Aquatic Macroinvertebrate Research (3rd CESAMIR)
University of Lodz (Lodz, Poland)
|
2017/01 | Appraisal and prospects of DNA barcoding marine life of Portugal: from Sanger to high-throughput sequencing. | CIIMAR Oceanus Seminar Series
CIIMAR - Interdisciplinary Centre of Marine and Environmental Research (Porto, Portugal)
|
2012 | The contribution of DNA barcoding to marine life taxonomy. | First Iberian Meeting on Marine Taxonomy
University of Seville (Seville, Spain)
|
2012 | Introduction to DNA barcoding. | Workshop in Marine DNA barcoding
Universidade dos Açores (Ponta Delgada, Portugal)
|
Supervision
Thesis Title Role |
Degree Subject (Type) Institution / Organization |
|
---|---|---|
2023/01/01 - 2023/09/30 | ATLANTIDA: Platform for the monitoring of the North Atlantic Ocean and tools for the sustainable exploitation of marine resources
Supervisor of Luara Aparecida Simões
|
Post-doctoral fellow (Other)
Universidade do Minho, Portugal
|
2023 - 2023 | DNA metabarcoding monitoring of zooplankton for the detection of non-indigenous species (NIS): a seasonal study in a recreational
marina of the northwest of Portugal
Co-supervisor
|
Biodiversidade, Ecologia e Alterações Globais (Master)
Universidade do Minho, Portugal
|
2019 - 2022/09/06 | Phyllodocida (Annelida, Polychaeta) of the North East Atlantic as a model for the investigation of cryptic species
Supervisor
|
Ciência, Tecnologia e Gestão do Mar (PhD)
Universidade do Minho, Portugal
|
2022 - 2022 | DNA metabarcoding for the early detection and improved monitoring of non-indigenous species (NIS) in Portuguese coastal ecosystems
Co-supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2022 - 2022 | Potential of Atlantic codfish (Gadus morhua) skin collagen and derivatives on skincare
Co-supervisor
|
Bioquímica Aplicada (Master)
Universidade do Minho, Portugal
|
2022 - 2022 | Otimização de ferramentas moleculares para a monitorização de espécies não indígenas em regiões costeiras do Norte de Portugal
Co-supervisor
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2017 - 2021/03/31 | Monitoring coastal benthic colonization of artificial substrates with the support of DNA metabarcoding approaches
Supervisor
|
Ciência, Tecnologia e Gestão do Mar (PhD)
Universidade do Minho, Portugal
|
2021 - 2021 | Exploring the use of environmental DNA to monitor the ichthyofauna and provide data to assist fish stock assessment in the
Atlantic
Supervisor
|
Biologia (PhD)
Universidade do Minho, Portugal
|
2021 - 2021 | DNA-based monitoring of ichthyoplankton for application to fish biodiversity conservation and fisheries management
Supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2021 - 2021 | Meta-species screening for genetic divergence and phylogeographic reconstruction in Atlantic Marine fish species
Supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2019/11 - 2020/07 | Ecological network analyses of marine communities from Portuguese coastal ecosystems, with particular focus on data derived
from high-throughput sequencing
Supervisor
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2020 - 2020 | Improving auditing and annotation of DNA barcode reference libraries of animal COI sequences for Molecular Ecology applications
Supervisor
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2018 - 2019 | DNA barcoding of the genus Laeonereis (Phyllodocida: Nereididae): a recent approach for an old impasse
Supervisor of Bruno Rodrigues Sampieri
|
Post-doctoral fellow supported by FAPESP, São Paulo, Brazil (Other) |
2016 - 2019 | Metabarcoding of meio- and macrobenthic estuarine communities: performance assessment and implementation in monitoring programmes
Supervisor of Sofia Alexandra Ferreira Duarte
|
Post-Doctoral Fellowship SFRH/BPD/109842/2015 (Other)
Universidade do Minho, Portugal
|
2017 - 2017 | Development of metabarcoding approaches for investigating temporal and spatial dynamics of meiobenthic communities in estuarine
ecosystem
Supervisor
|
Ciência, Tecnologia e Gestão do Mar (PhD)
Universidade do Minho, Portugal
|
2012 - 2017 | Biodiversity and evolution of the coastal peracaridean fauna of Macaronesia and Northeast Atlantic
Co-supervisor of Pedro Emanuel Ferreira dos Reis Vieira
|
Universidade de Aveiro, Portugal
|
2016 - 2016 | Employment of whole genome resequencing to reveal the evolutionary history and to develop molecular tools for Western European
honey bees (Apis mellifera subspecies)
Co-supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2016 - 2016 | Molecular biodiversity and advanced monitoring tools for macrobenthic communities of Portuguese coastal ecosystems
Supervisor
|
Biologia Molecular e Ambiental (PhD)
Universidade do Minho, Portugal
|
2015 - 2016 | Biblioteca de referência de DNA barcodes de anfípodes (Crustacea: Amphipoda) da costa Portuguesa
Supervisor of Ilisa Daniela Costa Antunes
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2014 - 2016 | Development of a biomonitoring tool for estuarine macrobenthic communities based on DNA barcodes and next generation sequencing
Supervisor of Claudia Hollatz
|
Pós-Doctoral fellow supported by the programme "Ciência sem Fronteiras (Capes, Brasil)" (Other)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2014 - 2015 | DNA barcodes de peixes marinhos da Europa: compilação de uma biblioteca de referência validada e investigação de padrões de
divergência genética
Supervisor of Luís Manuel Coelho Oliveira
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2014 - 2015 | Biblioteca de referência de DNA barcodes de bivalves (Mollusca: Bivalvia) e gastrópodes (Mollusca: Gastropoda) da costa Portuguesa.
Supervisor of Ana Paula Peixoto Vilela
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2014 - 2015 | Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities
Supervisor of Bárbara Daniela da Rocha Leite
|
Genética Molecular (Master)
Universidade do Minho, Portugal
|
2011 - 2015 | Population genomics and landscape genetics of the Iberian honey bee (Apis mellifera iberiensis)
Co-supervisor of Julio César Chávez Galarza
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2013 - 2014 | Construção de uma biblioteca de referência de DNA barcodes para Isópodes marinhos (Crustacea: Isopoda) de Portugal e da Macaronésia
Supervisor of Nuno Miguel Araújo Gomes
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2012 - 2013 | Compilação de uma bibliografia de referência de DNA barcodes para peixes marinhos de Portugal e estudo filogeográfico da espécie
Zeus faber
Supervisor of Cláudia Soraia Lopes Castro
|
Ecologia (Master)
Universidade do Minho, Portugal
|
2009/01 - 2012/04 | Integrating molecular approaches into marine biodiversity research in Portugal: implementing DNA barcoding and investigating
phylogeographic patterns
Supervisor of Luísa Maria Sousa Borges
|
Post-doctoral fellow in the scope of the FCT funded project "LusoMarBoL" PTDC/MAR/69892/2006 (Other)
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal
|
2006 - 2012 | Biodiversity and molecular evolution of Malacostraca
Co-supervisor of Joana Rafael Matzen Neves Da Silva
|
Universidade de Aveiro, Portugal
|
Event organisation
Event name Type of event (Role) |
Institution / Organization | |
---|---|---|
2023/10/19 - 2023/10/20 | IV International Meeting of the Portuguese Society of Genetics, October 19-20, Braga, Portugal. (2023)
Conference (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2022/12/15 - 2022/12/16 | XVIII Encontro Nacional de Biologia Evolutiva (ENBE), December 15-16, 2022, Braga, Portugal. (2022/12/15 - 2022/12/16)
Conference (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2019/09 - 2019/09 | XXth SIEBM: 20th Iberian Symposium on Marine Biology Studies
(2019/09 - 2019/09)
Conference (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2019 - 2019 | Workshop "Hackathon on revision of reference libraries of Marine Invertebrates": co-Coordinator (2019/06/16 - 2019/06/16)
Workshop (Co-organisor)
|
Norges teknisk-naturvitenskapelige universitet, Norway |
2019 - 2019 | Mini-workshop on Barcode of Life Datasystems (BOLD) (2019 - 2019)
Workshop (Member of the Organising Committee)
|
Université Bourgogne Franche-Comté, France |
2018/01/24 - 2018/01/26 | DNAqua-Net workshop: Gap analyses workshop and WG1 meeting of the COST Action DNAqua-Net ref. CA 15219 (2018/01/24 - 2018/01/26)
Workshop (President of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2016 - 2016 | 32nd Symposium of the European Society of Nematologists (2016 - 2016)
Symposium (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2015/09 - 2015/09 | 16th ICA: 16th International Colloquium on Amphipoda
(2015/09/07 - 2015/09/11)
Conference (President of the Organising Committee)
|
Universidade de Aveiro Centro de Estudos do Ambiente e do Mar, Portugal Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2012 - 2012 | NGS in Marine Genomics: Current challenges and future directions. (2012/09 - 2012/09)
Symposium (Co-organisor)
|
Universidade de Vigo, Spain |
2012 - 2012 | XVIth Congress of the Iberian Society of Limnology. (2012 - 2012)
Congress (Member of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2010/06/02 - 2010/06/04 | ECBOL2: 2nd Conference of the European Consortium for the Barcode of Life: 2010 International Year of Biodiversity (2010/06/02 - 2010/06/04)
Conference (President of the Organising Committee)
|
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal |
2008 - 2008 | FISH-BOL workshop: 1st Workshop of the European Regional Working Group of the Fish Barcode of Life Initiative. (2008 - 2008)
Workshop (Co-organisor)
|
Università degli Studi di Palermo, Italy |
Jury of academic degree
Topic Role |
Candidate name (Type of degree) Institution / Organization |
|
---|---|---|
2022/06/09 | Phyllodocida (Annelida, Polychaeta) ofthe North East Atlantic as a model forthe investigation of cryptic species
Supervisor
|
Marcos André Machado Lima Teixeira (PhD)
Universidade do Minho, Portugal
|
2020/12/07 | VAGILE FOULING: BIOGEOGRAPHY AND COMMUNITY DRIVERS OF AN UNDERSTUDIED COMMUNITY OF OVERLOOKED TAXA
(Thesis) Main arguer
|
Andrea Desiderato (PhD)
Universidade Federal do Paraná, Brazil
|
2020/11/23 | Impacts of the invasive species corbicula fluminea on freswater mussels
(Thesis) Arguer
|
Ana Vanessa Pinto Modesto Bento (PhD)
Universidade do Minho, Portugal
|
2020 | Under the surface: combining ecological and evolutionary analysis to conserve freshwater mussels in the Iberian Peninsula
(Thesis) Main arguer
|
Manuel Peixoto de Magalhães Lopes Lima (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
|
2018/04/12 | Sistemática molecular e historia evolutiva de peces marinos de profundidad del Océano Atlántico y del Mar Mediterráneo
(Thesis) Main arguer
|
David Barros Garcia (PhD)
Universidade de Vigo, Spain
|
2017/10/31 | Biodiversity and evolution of the coastal peracaridean fauna from Macaronesia and Northeast Atlantic
Supervisor
|
Pedro Emanuel Ferreira Dos Reis Vieira (PhD)
Universidade de Aveiro, Portugal
|
2017/07 | Molecular clocks and rates of evolution in marine invertebrates
(Thesis) Main arguer
|
Tzitziki del Rosario Loeza Quintana (PhD)
University of Guelph, Canada
|
2017 | Invasive species as resource subsidies: functional importance
(Thesis) Arguer
|
Adriana Araújo Novais (PhD)
Universidade do Minho, Portugal
|
2017 | The microbiome of cetaceans as a health status marker
(Thesis) Main arguer
|
Helena Maria Araújo Rodrigues (Master)
Universidade do Minho, Portugal
|
2016 | Propagação clonal, conectividade e estrutura genética em populações de Paramuricea clavata do Atlântico e Mediterrâneo
(Thesis) Main arguer
|
Joanna Pilczynska (PhD)
Universidade de Aveiro, Portugal
|
2014 | Macrofaunal biodiversity of bathyal habitats at the Moroccan Carbonate Province (Gulf of Cadiz, NE Atlantic)
(Thesis) Main arguer
|
JOANA FILIPA MONTEIRO CASAIS (Master)
Universidade de Aveiro, Portugal
|
2013/06 | Responses of aquatic decomposers to nutrient availability in a warming scenario
(Thesis) Arguer
|
Isabel Rodrigues Fernandes (PhD)
Universidade do Minho, Portugal
|
2012 | Filogeografia das lampreias da Europa Ocidental: contributos para a compreensão dos seus padrões de especiação.
(Thesis) Main arguer
|
Ana Martins Pereira (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
|
2012 | Taxonomy, systematics, morphological and molecular phylogeny of the order tanaidacea (crustacea: peracarida), from the Antarctic,
atlantic and pacific oceans
(Thesis) Main arguer
|
Catarina de Lourdes Araújo Silva (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
|
2009 | Genetic and morphological diversity of the genus Lampetra (Petromyzontidae) in Europe
(Thesis) Main arguer
|
Catarina Sofia Pereira Mateus (PhD)
Universidade de Évora Instituto de Investigação e Formação Avançada, Portugal
|
Committee member
Activity description Role |
Institution / Organization | |
---|---|---|
2016 - Current | DNAqua-Net Portugal Delegate and Management Committee member of the COST Action "DNAqua-Net: Developing new genetic tools
for bio- assessment of aquatic ecosystems in Europe" http://dnaqua.net
Member
|
Universität Duisburg-Essen, Germany |
2008 - Current | iBOL: Portugal Delegate in the International Barcode of Life (iBOL) consortium: http://www.ibol.org
Member
|
University of Guelph, Canada |
Conference scientific committee
Conference name | Conference host | |
---|---|---|
2022/06/20 - 2022/06/23 | IX Iberian Congress of Ichthyology (SIBIC 2022) | CIIMAR, University of Porto |
2020/12/09 - 2020/12/11 | XIX Encontro Nacional de Ecologia (Sociedade Portuguesa de Ecologia – SPECO) | Instituto Politécnico de Viana do Castelo (IPVC) |
2019/08 - 2019/08 | 18th International Colloquium on Amphipoda | University of Burgundy, Dijon, France |
2019/06 - 2019/06 | 8th International Barcode of Life Conference | University of Trondheim, Trondheim, Norway |
2017 - 2017 | 17th International Colloquium on Amphipoda | University of Palermo, Trapani, Italy |
2017 - 2017 | 7th International Barcode of Life Conference | University of Johannesburg, Kruger, South Africa |
2016 - 2016 | CdM ISC’16: Campus do Mar International Scientific Conference 2016 | Universidade de Trás-os-Montes e Alto Douro (UTAD) |
2015/09 - 2015/09 | 16th International Colloquium on Amphipoda | University of Aveiro, Portugal; University of Minho, Portugal |
2015 - 2015 | 6th International Barcode of Life Conference | University of Guelph, ON, Canada |
2013 - 2013 | 15th International Colloquium on Amphipoda | University of Lodz, Poland |
Course / Discipline taught
Academic session | Degree Subject (Type) | Institution / Organization | |
---|---|---|---|
2019/10 - 2019/10 | DNA barcoding - from sequences to species / ForBio Research School on Biosystematics | ForBio Research School on Biosystematics (Postgraduate Certificate) | Norges teknisk-naturvitenskapelige universitet, Norway |
2018 - 2018 | Erasmus+ exchange Invited lecture | Erasmus+ exchange Invited lecture (Postgraduate Certificate) | Universidade de Vigo, Spain |
Journal scientific committee
Journal title (ISSN) | Publisher | |
---|---|---|
2016 - Current | Metabarcoding and Metagenomics (2534-9708) | Pensoft Publishers |
2014 - Current | Scientific Reports (2045-2322) | Springer Science and Business Media LLC |
Other jury / evaluation
Activity description | Institution / Organization | |
---|---|---|
2019 - Current | Referee for the PhD thesis of Chiara Abbatista titled "Biogeographic patterns of Mediterranean Amphipods associated with Posidonia oceanic meadows" | Università degli Studi della Tuscia, Italy |
2019 - 2020 | Referee for the PhD thesis of Luca Vecchioni titled "Systematics and phylogeography of the genus Tigriopus (Copepoda, Harpacticoida, Harpacticidae) in the basin of the Mediterranean Sea" | Università degli Studi di Palermo, Italy |
Distinctions
Award
2022 | Prize for Recognition of the Impact of Scientific Research
Universidade do Minho Escola de Ciências, Portugal
|
2020 | Prize for Scientific Research and Technological Development
Fundação para a Ciência e a Tecnologia, Portugal
|