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Francisco Oliveira has a graduation (5 years) in Mathematics from the University of Minho, a Master in Computational Methods, and a PhD in Biomedical Engineering from the University of Porto. He was awarded a four years doctoral scholarship from the prestigious Fundação Calouste Gulbenkian, in Portugal. After, he was Auxiliary Researcher at the Institute for Nuclear Sciences Applied to Health (ICNAS) from the University of Coimbra. Then, he moved to the Faculty of Medicine of the University of Coimbra, also as Auxiliary Researcher. Currently, he works at the Nuclear Medicine clinical service of the Champalimaud Foundation, in Portugal, and integrates the Nuclear Medicine-Radiopharmacology research group of the same institution. He taught Mathematics, Calculus, Algebra, Statistics, and Computer Vision to undergraduate, master, and doctoral students. He has also supervised MSc and PhD students. He has been working on many research projects funded by national organizations. He has tens of publications in top-ranking journals, being the first author in many of them. He is also an ad hoc reviewer for several top-ranking journals. His main current areas of interest are medical image processing, analysis, and quantification; PET and SPECT imaging; image reconstruction; compartmental analysis based on dynamic imaging; computer-aided diagnosis; statistics, and machine learning. He has a special interest in neuroimaging and oncology.
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Identification

Personal identification

Full name
Francisco Paulo Marques de Oliveira

Citation names

  • Oliveira, Francisco
  • Oliveira, FPM
  • Oliveira, F

Author identifiers

Ciência ID
731B-2790-2B20
ORCID iD
0000-0001-9468-8894
Google Scholar ID
https://scholar.google.pt/citations?user=ZXCHp04AAAAJ&hl=pt-PT
Researcher Id
A-5663-2013
Scopus Author Id
35332732800

Knowledge fields

  • Exact Sciences - Mathematics
  • Exact Sciences - Mathematics - Statistics and Probability
  • Exact Sciences - Mathematics - Applied Mathematics
  • Medical and Health Sciences - Health Sciences - Social Biomedical Sciences
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Engineering and Technology - Electrotechnical Engineering, Electronics and Informatics
  • Exact Sciences - Computer and Information Sciences - Computer Sciences
  • Medical and Health Sciences - Clinical Medicine - Radiology, Nuclear Medicine and Medical Imaging

Languages

Language Speaking Reading Writing Listening Peer-review
English Upper intermediate (B2) Advanced (C1) Upper intermediate (B2) Upper intermediate (B2) Upper intermediate (B2)
Portuguese (Mother tongue)
Education
Degree Classification
2012/11/20
Concluded
 Engenharia Biomédica (Doutoramento)
Major in Sem especialidade
Universidade do Porto Faculdade de Engenharia, Portugal
"Matching and Registration of Structures in Computational Vision: Applications on Medical Images" (THESIS/DISSERTATION)
 Aprovado com Distinção
2008/07/24
Concluded
 Mestrado em Métodos Computacionais em Ciências e Engenharia (Mestrado)
Universidade do Porto Faculdade de Engenharia, Portugal
"Emparelhamento de objectos representados em imagens usando técnicas de optimização" (THESIS/DISSERTATION)
 MUITO BOM
2001/07/11
Concluded
 Licenciatura em Ensino de Matemática (Licenciatura)
Major in Matemática
Universidade do Minho, Portugal
 16
Affiliation

Science

Category
Host institution 		Employer
2017/02/06 - Current Researcher (Research) Fundação Champalimaud, Portugal
2014/09/01 - 2017/02/05 Invited Auxiliary Researcher (Research) Universidade de Coimbra, Portugal
Universidade de Coimbra Faculdade de Medicina, Portugal
2013/07/01 - 2014/08/31 Invited Auxiliary Researcher (Research) Universidade de Coimbra, Portugal
ICNAS - Instituto de Ciências Nucleares Aplicadas à Saúde, Portugal

Teaching in Higher Education

Category
Host institution 		Employer
2004 - 2005 Invited Assistant (Polytechnic Teacher) Instituto Politécnico de Viana do Castelo Escola Superior de Tecnologia e Gestão, Portugal
Instituto Politécnico de Viana do Castelo Escola Superior de Tecnologia e Gestão, Portugal

Others

Category
Host institution 		Employer
2008 - 2013 Research fellow Associated Laboratory for Energy Transports and Aeronautics, Portugal
Instituto de Ciência e Inovação em Engenharia Mecânica e Engenharia, Portugal
Projects

Grant

Designation Funders
2018 - Current Cognition and brain amyloid deposition in transthyretin-related familial amyloid polyneuropathy
n/a
Researcher
Fundação Champalimaud, Portugal

Hospital de Santa Maria, Portugal
Pfizer Global Research and Development
Ongoing
2019 - 2022 LyRaCAD: CAD system for analysis of PET/CT images with FDG in lymphomas - a radiomics approach
LISBOA-01-0247-FEDER-039885
Researcher
Fundação Champalimaud, Portugal
 European Regional Development Fund
Concluded
2017 - 2021 Distress and regional brain metabolism: a correlational study in metastatic breast cancer patients
PTDC/MHC-PSC/3897/2014
Researcher
Fundação Champalimaud, Portugal

Universidade de Lisboa, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2017/02/07 - 2019/11/30 BTSCAD: Bone Tumor Scan - CAD
LISBOA-01-0247-FEDER-017685
Researcher
Fundação Champalimaud, Portugal
 European Regional Development Fund
Concluded
2010 - 2013 Methodologies to Analyse Organs from Complex Medical Images
PTDC/EEA-CRO/103320/2008
UTAustin/MAT/0009/2008
UTAustin/CA/0047/2008
Researcher
Universidade do Porto, Portugal
 Fundação para a Ciência e a Tecnologia
2008/12/01 - 2012/11/30 Emparelhamento e alinhamento de estruturas em visão computacional: aplicações em imagens médicas
95978
PhD Student Fellow
Universidade do Porto Faculdade de Engenharia, Portugal
 Fundação Calouste Gulbenkian
Concluded

Contract

Designation Funders
2016/07/01 - 2018/06/30 Quantificação em PET: construção de um sistema distribuído não-invasivo para medida da função de entrada arterial
PTDC/BBB-BMD/5378/2014
Researcher
Universidade de Coimbra, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2013/06/01 - 2017/02/06 From molecules to man: novel diagnostic imaging tools in neurological and psychiatric disorders
CENTRO-07-ST24-FEDER-00205
Researcher
Universidade de Coimbra, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
Outputs

Publications

Book chapter
  1. Oliveira, Francisco P. M.; Costa, Durval C.. Corresponding author: Oliveira, Francisco P. M.. "Computer-Aided Diagnosis of Parkinson's Disease, Based on SPECT Scans of the Dopamine Transporter". In PET and SPECT in Neurology, edited by Dierckx, R. A. J. O.; Otte, A.; de Vries, E. F. J.; van Waarde, A.; Leenders, K. L., 709-727. Cham: Springer International Publishing, 2021.
    Published • 10.1007/978-3-030-53168-3_25
Conference abstract
  1. Mendonça, Marcelo; Ferreira, Pedro C.; Oliveira, Francisco; Campos Costa, Durval; Albino J. Oliveira-Maia; Joaquim Alves da Silva. Corresponding author: Mendonça, Marcelo. "Integrity of dopaminergic terminals in the caudate nucleus modulates rest tremor in Parkinson's disease". Paper presented in XXIX IAPRD World Congress on Parkinson's Disease and Related Disorders, Lisbon, 2024.
    Published
  2. C. Silva, Luísa; Constantino, Cláudia; Silva, Mariana; Oliveira, Francisco; Campos Costa, Durval. Corresponding author: C. Silva, Luísa. "Inteligência artificial para remoção de ruído em aquisições ultra-rápidas PET/CT com [18F]FDG". Paper presented in XIX Congresso Nacional de Medicina Nuclear, Almada, 2024.
    Published
  3. Constantino, Cláudia; Oliveira, Francisco; Silva, Mariana; Canudo, Ana; Teixeira, Ricardo; Cláudia Matos; Sandra Vieira; et al. Corresponding author: Constantino, Cláudia. "Quantificação de lesões pulmonares em [18F]FDG PET/CT para prever a resposta local à radioterapia". Paper presented in XIX Congresso Nacional de Medicina Nuclear, Almada, 2024.
    Published
  4. Paulo Ferreira; Oliveira, Francisco; Mauro Costa; Rui Parafita; Canudo, Ana; Silva, Angelo; Costa, Durval C.. Corresponding author: Paulo Ferreira. "Verificação dosimétrica pós-terapêutica de doentes tratados com 177Lu-PSMA". Paper presented in XIX Congresso Nacional de Medicina Nuclear, Almada, 2024.
    Published
  5. Reis, Joaquim C.; Travado, Luzia; Heller, Aaron; Oliveira, FPM; Silvia D. Almeida; Berta de Sousa; Campos Costa, Durval; Antoni, Michael. "GREATER PERCEIVED STRESS MANAGEMENT SKILLS, BRAIN METABOLISM AND DEPRESSIVE SYMPTOMS IN METASTATIC BREAST CANCER PATIENTS". Paper presented in 24th IPOS World Congress of Psycho-Oncology, milão, 2023.
    Published
  6. Francisco Silva; Lopes, Raquel; Ana Sofia Capacho; Maria Fortunato; Sofia Vaz; Oliveira, Francisco; Cristina João; Costa, Durval C.. Corresponding author: Francisco Silva. ""In house" radiolabeling of anti-PD-L1 monoclonal antibodies with 111-Indium for in vivo imaging". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  7. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Duarte, Isabel Catarina; Moreno, Carolina; Ribeiro, Mário; Caramelo, Beatriz; et al. "Alterações na resposta cerebral no hipocampo e circuito de memória na diabetes tipo 2 sem comprometimento cognitivo". Paper presented in 19th Portuguese Meeting of Diabetes, Sociedade Portuguesa de Diabetologia ¿ SPD 2023, Vilamoura, 2023.
    Accepted
  8. Canário, Nádia; Crisóstomo, Joana; Duarte, João V; Duarte, Isabel Catarina; Moreno, Carolina; Ribeiro, Mário; Oliveira, Francisco; et al. "Impaired brain responses in hippocampus and memory circuit in type 2 diabetes without cognitive impairment". Paper presented in IV Congresso Internacional do Centro de Investigação em Neuropsicologia e Intervenção Cognitivo Comportamental - CINEICC 2023, Coimbra, 2023.
    Accepted
  9. Sobral, Miriam; Oliveira, Mafalda; Constantino, C. S.; Oliveira, Francisco; Matela, Nuno; Campos Costa, Durval. Corresponding author: Sobral, Miriam. "Primary tumour type impacts 3D U-Net for [18F]FDG PET lesion segmentation performance in cases of lung cancer, melanoma, and lymphoma". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  10. Constantino, Cláudia; Oliveira, Francisco; Leocádio, Sónia; Silva, Mariana; Carla Oliveira; Castanheira, Joana; Silva, Angelo; et al. Corresponding author: Constantino, Cláudia. "Deep learning-based fully automatic segmentation of whole-body [18F]FDG PET/CT images from lymphoma patients: addition of CT data has poor impact on networks performance". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  11. Costa, M.; Parafita, R.; Canudo, A.; Capacho, A.; Silva, F.; Delgado, H.; Correia, J.; et al. Corresponding author: Costa, M.. "A radiation exposure comparison between manual and automated setups during GALLIUM-68 peptide labelling". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  12. Constantino, Cláudia; Silva, Mariana; Oliveira, Francisco; Campos Costa, Durval. Corresponding author: Constantino, Cláudia. "Feasibility and reproducibility of radiomic features in real world whole-body [18F]FDG PET/CT oncology studies". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  13. Oliveira, Francisco; Silva, Angelo; Castanheira, Joana; Silva, Mariana; Constantino, Cláudia; Campos Costa, Durval. Corresponding author: Oliveira, Francisco. "Deep learning is a promising tool for fully automatic malignant lesions identification and segmentation in whole-body bone scans". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  14. Silva, L. C.; Constantino, C. S.; Silva, M.; Oliveira, F. P. M.; Vigario, R.; Costa, D. C.. Corresponding author: Silva, L. C.. "Image quantitative parameters using deep learning-based denoising of ultra-fast whole-body [18F]FDG PET/ CT are comparable to standard acquisitions". Paper presented in 36th Annual Congress of the European Association of Nuclear Medicine, Vienna, 2023.
    Published
  15. Oliveira, Francisco; Cláudia S. Constantino; Ângelo Silva; Joana C. Castanheira; Rita Oliveira; Costa, Durval C.. "Deep learning is a promising tool for fully automatic malignant lesions identification and segmentation in whole-body [68Ga]Ga-PSMA PET/CT scans". Paper presented in RSNA 2023 Annual Meeting, Chicago, 2023.
    Published
  16. Ribeiro, A.; Leite, P.; Constantino, Cláudia; Leocadio, S.; Oliveira, Francisco; Silva, M.; Oliveira, C.; et al. Corresponding author: Ribeiro, A.. "Feasibility of fully automated deep learning-based segmentation of lymphoma lesions in whole-body [18F]FDG PET/CT images". Paper presented in 35th Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2022.
    Published
  17. Oliveira, C.; Oliveira, Francisco; Constantino, Cláudia; Marques, H. Pinto; Cardoso, F.. Corresponding author: Oliveira, C.. "SUV-based features from baseline 2-[F-18]FDG-PET/CT in breast cancer patients differentiate tumor phenotypes but do not predict pathologic response to neoadjuvant chemotherapy". Paper presented in 35th Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2022.
    Published
  18. Valador, Natacha; Oliveira, Francisco; Ferreira, P. M. S.; Vieira, L.; Campos Costa, Durval. Corresponding author: Valador, Natacha. "Assessment of the potential of convolutional neuronal networks in the differential diagnosis of Parkinson's disease based on brain imaging [123I]FP-CIT SPECT". Paper presented in 35th Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2022.
    Published
  19. Constantino, Cláudia; Leocadio, S.; Oliveira, Francisco; Silva, Mariana; Oliveira, C.; Castanheira, Joana; Silva, Angelo; et al. "Quantification of patient's tumor burden for the differentiation of lymphomas with [18F]FDG PET images". Paper presented in 35th Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2022.
    Published
  20. Constantino, Cláudia; Silva, Mariana; Oliveira, Francisco; Campos Costa, Durval. Corresponding author: Constantino, Cláudia. "Feasibility of very fast whole-body [18F]FDG PET/CT acquisitions using a digital scanner without image enhancement technology". Paper presented in 35th Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2022.
    Published
  21. Mariana Silva; Oliveira, Francisco; Castanheira, Joana; et al. Corresponding author: Mariana Silva. "Classificação automática de lesões ósseas em imagens cintigráficas usando técnicas de machine learning". Paper presented in XVIII Congresso Nacional de Medicina Nuclear, Coimbra, 2022.
    Published
  22. Teixeira, Ricardo; Castanheira, Joana C.; Silva, Ângelo; Vaz, Sofia; Silva, Mariana; Canudo, Ana; Oliveira, Rita; et al. Corresponding author: Teixeira, Ricardo. "[123I]FP-CIT SPECT reconstruction: FBP versus OSEM with resolution recovery - a quantitative and qualitative comparison". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  23. Silva, Mariana; Oliveira, Francisco; Castanheira, Joana C.; Silva, Ângelo; Vieira, Lina; Costa, Durva. Corresponding author: Silva, Mariana. "Bone scintigraphy classification: a comparison between machine learning and deep learning classifiers using imaging data only". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  24. Rodrigues, Cristiana; Ferreira, Paulo; Oliveira, Francisco; Silva, Ângelo; Peralta, Luis; Costa, Durval C; Rodrigues, C.; et al. Corresponding author: Rodrigues, Cristiana. "Comparison of Voxel S-values and Monte Carlo Simulation in [177Lu]Lu-DOTA-TATE Quantification for Patient-Specific Dosimetry". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  25. Ribeiro, Maria; Ferreira, Paulo; Oliveira, Francisco; Cruz, J.; Costa, Durval C; Ribeiro, M.; Ferreira, P.; Oliveira, F. P.; Costa, D. C.. Corresponding author: Ribeiro, Maria. "Comparison of Two 90Y-charged Glass Microspheres Liver Radioembolisation Dosimetry Methods: Voxel S-values and Monte Carlo - GATE". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  26. Oliveira, Rita; Oliveira, Francisco; Cláudia S. Constantino; Vieira, Lina; Costa, Mauro; Costa, Durval C. Corresponding author: Oliveira, Rita. "Comparison of quantitative measures between EARL1 and EARL2 specifications in PET/CT studies using Gallium-68". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  27. Morgado, Joana; Ferreira, Paulo; Di Maria, Salvatore; Oliveira, Francisco; Vigário, R.; Costa, Durval C; Morgado, J.; et al. Corresponding author: Morgado, Joana. "Voxel-wise Dosimetry of [68Ga]Ga-PSMA-11 and Comparison With the Literature". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  28. Ferreira, Sara; Alves, Pedro; Conceição, I; Martins, I. P. ; Oliveira, Francisco; Silva, Mariana; Matela, Nuno; et al. Corresponding author: Ferreira, Sara. "Perfusion-like images based on [18F]florbetaben PET correlate well with brain metabolism in patients with inherited transthyretin-related amyloidosis". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  29. Constantino, C. S.; Leocádio, Sónia; Oliveira, Francisco; Silva, Mariana; Oliveira, Carla; Castanheira, Joana C.; Silva, Ângelo; et al. Corresponding author: Constantino, C. S.. "Quantification of whole-body [18F]FDG avid lymphoma lesions: advantages of semiautomatic over manual segmentation". Paper presented in EANM'21 - 34th Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2021.
    Published
  30. Ferreira, S.; Oliveira, F.; Silva, M.; Oliveira, R.; Silva, A.; Oliveira, C.; Castanheira, J.; et al. Corresponding author: Ferreira, S.. "Correlation assessment between brain 18F-Florbetaben PET/CT SUVR late acquisitions and parametric images obtained from dynamic acquisitions compartmental analysis". Paper presented in EANM'20 - 33rd Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2020.
    Published
  31. Costa, M.; Silva, M.; Parafita, R.; Canudo, A.; Freitas, B.; Delgado, H.; Correia, J. M.; et al. Corresponding author: Costa, M.. "Comparative Study of PET injectors in the routine practice of Nuclear Medicine". Paper presented in EANM'20 - 33rd Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2020.
    Published
  32. Rodrigues, Cristiana; Ferreira, Paulo; Oliveira, Francisco; Silva, Ângelo; Peralta, Luis; Costa, Durval C.; Rodrigues, C.; et al. Corresponding author: Rodrigues, C.. "177Lu-DOTATATE Quantification for Patient Personalised Dosimetry in Therapy of Neuroendocrine Tumours". Paper presented in EANM'20 - 33rd Annual Congress of the European Association of Nuclear Medicine, (Virtual), 2020.
    Published
  33. Sousa, Mário; Cunha, Inês; Soeiro, Paula; Silva, Rodolfo; Cunha, Maria; Oliveira, Francisco; Almeida, Maria; et al. Corresponding author: Sousa, Mário. "Dopaminergic Neuronal Imaging in Parkinson's disease parkin mutation patients and potential pathophysiologic insights of simple heterozygous patients: A clinical DAT-SPECT study". Paper presented in American Academy of Neurology Anual Meeting 2020, Toronto, 2020.
    Published
  34. Ferreira, S.; Oliveira, F. P. M.; Silva, M.; Silva, A.; Oliveira, C.; Castanheira, J. C.; Vaz, S. C.; et al. Corresponding author: Ferreira, S.. "Noninvasive Tracer Kinetic Analysis of Brain 18F-Florbetaben PET: a Comparison of Kinetic Models". Paper presented in EANM'19 - 32nd Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2019.
    Published
  35. Almeida, S. D.; Oliveira, F. P. M.; Costa, D. C.; Castanheira, J. C.; Silva, M.; Reis, J. C.; Almeida, P.; et al. Corresponding author: Almeida, S. D.. "Assessment of Brain Regional Hypometabolism in Metastatic Breast Cancer Patients with 18F-fluorodeoxiglucose: Influence of the Reference Region". Paper presented in EANM'19 - 32nd Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2019.
    Published
  36. Oliveira, Francisco; Silva, Angelo; Castanheira, Joana C.; Canudo, Ana; Mairos, Sónia; Silva, Mariana; Cruz, José; et al. Corresponding author: Oliveira, Francisco. "Evaluation of atlas based attenuation correction in bone scintigraphy". Paper presented in EANM'19 - 32nd Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2019.
    Published
  37. Ferreira, P.; Oliveira, F. P. M.; Parafita, R.; Girao, P. S.; Correia, P. L.; Pares, O.; Costa, D. C.. Corresponding author: Ferreira, P.. "Voxel-based Dosimetry in the Liver: Yttrium-90 Microspheres Radioembolization After SBRT". Paper presented in EANM'19 - 32nd Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2019.
    Published
  38. Constantino, C. S.; Oliveira, F. P. M.; Silva, M.; Oliveira, C.; Castanheira, J. C.; Silva, A.; Vaz, S. C.; et al. Corresponding author: Constantino, C. S.. "Reproducibility Study of Lesion Features Extracted from 18F-FDG PET Images of the Same Patients Acquired on Two Philips PET/CT Scanners: Digital VEREOS versus GEMINI TF". Paper presented in EANM'19 - 32nd Annual Congress of the European Association of Nuclear Medicine, Barcelona, 2019.
    Published
  39. Cláudia S. Constantino; Oliveira, Francisco; Silva, Mariana; Oliveira, Carla; Castanheira, Joana C.; Silva, Ângelo; C. Vaz, Sofia; et al. "Segmentação automática de lesões ávidas para FDG em PET/CT baseada numa técnica de clustering bayesiana". Paper presented in XVII Congresso Nacional de Medicina Nuclear, Porto, 2019.
    Published
  40. Ferreira, Sara; Oliveira, Francisco; Matela, Nuno; Sanchez-Gonzalez, Javier; Campos Costa, Durval. "Comparação de regiões de referência para normalização de captação em estudos PET cerebrais com 18F-florbetapir". Paper presented in XVII Congresso Nacional de Medicina Nuclear, Porto, 2019.
    Published
  41. Oliveira, Francisco; Ferreira, Sara; Silva, Mariana; Silva, Ângelo; Castanheira, Joana C.; Carrilho Vaz, Sofia; Campos Costa, Durval. "Análise de concordância entre observadores na classificação de imagens cerebrais PET com 18F-florbetaben e comparação com classificação automática". Paper presented in XVII Congresso Nacional de Medicina Nuclear, Porto, 2019.
    Published
  42. Constantino, Cláudia S.; Oliveira, Francisco; Silva, Mariana; Oliveira, Carla; Castanheira, Joana C.; Silva, Ângelo; Vaz, Sofia C.; Vieira, Pedro; Costa, Durval C.. "Extração de características de lesões ávidas para FDG: estudo da reprodutibilidade entre Philips Vereos Digital e GEMINI TF16 PET/CT". Paper presented in XVII Congresso Nacional de Medicina Nuclear, Porto, 2019.
    Published
  43. Almeida, Sílvia D.; Oliveira, Francisco; Oliveira, Maria J. ; Oliveira, José M. ; Faria, Diogo Borges; Costa, Durval Campos. "Estimulação com TSHr evita o hipometabolismo cerebral importante da suspensão de tiroxina". Paper presented in XVII Congresso Nacional de Medicina Nuclear, Porto, 2019.
    Published
  44. Andrade, Miguel; Oliveira, Francisco; Carapinha, Maria Raminhas ; Campos Costa, Durval. "Avaliação da biodistribuição normal de 68Ga-PSMA e sua variação temporal pós-injeção". Paper presented in XVII Congresso Nacional de Medicina Nuclear, Porto, 2019.
    Published
  45. Oliveira, Francisco; Castanheira, Joana C.; Silva, Angelo; Canudo, Ana; Mairos, Sónia; Cruz, José; Yelshyna, D.; et al. Corresponding author: Oliveira, Francisco. "Automated pixelwise statistical analysis in the routine assessment of bone scintigraphy". Paper presented in EANM'18 - 31st Annual Congress of the European Association of Nuclear Medicine, Düsseldorf, 2018.
    Published
  46. Oliveira, Francisco; Silva, Angelo; Castanheira, Joana C.; Canudo, Ana; Mairos, Sónia; Cruz, José; Yelshyna, D.; et al. "Validation of a fully automated atlas based segmentation tool for bone scintigraphy". Paper presented in 31st Annual Congress of the European Association of Nuclear Medicine, Düsseldorf, 2018.
    Published
  47. Gois, L.; Ferreira, N.; Abrunhosa, A.; Moreira, A.; Oliveira, F.; Patricio, M.; Caramelo, F.. "qPET: a system for assessing the arterial input function for PET quantification". Paper presented in EANM'18 - 31st Annual Congress of the European Association of Nuclear Medicine, Düsseldorf, 2018.
    Published
  48. Yelshyna, D.; Oliveira, F.; Castanheira, J.; Silva, A.; Canudo, A.; Mairos, S.; Cruz, J.; et al. "Evaluation of imaging biomarkers in the detection of bone metastases in patients with prostate or breast cancer". Paper presented in EANM'18 - 31st Annual Congress of the European Association of Nuclear Medicine, Düsseldorf, 2018.
    Published
  49. Ferreira, Paulo; Oliveira, Francisco; Rosa, Luís; Oliveira, Carla; Parafita, Rui; Canudo, Ana; Correia, Paulo Lobato; Girão, Pedro S.; Campos Costa, Durval. "Otimização automática da dosimetria específica do doente submetido a radioembolização com microesferas de vidro marcadas com Y-90". Paper presented in XVI Congresso Nacional de Medicina Nuclear, Lisboa, 2017.
    Published
  50. Oliveira, Francisco; Yelshyna, Darya; Castanheira, Joana C.; Silva, Angelo; Canudo, Ana; Mairos, Sónia; Veiga, Diana; et al. "Segmentação do esqueleto e análise estatística automáticas de cintigrafias ósseas de corpo inteiro". Paper presented in XVI Congresso Nacional de Medicina Nuclear, Lisboa, 2017.
    Published
  51. Demino, Laura; Ferreira, Paulo; Oliveira, Francisco; Campos Costa, Durval. "Importância da correção para a atenuação das imagens de SPECT/99mTc-MAA na dosimetria da radioembolização do fígado com microesferas de vidro com 90Y". Paper presented in XVI Congresso Nacional de Medicina Nuclear, Lisboa, 2017.
    Published
  52. Moreira, Eduardo; Ferreira, Paulo; Oliveira, Francisco; Parafita, Rui; Canudo, Ana; Silva, Mariana; Oliveira, Carla; Rosa, Luís; Campos Costa, Durval. "Quantificação da distribuição de ítrio-90 com PET na avaliação pós radioembolização hepática". Paper presented in XVI Congresso Nacional de Medicina Nuclear, Lisboa, 2017.
    Published
  53. Xavier, Carolina; Oliveira, Francisco; Moreira, Ana Paula; Ferreira, Rui; Mendonça, Alexandre; Verdelho, Ana; Rio, Joana; et al. "Comparação entre a PET/CT cerebral com 18F-FDG e a fase de perfusão da PET/CT com 11C-PIB". Paper presented in XVI Congresso Nacional de Medicina Nuclear, Lisboa, 2017.
    Published
  54. Tabuas-Pereira, M.; Oliveira, Francisco; Moreira, A.; Sousa, M.; Moreira, F.; Januario, C.; Abrunhosa, A.; Castelo-Branco, M.. "PET examination of the monoamine transporter with 11C-beta-CIT". Paper presented in 20th International Congress of Parkinson's Disease and Movement Disorders, Berlin, 2016.
    Published
  55. Resende, Rosa; Ferreira-Marques, Marisa; Dinis, Teresa; Oliveira, Francisco; Sereno, José; Abrunhosa, Antero; Castelo-Branco, M.; Pereira, Cláudia; Santos, Armanda. "New BACE1 inhibitors decrease Aß production and accumulation in the 3xtg-AD mouse model". Paper presented in XIX National Congress of Biochemistry, Guimarães, 2016.
    Published
  56. Oliveira, Francisco; Tavares, João Manuel R. S.. "Automated spatio-temporal alignment of plantar pressure image sequences". Paper presented in CMBBE2013 - 11th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering, Salt Lake City, 2013.
    Published
  57. Ferreira, Ana; Oliveira, Francisco; Gentil, Fernanda; Tavares, João Manuel R. S.. "A method to automatically segment the internal ear structures in CT images". Paper presented in IRF2013 - 4th International Conference on Integrity, Reliability & Failure, Funchal, 2013.
    Published
  58. Oliveira, Francisco; Tábuas, Carolina; Gomes, Pedro; Tavares, João Manuel R. S.. "Spatio-temporal registration of plantar pressure image sequences". Paper presented in 12th US National Congress of Computational Mechanics, Raleigh, 2013.
    Published
  59. Gomes, Pedro; Oliveira, Francisco; Tavares, João Manuel R. S.. "Building of a representative plantar pressure image sequence". Paper presented in ICCEBS2013 - International Conference on Computational and Experimental Biomedical Sciences, Ponta Delgada, 2013.
    Published
  60. Gomes, Pedro; Oliveira, Francisco; Tavares, João Manuel R. S.. "Alignment of plantar pressure image sequences". Paper presented in ICCEBS2013 - International Conference on Computational and Experimental Biomedical Sciences, Ponta Delgada, 2013.
    Published
  61. Oliveira, Francisco; Tavares, João Manuel R. S.. "Automated approach for the segmentation of the incus and malleus middle ear bones in 3D CT images". Paper presented in ICCEBS2013 - International Conference on Computational and Experimental Biomedical Sciences, Ponta Delgada, 2013.
    Published
  62. Borges Faria, D.; Oliveira, Francisco; Tavares, João; Campos Costa, Durval. "Quantificação em estudos SPECT com 123I-FP-CIT - influência do método de reconstrução". Paper presented in XIV Congresso Nacional de Medicina Nuclear, Porto, 2013.
    Published
  63. Oliveira, Francisco; Faria, Diogo Borges; Tavares, João Manuel R. S.; Costa, Durval C. "Quantificação em estudos SPECT com 123I-FP-CIT: determinação automática de índices de captação específica e análise dimensional das regiões de elevada captação". Paper presented in XIV Congresso Nacional de Medicina Nuclear, Porto, 2013.
    Published
  64. Oliveira, Francisco; Tavares, Joao Manuel R. S.. "Registration of plantar pressure images". Paper presented in CompBioMed - 2nd International Conference on Computational & Mathematical Biomedical Engineering, Washington D. C., 2011.
    Published • 10.1002/cnm.1461
  65. Oliveira, Francisco; Tavares, Joao Manuel R. S.. "A comparison of four algorithms in the alignment of plantar pressure images". Paper presented in ICCES'11 - International Conference on Computational and Experimental Engineering & Sciences, Nanjing, 2011.
    Published
  66. Oliveira, Francisco; Tavares, João Manuel R. S.. "Alignment of dynamic plantar pressure image sequences". Paper presented in 11th U.S. National Congress on Computational Mechanics, Minneapolis, 2011.
    Published
  67. Oliveira, Francisco; Tavares, Joao Manuel R. S.. "Alignment of image data based on geometric information and optimization". Paper presented in Mathematical Aspects of Imaging, Modeling and Visualization in Multiscale Biology, Austin, 2009.
    Published
  68. Oliveira, Francisco; Tavares, Joao Manuel R. S.; Oliveira, F.P.M.; Tavares, J.M.R.S.. "Algorithm of dynamic programming for optimization of the global matching between two contours defined by ordered points". Paper presented in ICCES08 – International Conference on Computational and Experimental Engineering & Sciences, Honolulu, 2008.
    Published
Conference paper
  1. Constantino, Cláudia S.; Oliveira, Francisco; Leocádio, Sónia; Silva, Mariana; Oliveira, Carla; Castanheira, Joana C.; Silva, Ângelo; et al. Corresponding author: Constantino, Cláudia S.. "A robust deep-learning model for fully automatic segmentation of lymphoma lesions on whole-body [18F]FDG PET/CT images". Paper presented in IEEE International Symposium on Biomedical Imaging, Athens, 2024.
    Published • 10.1109/isbi56570.2024.10635135
  2. Ferreira, Paulo; Oliveira, Francisco P. M.; Parafita, Rui; Girão, Pedro S.; Correia, Paulo L.; Pares, Oriol; Costa, Durval C.. Corresponding author: Ferreira, Paulo. "Voxel-Based Computational Tools Help Liver Dosimetry Calculations of Multiple (External and Internal) Radiation Therapies". Paper presented in ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing, Porto, 2019.
    Published • 10.1007/978-3-030-32040-9_22
  3. Machado, M.; Oliveira, F.P.M.; Vieira, L.; Costa, D.C.; Machado, Marisa; Oliveira, Francisco P. M.; Vieira, Lina; Costa, Durval C.. "Evaluation of the attenuation correction on myocardial perfusion imaging: A phantom study". Paper presented in 6th IEEE Portuguese Meeting on Bioengineering (ENBENG 2019), Lisboa, 2019.
    Published • 10.1109/ENBENG.2019.8692480
  4. Demino, L.; Ferreira, P.; Oliveira, F.P.M.; Costa, D.C.. "The importance of SPECT imaging attenuation correction during treatment planning for 90Y-labeled glass microspheres liver radioembolization". Paper presented in VI ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing, Porto, 2017.
    Published • 10.1007/978-3-319-68195-5_29
  5. Pereira, Carlos; Abrunhosa, Antero; Cruz, Angela; Ferreira, Nuno; Moreira, Ana; Oliveira, Francisco; Patricio, Miguel; Caramelo, Francisco. "Distributed non-invasive system for measuring the arterial input function in PET". Paper presented in 2017 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), Atlanta, 2017.
    Published • 10.1109/NSSMIC.2017.8532753
  6. Oliveira, Francisco; Pataky, Todd C.; Tavares, Joao Manuel R. S.. "Registration of pedobarographic images". Paper presented in CMBBE2010 - Computer Methods in Biomechanics and Biomedical Engineering, Valencia, 2010.
    Published
  7. Oliveira, Francisco; Tavares, João Manuel R. S.; Pataky, Todd C.. "A versatile matching algorithm based on dynamic programming with circular order preserving". Paper presented in II ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing, Porto, 2009.
    Published • 10.13140/2.1.3646.0486
  8. Oliveira, F.M.; Tavares, J.M.R.S.. "Matching contours in images using curvature information". Paper presented in VIPimage 2007 – I ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing, Porto, 2007.
    Published
Journal article
  1. Carla Oliveira; Oliveira, Francisco; Cláudia S. Constantino; Celeste Alves; Maria José Brito; Fátima Cardoso; Costa, Durval C.. Corresponding author: Carla Oliveira. "Baseline [18F]FDG PET/CT and MRI first-order breast tumor features do not improve pathological complete response prediction to neoadjuvant chemotherapy". European Journal of Nuclear Medicine and Molecular Imaging (2024): https://doi.org/10.1007/s00259-024-06815-6.
    Open access • Published • 10.1007/s00259-024-06815-6
  2. Fonseca, Jorge; Moraes-Fontes, Maria Francisca; Sousa, Inês; Oliveira, Francisco; Froes, Gonçalo; Gaivão, Ana; Palmas, Artur; et al. Corresponding author: Fonseca, Jorge. "Membranous urethral length is the single independent predictor of urinary continence recovery at 12 months following Retzius-sparing robot-assisted radical prostatectomy". Journal of Robotic Surgery 18 1 (2024): http://dx.doi.org/10.1007/s11701-024-01986-8.
    Open access • Published • 10.1007/s11701-024-01986-8
  3. Canário, Nádia; Crisóstomo, Joana; Duarte, João Valente; Moreno, Carolina; Quental, Hugo; Gomes, Leonor; Oliveira, Francisco; Castelo-Branco, Miguel. "Irreversible atrophy in memory brain regions over 7¿years is predicted by glycemic control in type 2 diabetes without mild cognitive impairment". Frontiers in Aging Neuroscience 16 (2024): http://dx.doi.org/10.3389/fnagi.2024.1367563.
    Open access • Published • 10.3389/fnagi.2024.1367563
  4. Nádia S. Canário; Joana Crisóstomo; Carolina Moreno; João V. Duarte; Isabel C. Duarte; Mário J. Ribeiro; Beatriz Caramelo; et al. "Functional reorganization of memory processing in the hippocampus is associated with neuroprotector GLP-1 levels in type 2 diabetes". Heliyon (2024): http://dx.doi.org/10.1016/j.heliyon.2024.e27412.
    10.1016/j.heliyon.2024.e27412
  5. Gabriela Ribeiro; Ana Maia; Gonçalo Cotovio; Francisco P. M. Oliveira; Durval C. Costa; Albino J. Oliveira-Maia. "Striatal dopamine D2-like receptors availability in obesity and its modulation by bariatric surgery: a systematic review and meta-analysis". Scientific Reports 13 1 (2023): http://dx.doi.org/10.1038/s41598-023-31250-2.
    10.1038/s41598-023-31250-2
  6. Carla Oliveira; Francisco Oliveira; Sofia C. Vaz; Hugo Pinto Marques; Fátima Cardoso. "Prediction of pathological response after neoadjuvant chemotherapy using baseline FDG PET heterogeneity features in breast cancer". The British Journal of Radiology (2023): http://dx.doi.org/10.1259/bjr.20220655.
    10.1259/bjr.20220655
  7. Fonseca, Jorge; Moraes-Fontes, Maria Francisca; Rebola, Jorge; Lucio, Rui; Almeida, Miguel; Muresan, Ciprian; Palmas, Artur; et al. "Retzius-sparing robot-assisted radical prostatectomy in a medium size oncological center holds adequate oncological and functional outcomes". Journal of Robotic Surgery (2023): https://publons.com/wos-op/publon/55398518/.
    10.1007/S11701-022-01517-3
  8. Constantino, Claudia S; Leocadio, Sonia; Oliveira, Francisco P M; Silva, Mariana; Oliveira, Carla; Castanheira, Joana C; Silva, Angelo; et al. "Evaluation of Semiautomatic and Deep Learning-Based Fully Automatic Segmentation Methods on [18F]FDG PET/CT Images from Patients with Lymphoma: Influence on Tumor Characterization". Journal of Digital Imaging (2023): https://publons.com/wos-op/publon/58144939/.
    Published • 10.1007/S10278-023-00823-Y
  9. Francisco P. M. Oliveira; Durval C. Costa. "Commentary: Application of automatic semi-quantification in clinical routine positron emission tomography brain studies is here to stay". European Radiology (2023): https://publons.com/wos-op/publon/58144591/.
    10.1007/S00330-023-09637-6
  10. Ruano, Carina A; Veiga, Jose; Antunes, Natalie; Carvalho, Vera B; Fernandes, Otilia; Borba, Alexandra; Oliveira, Francisco P M; et al. "Segmentation-Based Analysis of T2- and T1-Weighted Dynamic Magnetic Resonance Images Provides Adequate Observer Agreement in the Evaluation of Interstitial Lung Disease". Journal of Computer Assisted Tomography (2023): https://publons.com/wos-op/publon/64135032/.
    10.1097/RCT.0000000000001524
  11. Reis, Joaquim C.; Travado, Luzia; Heller, Aaron S.; Oliveira, Francisco P. M.; Almeida, Silvia D.; Sousa, Berta; Costa, Durval C.; Antoni, Michael H.. "Greater perceived stress management skills and heightened brain metabolic activity in cortical and subcortical stress processing regions in metastatic breast cancer patients". Brain Imaging and Behavior (2023): https://publons.com/wos-op/publon/64269815/.
    10.1007/S11682-023-00821-2
  12. Fonseca, Jorge; Froes, Goncalo; Moraes-Fontes, Maria Francisca; Rebola, Jorge; Lucio, Rui; Almeida, Miguel; Muresan, Ciprian; et al. "Urinary continence recovery after Retzius-sparing robot-assisted radical prostatectomy in relation to surgeon experience". Journal of Robotic Surgery (2023): https://publons.com/wos-op/publon/64135034/.
    10.1007/S11701-023-01687-8
  13. Paulo Ferreira; Francisco P. M. Oliveira; Rui Parafita; Paulo L. Correia; Pedro S. Girão; Durval C. Costa. "An Optimized Methodology for Patient-Specific Therapeutic Activity Administration in Liver Radioembolization". Applied Sciences (2022): https://doi.org/10.3390/app122211669.
    10.3390/app122211669
  14. Maria Francisca Moraes-Fontes; Filipa Pedro; Maria Manuel Campos; Melissa Fernandes; Sule Yavuz; Francisco Oliveira; António Panarra; Samar Tharwat. "Primary Anti-Phospholipid Antibody Syndrome: Real-World Defining Features of Rethrombosis in the Course of Disease". International Journal of Rheumatology (2022): https://doi.org/10.1155/2022/7331586.
    10.1155/2022/7331586
  15. Sílvia D. Almeida; Francisco P. M. Oliveira; Maria J. Oliveira; José M. Oliveira; Rita Afonso; Diogo B. Faria; Durval C. Costa. "Brain [18F]Fluorodeoxyglucose Metabolism Assessment under Hypothyroidism and Recombinant Human Thyroid-Stimulating Hormone in Comparison with Thyroid Hormone Replacement in Patients Submitted to Total Thyroidectomy". Applied Sciences (2022): https://doi.org/10.3390/app12199437.
    10.3390/app12199437
  16. Francisco PM Oliveira; Sara MF Ferreira; Mariana GG Silva; Joana C. Castanheira; Ricardo JV Teixeira; Durval C. Costa. "Patlak plot based on the first 30 minutes post-injection dynamic 18F-florbetaben positron emission tomography scan separates amyloid-ß positive from negative studies". The British Journal of Radiology (2022): https://doi.org/10.1259/bjr.20211023.
    10.1259/bjr.20211023
  17. Greco, Carlo; Pares, Oriol; Pimentel, Nuno; Louro, Vasco; Morales, Javier; Nunes, Beatriz; Antunes, Inês; et al. "Positron Emission Tomography-Derived Metrics Predict the Probability of Local Relapse After Oligometastasis-Directed Ablative Radiation Therapy". Advances in Radiation Oncology 7 2 (2022): 100864. http://dx.doi.org/10.1016/j.adro.2021.100864.
    Published • 10.1016/j.adro.2021.100864
  18. Carla Lopes; I. Luísa Ferreira; Carina Maranga; Margarida Beatriz; Sandra I. Mota; José Sereno; João Castelhano; et al. "Mitochondrial and redox modifications in early stages of Huntington's disease". Redox Biology (2022): https://publons.com/wos-op/publon/53574724/.
    10.1016/J.REDOX.2022.102424
  19. Travado, Luzia; Reis, Joaquim C.; Antoni, Michael H.; Seixas, Elsa; Oliveira, Francisco; Sousa, Berta; Almeida, Silvia D.; Almeida, Pedro; Costa, Durval. "Emotional distress, brain functioning, social well-being and biobehavioral processes in metastatic breast cancer patients: outcomes of the DistressBrain project". The Breast 59 (2021): S55-S56. http://dx.doi.org/10.1016/s0960-9776(21)00564-6.
    Published • 10.1016/s0960-9776(21)00564-6
  20. Oliveira, C.; Oliveira, F.P.M.; Barata, M.J.; Teixeira, S.M.; João, C.; Costa, D.C.. "Pixelwise corrected ventilation/perfusion ratios improved detection of mismatched perfusion defects". Revista Española de Medicina Nuclear e Imagen Molecular (English Edition) 40 5 (2021): 313-314. http://dx.doi.org/10.1016/j.remnie.2020.09.015.
    Published • 10.1016/j.remnie.2020.09.015
  21. Oliveira, C.; Oliveira, F.P.M.; Barata, M.J.; Teixeira, S.M.; João, C.; Costa, D.C.. Corresponding author: Oliveira, C.. "Las relaciones de ventilación/perfusión corregidas por píxeles mejoraron la detección de defectos de perfusión no coincidentes". Revista Española de Medicina Nuclear e Imagen Molecular 40 5 (2021): 313-314. http://dx.doi.org/10.1016/j.remn.2020.07.005.
    Published • 10.1016/j.remn.2020.07.005
  22. Ricardo Martins; Francisco Oliveira; Fradique Moreira; Ana Paula Moreira; Antero Abrunhosa; Cristina Januário; Miguel Castelo-Branco. "Automatic classification of idiopathic Parkinson's disease and atypical Parkinsonian syndromes combining [11C]raclopride PET uptake and MRI grey matter morphometry". Journal of Neural Engineering 18 4 (2021): 046037-046037. https://doi.org/10.1088/1741-2552/abf772.
    Open access • Published • 10.1088/1741-2552/abf772
  23. Rebelo, Diliana; Oliveira, Francisco; Abrunhosa, Antero; Januário, Cristina; Lemos, João; Castelo-Branco, Miguel. "A link between synaptic plasticity and reorganization of brain activity in Parkinson's disease". Proceedings of the National Academy of Sciences 118 3 (2021): e2013962118. http://dx.doi.org/10.1073/pnas.2013962118.
    Open access • Published • 10.1073/pnas.2013962118
  24. Oliveira, Francisco P. M.; Walker, Zuzana; Walker, Rodney W. H.; Attems, Johannes; Castanheira, Joana C.; Silva, Angelo; Oliveira, Carla; et al. Corresponding author: Oliveira, Francisco P M. "123I-FP-CIT SPECT in dementia with Lewy bodies, Parkinson's disease and Alzheimer's disease: a new quantitative analysis of autopsy confirmed cases". Journal of Neurology, Neurosurgery & Psychiatry 92 6 (2021): 662-667. https://publons.com/publon/50533563/.
    Published • 10.1136/JNNP-2020-324606
  25. Vaz, Sofia C.; Oliveira, Francisco; Herrmann, Ken; Veit-Haibach, Patrick. "Nuclear medicine and molecular imaging advances in the 21st century". The British Journal of Radiology 93 1110 (2020): 20200095. http://dx.doi.org/10.1259/bjr.20200095.
    Open access • Published • 10.1259/bjr.20200095
  26. Joaquim C. Reis; Luzia Travado; Michael H. Antoni; Francisco P. M. Oliveira; Silvia D. Almeida; Pedro Almeida; Aaron S. Heller; Berta Sousa; Durval C. Costa. "Negative affect and stress-related brain metabolism in patients with metastatic breast cancer". Cancer 126 13 (2020): 3122-3131. https://doi.org/10.1002/cncr.32902.
    Open access • Published • 10.1002/cncr.32902
  27. Almeida, Sílvia D.; Santinha, João; Oliveira, Francisco P. M.; Ip, Joana; Lisitskaya, Maria; Lourenço, João; Uysal, Aycan; et al. "Quantification of tumor burden in multiple myeloma by atlas-based semi-automatic segmentation of WB-DWI". Cancer Imaging 20 6 (2020): 1-10. http://dx.doi.org/10.1186/s40644-020-0286-5.
    Open access • Published • 10.1186/s40644-020-0286-5
  28. Constantino, Claudia S.; Oliveira, Francisco P. M.; Silva, Mariana; Oliveira, Carla; Castanheira, Joana C.; Silva, Angelo; Vaz, Sofia C.; et al. Corresponding author: Constantino, Cláudia S.. "Are lesion features reproducible between 18F-FDG PET/CT images when acquired on analog or digital PET/CT scanners?". European Radiology 31 5 (2020): 3071-3079. https://publons.com/publon/34898320/.
    Published • 10.1007/S00330-020-07390-8
  29. Reis, Joaquim C.; Travado, Luzia; Antoni, Michael H.; Almeida, Silvia D.; Oliveira, Francisco; Sousa, Berta; Almeida, Pedro; Castanheira, Joana; Costa, Durval. "EMOTIONAL DISTRESS AND BRAIN FUNCTIONING METABOLISM IN METASTATIC BREAST CANCER PATIENTS: A NEURO-IMAGING STUDY WITH 18F-FDG PET/CT". The Breast 48 (2019): S64. http://dx.doi.org/10.1016/s0960-9776(19)30722-2.
    Published • 10.1016/s0960-9776(19)30722-2
  30. Greco, C.; Pimentel, N.; Pares, O.; Louro, V.; Morales, J.; Vasconcelos, A.L.; Nunes, B.; et al. Corresponding author: Greco, C.. "Pre-Treatment and Early Post-Radiotherapy PET Metabolic Metrics Predict Probability of Local Relapse in Oligometastases". International Journal of Radiation Oncology*Biology*Physics 105 1 (2019): S73. http://dx.doi.org/10.1016/j.ijrobp.2019.06.528.
    Published • 10.1016/j.ijrobp.2019.06.528
  31. Chiquita, Samuel; Ribeiro, Mário; Castelhano, João; Oliveira, Francisco; Sereno, José; Batista, Marta; Abrunhosa, Antero; et al. "A longitudinal multimodal in vivo molecular imaging study of the 3xTg-AD mouse model shows progressive early hippocampal and taurine loss". Human Molecular Genetics 28 13 (2019): 2174-2188. http://dx.doi.org/10.1093/hmg/ddz045.
    Open access • Published • 10.1093/hmg/ddz045
  32. Canário, Nádia; Sousa, Mário; Moreira, Fradique; Duarte, Isabel Catarina; Oliveira, Francisco; Januário, Cristina; Castelo-Branco, Miguel; et al. "Impulsivity across reactive, proactive and cognitive domains in Parkinson's disease on dopaminergic medication: Evidence for multiple domain impairment". PLOS ONE 14 2 (2019): e0210880. http://dx.doi.org/10.1371/journal.pone.0210880.
    Open access • Published • 10.1371/journal.pone.0210880
  33. Travado, Luzia; Reis, Joaquim C.; Antoni, Michael H.; Almeida, Silvia D.; Oliveira, Francisco; Oliveira, Francisco. "Self-management skills as predictors of positive affect and social well-being in metastatic breast cancer patients". The Breast (2019): https://publons.com/publon/28494965/.
    Published • 10.1016/S0960-9776(19)30721-0
  34. Demino, Laura; Ferreira, Paulo; P. M. Oliveira, Francisco; Costa, Durval C.. Corresponding author: Demino, Laura. "Comparison of the 90Y-labelled glass microspheres liver radioembolisation dosimetry with the estimated dosimetry obtained from pre-treatment 99mTc-MAA SPECT images reconstructed with and without attenuation correction". Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization 7 5-6 (2018): 651-659. http://dx.doi.org/10.1080/21681163.2018.1542348.
    Published • 10.1080/21681163.2018.1542348
  35. Vaz, Sofia Carrilho; Capacho, Ana Sofia; Oliveira, Francisco; Gil, Nuno; Teixeira Barros, Carla; Parreira, António; Costa, Durval C.. "Radiopharmacology and molecular imaging of PD-L1 expression in cancer". Clinical and Translational Imaging 6 6 (2018): 429-439. http://dx.doi.org/10.1007/s40336-018-0303-x.
    Published • 10.1007/s40336-018-0303-x
  36. FERREIRA, PAULO; Oliveira, Francisco; Parafita, Rui; Girão, Pedro S.; Correia, Paulo L.; Costa, Durval C.. "Patient-specific gamma-index analysis to evaluate 99mTc-MAA as a predictor for 90Y glass microspheres liver radioembolisation dosimetry". Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization 7 5-6 (2018): 583-589. http://dx.doi.org/10.1080/21681163.2018.1501768.
    Published • 10.1080/21681163.2018.1501768
  37. Oliveira, F.P.M.; Moreira, A.P.; De Mendonça, A.; Verdelho, A.; Xavier, C.; Barroca, D.; Rio, J.; et al. "Can 11C-PiB-PET relative delivery R1 or 11C-PiB-PET perfusion replace 18F-FDG-PET in the assessment of brain neurodegeneration?". Journal of Alzheimer's Disease 65 1 (2018): 89-97. http://www.scopus.com/inward/record.url?eid=2-s2.0-85051843086&partnerID=MN8TOARS.
    Open access • Published • 10.3233/JAD-180274
  38. Oliveira, Francisco P. M.; Faria, Diogo Borges; Costa, Durval C.; Castelo-Branco, Miguel; Tavares, Joao Manuel R. S.; Tavares, João Manuel R. S.. Corresponding author: Tavares, João Manuel R. S.. "Extraction, selection and comparison of features for an effective automated computer-aided diagnosis of Parkinson's disease based on [123I]FP-CIT SPECT images". European Journal of Nuclear Medicine and Molecular Imaging 45 6 (2018): 1052-1062. https://publons.com/publon/3296345/.
    Published • 10.1007/S00259-017-3918-7
  39. Oliveira, Francisco; Leuzy, Antoine; Castelhano, João; Chiotis, Konstantinos; Hasselbalch, Steen Gregers; Rinne, Juha; Mendonça, Alexandre; et al. "Data driven diagnostic classification in Alzheimer's disease based on different reference regions for normalization of PiB-PET images and correlation with CSF concentrations of Aß species". NeuroImage: Clinical 20 (2018): 603-610. http://dx.doi.org/10.1016/j.nicl.2018.08.023.
    Open access • Published • 10.1016/j.nicl.2018.08.023
  40. Oliveira, F.P.M.; Castelo-Branco, M.. Corresponding author: Castelo-Branco, M.. "Computer-aided diagnosis of Parkinson's disease based on [123I]FP-CIT SPECT binding potential images, using the voxels-as-features approach and support vector machines". Journal of Neural Engineering 12 2 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84924358383&partnerID=MN8TOARS.
    Published • 10.1088/1741-2560/12/2/026008
  41. Oliveira, Francisco; Faria, Diogo Borges; Tavares, João Manuel RS. Corresponding author: Tavares, João Manuel RS. "Automated segmentation of the incus and malleus ossicles in conventional tri-dimensional computed tomography images". Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine 228 8 (2014): 810-818. http://dx.doi.org/10.1177/0954411914546123.
    Published • 10.1177/0954411914546123
  42. Oliveira, F.P.M.; Borges Faria, D.; Campos Costa, D.; Tavares, J.M.R.S.. Corresponding author: Tavares, J.M.R.S.. "A robust computational solution for automated quantification of a specific binding ratio based on [123l]FP-CIT SPECT images". Quarterly Journal of Nuclear Medicine and Molecular Imaging 58 1 (2014): 74-84. http://www.scopus.com/inward/record.url?eid=2-s2.0-84896907071&partnerID=MN8TOARS.
    Published
  43. Oliveira, Francisco; Tavares, João Manuel R. S.. Corresponding author: Tavares, João Manuel R. S.. "Enhanced spatio-temporal alignment of plantar pressure image sequences using B-splines". Medical & Biological Engineering & Computing 51 3 (2012): 267-276. http://dx.doi.org/10.1007/s11517-012-0988-3.
    Published • 10.1007/s11517-012-0988-3
  44. Oliveira, Francisco; Sousa, Andreia; Santos, Rubim; Tavares, João Manuel R.S.. Corresponding author: Tavares, João Manuel R.S.. "Towards an efficient and robust foot classification from pedobarographic images". Computer Methods in Biomechanics and Biomedical Engineering 15 11 (2012): 1181-1188. http://dx.doi.org/10.1080/10255842.2011.581239.
    Published • 10.1080/10255842.2011.581239
  45. Oliveira, Francisco P.M.; Tavares, João Manuel R.S.. Corresponding author: Tavares, João Manuel R.S.. "RECENT METHODS FOR PLANTAR PRESSURE IMAGE REGISTRATION". Journal of Biomechanics 45 (2012): S463. http://dx.doi.org/10.1016/s0021-9290(12)70464-5.
    Published • 10.1016/s0021-9290(12)70464-5
  46. Oliveira, Francisco P.M.; Tábuas, Carolina; Tavares, João Manuel R.S.; Gabriel, Ronaldo; Monteiro, Marco; Moreira, Helena; Faria, Aurélio. "COP DISPLACEMENT RELIABILITY IN MEDIAL-LATERAL DIRECTION IN POSTMENOPAUSAL WOMEN". Journal of Biomechanics 45 (2012): S245. http://dx.doi.org/10.1016/s0021-9290(12)70246-4.
    Published • 10.1016/s0021-9290(12)70246-4
  47. Oliveira, Francisco; Tavares, João Manuel R.S.. Corresponding author: Tavares, João Manuel R.S.. "Medical image registration: a review". Computer Methods in Biomechanics and Biomedical Engineering 17 2 (2012): 73-93. http://dx.doi.org/10.1080/10255842.2012.670855.
    Published • 10.1080/10255842.2012.670855
  48. Sousa, Andreia SP; Santos, Rubim; Oliveira, Francisco; Carvalho, Paulo; Tavares, João Manuel RS. "Analysis of ground reaction force and electromyographic activity of the gastrocnemius muscle during double support". Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine 226 5 (2012): 397-405. http://dx.doi.org/10.1177/0954411912439671.
    Published • 10.1177/0954411912439671
  49. Oliveira, Francisco P.M.; Tavares, João Manuel R.S.; Oliveira, Francisco. Corresponding author: Tavares, João Manuel R.S.. "Registration of plantar pressure images". International Journal for Numerical Methods in Biomedical Engineering 28 6-7 (2011): 589-603. http://dx.doi.org/10.1002/cnm.1461.
    Published • 10.1002/cnm.1461
  50. Oliveira, Francisco; Sousa, Andreia; Santos, Rubim; Tavares, João Manuel R. S.. Corresponding author: Tavares, João Manuel R. S.. "Spatio-temporal alignment of pedobarographic image sequences". Medical & Biological Engineering & Computing 49 7 (2011): 843-850. http://dx.doi.org/10.1007/s11517-011-0771-x.
    Published • 10.1007/s11517-011-0771-x
  51. Oliveira, Francisco P.M.; Pataky, Todd C.; Tavares, João Manuel R.S.. Corresponding author: Tavares, João Manuel R.S.. "Registration of pedobarographic image data in the frequency domain". Computer Methods in Biomechanics and Biomedical Engineering 13 6 (2010): 731-740. http://dx.doi.org/10.1080/10255840903573020.
    Published • 10.1080/10255840903573020
  52. Oliveira, Francisco; Tavares, João Manuel R. S.. Corresponding author: Tavares, João Manuel R. S.. "Novel framework for registration of pedobarographic image data". Medical & Biological Engineering & Computing 49 3 (2010): 313-323. http://dx.doi.org/10.1007/s11517-010-0700-4.
    Published • 10.1007/s11517-010-0700-4
  53. Oliveira, Francisco P. M.; Tavares, Joao Manuel R. S.. Corresponding author: Tavares, Joao Manuel R. S.. "Matching Contours in Images using Curvature Information and Optimization based on Dynamic Programming". IEEE Latin America Transactions 7 6 (2009): 703-712. http://dx.doi.org/10.1109/tla.2009.5419369.
    Published • 10.1109/tla.2009.5419369
  54. Oliveira, Francisco; Tavares, João Manuel R.S.; Pataky, Todd C.. Corresponding author: Pataky, Todd C.. "Rapid pedobarographic image registration based on contour curvature and optimization". Journal of Biomechanics 42 15 (2009): 2620-2623. http://dx.doi.org/10.1016/j.jbiomech.2009.07.005.
    Published • 10.1016/j.jbiomech.2009.07.005
  55. Oliveira, F.P.M.; Tavares, J.M.R.S.. Corresponding author: Tavares, J.M.R.S.. "Matching contours in images through the use of curvature, distance to centroid and global optimization with order-preserving constraint". CMES - Computer Modeling in Engineering and Sciences 43 1 (2009): 91-110. http://www.scopus.com/inward/record.url?eid=2-s2.0-70350382226&partnerID=MN8TOARS.
    Published • 10.3970/CMES.2009.043.091

Intellectual property

Patent
  1. Caramelo, Francisco; Oliveira, Francisco PM; Pereira, Carlos; Ferreira, Nuno; Dias, Miguel; Cruz, Angela; Abrunhosa, Antero; Moreira, Ana Paula. 2021. "NON-INVASIVE SYSTEM FOR MEASURING THE ARTERIAL INPUT FUNCTION FOR PET IMAGING". Portugal.
    Granted/Issued
Activities

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2023 - Current Predicting lung cancer response to radiotherapy based on 18F-FDG PET/CT imaging and machine learning
Supervisor
 Programa de Doutoramento em Engenharia Biomédica (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2023 - Current Comparison of 18F-FDG, 18F-florbetapir and 18F-flortaucipir PET images for predicting the conversion of mild cognitive impairment to dementia
Supervisor
 Mestrado em Engenharia Biomédica e Biofísica (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
2023 - Current Segmentation of grey and white matter regions in [18F]FDG PET imaging using convolutional neural networks
Supervisor
 Engenharia Biomédica (Master)
Universidade Nova de Lisboa, Portugal
2019 - Current The role of amyloid PET/CT dynamic acquisitions in the differential diagnosis of Alzheimer disease and other dementias
Supervisor
 PhD Programme in Biomedical Engineering and Biophysics (PhD)
Universidade de Lisboa Faculdade de Ciências, Portugal
2017 - 2024 Neural complications of type 2 diabetes mellitus and its relation with age-related changes and Alzheimer's disease. A study with functional and structural magnetic resonance imaging
Supervisor
 Doctoral Programme in Health Sciences (PhD)
Universidade de Coimbra Faculdade de Medicina, Portugal
2022 - 2023 Automatic detection and segmentation of malignant lesions in 18F-FDG PET/CT studies using machine learning techniques: application in lymphomas
Supervisor
 Engenharia Biomédica e Biofísica (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
2022 - 2023 Segmentation of Malignant Lesions on [18F]FDG PET/CT Images using Deep Learning Techniques
Supervisor
 Engenharia Biomédica (Master)
Universidade Católica Portuguesa Escola Superior de Biotecnologia, Portugal
2022 - 2023 Automatic detection and segmentation of malignant lesions from [18F]FDG PET/CT images using machine learning techniques: application in lymphomas
Supervisor
 Mestrado em Engenharia Biomédica e Biofísica (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
2021 - 2022 Avaliação do potencial de técnicas de machine learning no diagnóstico diferencial da doença de Parkinson com base em imagem molecular
Supervisor
 Mestrado em Engenharia Biomédica (Master)
Instituto Politécnico de Lisboa Escola Superior de Tecnologia da Saúde de Lisboa, Portugal
2020 - 2022 Influência das especificações EARL1 e EARL2 na quantificação de estudos de PET/CT com gálio-68
Supervisor
 Mestrado em Engenharia Biomédica (Master)
Instituto Politécnico de Lisboa Escola Superior de Tecnologia da Saúde de Lisboa, Portugal
2020 - 2022 Classificação automática de lesões ósseas em imagens cintigráficas usando técnicas de machine learning
Supervisor
 Mestrado em Engenharia Biomédica (Master)
Instituto Politécnico de Lisboa Escola Superior de Tecnologia da Saúde de Lisboa, Portugal
2018 - 2019 Reproducibility Study of Tumor Biomarkers Extracted from Positron Emission Tomography Images with 18F-fluorodeoxyglucose
Supervisor
 Engenharia Biomédica (Master)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
2017 - 2018 Avaliação da influência do tecido adiposo na correção dos fatores físicos que afetam as imagens de CPM: Estudo em fantoma
Supervisor
 Engenharia Biomédica (Master)
Instituto Politécnico de Lisboa Instituto Superior de Engenharia de Lisboa, Portugal
2017 - 2017 Impact of multiple surgeries with associated infection episodes on cognitive dysfunction
Supervisor
 Medicina (Master)
Universidade de Coimbra Faculdade de Medicina, Portugal
2017 - 2017 Diagnóstico diferencial de doenças parkinsónicas com base em dados multimodais de imagem
Supervisor
 Engenharia Biomédica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal
2017 - 2017 Diferenciação de síndromes parkinsónicas recorrendo a imagens PET com 11C-raclopride
Supervisor
 Engenharia Biomédica (Master)
Universidade de Coimbra Faculdade de Ciencias e Tecnologia, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2023 Estudo de Viabilidade da Obtenção de Imagens de Transmissão de Dupla Energia com o uso de Emissores Gama
(Thesis) Main arguer
 João Pedro Miranda Santos (Master)
Universidade de Coimbra, Portugal
2023 Módulo de deteção para determinação da função de entrada arterial em PET
(Thesis) Main arguer
 Laura Simões Ferreira (Master)
Universidade de Coimbra, Portugal
2023 Quantificação do Potencial de Ligação de Biomarcadores de Doenças Neurológicas com Tecnologia easyPET
(Thesis) Main arguer
 Viviana Isabel Oliveira Assunção (Master)
Universidade de Aveiro, Portugal
2021 Relatório para obtenção do Grau de Mestre em Engenharia Biomédica
(Thesis) Arguer
 Nuno Miguel de Almeida Loução (Master)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
2019/04/04 Voxel-Based Dosimetry Using Multimodal Images for Patient-Specific Liver Radioembolization With Yttrium-90 Charged Glass Microspheres
(Thesis) Main arguer
 Paulo Miguel dos Santos Ferreira (PhD)
Universidade de Lisboa Instituto Superior Técnico, Portugal
2018 Numerical modeling of mechanical behavior of cardiomyocytes, using Finite Element Method
(Thesis) Main arguer
 Joana Isabel Pereira Oliveira (Master)
Instituto Politécnico de Lisboa Escola Superior de Tecnologia da Saúde de Lisboa, Portugal
2018 Deteção automática e caracterização da placa aterosclerótica através da imagem ultrassonográfica
(Thesis) Main arguer
 Margarida Maria Gonçalves Cardoso (Master)
Instituto Politécnico de Lisboa Escola Superior de Tecnologia da Saúde de Lisboa, Portugal

Ad Hoc journal article review

Journal title (ISSN) Publisher
2022 - Current Applied Sciences (2076-3417) MDPI
2021 - Current European Radiology (1432-1084) Springer
2021 - Current International Journal of Computer Assisted Radiology and Surgery (1861-6429) Springer
2021 - Current CNS Neuroscience & Therapeutics (1755-5949) John Wiley & Sons Ltd
2020 - Current Physics in Medicine & Biology (0031-9155) IOP Science
2019 - Current Journal of Alzheimer's Disease (1387-2877) IOS Press
2019 - Current Scientific Reports (2045-2322) Springer Nature
2018 - Current EJNMMI Research (2191-219X) Springer
2018 - Current Sensors (1424-8220) MDPI
2017 - Current Journal of Healthcare Engineering (2040-2295) Hindawi
2016 - Current Journal of Neural Engineering (1741-2560) IOP Science
2016 - Current International Journal for Numerical Methods in Biomedical Engineering (2040-7947) John Wiley & Sons Ltd
2016 - Current IEEE Signal Processing Letters (1070-9908) IEEE

Association member

Society Organization name Role
2021 - Current Sociedade Portuguesa de Medicina Nuclear Member