Identification
Personal identification
- Full name
- Rui Miguel Macieira de Faria
Citation names
- Faria, Rui
Author identifiers
- Ciência ID
- 751B-511D-D47A
- ORCID iD
- 0000-0001-6635-685X
- Google Scholar ID
- https://scholar.google.com/citations?user=ubDybpQAAAAJ
Email addresses
- ruifaria@cibio.up.pt (Professional)
- ruifaria@cibio.up.pt (Professional)
- rui.faria@fc.up.pt (Professional)
Addresses
- Campus Agrário de Vairão, Rua Padre Armando Quintas N7, 4485-661, Vairão, Vila do Conde, Portugal (Professional)
- Rua Esteiro de Campanha, n48 A, 4300-174, Porto, Porto, Portugal (Personal)
Websites
- https://rmigueldefaria.wixsite.com/farialab-1 (Scholar)
- https://cibio.up.pt/people/details/rmfaria (Professional)
- https://littorina.group.shef.ac.uk/ (Scholar)
Knowledge fields
- Natural sciences - Biological Sciences - Evolutionary Biology
Languages
Language | Speaking | Reading | Writing | Listening | Peer-review |
---|---|---|---|---|---|
Portuguese (Mother tongue) | |||||
English | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) |
Spanish; Castilian | Intermediate (B1) | Upper intermediate (B2) | Beginner (A1) | Upper intermediate (B2) | Beginner (A1) |
French | Beginner (A1) | Intermediate (B1) | Beginner (A1) | Beginner (A1) | Beginner (A1) |
Education
Degree | Classification | |
---|---|---|
2007
Concluded
|
Biology (Doutoramento)
Universidade do Porto Faculdade de Ciências, Portugal
"Study of evolutionary processes and phylogeography in European species of the genus Alosa, based on molecular markers" (THESIS/DISSERTATION)
|
Approved (only 2 possibilities: approved / failed) |
1999
Concluded
|
Biology (Licenciatura)
Universidade do Porto Faculdade de Ciências, Portugal
"Graduation thesis on Brown trout population genetic using allozymes and microsatellites (Internship thesis report)" (THESIS/DISSERTATION)
|
17 (max 20) after internship - 1st percentile (of the science-technology branch) |
Affiliation
Science
Category Host institution |
Employer | |
---|---|---|
2019/05/01 - Current | Researcher (Research) | Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal |
2018 - 2023 | Visiting Researcher (Research) | The University of Sheffield Department of Animal and Plant Sciences, United Kingdom |
2018 - 2021 | Visiting Researcher (Research) | Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal |
2016/09/01 - 2018/08/31 | Researcher (Research) | The University of Sheffield Department of Animal and Plant Sciences, United Kingdom |
2013/08/01 - 2016/08/31 | Postdoc (Research) | Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2013/08/01 - 2016/08/31 | Postdoc (Research) | Instituto de Biología Evolutiva, Spain |
2007/08/01 - 2013/07/31 | Postdoc (Research) | Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
Instituto de Biología Evolutiva, Spain (...) |
||
2007/08/01 - 2013/07/31 | Postdoc (Research) | Instituto de Biología Evolutiva, Spain |
2001 - 2007 | Research Trainee (Research) | Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
1999 - 2001 | Research Assistant (Research) | Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
Teaching in Higher Education
Category Host institution |
Employer | |
---|---|---|
2024 - Current | Invited Assistant Professor (University Teacher) | Universidade do Porto Faculdade de Ciências, Portugal |
2005 - 2005 | Invited Assistant Professor (University Teacher) | Universidade do Porto Faculdade de Ciências, Portugal |
Projects
Grant
Designation | Funders | |
---|---|---|
2022/01/15 - Current | The role of chromosomal inversions in adaptation and reproductive isolation across the speciation continuum- INVcontinuum
PTDC/BIA-EVL/1614/2021
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Governo da República Portuguesa Ministério da Ciência Tecnologia e Ensino Superior |
2023 - 2026 | Biotic interactions in a changing world - how marine foundation species determine biodiversity across environmental gradients
2022.02887.PTDC
Researcher
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2023 - 2024 | Ancient GEnomics of Speciation and hybridisation
2022.07766.PTDC
Co-Principal Investigator (Co-PI)
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2023 - 2024 | Evolution on our heads: disentangling mechanisms of diversification in human lice
2022.03867.PTDC
Researcher
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2022/04/01 - 2024 | The roles of chromosomal inversions in polymorphism, adaptation and speciation
96513
Researcher
|
Leverhulme Trust
Ongoing
|
2021 - 2023 | EEA grant project "Technical Cooperation for Studying Adaptation to Environmental Change - Adaptchange".
FBR_OC1_68
Principal investigator
Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal
|
EEA Grants
Concluded
|
2019 - 2022 | The contribution of inversion polymorphism to local adaptation and speciation.
2018-03695
Researcher
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
Göteborgs Universitet, Sweden |
Vetenskapsradet
Concluded
|
2016 - 2021 | The evolution of barriers to gene exchange
ERC_2015_AdG_693030 'BARRIERS'
Researcher
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
European Commission
Ongoing
|
2016 - 2021 | Speciation: genital divergence and the evolution of reproductive isolation
2015-05001
Researcher
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
Vetenskapsradet
Ongoing
|
2016 - 2020 | Causes and consequences of mating preferences evolution in wild populations
CGL2016-75482-P
Researcher
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Gobierno de España Ministerio de Economía y Empresa
Ongoing
|
2016/09 - 2018/10 | Chromosomal rearrangements and diversification on environmental gradients (Marie Curie fellowship)
706376
Research Fellow
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
Horizon 2020
Concluded
|
2013 - 2018 | Accelerated evolution in chromosomal rearrangements and speciation in lacertid lizards (Co-PI)
iDiv
Other
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
German Centre for Integrative Biodiversity Research
Concluded
|
2014 - 2016 | Genomic architecture of speciation: the role of chromosomal rearrangements
85685-1
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
VolkswagenStiftung
Concluded
|
2013 - 2016 | THE GENOMIC ARCHITECTURE OF SPECIATION: INSIGHTS FROM SIMULATIONS AND EMPIRICAL DATA ON FLAT PERIWINKLES (postdoc project)
SFRH/BPD/89313/2012
Post-doc Fellow
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2010/04/01 - 2014/01/31 | Gamete Recognition Proteins: the key for cryptic sexual selection?
Post-doc
Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2012 - 2014 | Genomic distribution of nucleotide and gene expression divergence in mammals: the role of chromosomal rearrangements in speciation
Portugal-Germany (DAAD-FCT) bilateral cooperation
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia Deutscher Akademischer Austauschdienst Concluded
|
2011 - 2014 | The paths of parallel evolution and their genetic crossroads
PTDC/BIA-EVF/113805/2009
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2010 - 2014 | The Atlantic Aquatic Resource Conservation Project
AARC – http://aarcproject.org/
Researcher
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
European Commission
Concluded
|
2010/03/01 - 2013/08/31 | Mouse sex ratio distortion
PTDC/BIA-BEC/103440/2008
Post-doc
Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2007 - 2013 | The role of chromosomal rearrangements in adaptation and speciation (FCT postdoc project)
SFRH/BPD/26384/2006
Post-doc Fellow
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
2002 - 2005 | Analysis of micro and macroevolutionary processes in European species of the Alosa genus
POCTI/BSE/41527/2001
PhD Student Fellow
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
1999 - 2001 | Phylogenetic and ecological approach for prioritising areas for conservation and management of Portuguese Brown Trout (Salmo
trutta L.) populations
PRAXIS XXI/P/BIA/10245/1998
Research Technician Fellow
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia
Concluded
|
Contract
Designation | Funders | |
---|---|---|
2021 - 2027 | INVironment - The role of chromosomal rearrangements in adaptation to environmental changes (Research Contract without research
funding)
2020.00275.CEECIND
Researcher
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Fundação para a Ciência e a Tecnologia
Ongoing
|
2021/01/01 - 2025/12/31 | Research Network in Biodiversity and Evolutionary Biology (InBIO)
LA/P/0048/2020
Researcher
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Universidade de Lisboa Instituto Superior de Agronomia, Portugal Fundação Gaspar Frutuoso, Portugal Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal |
Fundação para a Ciência e a Tecnologia
Ongoing
|
2020/01/01 - 2023/12/31 | Research Network in Biodiversity and Evolutionary Biology
UIDB/50027/2020
Researcher
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Universidade de Lisboa Instituto Superior de Agronomia, Portugal Fundação Gaspar Frutuoso, Portugal Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
2020/01/01 - 2023/12/31 | Research Network in Biodiversity and Evolutionary Biology
UIDP/50027/2020
Researcher
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Universidade de Lisboa Instituto Superior de Agronomia, Portugal Fundação Gaspar Frutuoso, Portugal Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal |
Fundação para a Ciência e a Tecnologia
Concluded
|
Other
Designation | Funders | |
---|---|---|
2024 - Current | WinkleWatch: A Community Science Project on Snail Colour
Principal investigator
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
Ongoing
|
2021 - 2021 | BISBAYLITGAP -Detecting gene flow between French and Spanish populations of Littorina species: filling the Biscay Bay gap.
(Assemble Plus)
n. 13460.2
Principal investigator
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
Concluded
|
2020/02/01 - 2020/05/31 | The genetic and evolutionary basis of colour polymorphism in Littorina fabalis - GEBCOL (Assemble Plus)
ECM-018
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
European Marine Biological Resource Centre
Ongoing
|
2014 - 2014 | OBTUSALIS - Genetic differentiation and hybridization between flat periwinkles in Swedish shores (Assemble)
grant agreement no. 227799
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
ASSOCIATION OF EUROPEAN MARINE BIOLOGICAL LABORATORIES.
Concluded
|
2012 - 2012 | Study of genetic and ecological mechanisms involved in the formation of Littorina fabalis ecotypes in Sweden (Assemble)
Grant agreement No. 227799
Principal investigator
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
ASSOCIATION OF EUROPEAN MARINE BIOLOGICAL LABORATORIES.
Concluded
|
2008 - 2011 | Orang-utan genome sequencing consortium
Researcher
Instituto de Biología Evolutiva, Spain
|
Concluded
|
2002 - 2004 | Genetic characterization of Alosa populations from the United Kingdom
PhD Student Fellow
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
Concluded
|
Outputs
Publications
Book chapter |
|
Conference paper |
|
Conference poster |
|
Journal article |
|
Journal issue |
|
Thesis / Dissertation |
|
Translation |
|
Website |
|
Activities
Oral presentation
Presentation title | Event name Host (Event location) |
|
---|---|---|
2025 | Understanding the evolutionary significance of chromosomal inversions: insights from Littorina marine snails (invited speaker) | Lausanne Genomics Days
University of Lausanne (Lausanne, Switzerland)
|
2024 | The evolutionary relevance of chromosomal rearrangements in adaptation and speciation in Littorina marine snails. | Mollusc Genomics 2024.
University of Namur (Namur, Belgium)
|
2024 | Evolution of recombination landscapes. Facilitating adaptation? (invited Speaker) | Evolution of recombination landscapes. Facilitating adaptation?
University of Bern (Bern, Switzerland)
|
2024 | Understanding the evolutionary significance of chromosomal inversions in adaptation and speciation in Littorina marine snails (Invited seminar) | Séminaires d'Écologie et d'Évolution de Montpellier
ISEM (Montpellier, France)
|
2023 | The Stone Raft: using population genomics to understand the evolutionary processes shaping Littorina diversity in Iberian Peninsula | XIII International Symposium on Littorinid Biology and Evolution,
CIBIO (Vila do Conde, Portugal)
|
2023 | The evolutionary significance of chromosomal rearrangements in adaptation and speciation (flash talk) | IV IMPSG - INTERNATIONAL MEETING OF THE PORTUGUESE SOCIETY OF GENETICS
University of Braga (Braga, Portugal)
|
2022 | Solving the mystery of one of the most misidentified marine organism in the world (seminar at MAPAS. CITEXVI, University of Vigo, Spain) | Seminar series
MAPAS. CITEXVI, University of Vigo
|
2022 | Whole-genome sequencing across the intertidal gradient reveals strong reproductive isolation between Spanish Littorina saxatilis ecotypes (SESBE 2022) | VIII SPANISH SOCIETY OF EVOLUTIONARY BIOLOGY CONFERENCE
University of Vigo (Spain)
|
2021 | Presented 18 oral communications (non-invited), including : 2023, XIII ISOLBE, Portugal; 2018. PopGroup51, Bristol, UK; 2017. XII Intern. Symp. on Littorinid Biology and Evolution, Sweden 2012. First Joint Congress Evolution-ESEB, Canada; 2010. Frontiers of Speciation. Evolution of reproductive isolation: models and empirical evidence, Czech Republic; 2007. XII European congress of Ichthyology, Croatia; 2004. European Soc. Evolutionary Biology conference, Poland. Complete list: https://rmigueldefaria.wixsite.com/farialab-1/communications. | Multiple
Multiple
|
2021 | Adaptation and Speciation on the beach: solving the mystery of one of the most misidentified marine organisms in the world (seminar in CE3C, University of Lisbon, Portugal) | Encontros Scientia
CE3C
|
2021 | Adaptation and Speciation on the beach: solving the mystery of one of the most misidentified marine organisms in the world (seminar at Research Centre for Experimental Marine Biology and Biotechnology, Plentzia Marine Station, University of the Basque country, Spain) | seminar series
Research Centre for Experimental Marine Biology and Biotechnology, Plentzia Marine Station, University of the Basque country,
Spain (Spain)
|
2021 | The role of inversions in diversification of Littorina intertidal gastropods (seminar at the University of Bodo, Norway) | seminar series
University of Bodo (Norway)
|
2019/03 | Speciation Genomics (invited - 8 editions from 2012 to 2019) | Programming for Evolutionary Biology Course
Freie University Berlin (Berlin, Germany)
|
2015 | Finding islands of divergence on raising sea levels (invited) | Seminar Series
Museu Nacional de Ciências Naturais (Madrid, Spain)
|
2014 | Genómica e a Origem das Espécies (invited) | II AEICBAS Biomedical Congress. ICBAS, Porto, Portugal
AEICBAS (Porto, Portugal)
|
2014 | Diversification in flat periwinkles: genotypes, phenotypes and processes (invited) | 16th Portugaliae Genetica international conference – Evolution @ interacting levels: from molecules to populations.
IPATIMUP (Porto, Portugal)
|
2012 | The genetic mechanisms of parallel evolution in Littorina fabalis and L. obtusata (invited) | Seminar series
Universidade de Vigo (Vigo, Spain)
|
2012 | Mechanisms of speciation: lessons from aquatic organisms (invited) | Seminar Series
CIIMAR (Porto, Portugal)
|
2011 | How repeatable is evolution? Lessons from marine snails (L. fabalis and L. obtusata) (invited) | Cafe com Sal - seminar series
Seminar at ECIMAT (Marine Sciences Station of Toralla, Univ. Vigo) (Vigo, Spain)
|
2011 | Chromosomal speciation: theoretical models and empirical evidence (invited) | Seminar Series
University of Leipzig (Germany)
|
2011 | Chromosomal speciation: theoretical models, empirical evidence and model organisms (invited) | 14th Portugaliae Genetica international conference – Model Organisms: humans et al.
IPATIMUP (PORTO, Portugal)
|
2007 | Genetic tools for fish conservation (invited) | International Workshop on the Restoration of Fish Populations
LIFE PROJECT SHADS (Dusseldorf, Germany)
|
2007 | Comparative phylogeography of Eurasian shads (Alosa spp.) (invited) | Seminar series
IRTA (Research and Technology Food and Agriculture) (Tarragona, Spain)
|
Supervision
Thesis Title Role |
Degree Subject (Type) Institution / Organization |
|
---|---|---|
2024 - Current | A evolução das subespécies de piolhos (Pediculus humanus capitis e Pediculus humanus humanus) em populações humanas
Supervisor
|
Universidade do Porto Departamento de Biologia, Portugal
|
2022 - 2025 | Postdoc on the project - The role of chromosomal inversions in adaptation and reproductive isolation across the speciation
continuum
Supervisor
|
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
2022 - 2025 | Postdoc in the project "The role of chromosomal inversions in adaptation and reproductive isolation across the speciation
continuum"
Supervisor
|
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
2023 - 2024 | Technician in the project- Evolution on our heads: disentangling mechanisms of diversification in human lice
Supervisor
|
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
2022 - 2024 | Technician in the project - The role of chromosomal inversions in adaptation and reproductive isolation across the speciation
continuum- INVcontinuum
Supervisor
|
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
|
2019 - 2024 | Exploration of inversions in the Rough Perriwinkle (Littorina saxatilis).
Co-supervisor
|
Göteborgs Universitet, Sweden
|
2018 - 2024 | Genomics of ecotype formation: interplay between demographic processes and natural selection
Co-supervisor of Joao Carvalho
|
Biodiversity, Genetics & Evolution (PhD)
Universidade de Lisboa Faculdade de Ciências, Portugal
|
2018 - 2024 | Genomics of ecotype formation: interplay between demographic processes and natural selection
Co-supervisor
|
Universidade de Lisboa Centro de Ecologia Evolução e Alterações Ambientais, Portugal
|
2022 - 2023 | Study of evolutionary processes in intertidal species of the genus Littorina
Supervisor
|
|
2021/10 - 2022 | Shell shape evolution of the marine gastropod Littorina obtusata across an environmental gradient at high latitudes
Supervisor
|
Universidade do Porto Faculdade de Ciências, Portugal
|
2019 - 2020 | Technician fellow on the project "Hybridization between flat periwinkles"
Supervisor of Diana Costa
|
Technician (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2017 - 2018 | Testing for divergent selection on putative chromosomal inversions in Littorina saxatilis
Co-supervisor of Sam Fenton
|
Biology (Master)
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
2013 - 2018 | Accelerated evolution in Chromosomal rearrangements and Speciation in Lacertid lizards
Co-supervisor of Rohit Kolora
|
Bioinformatics (PhD)
Universität Leipzig, Germany
|
2014 - 2016 | Insights into the extent of hybridization between flat periwinkles in the Iberian Peninsula
Supervisor of Diana Costa
|
Master in Biodiversity, Genetics and Evolution (Master)
Universidade do Porto Faculdade de Ciências, Portugal
|
2014 - 2016 | Supervision of a postdoctoral fellow working on “Genomic architecture of speciation: the role of chromosomal rearrangements”
funded by VolkswagenStiftung
Supervisor of Graciela Sotelo
|
Postdoc (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2013 - 2014 | Characterization of environmental parameters across the distribution range of Littorina fabalis ecotypes
Supervisor of Sofia Abrunheiro
|
Internship (Biology Degree) (Scientific initiation)
Universidade do Porto Faculdade de Ciências, Portugal
|
2012 - 2014 | Understanding the evolution of the mitochondrial genome: a comparative genomics approach
Co-supervisor of Andreia Carvalho
|
Master in Biodiversity, Genetics and Evolution (Master)
Universidade do Porto Faculdade de Ciências, Portugal
|
2012 - 2014 | Study on the diversification of flat periwinkles (Littorina fabalis and L. obtusata): insights from genetics and geometric
morphometrics
Supervisor of Joao Carvalho
|
Master in Evolution and Development (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
|
2012 - 2014 | Technician fellow on the project “The paths of parallel evolution and their genetic crossroads”
Supervisor of Graciela Sotelo
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2012 - 2012 | Evolutionary ecology of L. fabalis ecotypes in the Iberian Peninsula
Supervisor of Ana Marçal
|
Programa Da Vinci (4 months research project) (Other)
Universidade de Aveiro, Portugal
|
2011 - 2012 | Technician fellow on the project -The paths of parallel evolution and their genetic crossroads-
Supervisor of Teresa Lagos
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2010 - 2012 | A trial of karyotypic microdissection as an enrichment pathway for next-generation sequencing
Co-supervisor of Tiago Carvalho
|
Master in Biodiversity, Genetics and Evolution (Master)
Universidade do Porto Faculdade de Ciências, Portugal
|
2010 - 2011 | Study of the phylogeographic context of speciation in Littorina obtusata and L. fabalis based on molecular markers
Supervisor of Diana Costa
|
Internship (Biology Degree) (Scientific initiation)
Universidade do Porto Faculdade de Ciências, Portugal
|
2009 - 2010 | Genomic distribution of gene expression differences between primate species: the importance of chromosomal rearrangements
Supervisor of Sandra Neto
|
Universidade do Porto Faculdade de Ciências, Portugal
|
Event organisation
Event name Type of event (Role) |
Institution / Organization | |
---|---|---|
2024 - 2024 | XX Portuguese Society Evolutionary Biology meeting (ENBE), Vila do Conde, Portugal (2024 - 2024)
Conference (President of the Organising Committee)
|
|
2023 - 2023 | XIII ISOLBE: International Symposium on Littorinid Biology and Evolution. Vila do Conde, Portugal (2023 - 2023)
Conference (President of the Organising Committee)
|
Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal |
2022 - 2023 | WORKSHOP on Eco-evolutionary dynamics during environmental change (2022 - 2023)
Workshop (President of the Organising Committee)
|
|
2019 - 2019 | Co-organization of the annual conference of the Portuguese Society for Evolutionary Biology (2019 - 2019)
Conference (Co-organisor)
|
Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal |
2018 - 2018 | Marine Evolution conference, Strömstad, Univ. of Gothenburg, Sweden. Organized a symposium on Marine Speciation (2018 - 2018)
Symposium (Other)
|
Göteborgs Universitet, Sweden |
2018 - 2018 | Organization of the outreach initiative "Speciation at your beach" (we presented the local L. saxatilis ecotypes to people
visiting a rocky beach in Thorwnick UK, aiming to stimulate their evolutionary thinking) (2018 - 2018)
Exhibition (President of the Organising Committee)
|
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom |
2017 - 2018 | Co-organizer of the "Ecology, Evolution & Environment" seminar series. University of Sheffield, UK. (2017 - 2018)
Seminar (Co-organisor)
|
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom |
2012 - 2017 | Co-organization of “Programming for Evolutionary Biology” extended course (five editions) held at the Univ. of Leipzig, Germany
(http://evop.bioinf.uni-leipzig.de/?page_id=11) (2012 - 2017)
Workshop (Co-organisor)
|
Universität Leipzig, Germany |
2012 - 2016 | Creator of the Summer School/Course "Programming for Evolutionary Biology" and co-organizer of the 5 first editions (2012-2016) (2012 - 2016)
Workshop (Co-organisor)
|
Universität Leipzig, Germany |
2015 - 2015 | Organization of a Symposium "Charting the genomic landscape of speciation" at the European Society for Evolutionary Biology
(ESEB) conference, Lausanne, Switzerland (2015 - 2015)
Symposium (Co-organisor)
|
Universite de Lausanne, Switzerland |
2015 - 2015 | Organization of the Conference: “Programming for Evolutionary Biology (PEB 2015)”, CIBIO, Portugal (2015 - 2015)
Conference (President of the Organising Committee)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2013 - 2013 | Organization of the symposium "Genomic Islands: their role in adaptation and speciation" at ESEB 2013. Lisbon, Portugal (2013 - 2013)
Symposium (Co-organisor)
|
Universidade de Lisboa Faculdade de Ciências, Portugal |
2013 - 2013 | Organization of the international conference: “Advances in Ecological Speciation”. CIBIO, Portugal (2013 - 2013)
Conference (President of the Organising Committee)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2011 - 2013 | Organiser of the weekly seminar series in Biodiversity and Evolution. CIBIO, Porto. (2011 - 2013)
Seminar (Co-organisor)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2010 - 2012 | Founder and main organizer of the “Genomics Gang”, weekly meeting discussions in Genomics. CIBIO, Porto. (2010 - 2012)
Meeting (President of the Organising Committee)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2011 - 2011 | Organizer the "First-like” - Faculty Institutes for Reforming Science Teaching (FIRST) IV Workshop" at CIBIO, Portugal (2011 - 2011)
Workshop (Other)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2011 - 2011 | Host organizer “The Bioinformatics Roadshow - Porto” workshop at CIBIO, Portugal (in collaboration with the European Bioinformatics
Institute (EMBL-EBI)) (2011 - 2011)
Workshop (Other)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2010 - 2011 | Organizer of the student seminar series (for MSc and PhD students). CIBIO, Porto (2010 - 2011)
Seminar (Co-organisor)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2010 - 2010 | Organization of the international conference "Trends in Biodiversity and Evolution”. CIBIO, Portugal. (2010 - 2010)
Conference (President of the Organising Committee)
|
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2009 - 2009 | Participation in the organisation of the Barcelona Biomedical Research Park’s (PRBB) open day (Barcelona, Spain) dedicated
to Charles Darwin. (2009 - 2009)
Exhibition (Member of the Organising Committee)
|
Parc de Recerca Biomèdica de Barcelona, Spain |
2008 - 2008 | Organization of the “Introduction to database querying” workshop. (2008 - 2008)
Workshop (President of the Organising Committee)
|
Instituto de Biología Evolutiva, Spain |
2008 - 2008 | Participation in the organization of Scientific Cafes (scientific discussions held in Barcelona's Cafe). Organised by PhD
students and Postdocs of the “Science Meets Society” from PRBB, Spain. (2008 - 2008)
Round table (Member of the Organising Committee)
|
Centre de Regulació Genòmica, Spain |
Event participation
Activity description Type of event |
Event name Institution / Organization |
|
---|---|---|
2024 - 2024 | Small scientific demonstration (hands on) about scientists in the pre-school (children from 3 to 5 years old) from APPC, Gondomar. | |
2023 - 2023 | Small scientific demonstration (hands on) about ocean acidification for children-teenagers from APPC, Gondomar. | |
2023 - 2023 | Small talk about scientists in the elementary school (children from 6 to 7 years old) at Escola da Arroteia, Valbom, Gondomar. | |
2022 - 2022 | ESEB Progress Meeting on Disentangling neutral versus adaptive evolution in chromosomal inversions (workshop to prepare a
target review in JEB)
Meeting
|
ESEB Progress Meeting on ‘Disentangling neutral versus adaptive evolution in chromosomal inversions’
Göteborgs Universitet, Sweden
|
2022 - 2022 | Participation Showcase/Workshop for children at Parque Biológico de Gaia, Escola de Ciência Viva, Gaia, Portugal (about the
biodiversity in rocky shores)
Exhibition
|
|
2022 - 2022 | Showcase for children between 11 and 13 years old in the school “Agrupamento de Escolas Dom Pedro IV”, Mindelo about the ocean
biodiversity, evolution and threats), Vila do Conde (Hands on).
Exhibition
|
|
2019/09 - 2021/03 | Translation of the subtitles of a scientific animated video on speciation on the beach
Other
|
Outreach
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
2021 - 2021 | Participation on the Europeans Researchers Night initiative named "Science in the Castle" at Forte de S. João Baptista, Porto,
Portugal (introduction to the origin of species using marine snails as models)
Exhibition
|
|
2021 - 2021 | Small scientific demonstration (hands on) about ocean acidification in the pre-school (kids of 5 years old) from APPC, Gondomar. | |
2019 - 2019 | Invited talk at Parque Biologico de Gaia (Escola Ciencia Viva - Conversa com Cientista) where I explained my research to a
kids from elementary school
Seminar
|
Parque Biologico de Gaia (Escola Ciencia Viva) |
2018 - 2018 | Contribution to the Evolution Letters blog about one of our manuscripts in Littorina saxatilis: "Speciation on the beach:
solving the mystery of the most misidentified marine organism in the world"
Other
|
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
2017 - 2018 | Discovery night at the Animal and Plant Sciences Department, University of Sheffield. (activities about adaptation using Littorina
saxatilis as model)
Exhibition
|
Discovery night
The University of Sheffield Department of Animal and Plant Sciences, United Kingdom
|
2016 - 2016 | Participation in the initiative "AMBIENTAR-SE" (invited speaker), where I discussed the movie "The age of stupid" and the impact of climate change (Organized by Vento Norte, Famalicao, Portugal). | AMBIENTAR-SE: The age of stupid
Vento Norte (ONG), Portugal
|
2013 - 2014 | Participation in the initiative Ciencia Viva in Summer under the topic: "evolution in colours", which intended to foster the
understanding about the process of natural selection and its contribution to the emergence of new species
Exhibition
|
Ciencia Viva in Summer
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2013 - 2013 | Invited talk at Serralves (Modern art museum, Porto, Portugal) within the outreach initiative "Cafe com Ciencia" (coffee with
science) where I explained my research to a general audience
Other
|
Cafe com Ciencia
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2012 - 2013 | Participation in the initiative "A book about evolution". Edited by Rita Campos (CIBIO/InBIO) and funded by the European Society
for Evolutionary Biology. Educational book in a Q&A format about evolution (http://umlivrosobreevolucao.blogspot.pt/). Role:
member of the jury and coauthor of one chapter.
Other
|
A book about evolution
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
|
2011 - 2011 | Invited Lecture at Infante D. Henrique¿ for high school students (Braga, Portugal) on the topic: Scientific method. | Scientific method
Infante D. Henrique , Portugal
|
Jury of academic degree
Topic Role |
Candidate name (Type of degree) Institution / Organization |
|
---|---|---|
2024 | Member of the thesis evaluation committee of the PhD student Paulo Pereira. University of Porto, Portugal.
(Thesis) Arguer
|
Paulo Pereira (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
|
2024 | Member of the thesis evaluation committee (main opponent) of the master student João Ferreira. University of Porto, Portugal
(Thesis) Main arguer
|
João Ferreira. (Master)
Universidade do Porto Departamento de Biologia, Portugal
|
2022 | Member of the thesis evaluation committee of the PhD student Nina Séren. University of Porto, Portugal.
(Thesis) Arguer
|
Nina Séren (PhD) |
2022 | Member of the thesis evaluation committee (main opponent) of the master student Bernardo Lima. University of Porto, Portugal.
(Thesis) Main arguer
|
Bernardo Lima (Master) |
2022 | Member of the thesis evaluation committee (main opponent) of the master student João Souto. University of Porto, Portugal
(Thesis) Main arguer
|
João Souto (Master) |
2018 | Causes of colour polymorphism in natural populations of Littorina fabalis
Thesis Member
|
Daniel Estevez Barcia (member of the monitoring committee) (PhD)
Universidade de Vigo - Campus Lagoas Marcosende, Spain
|
2018 | Análisis genético de los polimorfismos morfológico y cariológico en poblaciones gallegas de Nucella lapillus (L) (member of
the monitoring committee)
Thesis Member
|
Jonathan Fernández Rodríguez (PhD)
Universidade de Vigo - Campus Lagoas Marcosende, Spain
|
2016 | Hybridization signals in Fucus diversification
(Thesis) Main arguer
|
Susana Almeida (Master)
Universidade do Porto Faculdade de Ciências, Portugal
|
2014 | Understanding the impact of chromosomal inversions on the evolution of the human genome (main examiner)
(Thesis) Main arguer
|
João Alves (PhD)
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
|
2014 | Consequences of chromosome structure polymorphism in sexual populations (main examiner)
(Thesis) Main arguer
|
Maria Silva (Master)
Universidade de Lisboa Faculdade de Ciências, Portugal
|
2013 | Identificación de factores de la anadromía en trucha (Salmo trutta) y su aplicación a la conservación
(member of the committee)
Thesis Member
|
Marco Rius (PhD)
Universidade de Vigo - Campus Lagoas Marcosende, Spain
|
2012 | The genetic basis of lifespan in Drosophila americana
(Thesis) Main arguer
|
Helder Henrique Ribeiro Rocha (Master)
Universidade de Aveiro, Portugal
|
2011 | Assessing domestication centers using mtDNA
(Thesis) Main arguer
|
Rui Oliveira (Master)
Universidade do Porto Faculdade de Ciências, Portugal
|
2009 | Insights into the role of differential gene expression on the ecological adaptation of the snail Littorina saxatilis
(member of the committee)
Thesis Member
|
Mónica Martínez-Fernández (PhD)
Universidade de Vigo, Spain
|
Association member
Society Organization name | Role | |
---|---|---|
2005 - Current | European Society for Evolutionary Biology | Associate |
2024 - 2026 | Portuguese Association for Evolutionary Biology (President) | President |
2023 - 2024 | Portuguese Association for Evolutionary Biology (Vice-President) | Vice-President |
2019 - 2024 | Genetics Society | Regular member |
2011 - 2024 | Portuguese Society for Evolutionary Biology | Associate |
2011 - 2012 | Portuguese Society for Evolutionary Biology (founder and secretary) | Founder and Secretary |
Conference scientific committee
Conference name | Conference host | |
---|---|---|
2024 - 2024 | Member of the scientific committee of the XX ENBE conference | CIBIO |
2023 - 2023 | XIII ISOLBE conference | BIOPOLIS-CIBIO |
2023 - 2023 | XIX ENBE conference | ISA |
2022 - 2022 | TiBE 2022 - THE BIOLOGY OF COLOUR | BIOPOLIS-CIBIO |
2019/10 - 2019/10 | XV conference of the Portuguese Society for Evolutionary Biology | CIIMAR |
2015 - 2015 | XI conference of the Portuguese Society for Evolutionary Biology | Faculdade de Ciencias e Tecnologia da Universidade Nova de Lisboa |
2013 - 2013 | IX conference of Portuguese Society for Evolutionary Biology | Instituto Gulbenkian de Ciencia |
2011 - 2011 | VII conference of the Portuguese Society of Evolutionary Biology | Universidade de Coimbra |
Course / Discipline taught
Academic session | Degree Subject (Type) | Institution / Organization | |
---|---|---|---|
2012 - Current | Lecturer on “Phylogenomics" - Course “Programming for Evolutionary Biology”, University of Leipzig, Germany. | Course ¿Programming for Evolutionary Biology | Universität Leipzig, Germany |
2024 - 2025 | Human Biology - Faculty of Sciences University of Porto (invited Assistant Professor) | (Bacharelato) | Universidade do Porto Faculdade de Ciências, Portugal |
2015 - 2016 | Lecturer on the Course on “Phylogeography, Population Genetics and Genomics” for PhD students of the PGCD (Graduate Programme Science for Development) at the University of Cabo Verde, Praia, Cabo Verde (2 editions) | Phylogeography, Population Genetics and Genomics (1 week course) (Doctor) | Universidade de Cabo Verde, Cape Verde |
2015 - 2015 | Lecturer on "Population Genomics without big funding - Course “Programming for Evolutionary Biology”, University of Leipzig, Leipzig, Germany | Course ¿Programming for Evolutionary Biology | Universität Leipzig, Germany |
2014 - 2014 | Lecturer on Population Genomics - Course Programming for Evolutionary Biology (special edition in Colombia) | Course ¿Programming for Evolutionary Biology | Universidade Nacional de Colombia, Colombia |
2013 - 2013 | Lecturer on High throughput sequencing (developments and applications). Course: Molecular methods in the analysis of biological diversity of the MSc on Biodiversity and Genetic Resources at CIBIO, University of Porto, Portugal | Molecular methods in the analysis of biological diversity (1 week course) (Mestrado) | Universidade do Porto Faculdade de Ciências, Portugal |
2008 - 2008 | Lecturer on “Introduction to database querying” - workshop on “Ensemble and Biomart” at Pompeu Fabra University, Barcelona, Spain. | Introduction to database querying” workshop (1,5 days duration) | Universitat Pompeu Fabra, Spain |
2004 - 2006 | Teaching assistant of Molecular methods applied to the analysis of biological diversity in the MSc on Biodiversity and Genetic Resources at CIBIO, University of Porto, Portugal (3 editions) | Molecular methods applied to the analysis of biological diversity (Mestrado) | Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal |
2005 - 2005 | Lecturer on Genetics at the Faculty of Sciences of the University of Porto, Portugal (1 semester) | Genetics (Licenciatura) | Universidade do Porto Faculdade de Ciências, Portugal |
Journal scientific committee
Journal title (ISSN) | Publisher | |
---|---|---|
2019/03/01 - Current | Heredity (Associate Editor) | Springer Nature |
2019/06 - 2020 | Journal of Evolutionary Biology. Guest editor of a special issue on Speciation in Marine Environments | |
2011 - 2012 | International Journal of Ecology. Guest co-editor of a special issue on Ecological Speciation |
Other jury / evaluation
Activity description | Institution / Organization | |
---|---|---|
2007 - Current | Ad hoc reviewer for the following journals: Evolution; Heredity; Conservation Genetics; Molecular Ecology; Biological Journal of the Linnean Society; J. of Molluscan Studies; Trends in Ecology & Evolution; Nature Communications; Nature Ecology and Evolution; PNAS; Frontiers in Genetics; Proceedings of the Royal Society B: Biological Sciences; J. of Heredity; Molecular Phylogenetics & Evolution; BMC Evolutionary Biology; J. of Applied Ecology; Marine Biology; Canadian J. Fisheries; J. Fish Biology; Plos Genetics; Journal of Evolutionary Biology,etc | |
2024 - 2024 | Jury member of the prize Maynard Smith from ESEB | European Society for Evolutionary Biology, Germany |
2023 - 2023 | Reviewer of a research project for the Polish National Science Centre | Polish National Science Centre, Poland |
2022 - 2022 | Reviewer of a research project for the Leverhulme Trust, United Kingdom | |
2022 - 2022 | Reviewer of a research project for the ERC Starting Grant, European Commission | |
2022 - 2022 | Reviewer for the Czech Science Foundation | Grantová agentura Ceské republiky, Czech Republic |
2021 - 2021 | Reviewer of a research project for the Swiss National Science Foundation (Eccellenza programme) | |
2020 - 2020 | Member of the Juri that evaluated the candidates of the PhD BYT program at the Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Portugal. | Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal |
2014 - 2015 | Reviewer of a research project for the Polish National Science Centre | Polish National Science Centre, Poland |
2013 - 2013 | Reviewer of a research project for the Czech Science Foundation | Grantová agentura Ceské republiky, Czech Republic |