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My name is Ricardo Manuel Fernandes Santos. I have a degree in Biology (University of Aveiro, UA, 2017) and a master's degree in Cellular and Molecular Biology (Faculty of Sciences of the University of Porto, FCUP, 2019). I was a Private tutor in Bússola Dinâmica Ass. (Biology and Geology) and a R&D Freelancer for FI-GROUP (2021 and 2023). I was also a technical consultant at FI-GROUP (R&D) for 9 months (2021-2022). I participated in 7 events and received 2 honors for my work as a Master's representative and my presence at the New England Biolabs Workshop (USA). I have expertise in the area(s) of Natural sciences (Biological Sciences, Molecular Biology, Microbiology, Mycology, Plant Biology, Biotechnology, and Agriculture) and Exact Sciences (Bioinformatics). I am a very enthusiastic scientist passionate about the study of life, especially microorganisms. During my degree, I was a volunteer at The Laboratory of Molecular Biotechnology, LBM (CESAM-UA) and my job was to detect Vibrio tapetis, Perkinsus and Minchinia tapetis in mollusks - Ruditapes decussatus and Venerupis corrugata - via DNA extraction and PCR analysis. I also helped in another project, in the same laboratory, specifically, the growth of multi-resistant bacteria isolated from hospitals, antibiotic resistance analysis by antibiogram, bacteria platting, and CFU count. My annual wet lab work (a curricular unit to finish my degree), focused on the production of Staphylococcus aureus biofilms and the evaluation of antimicrobial compounds (Laboratory of Molecular Biotechnology, LBM - UA). Also, I presented a poster at the XIII Aquaculture Seminary (Setúbal, 2017), named "The use of macroalgae extracts as a preventive agent against Vibrio spp. in aquaculture" with Fábio Mota, as authors. In my master's degree, I had the chance to elaborate on a complex work using bioinformatics tools that culminated in a report named "New DNA signatures as molecular tools for Methicillin-Resistant Staphylococcus aureus detection and strain differentiation in hospital environment". Furthermore, in my dissertation, I carried out genotoxicity tests on Saccharomyces cerevisiae, using the comet assay, to highlight the possible effects of effluents from abandoned uranium mines (a collaboration between UA and FCUP). Throughout my academic career, I managed to take part in several workshops (highlighting the Molecular Biology and Bioinformatics Workshop in Boston (USA) and advanced courses that allowed me to work with different microorganisms, contributing to my experience in asepsis techniques, accommodation with the laboratory routine procedures and instruments, protocol optimization, as well as the production of culture media, microorganism culture handling, and protein extraction. All these opportunities led to my ability to perform database research, and statistical and genomic analysis using bioinformatics tools. I am currently a Ph.D. student at Nova School of Science and Technology in collaboration with the University of Manchester and the Imperial College London (UK): Investigating virus-host interactions in the killer yeast system.
Identification

Personal identification

Full name
RICARDO MANUEL FERNANDES SANTOS
Date of birth
1992/01/20
Gender
Male

Citation names

  • Fernandes-Santos, Ricardo

Author identifiers

Ciência ID
7914-2B37-F49C
ORCID iD
0000-0003-1444-350X

Email addresses

  • rsantos.bcm@gmail.com (Professional)
  • ricardosantos.bio@gmail.com (Personal)

Telephones

Mobile phone
  • 912844785 (Personal)

Addresses

  • Rua Doutor Orlando de Oliveira, nº5 - 1º direito, 3800-004, Aveiro, Glória e Vera Cruz, Portugal (Personal)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Molecular Biology
  • Natural sciences - Biological Sciences - Biology
  • Exact Sciences - Computer and Information Sciences - Bioinformatics
  • Natural sciences - Biological Sciences - Microbiology
  • Natural sciences - Biological Sciences - Plant sciences
  • Natural sciences - Biological Sciences - Mycology
  • Natural sciences - Biological Sciences - Virology
  • Agrarian Sciences - Agriculture, Forestry and Fisheries

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2020/05 - 2020/06/08
Concluded
Isolated Curricular Unit - "Molecular Bioinformatics " (2 ECTS) (Outros)
Major in Bioinformatics
Universidade do Porto Faculdade de Medicina, Portugal
19
2019
Concluded
Biologia Celular e Molecular (Mestrado)
Major in Sem especialização
Universidade do Porto Faculdade de Ciências, Portugal
"The Yeast Comet assay: a study to optimize the technique for the evaluation of DNA damage caused by the exposure to uranium mine effluents" (THESIS/DISSERTATION)
18/20
2014/09/18 - 2017/07/05
Concluded
Biology (Licenciatura)
Universidade de Aveiro, Portugal
"Effects of Lichenicidin in Staphyloccus aureus biofilms" - Research project (1 year)" (THESIS/DISSERTATION)
16/20
2007 - 2010/07/08
Concluded
Sciences and Technology (Ensino secundário)
Externato Álvares Cabral, Portugal
185
Affiliation

Positions / Appointments

Category
Host institution
Employer
2021/07/13 - 2022/06/01 R&D Technical Consultant FI-GROUP, Portugal

Others

Category
Host institution
Employer
2021/02/01 - 2023/05/31 Freelancer - R&D report writting FI-GROUP, Portugal
2018/05 - 2022/06/01 Private tutor Bússola Dinâmica, Portugal
Projects

Grant

Designation Funders
2022/06 - Current Investigating virus-host interactions in the killer yeast system and its biotechnological and health applications
2021.09335.BD
Fundação para a Ciência e a Tecnologia
Outputs

Publications

Conference poster
  1. Fernandes-Santos, Ricardo. "The use of macroalgae extracts as a preventive agent against Vibrio spp. in aquaculture". Paper presented in XIII Seminário da Associação Portuguesa de Aquicultura, 2017.
Thesis / Dissertation
  1. Fernandes-Santos, Ricardo. "The Yeast Comet assay: a study to optimize the technique for the evaluation of DNA damage caused by the exposure to uranium mine effluents". Master, Universidade do Porto Faculdade de Ciências, 2019. https://repositorio-aberto.up.pt/handle/10216/124599.

Other

Research technique
  1. "Effects of Lichenicidin in Staphylococcus aureus biofilms" - Degree "thesis" from an annual curricular unit: "Research" - Score 20/20 - 2017. Researcher. Fernandes-Santos, Ricardo.
    Researcher
  2. "New DNA signatures as molecular tools for MRSA detection and strain differentiation in hospital environment" - Using In-silico tools such as EDGAR, SEDA, MEGA and Blast, different candidate markers were selected to elaborate an evolutionary tree. This study provided an S. aureus exclusive gene: nuc1 (thermonuclease). - Curricular unit: Molecular Evolution - 2018. Researcher. Fernandes-Santos, Ricardo.
    Researcher
Activities

Event participation

Activity description
Type of event
Event name
Institution / Organization
2021/03/30 - 2021/03/30 The workshop focus on the scientific publishing world, editorial backgrounds and roles, and how to choose the best journal for publishing science and what editors look for in a paper
Conference
International Younger Chemists Network - Scientific Writing and Publishing
2021/02/28 - 2021/02/28 Bioinformatics Data Analysis Workshop - Bioinformatics Database Wrangling & Research: Investigating different databases, search data, manipulating DNA and amino acid sequences. Exploring algorithms.
Workshop
Bioinformatics Data Analysis Workshop
BDG LifeSciences (OPC) Pvt, Ltd., India
2021/02/25 - 2021/02/25 Transcriptomics 2-hour workshop. - Use of different software to perform transcriptomics analysis and how to ensemble genomes.
Workshop
Transcriptomics 2-hour workshop
BDG LifeSciences (OPC) Pvt, Ltd., India
2020/10/29 - 2020/10/29 Learning PyMol - Exploring PyMol features and how to use them.
Workshop
Course/Lecture- Learning PyMol
Universidade do Porto Faculdade de Ciências, Portugal
2020/02/20 - 2020/02/20 Seminar about plant and animal investigation, abiotic stress (contamination, climate changes, etc). Different investigators/professors invited to share their research, results and contribute to new applications in agricultural/plant sciences.
Seminar
"Fórum de Stresses Abióticos: das Contaminações dos Solos às Alterações Climáticas"
Universidade do Porto Faculdade de Ciências, Portugal
2018/07/22 - 2018/08/04 A Two-week long course that covered in-depth DNA cloning, gene expression analysis, DNA sequencing (including NextGen and RNA-seq), genomics, bioinformatics, CRISPR/Cas9, RNA interference, PCR and quantitative PCR, protein expression systems and proteomics. Hands-on techniques used in gene expression analysis including microarray analysis, RNAi and quantitative RT-PCR, bioinformatics and genomics and proteomics.
Workshop
"New England Biolabs Molecular Biology Summer Workshop"
Smith College, United States
2018/07/16 - 2018/07/20 Evaluation of oxidative stress in eukaryotic and prokaryotic samples; - Metabolic analysis of stress vs control samples (metabolomics); - Quantification of oxidative markers: LP, GST, SOD, CAT
Workshop
"Integrative approaches to perceive responses of organisms to environmental challenges"
Universidade de Aveiro Departamento de Biologia, Portugal
2018/03/10 - 2018/03/11 Introduction to R's concept, functions and applications
Workshop
"Short Course - Introdução à linguagem de programação R - 2ª edição"
Universidade de Lisboa Faculdade de Ciências, Portugal
2017/09/19 - 2017/09/19 Meeting for students and guests in Functional Biology and Plant Biotechnology with lectures from the field
Meeting
"1º Encontro em Biologia Funcional e Biotecnologia de Plantas"
Universidade do Porto Faculdade de Ciências, Portugal
2017/04/06 - 2017/04/06 Conference about animated molecular biology, applications and how to use proper software to modulate molecular interactions/systems.
Conference
"Animated Molecular Biology by Janet Iwasa"
Universidade de Aveiro Departamento de Biologia, Portugal
2015/10/06 - 2015/10/06 Conference regarding New Horizons mission, Pluto's new discoveries and physics involved in astronomy.
Conference
"Reaching for New Horizons with Alice Bowman"
Universidade de Aveiro Departamento de Física, Portugal

Association member

Society Organization name Role
2023/08 - Current Biochemistry Society (United Kingdom) Member
2017/09 - Current Ordem dos Biólogos Graduate Member

Committee member

Activity description
Role
Institution / Organization
2017/09/01 - 2019/11/19 Member of the Monitoring Committee of the Master's degree in Cell and Molecular Biology: supervising class reunions, student and professor's evaluation, course/discipline suggestions, dissertation class coordinator
Member
Universidade do Porto Faculdade de Ciências, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2018/05 - Current Private tutoring - Biology and Geology as well as Physics/Chemistry Sciences and Technology (Ensino secundário) Bússola Dinâmica, Portugal
Distinctions

Award

2022 PhD Grant - Maria de Sousa
Fundação para a Ciência e a Tecnologia, Portugal

Title

2017 Delegate of the Monitoring Committee for the Master's degree in Cell and Molecular Biology
Universidade do Porto Faculdade de Ciências, Portugal

Other distinction

2018 First Portuguese Student to enroll the New England Biolabs' workshop
Smith College, United States