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For her PhD, Dr. Garcia-Santamarina joined Professor Elena Hidalgo laboratory [University Pompeu Fabra (Barcelona)] where she worked on mechanisms of oxidative stress signaling and toxicity in fission yeast. There, she focused on understanding how oxidative stress triggers signaling cascades, how cells cope with the excess of oxidants, and which are their toxic effects in proteins, using the fission yeast as a model organism. After her PhD, she joined the laboratory of Professor Dennis J. Thiele at Duke University (USA) for her first postdoc. In the Thiele lab, she worked with a human fungal pathogen, Cryptococcus neoformans, in a fungal pathogen-host interface context. Her postdoc focused on understanding how C. neoformans keeps metal homeostasis during infection. The host immune system uses transition metals, essential for all living organisms but toxic when excess, as a first line of defense against pathogens [both metal deprivation (“nutritional immunity”) and metal bombardment (toxicity)]. As part of her postdoctoral work, she identified the regulatory mechanisms important for C. neoformans to thrive in environments that rapidly fluctuate in copper concentrations, such as within the host, and characterized two novel proteins with roles in copper detoxification and copper import, respectively, which are fungal virulence determinants. She moved to EMBL (Heidelberg) in 2018, for a second postdoc, with a prestigious Interdisciplinary Marie Curie fellowship (EIPOD). At EMBL, she had shared appointment in the laboratories of Dr. Athanasios Typas, Dr. Kiran R. Patil and Prof. Dr. Peer Bork, where she became an expert in the microbiome field. There, she optimized an in vitro microbiomics platform to answer whether bacterial members of the gut microbiota behave the same against external perturbations (drugs) when they are alone or as part of a community. By comparing the species' behavior in isolation and in the community, she discovered that frequently emergent phenotypic traits are only visible in the community context. She followed up these with metabolomics and in-depth molecular biology and biochemistry experiments to dissect how a particular drug becomes inactive in microbial consortia. In toto, she uncovered that a combination of drug metabolism, drug bioaccumulation and interspecies interactions are the primary drivers of microbial community traits. As a new group leader at ITQB Nova, Dr. Garcia-Santamarina research goal is to deepen into the mechanisms of gut microbial metabolism at the gene and strain level in a competitive environment, namely other gut microbes and host cells. Gut microbial metabolism has developed to take advantage of any metabolite as a potential energy source, and therefore is highly hydrolytic and reductive, mostly relying on metalloenzymes especially suited for electron transfer reactions in anaerobiosis. Thus, in the case of the gut microbiota, metalloenzymes are involved in carbohydrate degradation, pathogen colonization resistance, vitamins and cofactors biosynthesis, reductive amino acid metabolism, or xenobiotics metabolism. She plans to combine her expertise in the metal’s biology field with her knowledge in the microbiome field to set-up experimental pipelines that lead to an understanding of the role of metals in driving gut microbial metabolism and its implications in human health and disease, e.g. inflammatory diseases, cancer, aging, or genetic diseases that course with host metal overloading or defects.
Identification

Personal identification

Full name
Sarela Garcia Santamarina

Citation names

  • Garcia-Santamarina, Sarela

Author identifiers

Ciência ID
7A13-8007-7841
ORCID iD
0000-0002-0611-7918

Email addresses

  • sarela.santamarina@itqb.unl.pt (Professional)

Telephones

Telephone
  • (+351) 214469 Ext.: 314 (Professional)

Addresses

  • ITQB NOVA, Av. da Republica, 2780-157, Oeiras, Oeiras, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences

Languages

Language Speaking Reading Writing Listening Peer-review
Spanish; Castilian (Mother tongue)
Galician (Mother tongue)
Catalan Advanced (C1) Proficiency (C2) Advanced (C1) Proficiency (C2)
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
German Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Education
Degree Classification
2008/01/01 - 2013/06/14
Concluded
Biomedicine (Doctor of Philosophy)
Universitat Pompeu Fabra, Spain
"Control of redox homeostasis: environmental and genetic regulation of oxidative protein damage in Schizosaccharomyces pombe" (THESIS/DISSERTATION)
2006/09/25 - 2007/09/14
Concluded
Molecular Biology of Infectious Diseases (Master)
London School of Hygiene & Tropical Medicine, United Kingdom
"Characterization of a PHD-finger acetyltransferase in Trypanosoma brucei" (THESIS/DISSERTATION)
2002/06/28 - 2006/05/08
Concluded
Chemical Pathologist (Título de especialista)
Hospital Universitari de Bellvitge, Spain
2005/01/15 - 2005/06/18
Concluded
International Cooperation Agent (120 h) (Postgraduate Certificate)
Universitat Politècnica de Catalunya, Spain
2003 - 2004
Concluded
Biochemistry and Molecular Biology (DEA)
Universitat Autònoma de Barcelona, Spain
"Inflammatory bowel disease and apoptosis: Caspase-3 activity determination in patients with Crohn’s disease and ulcerative colitis" (THESIS/DISSERTATION)
2003 - 2004
Concluded
Statistical Analysis in Biomedicine (280 h) (Postgraduate Certificate)
Universitat Autònoma de Barcelona, Spain
1996/09/01 - 2001/06/30
Concluded
Chemistry (Bachelor)
Major in Organic Chemistry
Universidade de Santiago de Compostela, Spain
"Solid phase synthesis of peptides and depsipeptides" (THESIS/DISSERTATION)
Affiliation

Science

Category
Host institution
Employer
2021/10/01 - Current Auxiliary Researcher (Research) Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2018/05/15 - 2021/08/31 Postdoc (Research) European Molecular Biology Laboratory, Germany
European Molecular Biology Laboratory, Germany
2013/11/01 - 2018/04/15 Postdoc (Research) Duke University, United States
2008/01/01 - 2013/07/31 Research Trainee (Research) Universitat Pompeu Fabra, Spain
Universitat Pompeu Fabra, Spain

Others

Category
Host institution
Employer
2002/06/28 - 2006/05/08 Chemical Pathologist (Health care specialist) Hospital Universitari de Bellvitge, Spain
Hospital Universitari de Bellvitge, Spain
Projects

Grant

Designation Funders
2024/02/01 - Current MPS NOVA Hub: Advanced Microphysiological Systems and Pluripotent Stem Cell Technologies to Unveil Chronic Disease Mechanisms and Host-Microbe Interactions
101159729
Principal investigator
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
Ongoing
2023/04/01 - 2024/03/30 Mostmicro exploratory project: Unravelling ecological interactions leading to antimicrobial tolerance in polybacterial communities of the human gut microbiota.
UIDP/04612/2020
Principal investigator
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2023/04/30 - 2023/06/30 Determination of transition metal exchanges at the host-gut microbiota interface
9967
Principal investigator
Universitätsklinikum Jena, Germany
Concluded
2018/05/15 - 2021/08/31 Probing the impact of xenobiotics on gut microbial communities
EC664726 (to Sarela Garcia-Santamarina)
EMBL Core Funding (to Athanasios Typas)
Post-doc Fellow
European Molecular Biology Laboratory, Germany
EU Framework Programme for Research and Innovation Marie Sklodowska-Curie Actions
Concluded
2008/01/01 - 2013/07/31 Isolation and characterization of new models of endogenous oxidative stress in Schizosaccharomyces pombe
CSD 2007-0020 (to Elena Hidalgo)
BFU2009-06933 (to Elena Hidalgo)
BFU2012-32045 (to Elena Hidalgo)
PhD Student Fellow
Universitat Pompeu Fabra, Spain
Concluded

Contract

Designation Funders
2023/04/01 - 2029/03/31 Establishing the impact of transition metal homeostasis in the gut microbiota composition and function (INTERACTION)
Principal investigator
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2013/11/01 - 2018/04/15 Copper homeostasis mechanisms at the host fungal pathogen interface in Cryptococcus neoformans
GM041840 (to Dennis J Thiele)
Post-doc
Duke University, United States
National Institutes of Health
Concluded
Outputs

Publications

Conference poster
  1. Garcia-Santamarina, Sarela. "Common therapeutics induce emergent behaviours on in vitro gut microbial communities". Paper presented in EMBL Symposium New Approaches and Concepts in Microbiology, 2021.
  2. Garcia-Santamarina, Sarela. "Probing the impact of drugs on in vitro gut microbial communities". Paper presented in Cold Spring Harbor Laboratory Conference in Microbiome, 2020.
  3. Garcia-Santamarina, Sarela. "Probing the impact of drugs on in vitro gut microbial communities". Paper presented in EMBL Symposium New Approaches and Concepts in Microbiology, 2019.
  4. Garcia-Santamarina, Sarela. "At the cross-roads of copper and iron sulfur clusters as virulence factors in the human fungal pathogen Cryptococcus neoformans". Paper presented in 10th International Conference of Cryptococcus and Cryptococcosis (ICCC-10), 2017.
  5. Garcia-Santamarina, Sarela. "Potential role of a lytic polysaccharide monooxygenase (LPMO) in the virulence of the human fungal pathogen Cryptococcus neoformans". Paper presented in Gordon Research Conference in Cell Biology of Metals - Mechanisms from Microbes to Humans, 2015.
  6. Garcia-Santamarina, Sarela. "Potential role of a putative lytic polysaccharide monooxygenase (LPMO) in the virulence of the human fungal pathogen Cryptococcus neoformans". Paper presented in Mid Atlantic Microbial Pathogenesis Meeting (MAMP), 2015.
  7. Garcia-Santamarina, Sarela. "Iron-sulfur cluster proteins as potential cellular targets for copper toxicity in the human fungal pathogen Cryptococcus neoformans". Paper presented in The 9th International Biometals Symposium, BIOMETALS 2014, 2014.
  8. Garcia-Santamarina, Sarela. "Redox balance of Schizosaccharomyces pombe measured in vivo with the genetically encoded probe Grx1-RoGFP2". Paper presented in International Symposium on Redox Signalling and Oxidative Stress/IV Spanish and Portuguese Meeting in Free Radicals, 2012.
  9. Garcia-Santamarina, Sarela. "Analysis of reversible and irreversible protein modifications upon oxidative stress in Schizosaccharomyces pombe". Paper presented in II Workshop on Reactive Oxygen Species and Systems, 2009.
  10. Garcia-Santamarina, Sarela. "Evaluation of ELISA methods in the Personal Lab Junior of Adaltis to measure the concentrations of three hormonal magnitudes". Paper presented in XXIV Congreso Sociedad Española de Química Clínica, 2005.
  11. Garcia-Santamarina, Sarela. "Evaluation of an ELISA method in the Personal Lab Junior of Adaltis to measure antibody concentrations against the thyrotropin receptor". Paper presented in XXIV Congreso Sociedad Española de Química Clínica, 2005.
  12. Garcia-Santamarina, Sarela. "Performance of amylase, pancreatic amylase and lipase for the diagnosis of acute pancreatitis". Paper presented in XXIII Congreso Sociedad Española de Química Clínica, 2004.
Journal article
  1. Garcia-Santamarina, Sarela; Kuhn, Michael; Devendran, Saravanan; Maier, Lisa; Driessen, Marja; MATEUS, ANDRÉ; Mastrorilli, Eleonora; et al. Corresponding author: Typas, Athanasios. "Emergence of community behaviors in the gut microbiota upon drug treatment". Cell (2024):
    In press
  2. Müller, Patrick; de la Cuesta-Zuluaga, Jacobo; Kuhn, Michael; Baghai Arassi, Maral; Treis, Tim; Blasche, Sonja; Zimmermann, Michael; et al. Corresponding author: Garcia-Santamarina, Sarela. "High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities". Nature Protocols (2023): http://dx.doi.org/10.1038/s41596-023-00926-4.
    10.1038/s41596-023-00926-4
  3. Wuyts, Sander; Alves, Renato; Zimmermann-Kogadeeva, Maria; Nishijima, Suguru; Blasche, Sonja; Driessen, Marja; Geyer, Philipp E; et al. "Consistency across multi-omics layers in a drug-perturbed gut microbial community". Molecular Systems Biology 19 9 (2023): http://dx.doi.org/10.15252/msb.202311525.
    10.15252/msb.202311525
  4. Bobonis, Jacob; Mitosch, Karin; Mateus, André; Karcher, Nicolai; Kritikos, George; Selkrig, Joel; Zietek, Matylda; et al. "Bacterial retrons encode phage-defending tripartite toxin–antitoxin systems". Nature 609 7925 (2022): 144-150. http://dx.doi.org/10.1038/s41586-022-05091-4.
    10.1038/s41586-022-05091-4
  5. Probst, Corinna; Garcia-Santamarina, Sarela; Brooks, Jacob T.; Van Der Kloet, Inge; Baars, Oliver; Ralle, Martina; Thiele, Dennis J.; Alspaugh, J. Andrew. "Interactions between copper homeostasis and the fungal cell wall affect copper stress resistance". PLOS Pathogens 18 6 (2022): e1010195. http://dx.doi.org/10.1371/journal.ppat.1010195.
    10.1371/journal.ppat.1010195
  6. Maier, Lisa; Goemans, Camille V.; Wirbel, Jakob; Kuhn, Michael; Eberl, Claudia; Pruteanu, Mihaela; Müller, Patrick; et al. "Unravelling the collateral damage of antibiotics on gut bacteria". Nature 599 7883 (2021): 120-124. http://dx.doi.org/10.1038/s41586-021-03986-2.
    10.1038/s41586-021-03986-2
  7. Aaron D. Smith; Sarela Garcia-Santamarina; Martina Ralle; David R. Loiselle; Timothy A. Haystead; Dennis J. Thiele. "Transcription factor–driven alternative localization of Cryptococcus neoformans superoxide dismutase". Journal of Biological Chemistry 296 (2021): 100391-100391. https://doi.org/10.1016/j.jbc.2021.100391.
    10.1016/j.jbc.2021.100391
  8. Garcia-Santamarina, Sarela; Probst, Corinna; Festa, Richard A.; Ding, Chen; Smith, Aaron D.; Conklin, Steven E.; Brander, Søren; et al. "A lytic polysaccharide monooxygenase-like protein functions in fungal copper import and meningitis". Nature Chemical Biology 16 3 (2020): 337-344. http://dx.doi.org/10.1038/s41589-019-0437-9.
    10.1038/s41589-019-0437-9
  9. Marte, Luis; Boronat, Susanna; García-Santamarina, Sarela; Ayté, José; Kitamura, Kenji; Hidalgo, Elena. "Identification of ubiquitin-proteasome system components affecting the degradation of the transcription factor Pap1". Redox Biology 28 (2020): 101305. http://dx.doi.org/10.1016/j.redox.2019.101305.
    10.1016/j.redox.2019.101305
  10. Garcia-Santamarina, Sarela; Festa, Richard A.; Smith, Aaron D.; Yu, Chen-Hsin; Probst, Corinna; Ding, Chen; Homer, Christina M.; et al. "Genome-wide analysis of the regulation of Cu metabolism inCryptococcus neoformans". Molecular Microbiology 108 5 (2018): 473-494. http://dx.doi.org/10.1111/mmi.13960.
    10.1111/mmi.13960
  11. Garcia-Santamarina, Sarela; Uzarska, Marta A.; Festa, Richard A.; Lill, Roland; Thiele, Dennis J.. "Cryptococcus neoformans Iron-Sulfur Protein Biogenesis Machinery Is a Novel Layer of Protection against Cu Stress". mBio 8 5 (2017): http://dx.doi.org/10.1128/mbio.01742-17.
    10.1128/mbio.01742-17
  12. Boronat, Susanna; Domènech, Alba; Carmona, Mercè; García-Santamarina, Sarela; Bañó, M. Carmen; Ayté, José; Hidalgo, Elena. "Lack of a peroxiredoxin suppresses the lethality of cells devoid of electron donors by channelling electrons to oxidized ribonucleotide reductase". PLOS Genetics 13 6 (2017): e1006858. http://dx.doi.org/10.1371/journal.pgen.1006858.
    10.1371/journal.pgen.1006858
  13. García-Santamarina, Sarela; Thiele, Dennis J.. "Copper at the Fungal Pathogen-Host Axis". Journal of Biological Chemistry 290 31 (2015): 18945-18953. http://dx.doi.org/10.1074/jbc.r115.649129.
    10.1074/jbc.r115.649129
  14. García-Santamarina, Sarela; Boronat, Susanna; Domènech, Alba; Ayté, José; Molina, Henrik; Hidalgo, Elena. "Monitoring in vivo reversible cysteine oxidation in proteins using ICAT and mass spectrometry". Nature Protocols 9 5 (2014): 1131-1145. http://dx.doi.org/10.1038/nprot.2014.065.
    10.1038/nprot.2014.065
  15. García-Santamarina S; Boronat S; Hidalgo E. "Reversible cysteine oxidation in hydrogen peroxide sensing and signal transduction.". (2014): http://europepmc.org/abstract/med/24738931.
    10.1021/bi401700f
  16. Paulo, Esther; García-Santamarina, Sarela; Calvo, Isabel A.; Carmona, Mercè; Boronat, Susanna; Domènech, Alba; Ayté, José; Hidalgo, Elena. "A genetic approach to study H2O2scavenging in fission yeast - distinct roles of peroxiredoxin and catalase". Molecular Microbiology 92 2 (2014): 246-257. http://dx.doi.org/10.1111/mmi.12548.
    10.1111/mmi.12548
  17. Boronat, Susanna; Domènech, Alba; Paulo, Esther; Calvo, Isabel A.; García-Santamarina, Sarela; García, Patricia; Encinar del Dedo, Javier; et al. "Thiol-based H2O2 signalling in microbial systems". Redox Biology 2 (2014): 395-399. http://dx.doi.org/10.1016/j.redox.2014.01.015.
    10.1016/j.redox.2014.01.015
  18. Calvo, Isabel A.; Boronat, Susanna; Domènech, Alba; García-Santamarina, Sarela; Ayté, José; Hidalgo, Elena. "Dissection of a Redox Relay: H2O2-Dependent Activation of the Transcription Factor Pap1 through the Peroxidatic Tpx1-Thioredoxin Cycle". Cell Reports 5 5 (2013): 1413-1424. http://dx.doi.org/10.1016/j.celrep.2013.11.027.
    10.1016/j.celrep.2013.11.027
  19. García-Santamarina, Sarela; Boronat, Susanna; Ayté, José; Hidalgo, Elena. "Methionine sulphoxide reductases revisited: free methionine as a primary target of H2O2stress in auxotrophic fission yeast". Molecular Microbiology 90 5 (2013): 1113-1124. http://dx.doi.org/10.1111/mmi.12420.
    10.1111/mmi.12420
  20. García-Santamarina, Sarela; Boronat, Susanna; Calvo, Isabel A.; Rodríguez-Gabriel, Miguel; Ayté, José; Molina, Henrik; Hidalgo, Elena. "Is Oxidized Thioredoxin a Major Trigger for Cysteine Oxidation? Clues from a Redox Proteomics Approach". Antioxidants & Redox Signaling 18 13 (2013): 1549-1556. http://dx.doi.org/10.1089/ars.2012.5037.
    10.1089/ars.2012.5037
  21. García-Santamarina, Sarela; Boronat, Susanna; Espadas, Guadalupe; Ayté, José; Molina, Henrik; Hidalgo, Elena. "The oxidized thiol proteome in fission yeast—Optimization of an ICAT-based method to identify H2O2-oxidized proteins". Journal of Proteomics 74 11 (2011): 2476-2486. http://dx.doi.org/10.1016/j.jprot.2011.05.030.
    10.1016/j.jprot.2011.05.030
  22. Calvo, Isabel A.; Gabrielli, Natalia; Iglesias-Baena, Iván; Garcia-Santamarina, Sarela; Hoe, Kwang-Lae; Kim, Dong Uk; Sansó, Miriam; et al. "Genome-Wide Screen of Genes Required for Caffeine Tolerance in Fission Yeast". PLoS ONE 4 8 (2009): e6619. http://dx.doi.org/10.1371/journal.pone.0006619.
    10.1371/journal.pone.0006619
  23. Zuin, Alice; Gabrielli, Natalia; Calvo, Isabel A.; García-Santamarina, Sarela; Hoe, Kwang-Lae; Kim, Dong Uk; Park, Han-Oh; et al. "Mitochondrial Dysfunction Increases Oxidative Stress and Decreases Chronological Life Span in Fission Yeast". PLoS ONE 3 7 (2008): e2842. http://dx.doi.org/10.1371/journal.pone.0002842.
    10.1371/journal.pone.0002842
  24. Armendáriz, Yolanda; García, Sarela; Lopez, Rosa M; Pou, Leonor. "Hematocrit Influences Immunoassay Performance for the Measurement of Tacrolimus in Whole Blood". Therapeutic Drug Monitoring 27 6 (2005): 766-769. http://dx.doi.org/10.1097/01.ftd.0000185769.36878.00.
    10.1097/01.ftd.0000185769.36878.00
  25. Calzada, P.; Suárez, I.; García, S.; Barrot, C.; Sánchez, C.; Ortega, M.; Mas, J.; et al. "The Fang population of Equatorial Guinea characterised by 15 STR-PCR polymorphisms". International Journal of Legal Medicine 119 2 (2004): 107-110. http://dx.doi.org/10.1007/s00414-004-0505-9.
    10.1007/s00414-004-0505-9
Magazine article
  1. Garcia-Santamarina, Sarela. "Modelos de Investigación: Unha aproximación económica", Grial, 2011
Preprint
  1. Garcia-Santamarina, Sarela; Kuhn, Michael; Devendran, Saravanan; Maier, Lisa; Driessen, Marja; Mateus, André; Mastrorilli, Eleonora; et al. "Emergence of community behaviors in the gut microbiota upon drug treatment". 2023. http://dx.doi.org/10.1101/2023.06.13.544832.
    10.1101/2023.06.13.544832

Other

Other output
  1. Bacterial retrons encode tripartite toxin/antitoxin systems (pre-print). 2020. Jacob Bobonis; André Mateus; Birgit Pfalz; Sarela Garcia-Santamarina; Marco Galardini; Callie Kobayashi; Frank Stein; et al. https://doi.org/10.1101/2020.06.22.160168.
    10.1101/2020.06.22.160168
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023/09/21 Emergence of community behaviours in the gut microbiota upon drug treatment EMBO | EMBL Symposium: The Human Microbiome
(Heidelberg, Germany)
2022/08/16 Common Therapeutics Induce Emergent Behaviours in Synthetic Gut Bacterial Communities ISME18: 18th International Symposium on Microbial Ecology
(Lausanne, Switzerland)
2022/03/03 Common Therapeutics Induce Emergent Behaviours in synthetic gut bacterial communities 11th Bioinformatics Open Days Edition
Universidade do Minho (Braga, Portugal)
2021/11/04 Common therapeutics induce emergent behaviors on gut bacterial communities Human Gut Microbiome Summit
Curtis & Wyss (Virtual, Spain)
2020/12/28 Establishing the Impact of commonly used drugs on in vitro gut microbial communities XI Meeting of Young Investigators Living Abroad
Museos Científicos – Ayuntamiento de A Coruña (Virtual)
2020/05/19 Establishing the impact of commonly used drugs on in vitro gut microbial communities Virtual Microbiome Summit
Lucy Mailing (United States)
2019/07/18 Probing the impact of drugs on in vitro gut microbial communities Cold Spring Harbor Laboratory Conference in Microbiome
Cold Spring Harbor (Cold Spring Harbor, United States)
2016/06/05 Iron sulfur cluster proteins as potential targets for copper toxicity in the human funal pathogen Cryptococcus neoformans FASEB Science Research Conference on Trace Elements in Biology and Medicine
FASEB Federation of American Societies for Experimental Biology (Bozeman, Montana, United States)
2011/03/28 The disulfide proteome in fission yeast-optimization of an ICAT based method to identify H2O2 oxidized proteins Physiology and pathophysiology of free radicals
Universitat de Valencia; Rosasnet; Spanish group on free radicals (Valencia, Spain)
2010/02/11 Analysis of reversible and irreversible protein modifications upon oxidsative stress in Schizosaccharomyces pombe by proteomic approaches II Jornadas Bienales de Jóvenes Investigadores en Proteómica
EPRO Sociedad Española de Proteómica (Cordoba, Spain)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2024/01/01 - Current INVESTIGATING THE ROLE OF GUT MICROBIOTA IN HOST METAL HOMEOSTASIS
Supervisor
PhD in Molecular Biosciences (PhD)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2023/09/01 - Current Establishing the impact of transition metals on gut microbiota pathogen colonization resistance
Co-supervisor
MSc in Molecular Genetics and Biomedicine (Master)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2023/03/01 - Current Development of microbial community simulation methods to characterize and analyze the effects of metal concentrations on pathogen silencing/promotion
Co-supervisor
MSc in Bioinformatics (Master)
Universidade do Minho, Portugal
2022/10/01 - 2023/03/31 Study of iron effects on commensals bacteria of the gut microbiome and enteropathogens
Co-supervisor
MSc in Translacional Biomedical Sciences (Master)

Event organisation

Event name
Type of event (Role)
Institution / Organization
2023/09/01 - Current Evolving Microbes and Global Health (2024/10/22 - 2024/10/25)
Conference (Co-organisor)
Instituto Gulbenkian de Ciência, Portugal

Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal

Universidade Católica Portuguesa, Portugal
2023/01 - Current ITQB NOVA Pilot Mentoring Program addressed to PIs and postdocs for their career development (2023/01/01)
Other (Member of the Organising Committee)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2020/09/09 - 2020/09/09 EMBL conference: "The impact of Covid19 crisis on women in science -challenges and solutions (2020/09/09 - 2020/09/09)
Conference (Co-organisor)
European Molecular Biology Laboratory, Germany

Event participation

Activity description
Type of event
Event name
Institution / Organization
2022/10/10 - 2022/10/16 Science Quiz outreach activity at FIC.A Science International Festival
Exhibition
2022/10/10 - 2022/10/16 Speaker at the outreach SoapBox Science activity @ FIC.A Science International Festival
Exhibition
2022/01/11 - 2022/01/11 Outreach Lecture: Intestinal Microbiota and Human Health
Seminar
Semana de Procariontes
Universidad Autónoma de la Ciudad de México, Mexico
2021/09/24 - 2021/09/24 Voluntary
Exhibition
Noite Europea dos Investigadores
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2019/11/15 - 2019/11/15 Outreach Lecture: Human microbiome: who, why, and how?
Festival
InsOmnia Medicae
Heidelberg University, United States
2019/09/27 - 2019/09/27 Voluntary
Exhibition
Night of Research
European Molecular Biology Laboratory, Germany
2018/09/28 - 2018/09/28 Voluntary
Exhibition
Night of Research
European Molecular Biology Laboratory, Germany

Jury of academic degree

Topic
Role
Candidate name (Type of degree)
Institution / Organization
2023/12/05 Study of Iron Metabolism in the Human Pathogen Acinetobacter baumanii
(Thesis) Main arguer
Beatriz Soraia Nunes Moniz (Master)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2023/03/31 Exploring commensal streptococci to prevent Streptococcus pneumoniae colonization
Thesis Member
Sara de Almeida Handem (PhD)
Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2020/01/31 Role of the Protein Quality Control System in Basal and Stress Conditions in Fission Yeast
Thesis Member
Luis Marte (PhD)
Universitat Pompeu Fabra, Spain

Ad Hoc journal article review

Journal title (ISSN) Publisher
2022/01/24 - 2022/01/24 Nature Microbiology (2058-5276)
2020/08/22 - 2020/08/22 Antioxidants (2076-3921)
2020/01/27 - 2020/01/27 Molecular Microbiology (1365-2958)

Association member

Society Organization name Role
2023/11/01 - Current EUROoCS European Organ-On-Chip Society
2021/10/20 - Current Sociedade Portuguesa de Microbiologia
2021/01/01 - 2022/01/01 Microbiology Society

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2023/07 - Current Symbnet PhD Summer School on Host-Microbe Symbiosis (Outros) Instituto Gulbenkian de Ciência, Portugal
2023/04 - Current Co-coordinator of the PhD curricular unit "Ecology and Evolution of Microbial Populations" PhD in Molecular Biosciences (Curso de doutoramento (conclusão de unidades curriculares)) Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal
2020/06/01 - 2021/03/30 Metabolomics & Proteomics, 150 h Metabolomics & Proteomics (Master) CEU Universidad Cardenal Herrera, Spain
2012 - 2013 Laboratory Teaching Assistant, 50 h Human Biology (Bachelor) Universitat Pompeu Fabra, Spain
2011 - 2012 Laboratory Teaching Assistant, 50 h Human Biology (Bachelor) Universitat Pompeu Fabra, Spain
2010 - 2011 Laboratory Teaching Assistant, 60 h Genetic Engineering and Biotechnology Applications (Bachelor) Universitat Pompeu Fabra, Spain

Evaluation committee

Activity description
Role
Institution / Organization Funding entity
2023/01/01 - Current Grant evaluator for the ETH Zurich Research Commission
Evaluator
ETH Zürich Foundation
2023/01/01 - Current Grant evaluator for the UK Research and Innovation Agency
Evaluator
UK Research and Innovation
2022/01/01 - Current Grant evaluator for the Swiss National Science Foundation
Evaluator
Schweizerischer Nationalfonds zur Förderung der wissenschaftlichen Forschung

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2021/02/28 Interview about my research path and findings El Faro de Vigo, Spain
2015/03/28 Interview about my research pathway and findings El Progreso de Lugo (Spain)

Interview (tv / radio show)

Program Topic
2021/09/29 - 2021/09/29 Ciencia e tal Research path and findings
2021/02/13 - 2021/02/13 Semprengalicia Research path and findings

Mentoring / Tutoring

Topic Student name
2023/02/01 - 2023/03/31 Establishing Micronutrients Impact on the Gut Microbiome Function Daniela Canhao
2023/02/01 - 2023/03/30 Establishing micronutrients impact on the gut microbiome function Amélia Marinheiro
2022/02/07 - 2022/04/30 Human Microbiota - Xenobiotics Interactions Catarina Oliveira
2022/02/07 - 2022/04/01 Human Microbiota - Xenobiotic Interactions Diogo Neves
2020/01/01 - 2020/06/30 Human microbiota - drug interactions Tim Treis
2019/06/15 - 2019/08/15 Human gut microbiota - drug interactions Allison Schiffman
2017/07/01 - 2017/09/30 Cu homeostasis in Cryptococcus neoformans Yudong Sun
2017/03/01 - 2017/06/30 Cu homeostasis in Cryptococcus neoformans Michael Hoy
2017/02/01 - 2017/02/28 Molecular Biology Tools in Cryptococcus neoformans Yeonseon Lee
2016/01/01 - 2016/12/31 Copper homeostasis in Cryptococcus neoformans Darius Jonasch
Distinctions

Award

2020 Award to the Presented Research with the Greatest Social Impact by Hijos de Rivera SSA
2014 Travel and accommodation award for Molecular Mycology course
Marine Biological Laboratory, United States
2006 Fees and monthly stipend award for MSc Molecular Biology of Infectious Diseases at LSHTM
Fundación Pedro Barrié de la Maza, Spain
2001 Travel and accommodation award Intercampus of International Cooperation
Gobierno de Espana Ministerio de Asuntos Exteriores y de Cooperación, Spain

Other distinction

2018 Marie-Curie EIPOD3 Interdisciplinary Postdoctoral Fellowship
European Molecular Biology Laboratory, Germany

European Commission Marie Sklodowska-Curie Actions, Belgium
2010 Salary award PhD Studentship
Universitat Pompeu Fabra, Spain