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Pedro Miguel de Oliveira Madeira.
Identification

Personal identification

Full name
Pedro Miguel de Oliveira Madeira

Citation names

  • Madeira, Pedro
  • Madeira, Pedro M.

Author identifiers

Ciência ID
8E18-1746-6F5C
ORCID iD
0000-0002-2802-0957

Email addresses

  • pmmadeira@ualg.pt (Professional)

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
English Advanced (C1) Advanced (C1) Intermediate (B1) Advanced (C1)
Education
Degree Classification
2018/09/01 - 2022/08/31
Ongoing
Ciências Biológicas (Doutoramento)
Major in Genética, Genómica e Evolução
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal

Centro de Ciências do Mar, Portugal

Kobe Daigaku, Japan
2016
Concluded
Mestrado em Biologia Evolutiva e do Desenvolvimento (Mestrado)
Universidade de Lisboa Faculdade de Ciências, Portugal
"High unexpected genetic diversity of a narrow endemic terrestrial mollusc" (THESIS/DISSERTATION)
17
2012
Concluded
Biologia (Licenciatura)
Universidade do Algarve, Portugal
"The limits of morphological identification of Colias butterflies - the use of mitochondrial DNA to identify possible hybridization and/or cryptic species" (THESIS/DISSERTATION)
15
Affiliation

Science

Category
Host institution
Employer
2018/01/01 - 2018/08/31 Researcher (Research) Centro de Ciências do Mar, Portugal
2016/05/01 - 2016/10/31 Researcher (Research) Centro de Ciências do Mar, Portugal

Others

Category
Host institution
Employer
2017/10/01 - 2017/12/31 Técnico de Laboratório Voluntário Centro de Ciências do Mar, Portugal
Centro de Ciências do Mar, Portugal
2016/11/01 - 2017/03/31 Técnico de Investigação Voluntário Centro de Ciências do Mar, Portugal
2013/02/01 - 2013/08/30 Técnico de Investigação Voluntário Centro de Ciências do Mar, Portugal
Projects

Grant

Designation Funders
2018/09/01 - Current Using phylogenomics to solve an identity crisis – the case of genus Ecklonia. Where did it come from, where is it going and where does it belong?
SFRH/BD/140464/2018
PhD Student Fellow
2018/01/01 - 2019/08 GENEKELP - Thermal Adaptation of Marine Forests
PTDC/MAR-EST/6053/2014
Research Technician Fellow
Centro de Ciências do Mar, Portugal
Concluded
Outputs

Publications

Conference abstract
  1. Regina L. Cunha; Margarida Machado; Pedro M. Madeira; Luís Cancela da Fonseca; Rita Castilho; Margarida Cristo. "Genetic cleavage in the fairy shrimp Tanymastix stagnalis from southwestern Portuguese temporary ponds.". Paper presented in 7th European Pond Conservation Network Workshop, Faro, 2017.
Conference poster
  1. Gerardo I. Zardi; Marta Basto; Pedro Madeira; Carla Lourenço; Roberto Lo Savio; Ugo Valbusa; Fábia Azevedo; Maria Casero; Katy R Nicastro. "Plastic ingestion in aquatic-associated bird species in Portugal.". Paper presented in MICROPLASTICOS 2016 – 1º Congresso Português sobre Microplásticos: Contaminação Ambiental por Microplásticos e suas Implicações para a Saúde dos Ecossistemas, Animal e Humana, 2016.
Journal article
  1. Coleman, Melinda; Reddy, Maggie; Nimbs, M. J.; Marshell, A.; Al-Ghassani, S. A.; Bolton, John; Jupp, B. P.; et al. Corresponding author: Coleman, Melinda. "Loss of a globally unique kelp forest from Oman". Scientific Reports (2022):
    Accepted
  2. "Distinctive genetic signatures of two fairy shrimp species with overlapping ranges in Iberian temporary ponds". Freshwater Biology 66 9 (2021): 1680-1697. http://dx.doi.org/10.1111/fwb.13782.
    10.1111/fwb.13782
  3. Serrao, A.; Neiva, Joao; Almeida, Susana; Madeira, Pedro; Assis, Jorge; Faugeron, Sylvain; Alberto, Filipe; et al. "CLIMATE-DRIVEN EVOLUTION OF MARINE FORESTS ACROSS OCEANS". Phycologia (2021): https://publons.com/publon/51534842/.
  4. Pearson, Gareth A.; Martins, Neusa; Madeira, Pedro; Serrão, Ester A.; Bartsch, Inka. "Sex-dependent and -independent transcriptional changes during haploid phase gametogenesis in the sugar kelp Saccharina latissima". PLOS ONE 14 9 (2019): e0219723. http://dx.doi.org/10.1371/journal.pone.0219723.
    10.1371/journal.pone.0219723
  5. Morim, Teófilo; Bigg, Grant R.; Madeira, Pedro M.; Palma, Jorge; Duvernell, David D.; Gisbert, Enric; Cunha, Regina L.; Castilho, Rita. "Invasion genetics of the mummichog (Fundulus heteroclitus): recent anthropogenic introduction in Iberia". PeerJ 7 (2019): e6155. http://dx.doi.org/10.7717/peerj.6155.
    10.7717/peerj.6155
  6. Nicastro, Katy R.; Lo Savio, Roberto; McQuaid, Christopher D.; Madeira, Pedro; Valbusa, Ugo; Azevedo, Fábia; Casero, Maria; Lourenço, Carla; Zardi, Gerardo I.. "Plastic ingestion in aquatic-associated bird species in southern Portugal". Marine Pollution Bulletin 126 (2018): 413-418. http://dx.doi.org/10.1016/j.marpolbul.2017.11.050.
    10.1016/j.marpolbul.2017.11.050
  7. Madeira, Pedro M.; Chefaoui, Rosa M.; Cunha, Regina L.; Moreira, Francisco; Dias, Susana; Calado, Gonçalo; Castilho, Rita. "High unexpected genetic diversity of a narrow endemic terrestrial mollusc". PeerJ 5 (2017): e3069. http://dx.doi.org/10.7717/peerj.3069.
    10.7717/peerj.3069
  8. Kramp, Katja; Cizek, Oldrich; Madeira, Pedro M.; Ramos, Ana A.; Konvicka, Martin; Castilho, Rita; Schmitt, Thomas. "Genetic implications of phylogeographical patterns in the conservation of the boreal wetland butterflyColias palaeno(Pieridae)". Biological Journal of the Linnean Society 119 4 (2016): 1068-1081. http://dx.doi.org/10.1111/bij.12840.
    10.1111/bij.12840
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2020/12/16 Population genetic structure and connectivity in Ecklonia 5th World Conference on Marine Biodiversity
(Auckland, New Zealand)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2019/04/22 - 2021/03/01 Testing molecular markers for genotyping analysis in two Ecklonia species from South Africa
Co-supervisor
Biologia Marinha (Other)
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
2018/09/01 - 2019/07/05 Design and development of a flexible database of orthologous brown algal gene sequences from transcriptome resources
Co-supervisor
Biologia (Degree)
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal

Event participation

Activity description
Type of event
Event name
Institution / Organization
2021/06/17 - 2021/06/18 Webinar - Introduction to High-Performance Machine Learning
Workshop
Introduction to High-Performance Machine
Partnership for Advanced Computing In Europe, Belgium

SURFnet, Netherlands
2021/06/11 - 2021/06/18 Webinar - Bulk RNA-Seq analysis: from counts to differential expression
Workshop
Bulk RNA-Seq analysis: from counts to differential expression
VIB Bioinformatics Core, Belgium
2021/06/14 - 2021/06/16 Data Science with R - Applying R and machine learning to big data
Workshop
Data Science with R
Cineca, Italy

Partnership for Advanced Computing In Europe, Belgium
2020/02/01 - 2020/06/01 Marine Ecological Modelling and Global Change
Workshop
Marine Ecological Modelling and Global Change - Marine Biology Master's Course
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
2020/01/22 - 2020/01/22 RADCamp 2020 Lisbon - Aplication of RADSeq genomic data for population genomics and phylogenomics
Workshop
RADCamp Lisbon
Centro de Ecologia Evolução e Alterações Ambientais, Portugal

Universidade de Lisboa Faculdade de Ciências, Portugal
2019/11/13 - 2019/11/14 Advanced Training in Scientific Writing, by Shirley Ellis
Workshop
Advanced Training in Scientific Writing
Centro de Ciências do Mar, Portugal

Universidade do Algarve - Campus de Gambelas, Portugal
2019/06/03 - 2019/06/04 Introduction to Python for Scientists - Workshop on the foundations of Python for application to scientific projects.
Workshop
Introduction to Python for Scientists
Centro de Ciências do Mar, Portugal

Universidade do Algarve, Portugal
2018/09/24 - 2018/09/29 This EMBO Practical Course - Tree building: Advanced concepts and practice of phylogenetic analysis 2018
Workshop
Tree building: Advanced concepts and practice of phylogenetic analysis
European Molecular Biology Organization, Germany

Universidade do Algarve - Campus de Gambelas, Portugal

Journal scientific committee

Journal title (ISSN) Publisher
2021/08/27 - 2022/02/17 Journal of Phycology (1529-8817) John Wiley & Sons, Inc.
Distinctions

Other distinction

2018 PhD Scholarship from FCT (SFRH/BD/140464/2018)