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Ângela Novais is a senior researcher at the Applied Biomolecular Sciences Unit (UCIBIO) at the Faculty of Pharmacy-University of Porto (FFUP), with a CEEC Individual Assistant Researcher position. She is an invited assistant professor at Instituto Universitário de Ciências da Saúde (CESPU) and FFUP since 2020. She graduated in Pharmaceutical Sciences in 2004 by FFUP and obtained the doctoral degree in Microbiology in 2008 at Universidad Complutense de Madrid (Spain), her thesis was honored with the Abílio Rodríguez Paredes prize. Her research path in the Clinical Bacteriology and Antimicrobial Resistance field is dedicated to the molecular epidemiology of multidrug resistant Enterobacteriaceae from a One Health perspective to clarify the ecology, population structure and selection drivers of multidrug resistant bacteria. Applied research is focused on the development of reliable, quick and cost-effective methods for their laboratorial detection and to support diagnosis and infection control. Some of these methods constitute translational research already commercialized (Blue-Carba kit by ROSCO diagnostica) or in optimization for clinical microbiology diagnostic application through entrepreneurship programs (HiTech 2019; Bip Proof) and partnerships with key reference institutes in Europe (SSI, RIVM) and industrial partners (Clover Biosoft, Perkin-Elmer). She has captured funding from a Marie-Curie IEF fellowship (153K EUR) and to support her research in 7 projects (165K EUR), 6 of which as principal investigator, funded by national (FCT, UPIN) and international (European Society of Clinical Microbiology and Infectious Diseases-ESCMID; Bill & Melinda Gates Foundation) agencies. She published 69 original articles in high-impact (>80% Quartil-1/Decil-1) peer-reviewed journals in Infectious Diseases and Microbiology, 3 reviews and 1 book chapter. These publications reflect a high degree of impact (H-index 28; 3300 citations; Scopus) and implication (half as main or corresponding author). Degree of internationalization is demonstrated by 27 collaborative papers, with >15 well-recognized experts in Portugal, Spain, Italy, the Netherlands, Romania and Brazil, and current collaborative projects with partners from the UK, Bangladesh and Denmark. Scientific recognition is reflected by invitations to present (19 oral, >120 poster; 9 received awards or recognitions), lecture (n=20), chair (n=6) or participate in the scientific (6) and organizing (5) committees of national and international conferences of high reputation in the field. She also provides regular scientific assessment of abstracts (scientific conferences), articles (n=10/year; peer-reviewed journals in Microbiology and infectious diseases), projects (scientific panels in Croatia, France and Norway), editorial activities (2 journals), and academic evaluation panels (n=10; PhD, Master, projects) in Portugal and abroad. She has extensive supervision experience at different levels (1 pos-doc, 8 PhD, 6 MSc, 12 integrated master students), teaching (MSc, Continuing Education Units), and authored pedagogical publications (7). Finally, she has an active role in relevant Microbiology societies (ESCMID, SPM) and UCIBIO (member of the Human Resources working group, communication ambassador, representant of Biodata.pt research infrastructure). She is an elected member of the executive committee of the ESGEM study group (2021-2023; 2023-2025) where she promotes scientific activities and builds capacity around the community. She is part of the founders of MicroMundo@UPorto service-learning initiative in Portugal and tutor of the program (4 editions), and is engaged with activities of knowledge transfer to healthcare professionals and the society (BIP Proof, Mostra UP, organization of webinars, media appearances).
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Identification

Personal identification

Full name
Ângela Patrícia Silva Novais

Citation names

  • Novais, Ângela

Author identifiers

Ciência ID
9C1E-564B-589E
ORCID iD
0000-0003-1171-0326
Google Scholar ID
https://scholar.google.com/citations?user=4SpN8IoAAAAJ&hl=pt-PT
Researcher Id
D-5225-2013
Scopus Author Id
14060855700

Email addresses

  • aamorim@ff.up.pt (Professional)

Websites

Knowledge fields

  • Medical and Health Sciences - Health Sciences - Infectious Diseases

Languages

Language Speaking Reading Writing Listening Peer-review
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Spanish; Castilian Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2023/11/16 - 2023/11/17
Attended
 Leadership Development Course (Outros)
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2019/02 - 2019/07
Concluded
 HiTech 2019 - Translating cutting-edg technology and scientific discoveries into high-growth business opportunities. Project name: IR Bactyping (http://hiseedtech.com/programs/hitech#overview) (Outros)
Major in Transfer of Knowledge
HiSeedTech, Portugal
 not applicable
2008/07/04
Concluded
 Microbiologia (Doctor)
Major in Molecular epidemiology of Antibiotic Resistant Enterobacteriaceae
Universidad Complutense de Madrid, Spain
"Unidades de Captura e Dispersão Génica na Evolução das Beta-Lactamases de Espectro Ampliado" (THESIS/DISSERTATION)
 Sobresaliente "cum laude" (Maximum Classification
2004/05/10
Concluded
 Pharmaceutical Sciences (Licenciatura)
Universidade do Porto Faculdade de Farmácia, Portugal
"Licenciatura em Ciências Farmacêuticas" (THESIS/DISSERTATION)
 Fifteen (15) values - Good (C)
Affiliation

Science

Category
Host institution 		Employer
2019/03/01 - Current Contracted Researcher (Research) REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
Universidade do Porto Faculdade de Farmácia, Portugal
2022/06/01 - 2028/05/29 Auxiliary Researcher (Research) Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
Unidade de Ciências Biomoleculares Aplicadas, Portugal
2015 - 2019/02/25 Postdoc (Research) REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
2013/03/18 - 2015/06/17 Auxiliary Researcher (Research) REQUIMTE, Portugal
2008/07/01 - 2010/02/28 Contracted Researcher (Research) Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública, Spain
2007/04/01 - 2008/07/31 Contracted Researcher (Research) Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública, Spain
2004/05/01 - 2006/12/21 Researcher (Research) Hospital Ramón y Cajal, Spain

Teaching in Higher Education

Category
Host institution 		Employer
2020/09/01 - Current Invited Associate Professor (University Teacher) Instituto Universitário de Ciências da Saúde, Portugal
Instituto Universitário de Ciências da Saúde, Portugal

Others

Category
Host institution 		Employer
2010/03/01 - 2012/10/28 Marie Curie Intra European Fellowhip - REF 255512 Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
Universidade do Porto Faculdade de Farmácia, Portugal
2003/11/01 - 2004/02/27 Internship in a microbiology laboratory in a foreign country (research in antibiotic resistance mechanisms) Grant awarded by the European Program Leonardo da Vinci and financed by the Portuguese Assoc Hospital Ramón y Cajal, Spain
Projects

Grant

Designation Funders
2024/02/01 - 2026/01/29 Development and Validation of Fourier transform infrared (FT-IR) spectroscopy for rapid typing of multidrug resistant Escherichia coli and infection control
ESCMID Study Group Research Grant 2024
Principal investigator
Unidade de Ciências Biomoleculares Aplicadas, Portugal
 European Society of Clinical Microbiology and Infectious Diseases
Ongoing
2023/07/01 - 2024/12/29 Low-cost rapid diagnostics and typing for clinical microbiology using FTIR
INV-060596
Co-Principal Investigator (Co-PI)
Unidade de Ciências Biomoleculares Aplicadas, Portugal
 Bill & Melinda Gates Foundation
Ongoing
2023/10/01 - 2023/11/16 Comprehensive Omics, Spectroscopy and MALDI-TOF MS for Microbial Characterization and Surveillance
HR24-00054
Researcher
Under evaluation
2020/01/01 - 2020/12/31 IR Bactyping – A service of bacterial typing for real-time support of epidemiology and infection control
IR Bactyping
Principal investigator
REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
 Fundação Amadeu Dias
Ongoing
2004 - 2006 Unidades de captura génica en la interfase entre el medioambiente y el medio hospitalario: elementos de riesgo en la evolución de la resistencia a los antimicrobianos
SAF2003-09285
PhD Student Fellow
Hospital Ramón y Cajal, Spain
 Ministerio de Ciencia y Tecnología de España
Concluded

Contract

Designation Funders
2022/06/01 - 2028/05/31 Deciphering surface glycans signatures of multidrug resistant bacterial pathogens
2021.02252.CEECIND/CP1662/CT0009
10.54499/2021.02252.CEECIND/CP1662/CT0009
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2021/01/01 - 2025/12/31 Institute for Health and Bioeconomy
LA/P/0140/2020
10.54499/LA/P/0140/2020
Research Fellow
Associação do Instituto Superior Técnico para a Investigação e Desenvolvimento, Portugal

Universidade de Lisboa Instituto de Bioengenharia e Biociências, Portugal

Universidade NOVA de Lisboa, Portugal

INESC Microsistemas e Nanotecnologias, Portugal

Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Unidade de Ciências Biomoleculares Aplicadas, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2020/01/01 - 2023/12/31 Applied Molecular Biosciences Unit
UIDB/04378/2020
10.54499/UIDB/04378/2020
Research Fellow
Universidade NOVA de Lisboa, Portugal

Unidade de Ciências Biomoleculares Aplicadas, Portugal

Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Universidade do Porto, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2020/01/01 - 2023/12/31 Applied Molecular Biosciences Unit
UIDP/04378/2020
10.54499/UIDP/04378/2020
Research Fellow
Universidade NOVA de Lisboa, Portugal

Unidade de Ciências Biomoleculares Aplicadas, Portugal

Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

Associação para a Inovação e Desenvolvimento da FCT, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Universidade do Porto, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2014/03/01 - 2015/08/31 Optimization of MALDI-TOF MS for the assessment of bacterial cell viability towards a potential application in food industry
EXPL/DTP-SAP1797/2013
Researcher
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2013/01/01 - 2015/06/30 Chelators for novel therapeutic strategies.
NORTE-07-0124-FEDER-000066.
Researcher
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
Concluded
2010/06/01 - 2012/10/28 Characterization of widespread uropathogenic multidrug resistant Escherichia coli clones by using a combined approach of conventional genotypic methods and high-throughput technology.
PIEF-GA-2009-255512
Principal investigator
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal

REQUIMTE, Portugal
European Commission Seventh Framework Programme for Research and Technological Development
Concluded
2009 - 2011 Confronting the clinical relevance of biocide induced antibiotic resistance (BIOHYPO)
FP7-KBBE-2008-2B-227258
Researcher
European Union
2008 - 2010 Spanish Framework “Ingenio 2010”, Programa Consolider, Centros de Investigación Biomédica en Red. Área de Epidemiología y Salud Pública (CIBERESP)
CB06/02/0053
Post-doc Fellow
Instituto de Salud Carlos III
Concluded

Other

Designation Funders
2021/01/01 - 2023/12/28 Setting-up biobanks and regenerative medicine strategies to boost research in neurosciences, immunology and infection, musculoskeletal, cardiovascular and oncologic diseases
NORTE-01-0145-FEDER-000039
Researcher
Universidade do Porto Faculdade de Farmácia, Portugal
Ongoing
2019/06/01 - 2020/05/31 Enterobacteriaceae multirresistentes: avaliação de um programa de vigilância e controlo implementado num hospital terciário universitário.
71
Researcher
Centro Hospitalar Universitário do Porto EPE, Portugal
 Grupo de Infeção e Sepsis do Hospital São João
Ongoing
2013/04/08 - 2014/07/07 Validation and optimization of MALDI-TOF for identification and tracking of clinically relevant Escherichia coli clones and antibiotic resistance mechanisms: a translational approach
EXPL/DTP-EPI/0196/2012; FCOMP-01-0124-FEDER-027745
Principal investigator
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
2012/03/01 - 2014/02/26 Validation and optimization of high-throughput methods (MALDI-TOF, FT-IR) to identify and track Escherichia coli clinically relevant clones
ESCMID Research grant 2012
Principal investigator
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
 European Society of Clinical Microbiology and Infectious Diseases
Concluded
2012 - 2013 Evaluation of adhesion and biofilm producing abilities of worldwide spread Escherichia coli uropathogenic clonal complexes
PP-IJUP2011-277 (3500EUR)
Principal investigator
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
 Universidade do Porto
Concluded
2010 - 2011 GENOTYPIC AND HIGH-TROUGHPUT METHODOLOGIES FOR TRACING THE EMERGING PATHOGEN ESCHERICHIA ALBERTII
4000EUR
Researcher
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
 Universidade do Porto
Concluded
2007 - 2010 Desenvolvimento e reprogramação de sistemas microbianos (DeReMicrobiana-CM)
CAM-SAL-0246-2006
Researcher
Hospital Ramón y Cajal, Spain
 Comunidad de Madrid
2005 - 2009 Role of mobile genetic elements in the spread of antimicrobial drug resistance (DRESP2)
LSHM-CT-2005-018705
Researcher
Hospital Ramón y Cajal, Spain
 European Union
2005 - 2006 Ecología y evolución molecular de los elementos de transferencia horizontal implicados en la resistencia a antibióticos
HP03-97
Researcher
Hospital Ramón y Cajal, Spain
 Ministerio de Educación y Ciencia de España
Concluded
2004 - 2006 Combating resistance to antibiotics by broadening the knowledge on molecular mechanisms behind resistance to inhibitor of cell wall synthesis (COBRA)
LSHM-CT-2003-503335
Researcher
Hospital Ramón y Cajal, Spain
 European Union
Concluded
Outputs

Publications

Book chapter
  1. Novais, Ângela; Luísa Peixe. "Fourier Transform infrared spectroscopy for food and water Microbiology". In Application and Integration of Omics-Powered Diagnostics in Clinical and Public Health Microbiology. Springer International Publishing Group, 2020.
    Published • 10.1007/978-3-030-62155-1
Conference poster
  1. Ribeiro-Almeida M; Pinto de Carvalho A; Martins da Costa P; Novais Â; Peixe L; Antunes P. "Colistin resistant Klebsiella pneumoniae in intensive rabbit farms after colistin ban". Paper presented in 10th FEMS Congress of European Microbiologists., 2023.
  2. Gonçalves AB; Alves V; Neves I; Read MA; Peixe L; Novais, Ângela. "Emergence of carbapenem-resistant Klebsiella pneumoniae strains with variable mechanisms of resistance to ceftazidime-avibactam and imipenem-relebactam". Paper presented in 28º SIMPÓSIO DE INFECÇÃO E SEPSIS, 2023.
  3. Gonçalves Ribeiro T; Rueda Furlan JP; Mendéz G; Mancera L; Novais, Ângela; Peixe L. "FT-IR ATR spectroscopy for rapid and low-cost identification of clinically relevant Citrobacter species". Paper presented in 33rd ECCMID – European Congress of Clinical Microbiology and Infectious Diseases, 2023.
  4. Loiodice M; Ribeiro T; Silva LM; Ramos MH; Peixe L; Novais, Ângela. Corresponding author: Novais, Ângela. "Molecular epidemiology of MDR and non-MDR Klebsiella pneumoniae complex causing invasive infections". Paper presented in 33rd ECCMID – European Congress of Clinical Microbiology and Infectious Diseases, 2023.
  5. Magalhães M; Ribeiro Almeida M; Mourão J; Rebelo A; Lopes D; Paiva S; Peixe L; et al. "From farm to fork: occurrence of persistent multidrug resistant and copper tolerant Klebsiella pneumoniae clones in poultry farms". Paper presented in 33rd ECCMID – European Congress of Clinical Microbiology and Infectious Diseases, 2023.
  6. Mourão J; Ribeiro-Almeida M; Magalhães M; Rebelo A; Novais C; Peixe L; Novais, Ângela; Antunes P. "In depth genomic analysis of Klebsiella pneumoniae from intensive poultry production: an understudied non-clinical setting". Paper presented in 33rd ECCMID - European Congress of Clinical Microbiology and Infectious Diseases 2023, 2023.
  7. Gonçalves AB; Alves V; Neves I; Read MA; Pinheiro N; Mendez G; Mancera L; et al. "FT-TR supporting infection control of carbapenemase-producing Klebsiella pneumoniae in real-time". Paper presented in 33rd ECCMID - European Congress of Clinical Microbiology and Infectious Diseases, 2023.
  8. "Gonçalves AB, Ribeiro T, Novais Â, Peixe L. Species-specific affiliation of ACT, MIR and CMH beta-lactamases within Enterobacter sp. clarifying taxonomy and dispersion of these enzymes.". Paper presented in 32th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2022.
  9. "Loiodice M, Ribeiro T, Peixe L, Marques-Silva L, Ramos MH, Novais A. High incidence of extended spectrum ß-lactamases and carbapenemases among Klebsiella sp. causing invasive infections in humans.". Paper presented in 32th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2022.
  10. "Mendes AC, Novais A, Ramos MH, Peixe L. Prevalence and epidemiology of Carbapenemase-producing Enterobacterales in a tertiary care hospital, over a five-year period.". Paper presented in 32th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Lisbon, Portugal, 2022.
  11. "1. Mendes AC, Silva T, Teixeira J, Ramos MH, Novais Â, Peixe L. Evaluation of IR Biotyper for long-term surveillance of carbapenemase-producing Klebsiella pneumoniae clinical isolates. National Congress Microbiology Microbiotec'21. Portugal, November 2021. Webconference.". Paper presented in National Congress Microbiology Microbiotec'21., 2021.
  12. "Ribeiro S, Mourão J, Novais A, Campos J, Peixe L, Antunes P. 2021. Do prado ao prato: retirada da colistina em explorações avícolas portuguesas resulta na redução de bactérias resistentes em carne de frango". 13ª Reunião Anual PortFIR, 28 Oct, edição online., 2021.". Paper presented in 13ª Reunião Anual PortFIR, 2021.
  13. "4. Gonçalves AB, Ribeiro TG, Novais Â, Peixe L. Reconstruction of ACT/MIR/CMH phylogeny reveals species-specific evolution within Enterobacter spp. World Microbe Forum, 20-24 June, ASM and FEMS collaboration, online., 2021.". Paper presented in World Microbe Forum, 2021.
  14. "Ribeiro-Almeida M, Novais Â, Monteiro E, Ribeiro S, Rebelo A, Pereira B, Baptista C, Peixe L, Novais C, Antunes P. 2021. Diverse colistin resistant and copper tolerant Klebsiella pneumoniae global high-risk clones in poultry farms". World Microbe Forum, 20-24 June, ASM and FEMS collaboration, online., 2021.". Paper presented in World Microbe Forum, 2021.
  15. "6. Ribeiro-Almeida M, Â. Novais, J. Mourão, J. Freitas-Silva, S. Ribeiro, S. Perovic, P. Martins da Costa, L. Peixe, P. Antunes. 202Mcr-1 In Gulls Is Associated With Diverse Emerging Zoonotic E. Coli Clonal Lineages And Plasmids Enriched In Antibiotic Resistance Genes, Metal Operons And Virulence Factors".". Paper presented in World Microbe Forum, 2021.
  16. "Loiodice M, Peixe L, Novais Â. Variable susceptibility of Klebsiella pneumoniae to UVC light. 31th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID). Paris, France. April 2021.". Paper presented in 31th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2021.
  17. Novais, Ângela. "Novais Â, Ferraz RV, Viana M, Costa PM, Peixe L. Epidemiological and genomics insights into the first outbreak of an extensive drug resistant NDM-1-producing K. pneumoniae in Portugal.". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2020.
  18. Novais, Ângela. "Esposito EP, Cervoni M, Roe CC, Novais Â, Peixe L, Pournaras S, Brisse S, Sahl JW, Zarrillo R, Imperi F. Virulence profile and comparative genomics analysis of the emerging Klebsiella pneumoniae genotypes ST45, ST101 and ST629.". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2020.
  19. Novais, Ângela. "Martins-Oliveira I, Gomes R, Pérez-Viso B, Dias A, Peixe L, Novais Â, Canton R, Rodrigues AG, Pina Vaz C. Validation of FASTmar kit, a Flow cytometric Assay for detection of main mechanisms of beta-lactams resistance directly from positive blood cultures.". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2020.
  20. Novais, Ângela. "Aracil-Gisbert S, Guerra-Pinto N, Ortiz-Fernández A, Fernández-De-Bobadilla MD, Lanza VF, Soriano C, Novais A, Peixe L, Gallego-Zarzosa S, Quinteros-Fiel MV, López-Olivencia M, Cantón R, de Pablo R, Baquero F, Coque TM. Built environment microbiological surveillance in a large ICU revealed abiotic reservoirs of highly persistent clones of Klebsiella species (K. pneumoniae, K. oxytoca, K. variic". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2020.
  21. Novais, Ângela. "Ribeiro-Almeida M, Pereira S, Freitas-Silva J, Ribeiro S, Perovic S, Novais Â, Peixe L, Costa PM, Antunes P. Emergence of mcr-1 among diverse MDR Escherichia coli in gulls from a coastal city uncovers potentially underestimated transmission routes.". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2020.
  22. Novais, Ângela. "Ksiezarek M, Novais Â, Felga H, Mendes F, Escobar M, Peixe L. Insights into reservoir and pathogenicity of ST83 Escherichia coli: role of hemolysin A operon duplication in severity of urinary tract infections.". Paper presented in 30th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)., 2020.
  23. Novais, Ângela. "Antunes P, Novais C, Novais Â, Grosso F, Ribeiro TG, Mourão J, Perovic S, Rocha J, Rebelo A, Kziezarek M, Freitas AR, Peixe L. IMPLEMENTATION OF MICROMUNDO@UPORTO: A PEDAGOGICAL PROJECT OF SERVICE-LEARNING FOR EDUCATION IN MICROBIOLOGY AND ANTIMICROBIAL RESISTANCE AWARENESS.". Paper presented in 8th Congress of European Microbiologists (FEMS 2019), 2019.
  24. Novais, Ângela. "Guerra AM, Lira A, Lameirão A, Selaru A, Abreu G, Lopes P, Mota M, Novais Â, Peixe L. Fourier-Transform Infrared spectroscopy as a useful cost-effective tool for Klebsiella pneumoniae outbreak management in the nosocomial setting.". Paper presented in 29th ECCMID European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2019.
  25. Novais, Ângela. "Ribeiro S, Mourão M, Campos J, Perovic SU, Novais Â, Peixe L, Antunes P. High occurrence of mcr-1 among diverse MDR Enterobacteriaceae clones and plasmids in chicken meat alert for potential foodborne transmission of mcr-1 to humans.". Paper presented in 29th ECCMID European Congress of Clinical Microbiology and Infectious Diseases, 2019.
  26. Novais, Ângela. "Ribeiro TG, Novais Â, Peixe L. New insights into CMY-2-like beta-lactamases phylogeny and sources". Paper presented in 29th ECCMID European Congress of Clinical Microbiology and Infectious Diseases, 2018.
  27. Novais, Ângela. "Mendes AC, Novais Â, Campos J, Rodrigues C, Santos C, Silva T, Antunes P, Peixe L. Emergence of mcr-1 among KPC-3-producing Klebsiella pneumoniae in hospitalized patients in Portugal: silent spread of a loud foe". Paper presented in 28th ECCMID European Congress of Clinical Microbiology and Infectious Diseases, 2018.
  28. Novais, Ângela. "Rodrigues C*, Lanza V, Peixe L, Novais Â, Coque TM. High-resolution genomic analysis of the globally disseminated multidrug resistance Klebsiella pneumoniae Clonal Groups 14 and 15.". Paper presented in MICROBIOTEC´17, 2017.
  29. Novais, Ângela. "Mendes AC*, Novais Â*, Campos J, Rodrigues C, Antunes P, Ramos H, Peixe L. Emergence of mcr-1 among carbapenemase-producing Enterobacteriaceae in the clinical setting.". Paper presented in MICROBIOTEC’17, 2017.
  30. Novais, Ângela. "Ribeiro TG, Ribeiro Gonçalves B, Silva M, Novais Â, Machado E, Carriço JA, Peixe L. Citrobacter lusitaniae sp. nov. and Citrobacter vieirensis sp. nov.: two novel Citrobacter species isolated from aquatic samples.". Paper presented in 7th Congress of European Microbiologists (FEMS), 2017.
  31. Sharma, Kusum; Sharma, Aman; Dhillon, Mandeep. "Rodrigues C, Lanza VF, Machado E, Peixe L, Novais Â, Coque TM. High-resolution genomic analysis of the globally disseminated multidrug resistance Klebiella pneumoniae Clonal Groups 14 and 15.". Paper presented in 27th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2017.
    10.1136/annrheumdis-2019-eular.6941
  32. Novais, Ângela. "Rodrigues C, Mendes AC, Sigma F, Bavlovic J, Machado E, Novais Â, Peixe L. Molecular epidemiology of non-Escherichia coli Enterobacteriaceae resistant to extended-spectrum beta-lactams colonizing long-term care facilities (LTCFs) residents.". Paper presented in 27th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), 2017.
  33. Novais, Ângela. "Rodrigues C, Lanza VF, Sousa C, Machado E, Lopes JA, Baquero F, Novais Â, Peixe L, Coque TM. Whole-genome sequencing supports the delineation of the multidrug-resistant CG14 and CG15 Klebsiella pneumoniae clones.". Paper presented in 26th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID),, 2016.
  34. Novais, Ângela. "Novais Â, Rodrigues C, Sousa C, Mendes AC, Lopes JA, Coque TM, Peixe L. Metabolic Profiles Of ST131 Escherichia coli Subclones Depicted By Fourier-transform Infrared Spectroscopy Unveil Variability Among The H30 Subclone.". Paper presented in 11th International Meeting on Microbial Epidemiological Markers (IMMEM XI)., 2016.
  35. Novais, Ângela. "Mendes AC, Rodrigues C, Ramos H, Peixe L, Novais Â. Dominance Of Escherichia coli ST131 H30 Subclone In A Portuguese Long Term Care Facility?". Paper presented in 11th International Meeting on Microbial Epidemiological Markers (IMMEM XI), 2016.
  36. Novais, Ângela. "Silva L, Rodrigues C, Sousa C, Lira A, Leão M, Mota M, Lopes P, Lameirão A, Abreu G, Lopes JA, Novais Â, Peixe L. Real-time Identification Of Carbapenem-resistant Klebsiella pneumoniae Outbreak Isolates By Fourier Transform Infrared (FTIR) Spectroscopy". Paper presented in 11th International Meeting on Microbial Epidemiological Markers (IMMEM XI), 2016.
  37. Novais, Ângela. "Andrade LN, Novais Â, Sousa C, Rodrigues C, Darini AL, Peixe L. Assessment of multidrug-resistant (MDR) Klebsiella pneumoniae population diversity in Brazilian clinical isolates using MLST, wzi sequencing and Fourier Transform Infrared (FTIR) spectroscopy.". Paper presented in Insterscience Conference of Antimicrobial Agents and Chemotherapy/International Congress of Chemotherapy and Infection (ICAAC/ICC), 2015.
  38. Novais, Ângela. "Andrade LN, Joana Mourão, Novais Â, Darini AL, Antunes P, Peixe L. Multidrug-resistant (MDR) Enterobacter cloacae Complex (EcC) Isolates From Oncologic Inpatients Were Associated With Increased Tolerance To Biocides And Heavy Metals.". Paper presented in Insterscience Conference of Antimicrobial Agents and Chemotherapy/International Congress of Chemotherapy and Infection (ICAAC/ICC), 2015.
  39. Novais, Ângela. "Branquinho R, Osório H, Novais A, Sousa C, Peixe L. Salmonella Typhimurium viability biomarkers assessed by MALDI-TOF mass spectrometry.". Paper presented in XXV Congreso Nacional de Microbiología, 2015.
  40. Novais, Ângela. "Mendes AC, Rodrigues C, Moniz S, Campainha R, Amorim J, Novais A, Peixe L. First description of a fosfomycin resistant clinical Escherichia coli isolate harbouring plasmid-borne fosA3 and blaCTX-M-15 in Europe.". Paper presented in 6th Congress of European Microbiologists (FEMS 2015)., 2015.
  41. Novais, Ângela. "9. Andrade L, Novais A, Branquinho R, Peixe L. Species reassignment of Enterobacter cloacae complex isolates by in silico phylogenetic analysis.". Paper presented in 6th Congress of European Microbiologists (FEMS 2015)., 2015.
  42. Novais, Ângela. "Rodrigues C, Branquinho R, Sousa C, Andrade L, Machado E, Darini AL, Novais A, Peixe L. Identification of diverse capsular types in multidrug-resistant (MDR) Klebsiella pneumoniae clones using wzi sequencing and FTIR.". Paper presented in 6th Congress of European Microbiologists (FEMS 2015)., 2015.
  43. Novais, Ângela. "Branquinho R, Osorio H, Novais A, Peixe L, Sousa C. Discrimination of viability status of Salmonella Typhimurium cells induced by distinct inactivation methods using a combined Flow Cytometry, MALDI-TOF MS and MDA approach.". Paper presented in 6th Congress of European Microbiologists (FEMS 2015)., 2015.
  44. Novais, Ângela. "Novais A, Moniz T, Rebelo AR, Silva AMG, Rangel M, Peixe L. Identification of a novel iron chelator compound with promising antibacterial activity against Gram-positive bacteria.". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  45. Novais, Ângela. "Rodrigues, C, Machado E, Fernandes S, Montenegro C, Peixe L, Novais A. An update on faecal carriage of ESBL-producing by Portuguese healthy humans: the emergence of B2-ST131 H30 subclone producing CTX-M-27.". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  46. Novais, Ângela. "Rodrigues, C, Machado E, Fernandes S, Peixe L, Novais A. Occurrence of extended-spectrum beta-lactamases-producing Escherichia coli in Portuguese nursing homes: the spread of different B2-ST131 subclones (H30, H22).". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  47. Novais, Ângela. "Rodrigues C, Sousa C, Machado E, Novais A, Peixe L. Multidrug-resistant (MDR) Klebsiella pneumoniae ST15 isolates: is their genomic plasticity the reason for its success?". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  48. Novais, Ângela. "Mendes AC, Rodrigues C, Ramos H, Peixe L, Novais A. Diversity of platforms linked to VIM-producing K. pneumoniae and E. cloacae complex clinical isolates in Portugal.". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  49. Novais, Ângela. "Gonçalves Ribeiro T, Novais A, Nascimento R, Freitas F, Peixe L, Machado E. Persistence and spread of particular acquired AmpC beta-lactamases linked to Klebsiella pneumoniae ST11 international clone and/or epidemic Incr, IncHI2 or IncI1 plasmids.". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  50. Novais, Ângela. "Andrade L, Novais A, Stegani L, Ferreira J, Ribeiro T, Darini AL, Peixe L. High diversity of population structure, virulence factors and mobile genetic elements in CTX-M-, SHV- and CMY-producing extraintestinal Escherichia coli isolates from large hospitals in Brazil.". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  51. Novais, Ângela. "Andrade L, Novais A, Stegani L, Ferreira J, Rodrigues C, Darini AL, Peixe L. International clones (ST11/340/252, ST15, ST101), epidemic plasmids (IncFIIk, IncR, IncL/M) and virulence factors associated with CTX-M(-15, -8, -2) and KPC-2-producing Klebsiella pneumoniae in Brazil.". Paper presented in 25th European Congress of Clinical Microbiology and Infectious Diseases., 2015.
  52. Novais, Ângela. "Rodrigues C; Machado E; Peixe L; Novais Â. ESBL-producing Enterobacteriaceae other than E. coli in Portuguese hospitals: the spread of epidemic K. pneumoniae clones and plasmids (IncR, IncFIIK, IncL/M).". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  53. Novais, Ângela. "Pires J; Rodrigues C; Campainha R; Moniz S; Amorim J; Peixe .; Novais Â. ESBL-producing E. coli and K. pneumoniae: is the community a reservoir of widespread clones or clonal variants?". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  54. Novais, Ângela. "Pires J; Novais Â; Silva L; Campos J; Botelho J; Czobor I; Gheorghe I; Peixe L. Further validation of Blue-CARBA, a recently described quick and reliable method for carbapenemase detection.". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  55. Novais, Ângela. "Rodrigues C; Novais Â; Sousa C; De Scheerder V; Lopes J; Machado E; Coque T; Cantón R; Peixe L. Discrimination of antibiotic resistant Klebsiella pneumoniae clones by Fourier Transform Infrared Spectroscopy (FTIR).". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  56. Novais, Ângela. "Gonçalves Ribeiro T; Novais Â; Peixe L; Machado E. Diverse non-clinical reservoirs of CTX-M-15-encoding plasmids and clones in a developing country with close relations with Europe.". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  57. Novais, Ângela. "Gheorghe I; Novais A; Grosso F; Rodrigues C; Chifiriuc C; Lazar V; Peixe L. Identification of particular clonal complexes and mobile elements associated with the dissemination of blaOXA-23-carrying Acinetobacter baumannii and blaVIM-2-carrying Pseudomonas aeruginosa in Romania.". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  58. Novais, Ângela. "Czobor I.; Novais Â.; Rodrigues C.; Chifiriuc M.C.; Mihaescu G.; Peixe L. Dissemination of NDM-1 and OXA-48 in Romania is mainly associated with K. pneumoniae ST101 clone and infrequent carbapenemase-harbouring plasmids (NDM-IncFII and OXA-48-non-typeable).". Paper presented in . 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  59. Novais, Ângela. "Novais A; Rodrigues C; Pires J; Peixe L. Comparison of Escherichia coli ST131 H30 subclone with other ST131 variants and B2-non-ST131 isolates.". Paper presented in 24th European Congress of Clinical Microbiology and Infectious Diseases., 2014.
  60. Novais, Ângela. "Pires J, Novais Â, Rodrigues C, Campainha R, Moniz S, Amorim J, Peixe L. 2013. Spread of CTX-M-15 among diverse B2-ST131 and otherA, B1 and D Escherichia coli clones responsible for community-onset infections in Portugal.". Paper presented in MICROBIOTECH '13 - Portuguese Congress of Microbiology and Biotechnology,, 2013.
  61. Novais, Ângela. "Rodrigues C, Machado E, Pires J, Peixe L, Novais Â. Current dissemination of CTX-M-producing Escherichia coli in Portuguese Hospitals is associated with widespread clones from different phylogroups.". Paper presented in MICROBIOTEC'13, 2013.
  62. Novais, Ângela. "Rodrigues C, Sousa C, De Scheerder V, Machado E, Novais Â, Peixe L. Discrimination of clinically relevant Klebsiella pneumoniae clones by Fourier Transform Infrared Spectroscopy (FTIR).". Paper presented in MICROBIOTEC'13, 2013.
  63. Novais, Ângela. "Novais A, Lascasas M, Pires J, Coque TM, Peixe L. Diversity of virulence profiles and adhesion abilities among Escherichia coli A (ST10, ST23) and B1 (ST155, ST359) isolates.". Paper presented in 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  64. Novais, Ângela. "Novais A, Sousa C, Fernandez-Olmos A, Lopes J, Coque TM, Cantón R, Peixe L. Discrimination of major Escherichia coli clones by matrix-assisted laser desorption/ionisation-time of flight mass spectrometry (MALDI-TOF MS).". Paper presented in 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  65. Novais, Ângela. "Sousa C, Novais A, Magalhães A, Lopes J, Peixe L. Quick and reliable discrimination of clinically relevant Escherichia coli clones by Fourier Transform Infrared Spectroscopy (FTIR).". Paper presented in 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  66. Novais, Ângela. "Coque T, Novais A, Rodríguez I, Lira F, Valverde A, Martínez JL, Baquero F, Cantón R. Contribution of IncF(k) plasmids from Klebsiella pneumoniae to the spread and persistence of extended-spectrum beta-lactamase encoding genes.". Paper presented in 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  67. Novais, Ângela. "Goncalves Ribeiro T, Novais A, Novais C, Silva R, Sousa JC, Peixe L, Machado E. High diversity of qnrB genes in Citrobacter freundii complex isolates from an aquatic source.". Paper presented in 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  68. Novais, Ângela. "Rodrigues C, Novais A, Pereira C, Freitas F, Machado E, Peixe L. Occurrence of acquired quinolone- and aminoglycoside-resistance determinants among extended-spectrum beta-lactamases (ESBL)- and qAmpC-producing Enterobacteriaceae clones from Portuguese hospitals.". Paper presented in 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  69. Novais, Ângela. "Rodrigues C, Machado E, Peixe L, Novais A. Emergence of VIM-1-like-producing Klebsiella pneumoniae clones in different Portuguese hospitals.". Paper presented in . 23th European Congress of Clinical Microbiology and Infectious Diseases., 2013.
  70. Novais, Ângela. "Lascasas M, Novais Â, Rodrigues C, Peixe L. Evaluation of adhesion and biofim producing abilities of worldwide spread Escherichia coli A (ST10, ST23) and B1 (ST155, ST359) isolates.". Paper presented in . Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2013,, 2013.
  71. Novais, Ângela. "Magalhães A, Sousa C, Novais Â, Lopes J, Peixe L. Discrimination of Escherichia coli clones by Fourier Transform Infrared Spectroscopy.". Paper presented in Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2013, 2013.
  72. Novais, Ângela. "Coque TM, Lira F, Novais A, Valverde A, Martinez JL, Baquero F, Cantón R. IncF(k) plasmids from Klebsiella pneumoniae and the global spread of extended-spectrum beta-lactam resistance among Enterobacteriaceae.". Paper presented in International Plasmid Biology Conference, 2012.
  73. Novais, Ângela. "Novais Â, Pires J, Montenegro C, Coque TM, Peixe L. Biofilm-production ability of widespread Escherichia coli phylogroup A (ST10, ST23) and B1 (ST155, ST359) lineages". Paper presented in International Congress of the Society for Microbial Ecology and Disease (SOMED 2012)., 2012.
  74. Novais, Ângela. "Rodrigues C, Novais Â, Machado E, Peixe L. on behalf of The Portuguese Resistance Study Group. First report of a new VIM-1 variant identified in a ST15 Klebsiella pneumoniae clone co-producing SHV-12 in Portugal.". Paper presented in International Congress of the Society for Microbial Ecology and Disease (SOMED 2012)., 2012.
  75. Novais, Ângela. "Novais Â, Pires J, Herreira H, Costa L, Montenegro C, Vuotto C, Coque TM, Donelli G, Peixe L. Biofilm-formation ability and diversity of globally spread Escherichia coli ST131 isolates resistant: 1991-2010.". Paper presented in 22th European Congress of Clinical Microbiology and Infectious Diseases., 2012.
  76. Novais, Ângela. "Novais Â, Pires J, Montenegro C, Vuotto C, Donelli G, Coque TM, Peixe L. Diversity and biofilm-production ability of widespread Escherichia coli phylogroup D lineages (ST69, ST393, ST405).". Paper presented in 22th European Congress of Clinical Microbiology and Infectious Diseases., 2012.
  77. Novais, Ângela. "Rodrigues C, Novais Â, Cantón R, Coque TM, Peixe L, Machado E. Spread of IncI-blaTEM-52 and IncN-blaCTX-M-1/-32 among Escherichia coli isolates from Portuguese piggeries.". Paper presented in 22th European Congress of Clinical Microbiology and Infectious Diseases., 2012.
  78. Novais, Ângela. "Rodrigues C, Machado E, Montenegro C, Peixe L, Novais Â. on behalf of The Portuguese Resistance Study Group. High diversity of extended-spectrum beta-lactamases among clinical isolates of Escherichia coli from Portugal.". Paper presented in . 22th European Congress of Clinical Microbiology and Infectious Diseases., 2012.
  79. Novais, Ângela. "Rodrigues C, Machado E, Novais Â, Peixe L. on behalf of The Portuguese Resistance Study Group. Amplification of ST15, ST147 and ST336 Klebsiella pneumoniae clones producing different ESBLs in Portuguese hospitals.". Paper presented in 22th European Congress of Clinical Microbiology and Infectious Diseases., 2012.
  80. Novais, Ângela. "Grosso F, Quinteira S, Novais Â, Peixe L. blaOXA-24/40-carrying plasmids have an important role in the dissemination process of carbapenem-resistant Acinetobacter spp.". Paper presented in 22th European Congress of Clinical Microbiology and Infectious Diseases., 2012.
  81. Novais, Ângela. "Pires J, Novais Â, Peixe L. Diversity and virulence profiles of Escherichia coli ST69, ST393 and ST405 clones.". Paper presented in Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2012, 2012.
  82. Novais, Ângela. "Montenegro C, Peixe L, Novais Â. Biofilm-production ability of widespread Escherichia coli clones.". Paper presented in Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2012, 2012.
  83. Novais, Ângela. "Novais Â, Machado E, Amaral S, Rodrigues C, Gonçalves T, Cantón R, Coque TM, Peixe L. Epidemiological shift and expansion of widespread Escherichia coli clones from Portuguese hospitals.". Paper presented in National Congress MicroBiotec11, 2011.
  84. Novais, Ângela. "Novais Â, Rodrigues C, Branquinho R, Antunes P, Grosso F, Boaventura L, Ribeiro G, Peixe L. Emergence of multiple carbapenem resistant clinical isolates from different Enterobacteriaceae species and widespread clones.". Paper presented in National Congress MicroBiotec11., 2011.
  85. Novais, Ângela. "Pires JP, Novais Â, Peixe L. Clonality and Virulence of UropathogenicEscherichia coli.". Paper presented in National Congress MicroBiotec11., 2011.
  86. Novais, Ângela. "Branquinho, R, Amorim, MM, Novais, Â, Pintado, ME, Peixe, L. Characterization of antibiotic susceptibility profile and of ß-lactamase genes content in Bacillus pumilus from different sources.". Paper presented in National Congress MicroBiotec11., 2011.
  87. Novais, Ângela. "Machado E, Silva V, Rodrigues C, Novais Â, Costa S, Silva R, Cantón R, Coque TM, Peixe L. Ocurrence of ESBLs among Enterobacteriaceae isolates from swine and piggeries environment in Portugal.". Paper presented in National Congress MicroBiotec11., 2011.
  88. Novais, Ângela. "Freitas F, Silva R, Novais Â, Coque TM, Cantón R, Machado E, Peixe L. Phenotypic detection of acquired AmpC beta-lactamases using the phenylboronic acid test.". Paper presented in National Congress MicroBiotec11., 2011.
  89. Novais, Ângela. "Novais Â, Pires J, Coque TM, Peixe L. Diversity within the globally spread Escherichia coli ST131 pathogenic lineage (1991-2010).". Paper presented in 4th FEMS Congress of European Microbiologists., 2011.
  90. Novais, Ângela. "Branquinho, R, Amorim, MM, Novais, Â, Pintado, ME, Peixe, L. Antimicrobial susceptibility and beta-lactamase gene content of bacillus pumilus isolates from different sources.". Paper presented in 4th FEMS Congress of European Microbiologists., 2011.
  91. Novais, Ângela. "Novais A, Machado E, Amaral S, Gonçalves T, Cantón R, Coque TM, Peixe L. Amplification of CTX-M-15-B2-ST131 and emergence of A and D widespread clones producing different ESBLs in Portuguese Hospitals.". Paper presented in 21th European Congress of Clinical Microbiology and Infectious Diseases., 2011.
  92. Novais, Ângela. "Freitas F, Novais A, Gonçalves T, Amaral S, Cantón R, Coque TM, Machado E, Peixe L. Dissemination of DHA-1 and CMY-2 beta-lactamases among Klebsiella spp. And E. coli from Portuguese clinical settings.". Paper presented in 21th European Congress of Clinical Microbiology and Infectious Diseases., 2011.
  93. Novais, Ângela. "Freitas F, Silva R, Novais A, Coque TM, Cantón R, Machado E, Peixe L. Evaluation of a confirmatory test for phenotypic detection of acquired AmpC beta-lactamases.". Paper presented in 21th European Congress of Clinical Microbiology and Infectious Diseases., 2011.
  94. Novais, Ângela. "González-Candelas, Novais A, Comas I, Baquero F, Cantón R, Coque TM, Moya A, Galán JC. Evolución de las beta-lactamases del grupo CTX-M-1: predicción de la resistencia a antibóticos.". Paper presented in XVIII Seminatio de Genetica de Poblaciones y Evolución., 2010.
  95. Novais, Ângela. "Novais A, Viana D, Baquero F, Cantón R, Coque TM. Spread and evolution of ST131 and IncFII-blaCTX-M-15 and emergence of IncA/C-blaCTX-M-15 and IncN-blaCTX-M-28 plasmids in widespread Escherichia coli clones.". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases., 2010.
  96. Novais, Ângela. "Novais A, Viana D, Baquero F, Cantón R, Coque TM. Contemporary spread of CTX-M-14-Escherichia coli in Spain is mainly associated with persistent IncK and IncI1 and emerging IncN plasmids". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases., 2010.
  97. Novais, Ângela. "Ripoll A, Rodríguez-Domínguez M, Novais A, Turrientes MC, Baquero F, Cantón R, Galán JC. Mutational changes in different CTX-M beta-lactamases able to confer resistance to amoxicillin-clavulanate combination.". Paper presented in 20th European Congress of Clinical Microbiology and Infectious Diseases., 2010.
  98. Novais, Ângela. "Novais A, Machado E, Cantón R, Peixe L, Baquero F, Coque TM. Diversity of Tn402 defective variants associated with class 1 integrons.". Paper presented in 19th European Congress of Clinical Microbiology and Infectious Diseases., 2009.
  99. Novais, Ângela. "Novais A, Machado E, Cantón R, Peixe L, Baquero F, Coque TM. Characterization of Tn402 variants from human Enterobacteriaceae isolates (1988-2003).". Paper presented in 3rd FEMS Congress of European Microbiologists., 2009.
  100. Novais, Ângela. "Machado E, Amaral S, Ferreira R, Silva R, Novais A, Faria C, Grañeda JL, Cantón R, Coque TM, Peixe L. Emergence of CTX-M-28-producing Enterobacteriaceae in Portugal.". Paper presented in 3rd FEMS Congress of European Microbiologists., 2009.
  101. Novais, Ângela. "Novais A, Cantón R, Valverde A, Baquero F, Coque TM. Dispersal and persistence of TEM-4 in Spain: a plasmid-clone paradigm.". Paper presented in 19th European Congress of Clinical Microbiology and Infectious Diseases., 2009.
  102. Novais, Ângela. "Curiao T, Cantón R, Novais A, Baquero F, Coque TM. The genetic environment influencing selection and persistence of sul2 in clinical isolates.". Paper presented in 19th European Congress of Clinical Microbiology and Infectious Diseases., 2009.
  103. Novais, Ângela. "Tato M, Gómez G. de la Pedrosa G, Valverde A, Novais A, Baquero F, Coque TM, Cantón R. Assessment of a polyclonal ESBL-producing Escherichia coli population with a commercial semiautomated rep-PCR typing technique.". Paper presented in . 48th Interscience Conference on Antimicrobial Agents and Chemotherapy., 2008.
  104. Novais, Ângela. "Ripoll A, Rodríguez-Domínguez M, Novais A, Coque TM, Cantón R, Baquero F, Turrientes MC, Galán JC. Diferencias en el coste relativo entre plásmidos relacionados con la diseminación mundial de la beta-lactamasa de espectro extendido CTX-M-15.". Paper presented in VII Reunión del grupo de microbiología molecular de la SEM., 2008.
  105. Novais, Ângela. "Novais A, Cantón R, Valverde A, Baquero F, Coque TM. La diseminación y persistencia de TEM-4 en España se asocia a clones persistentes de E. coli y K. pneumoniae y plásmidos epidémicos de la familia repFIIA.". Paper presented in XIII Congreso de la Sociedad Española de de Enfermedades Infeccionas y Microbiología Clínica., 2008.
  106. Novais, Ângela. "Novais A, Cantón R, Machado E, Curiao T, Baquero F, Peixe L, Coque TM. International dissemination of a multi-resistant IncA/C2 plasmid containing blaTEM-24, Tn21 and Tn1696 among epidemic and non-epidemic Enterobacteriaceae species.". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases., 2008.
  107. Novais, Ângela. "Tedim Pedrosa A, Novais A, Machado E, Cantón R, Peixe L, Coque TM. Recent Dissemination of blaTEM-52-producing Enterobacteriaceae in Portugal is caused by spread of IncI1 plasmids among Escherichia coli and Klebsiella pneumoniae clones.". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases., 2008.
  108. Novais, Ângela. "Valverde A, Cantón R, Novais A, Galán JC, Baquero F, Coque TM. High prevalence of blaCTX-M-14 in Spain is mainly associated with the dissemination of an epidemic plasmid belonging to IncI complex.". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases., 2008.
  109. Novais, Ângela. "Antunes P, Novais A, Coque TM, Peixe L. Replicon typing of plasmids carrying the sul3-atypical integrons and class 1 integrons among Salmonella isolates.". Paper presented in 18th European Congress of Clinical Microbiology and Infectious Diseases., 2008.
  110. Novais, Ângela. "Novais A, Cantón R, Machado E, Peixe L, Baquero F, Coque TM. International Dissemination of Extended-Spectrum Beta -Lactamase TEM-24 among Enterobacteriaceae species is caused by spread of both epidemic IncA/C2 plasmid and strains.". Paper presented in 17th European Congress of Clinical Microbiology and Infectious Diseases., 2007.
  111. Novais, Ângela. "Curiao T, Tato M, Valverde A, Novais A, Baquero F, Coque TM, and Canton R. Prevalence of fecal carriage of metallo-beta-lactamase producing Enterobacteriaceae in a Spanish hospital.". Paper presented in 17th European Congress of Clinical Microbiology and Infectious Diseases., 2007.
  112. Novais, Ângela. "Machado E, Curiao T, Peixe L, Novais A, Cantón R, Baquero F, Coque TM. Dissemination of sulfonamide resistance genes (sul1, sul2 and sul3) among extended-spectrum beta-lactamase ESBL-producing Enterobacteriaceae.". Paper presented in . 17th European Congress of Clinical Microbiology and Infectious Diseases., 2007.
  113. Novais, Ângela. "Valverde A, Canton R, Novais A, Baquero F, Coqu TM. Genetic diversity of SHV-12 producing isolates from the community and nosocomial settings.". Paper presented in 17th European Congress of Clinical Microbiology and Infectious Diseases., 2007.
  114. Novais, Ângela. "Novais A, Cantón R, Valverde A, Baquero F, Coque TM. Trade-offs between Escherichia coli phylogenetic groups and plasmid types in the dissemination of Extended-Spectrum b-lactamases (ESBL).". Paper presented in 46th Interscience Conference on Antimicrobial Agents and Chemotherapy., 2006.
  115. Novais, Ângela. "Novais A, Cantón R, Valverde A, Baquero F, Coque TM. Population structure of Extended-Spectrum ß-lactamase (ESBL) producing Escherichia coli.". Paper presented in 2nd FEMS Congress of European Microbiologists., 2006.
  116. Novais, Ângela. "Valverde A, Cantón R, Novais A, Baquero F, Coque TM. Dispersión nosocomial alodémica de Klebsiella pneumoniae productora de SHV-12 asociada a diferentes plásmidos.". Paper presented in XII Congreso Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (SEIMC)., 2006.
  117. Novais, Ângela. "Novais A, Cantón R, Valverde A, Galán JC, Machado E, Peixe L, Carattoli A, Baquero F, Coque TM. Identificación de blaCTX-M-9 en diferentes variantes de Tn402 y Tn21 asociadas a Plásmidos de Incompatibilidad Clásicos (IncH12, IncP-1a).". Paper presented in XII Congreso Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (SEIMC)., 2006.
  118. Novais, Ângela. "Novais A, Cantón R, Moreira R, Baquero F, Coque TM. Molecular characterization of Enterobacteriaceae producing CTX-M-1-like ESBL (CTX-M-1, -3, -15, and -32) in Madrid, Spain (2000-2002).". Paper presented in 16th European Congress of Clinical Microbiology and Infectious Diseases., 2006.
  119. Novais, Ângela. "Valverde A, Coque TM, Novais A, Galán JC, Baquero F, Cantón R. High clonal and plasmid diversity of CTX-M-14 and SHV-12 producing isolates in the community.". Paper presented in 16th European Congress of Clinical Microbiology and Infectious Diseases., 2006.
  120. Novais, Ângela. "Novais A, Cantón R, Valverde A, Machado E, Galán JC, Peixe L, Baquero F, Coque TM. blaCTX-M-9 is Located in a High Diversity of Class 1 integrons Containing ORF513 and Associated to Defective Transposon Derivatives from Tn402.". Paper presented in 45th Interscience Conference on Antimicrobial Agents and Chemotherapy., 2005.
  121. Novais, Ângela. "Novais A, Cantón R, Galán JC, Valverde A, Machado E, Baquero F, Coque TM. High Diversity of Genetic Elements Associated with CTX-M-9-producing Enterobacteriaceae clinical isolates from Spain.". Paper presented in 15th European Congress of Clinical Microbiology and Infectious Diseases., 2005.
  122. Novais, Ângela. "Valverde A, Cantón R, Galán JC, Novais A, Baquero F, Coque TM. First description of blaCTX-M-2 producing isolate in Spain and characterization of its genetic environment.". Paper presented in 15th European Congress of Clinical Microbiology and Infectious Diseases., 2005.
  123. Novais, Ângela. "Machado E, Cantón R, Ferreira J, Novais A, Baquero F, Peixe L, Coque TM. Low Diversity of integrons among non-Escherichia coli Enterobacteriaceae clinical isolates producing Extended-Spectrum Beta-Lactamases (ESBL) from Spain.". Paper presented in 15th European Congress of Clinical Microbiology and Infectious Diseases., 2005.
  124. Novais, Ângela. "Valverde A, Coque TM, Natal N, Novais A, Rollán A, Baquero F, Cantón R. Extended-spectrum ß-lactamases in Klebsiella pneumoniae e isolates from the Ramón y Cajal Hospital in Madrid: an up-dated complex situation (2001-2003).". Paper presented in 14th European Congress of Clinical Microbiology and Infectious Diseases, 2004.
  125. Novais, Ângela. "Sousa C, Rodrigues C, De Scheerder V, Machado E, Novais A, Peixe L. Fourier Transform Infrared Spectroscopy (FTIR) as an alternative epidemiological typing tool for discrimination of Klebsiella pneumoniae clones.". Paper presented in 10th International Meeting on Microbial Epidemiological Markers (IMMEM-10)., 2003.
Journal article
  1. Ângela Novais; Ana Beatriz Gonçalves; Teresa G. Ribeiro; Ana R. Freitas; Gema Méndez; Luis Mancera; Antónia Read; et al. "Development and validation of a quick, automated, and reproducible ATR FT-IR spectroscopy machine-learning model for Klebsiella pneumoniae typing". Journal of Clinical Microbiology (2024): https://doi.org/10.1128/jcm.01211-23.
    10.1128/jcm.01211-23
  2. Zaman, Kamran; Khan, Siraj Ahmed; Chaturongakul, Soraya; Sahoo, Biswajeet; Novais, Ângela. "Editorial: One Health approaches to combat infectious diseases". Frontiers in Microbiology 14 (2023): http://dx.doi.org/10.3389/fmicb.2023.1321134.
    10.3389/fmicb.2023.1321134
  3. Michele Loiodice; Manuela Ribeiro; Luísa Peixe; Ângela Novais. "Emergence of NDM-1 and KPC-3 carbapenemases in Kluyvera cryocrescens: Investigating genetic heterogeneity and acquisition routes of blaNDM-1 in Enterobacterales species in Portugal". Journal of Global Antimicrobial Resistance (2023): https://doi.org/10.1016/j.jgar.2023.07.008.
    10.1016/j.jgar.2023.07.008
  4. Joana Mourão; Marisa Ribeiro-Almeida; Carla Novais; Mafalda Magalhães; Andreia Rebelo; Sofia Ribeiro; Luísa Peixe; et al. "From Farm to Fork: Persistence of Clinically Relevant Multidrug-Resistant and Copper-Tolerant Klebsiella pneumoniae Long after Colistin Withdrawal in Poultry Production". Microbiology Spectrum (2023): https://doi.org/10.1128/spectrum.01386-23.
    10.1128/spectrum.01386-23
  5. Carla Rodrigues; Val F. Lanza; Luísa Peixe; Teresa M. Coque; Ângela Novais; Ruth M. Hall. "Phylogenomics of Globally Spread Clonal Groups 14 and 15 of Klebsiella pneumoniae". Microbiology Spectrum (2023): https://doi.org/10.1128/spectrum.03395-22.
    10.1128/spectrum.03395-22
  6. Werner, Guido; Couto, Natacha; Feil, Edward J.; Novais, Angela; Hegstad, Kristin; Howden, Benjamin P.; Friedrich, Alexander W.; Reuter, Sandra. "Taking hospital pathogen surveillance to the next level". Microbial Genomics 9 4 (2023): http://dx.doi.org/10.1099/mgen.0.001008.
    10.1099/mgen.0.001008
  7. João Pedro Rueda Furlan; Teresa Gonçalves Ribeiro; Ângela Novais; Hamilton Cabral; Luísa Peixe; Eliana Guedes Stehling. "Citrobacter meridianamericanus sp. nov., isolated from a soil sample". International Journal of Systematic and Evolutionary Microbiology (2023): https://doi.org/10.1099/ijsem.0.005720.
    10.1099/ijsem.0.005720
  8. Miguel Peixoto de Almeida; Carla Rodrigues; Ângela Novais; Filipa Grosso; Nicolae Leopold; Luísa Peixe; Ricardo Franco; Eulália Pereira. "Silver Nanostar-Based SERS for the Discrimination of Clinically Relevant Acinetobacter baumannii and Klebsiella pneumoniae Species and Clones". Biosensors (2023): https://doi.org/10.3390/bios13020149.
    10.3390/bios13020149
  9. João Pedro Rueda Furlan; Eliana Guedes Stehling; Eduardo Angelino Savazzi; Luísa Peixe; Ângela Novais. "High occurrence of colistin- and multidrug-resistant strains carrying mcr-1 or an underestimated mcr-1.26 allelic variant along a large Brazilian river". Journal of Global Antimicrobial Resistance (2022): https://doi.org/10.1016/j.jgar.2022.05.030.
    10.1016/j.jgar.2022.05.030
  10. Inês Martins-Oliveira; Blanca Pérez-Viso; Ana Silva-Dias; Rosário Gomes; Luísa Peixe; Ângela Novais; Rafael Cantón; Cidália Pina-Vaz. "Rapid Detection of Plasmid AmpC Beta-Lactamases by a Flow Cytometry Assay". Antibiotics (2022): https://doi.org/10.3390/antibiotics11081130.
    10.3390/antibiotics11081130
  11. Ribeiro-Almeida, Marisa; Mourão, Joana; Novais, Ângela; Pereira, Sofia; Freitas-Silva, Joana; Ribeiro, Sofia; Martins da Costa, Paulo; Peixe, Luísa; Antunes, Patrícia. "High diversity of pathogenic Escherichia coli clones carrying mcr-1 among gulls underlines the need for strategies at the environment¿livestock¿human interface". Environmental Microbiology 24 10 (2022): 4702-4713. http://dx.doi.org/10.1111/1462-2920.16111.
    10.1111/1462-2920.16111
  12. Novais, Ângela; Ferraz, Rita Veiga; Viana, Mariana; da Costa, Paula Martins; Peixe, Luísa. "NDM-1 Introduction in Portugal through a ST11 KL105 Klebsiella pneumoniae Widespread in Europe". Antibiotics 11 1 (2022): 92. http://dx.doi.org/10.3390/antibiotics11010092.
    10.3390/antibiotics11010092
  13. Ksiezarek, Magdalena; Novais, Ângela; Peixe, Luísa. "The Darkest Place Is under the Candlestick-Healthy Urogenital Tract as a Source of Worldwide Disseminated Extraintestinal Pathogenic Escherichia coli Lineages". Microorganisms 10 1 (2021): 27. http://dx.doi.org/10.3390/microorganisms10010027.
    10.3390/microorganisms10010027
  14. Sofia Ribeiro; Joana Mourão; Ângela Novais; Joana Campos; Luísa Peixe; Patrícia Antunes. "From farm to fork: Colistin voluntary withdrawal in Portuguese farms reflected in decreasing occurrence of mcr-1- carrying Enterobacteriaceae from chicken meat". Environmental Microbiology 23 12 (2021): 7563-7577. https://doi.org/10.1111/1462-2920.15689.
    10.1111/1462-2920.15689
  15. Baquero, Fernando; Martínez, José L.; Novais, Ângela; Rodríguez-Beltrán, Jerónimo; Martínez-García, Laura; Coque, Teresa M.; Galán, Juan Carlos. "Allogenous Selection of Mutational Collateral Resistance: Old Drugs Select for New Resistance Within Antibiotic Families". Frontiers in Microbiology 12 (2021): http://dx.doi.org/10.3389/fmicb.2021.757833.
    10.3389/fmicb.2021.757833
  16. Ksiezarek, Magdalena; Novais, Ângela; Felga, Helena; Mendes, Fátima; Escobar, Marta; Peixe, Luísa. "Phylogenomic analysis of a highly virulent Escherichia coli ST83 lineage with potential animal-human transmission". Microbial Pathogenesis 155 (2021): 104920. http://dx.doi.org/10.1016/j.micpath.2021.104920.
    10.1016/j.micpath.2021.104920
  17. Antunes, Patrícia; Novais, Carla; Novais, Ângela; Grosso, Filipa; Ribeiro, Teresa G; Mourão, Joana; Perovic, Svetlana; et al. "MicroMundo@UPorto: an experimental microbiology project fostering student's antimicrobial resistance awareness and personal and social development". FEMS Microbiology Letters (2021): http://dx.doi.org/10.1093/femsle/fnab016.
    Published • 10.1093/femsle/fnab016
  18. "Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae". European Journal of Clinical Microbiology & Infectious Diseases 39 12 (2020): 2471-2475. http://dx.doi.org/10.1007/s10096-020-03956-y.
    10.1007/s10096-020-03956-y
  19. Guerra, Ana Margarida; Lira, Agostinho; Lameirão, Angelina; Selaru, Aurélia; Abreu, Gabriela; Lopes, Paulo; Mota, Margarida; Novais, Ângela; Peixe, Luísa. "Multiplicity of Carbapenemase-Producers Three Years after a KPC-3-Producing K. pneumoniae ST147-K64 Hospital Outbreak". Antibiotics 9 11 (2020): 806. http://dx.doi.org/10.3390/antibiotics9110806.
    10.3390/antibiotics9110806
  20. Silva, Liliana; Rodrigues, Carla; Lira, Agostinho; Leão, Mariana; Mota, Margarida; Lopes, Paulo; Novais, Ângela; Peixe, Luísa. "Fourier transform infrared (FT-IR) spectroscopy typing: a real-time analysis of an outbreak by carbapenem-resistant Klebsiella pneumoniae". European Journal of Clinical Microbiology & Infectious Diseases 39 12 (2020): 2471-2475. http://dx.doi.org/10.1007/s10096-020-03956-y.
  21. Gonçalves Ribeiro, Teresa; Novais, Ângela; Machado, Elisabete; Peixe, Luísa. "Acquired AmpC ß-Lactamases among Enterobacteriaceae from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal". Pathogens 9 4 (2020): 273. http://dx.doi.org/10.3390/pathogens9040273.
    10.3390/pathogens9040273
  22. Rodrigues, Carla; Sousa, Clara; Lopes, João A.; Novais, Ângela; Peixe, Luísa. "A Front Line on Klebsiella pneumoniae Capsular Polysaccharide Knowledge: Fourier Transform Infrared Spectroscopy as an Accurate and Fast Typing Tool". mSystems 5 2 (2020): http://dx.doi.org/10.1128/msystems.00386-19.
    10.1128/msystems.00386-19
  23. Loras, Cristina; Mendes, Ana Constança; Peixe, Luisa; Novais, Ângela; Alós, Juan-Ignacio. "Escherichia coli resistant to fosfomycin from urinary tract infections: Detection of the fosA3 gene in Spain". Journal of Global Antimicrobial Resistance (2020): http://dx.doi.org/10.1016/j.jgar.2020.01.023.
    Open access • Accepted • 10.1016/j.jgar.2020.01.023
  24. Trigo da Roza, Filipa; Couto, Natacha; Carneiro, Carla; Cunha, Eva; Rosa, Teresa; Magalhães, Mariana; Tavares, Luís; et al. "Commonality of Multidrug-Resistant Klebsiella pneumoniae ST348 Isolates in Horses and Humans in Portugal". Frontiers in Microbiology 10 (2019): http://dx.doi.org/10.3389/fmicb.2019.01657.
    10.3389/fmicb.2019.01657
  25. Novais Â; Freitas AR; Rodrigues C; Peixe L. "Fourier transform infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing.". European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology (2018): http://europepmc.org/abstract/med/30483997.
    10.1007/s10096-018-3431-3
  26. Andrade, L.N.; Novais, Â.; Stegani, L.M.M.; Ferreira, J.C.; Rodrigues, C.; Darini, A.L.C.; Peixe, L.. "Virulence genes, capsular and plasmid types of multidrug-resistant CTX-M(-2, -8, -15) and KPC-2-producing Klebsiella pneumoniae isolates from four major hospitals in Brazil". Diagnostic Microbiology and Infectious Disease 91 2 (2018): 164-168. http://www.scopus.com/inward/record.url?eid=2-s2.0-85042078559&partnerID=MN8TOARS.
    10.1016/j.diagmicrobio.2018.01.007
  27. Mendes, A.C.; Novais, Â.; Campos, J.; Rodrigues, C.; Santos, C.; Antunes, P.; Ramos, H.; Peixe, L.. "mcr-1 in carbapenemase-producing Klebsiella pneumoniae with hospitalized patients, Portugal, 2016-2017". Emerging Infectious Diseases 24 4 (2018): 762-766. http://www.scopus.com/inward/record.url?eid=2-s2.0-85044177843&partnerID=MN8TOARS.
    10.3201/eid2404.171787
  28. Novais, Â.; Moniz, T.; Rebelo, A.R.; Silva, A.M.G.; Rangel, M.; Peixe, L.. "New fluorescent rosamine chelator showing promising antibacterial activity against Gram-positive bacteria". Bioorganic Chemistry 79 (2018): 341-349. http://www.scopus.com/inward/record.url?eid=2-s2.0-85047632365&partnerID=MN8TOARS.
    10.1016/j.bioorg.2018.05.013
  29. RODRIGUES, C.; MACHADO, E.; FERNANDES, S.; PEIXE, L.; NOVAIS, Â.. "Different Escherichia coli B2-ST131 clades (B and C) producing extended-spectrum ß-lactamases (ESBL) colonizing residents of Portuguese nursing homes". Epidemiology and Infection (2017): 1-4. http://www.scopus.com/inward/record.url?eid=2-s2.0-85032210173&partnerID=MN8TOARS.
    10.1017/S0950268817002266
  30. Ribeiro, T.G.; Gonçalves, B.R.; da Silva, M.S.; Novais, Â.; Machado, E.; Carriço, J.A.; Peixe, L.. "Citrobacter portucalensis sp. Nov., isolated from an aquatic sample". International Journal of Systematic and Evolutionary Microbiology 67 9 (2017): 3513-3517. http://www.scopus.com/inward/record.url?eid=2-s2.0-85029592571&partnerID=MN8TOARS.
    10.1099/ijsem.0.002154
  31. Rodrigues, C.; Novais, Â.; Sousa, C.; Ramos, H.; Coque, T.M.; Cantón, R.; Lopes, J.A.; Peixe, L.. "Elucidating constraints for differentiation of major human Klebsiella pneumoniae clones using MALDI-TOF MS". European Journal of Clinical Microbiology and Infectious Diseases 36 2 (2017): 379-386. http://www.scopus.com/inward/record.url?eid=2-s2.0-84994337308&partnerID=MN8TOARS.
    10.1007/s10096-016-2812-8
  32. Rodrigues, C.; Mendes, A.C.; Sima, F.; Bavlovic, J.; Machado, E.; Novais, A.; Peixe, L.. "Long-Term Care Facility (LTCF) Residents Colonized with Multidrug-Resistant (MDR) Klebsiella pneumoniae Lineages Frequently Causing Infections in Portuguese Clinical Institutions". Infection Control and Hospital Epidemiology 38 9 (2017): 1127-1130. http://www.scopus.com/inward/record.url?eid=2-s2.0-85025177599&partnerID=MN8TOARS.
    10.1017/ice.2017.144
  33. Rodrigues, Carla; Machado, Elisabete; Fernandes, Sofia; Peixe, Luísa; Novais, Ângela. "An update on faecal carriage of ESBL-producing Enterobacteriaceae by Portuguese healthy humans: detection of theH30 subclone of B2-ST131Escherichia coliproducing CTX-M-27: Table 1.". Journal of Antimicrobial Chemotherapy 71 4 (2016): 1120-1122. http://dx.doi.org/10.1093/jac/dkv443.
    10.1093/jac/dkv443
  34. Mendes, A.C.; Rodrigues, C.; Pires, J.; Amorim, J.; Ramos, M.H.; Novais, Â.; Peixe, L.. "Importation of fosfomycin resistance fosA3 gene to Europe". Emerging Infectious Diseases 22 2 (2016): 346-348. http://www.scopus.com/inward/record.url?eid=2-s2.0-84955089604&partnerID=MN8TOARS.
    10.3201/eid2202.151301
  35. Ribeiro, T.G.; Novais, Â.; Peixe, L.; Machado, E.. "Atypical epidemiology of CTX-M-15 among Enterobacteriaceae from a high diversity of non-clinical niches in Angola". Journal of Antimicrobial Chemotherapy 71 5 (2016): 1169-1173. http://www.scopus.com/inward/record.url?eid=2-s2.0-84965079948&partnerID=MN8TOARS.
    10.1093/jac/dkv489
  36. Czobor, I.; Novais, Â.; Rodrigues, C.; Chifiriuc, M.C.; Mihaescu, G.; Lazar, V.; Peixe, L.. "Efficient transmission of IncFIIYand IncL plasmids and Klebsiella pneumoniae ST101 clone producing OXA-48, NDM-1 or OXA-181 in Bucharest hospitals". International Journal of Antimicrobial Agents 48 2 (2016): 223-224. http://www.scopus.com/inward/record.url?eid=2-s2.0-84979730210&partnerID=MN8TOARS.
    10.1016/j.ijantimicag.2016.05.004
  37. Rodrigues, C.; Bavlovic, J.; Machado, E.; Amorim, J.; Peixe, L.; Novais, Â.. "KPC-3-producing Klebsiella pneumoniae in Portugal linked to previously circulating non-CG258 lineages and uncommon genetic platforms (Tn4401d-IncFIA and Tn4401d-IncN)". Frontiers in Microbiology 7 JUN (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-84980390691&partnerID=MN8TOARS.
    10.3389/fmicb.2016.01000
  38. Novais, Ângela; Novais, A.; Brilhante, M.; Pires, J.; Peixe, L.. "Evaluation of the recently launched Rapid CARB Blue kit for detection of carbapenemase-producing Gram negative bacteria". Journal of Clinical Microbiology 53 9 (2015): 3105-3107. http://www.ncbi.nlm.nih.gov/pubmed/26179299.
    doi:10.1128/JCM.01170-15
  39. Rodrigues, Carla; Machado, Elisabete; Pires, João; Ramos, Helena; Novais, Ângela; Peixe, Luísa. "Increase of widespread A, B1 and D Escherichia coli clones producing a high diversity of CTX-M-types in a Portuguese hospital". Future Microbiology 10 7 (2015): 1125-1131. http://dx.doi.org/10.2217/fmb.15.38.
    10.2217/fmb.15.38
  40. Ribeiro, T.G.; Novais, A.; Branquinho, R.; Machado, E.; Peixe, L.; Novais, Ângela. "Phylogeny and comparative genomics unveil independent diversification trajectories of qnrB and genetic platforms within particular Citrobacter species". Antimicrobial Agents and Chemotherapy 59 10 (2015): 5951-5958. http://www.scopus.com/inward/record.url?eid=2-s2.0-84942291913&partnerID=MN8TOARS.
    10.1128/AAC.00027-15
  41. Rodríguez, I.; Novais, Â.; Lira, F.; Valverde, A.; Curião, T.; Martínez, J.L.; Baquero, F.; Cantón, R.; Coque, T.M.. "Antibiotic-resistant Klebsiella pneumoniae and escherichia coli high-risk clones and an IncFIIkmosaic plasmid hosting Tn1 (blaTEM-4)in isolates from 1990 to 2004". Antimicrobial Agents and Chemotherapy 59 5 (2015): 2904-2908. http://www.scopus.com/inward/record.url?eid=2-s2.0-84931275171&partnerID=MN8TOARS.
    10.1128/AAC.00296-15
  42. Novais, Â.; Sousa, C.; de Dios Caballero, J.; Fernandez-Olmos, A.; Lopes, J.; Ramos, H.; Coque, T. M.; Cantón, R.; Peixe, L.. "MALDI-TOF mass spectrometry as a tool for the discrimination of high-risk Escherichia coli clones from phylogenetic groups B2 (ST131) and D (ST69, ST405, ST393)". European Journal of Clinical Microbiology & Infectious Diseases 33 8 (2014): 1391-1399. http://dx.doi.org/10.1007/s10096-014-2071-5.
    10.1007/s10096-014-2071-5
  43. Rodrigues, C.; Machado, E.; Ramos, H.; Peixe, L.; Novais, Â.. "Expansion of ESBL-producing Klebsiella pneumoniae in hospitalized patients: A successful story of international clones (ST15, ST147, ST336) and epidemic plasmids (IncR, IncFII<inf>K</inf>)". International Journal of Medical Microbiology 304 8 (2014): 1100-1108. http://www.scopus.com/inward/record.url?eid=2-s2.0-84940166331&partnerID=MN8TOARS.
    10.1016/j.ijmm.2014.08.003
  44. Rodrigues, C.; Novais, A.; Machado, E.; Peixe, L.. "Detection of VIM-34, a novel VIM-1 variant identified in the intercontinental ST15 Klebsiella pneumoniae clone". Journal of Antimicrobial Chemotherapy 69 1 (2014): 274-275. http://www.scopus.com/inward/record.url?eid=2-s2.0-84890342175&partnerID=MN8TOARS.
    10.1093/jac/dkt314
  45. Freitas, F.; Machado, E.; Ribeiro, T.G.; Novais, Â.; Peixe, L.. "Long-term dissemination of acquired AmpC ß-lactamases among Klebsiella spp. and Escherichia coli in Portuguese clinical settings". European Journal of Clinical Microbiology and Infectious Diseases 33 4 (2014): 551-558. http://www.scopus.com/inward/record.url?eid=2-s2.0-84896975447&partnerID=MN8TOARS.
    10.1007/s10096-013-1983-9
  46. Gheorghe, I.; Novais, A.; Grosso, F.; Rodrigues, C.; Chifiriuc, M.C.; Lazar, V.; Peixe, L.. "Snapshot on carbapenemase-producing pseudomonas aeruginosa and acinetobacter baumannii in bucharest hospitals reveals unusual clones and novel genetic surroundings for bla<inf>OXA-23</inf>". Journal of Antimicrobial Chemotherapy 70 4 (2014): 1016-1020.
    10.1093/jac/dku527
  47. Sousa, C.; Novais, Â.; Magalhães, A.; Lopes, J.; Peixe, L.. "Diverse high-risk B2 and D Escherichia coli clones depicted by Fourier Transform Infrared Spectroscopy". Scientific Reports 3 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84888265708&partnerID=MN8TOARS.
    10.1038/srep03278
  48. Antunes, P.; Mourão, J.; Alves, T.; Campos, J.; Novais, C.; Novais, Â.; Peixe, L.. "Salmonella enterica serotype Bovismorbificans, a new host for CTX-M-9". International Journal of Antimicrobial Agents 41 1 (2013): 91-93. http://www.scopus.com/inward/record.url?eid=2-s2.0-84871652073&partnerID=MN8TOARS.
    10.1016/j.ijantimicag.2012.09.009
  49. Novais, Â.; Vuotto, C.; Pires, J.; Montenegro, C.; Donelli, G.; Coque, T.M.; Peixe, L.. "Diversity and biofilm-production ability among isolates of Escherichia coli phylogroup D belonging to ST69, ST393 and ST405 clonal groups". BMC Microbiology 13 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84879096132&partnerID=MN8TOARS.
    10.1186/1471-2180-13-144
  50. Pires, J.; Novais, A.; Peixe, L.. "Blue-Carba, an easy biochemical test for detection of diverse Carbapenemase producers directly from bacterial cultures". Journal of Clinical Microbiology 51 12 (2013): 4281-4283. http://www.scopus.com/inward/record.url?eid=2-s2.0-84889799904&partnerID=MN8TOARS.
    10.1128/JCM.01634-13
  51. Rodrigues, C.; Machado, E.; Peixe, L.; Novais, A.. "IncI1/ST3 and IncN/ST1 plasmids drive the spread of blaTEM-52and blaCTX-M-1/-32in diverse Escherichia coli clones from different piggeries". Journal of Antimicrobial Chemotherapy 68 10 (2013): 2245-2248. http://www.scopus.com/inward/record.url?eid=2-s2.0-84888249772&partnerID=MN8TOARS.
    10.1093/jac/dkt187
  52. Novais, Â.; Pires, J.; Ferreira, H.; Costa, L.; Montenegro, C.; Vuotto, C.; Donelli, G.; Coque, T.M.; Peixe, L.. "Characterization of globally spread Escherichia coli ST131 isolates (1991 to 2010)". Antimicrobial Agents and Chemotherapy 56 7 (2012): 3973-3976. http://www.scopus.com/inward/record.url?eid=2-s2.0-84862526675&partnerID=MN8TOARS.
    10.1128/AAC.00475-12
  53. Novais, Â.; Rodrigues, C.; Branquinho, R.; Antunes, P.; Grosso, F.; Boaventura, L.; Ribeiro, G.; Peixe, L.. "Spread of an OmpK36-modified ST15 Klebsiella pneumoniae variant during an outbreak involving multiple carbapenem-resistant Enterobacteriaceae species and clones". European Journal of Clinical Microbiology and Infectious Diseases 31 11 (2012): 3057-3063. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867994178&partnerID=MN8TOARS.
    10.1007/s10096-012-1665-z
  54. Novais, Â.; Viana, D.; Baquero, F.; Martínez-Botas, J.; Cantón, R.; Coque, T.M.. "Contribution of IncFII and broad-host IncA/C and IncN plasmids to the local expansion and diversification of phylogroup B2 Escherichia coli ST131 clones carrying blaCTX-M-15and qnrS1 genes". Antimicrobial Agents and Chemotherapy 56 5 (2012): 2763-2766. http://www.scopus.com/inward/record.url?eid=2-s2.0-84860113832&partnerID=MN8TOARS.
    10.1128/AAC.06001-11
  55. Grosso, F.; Quinteira, S.; Poirel, L.; Novais, Â.; Peixe, L.. "Role of common blaOXA-24/OXA-40-carrying platforms and plasmids in the spread of OXA-24/OXA-40 among Acinetobacter species clinical isolates". Antimicrobial Agents and Chemotherapy 56 7 (2012): 3969-3972. http://www.scopus.com/inward/record.url?eid=2-s2.0-84862529498&partnerID=MN8TOARS.
    10.1128/AAC.06255-11
  56. Ripoll, A.; Baquero, F.; Novais, A.; Rodríguez-Domínguez, M.J.; Turrientes, M.-C.; Cantón, R.; Galán, J.-C.. "In vitro selection of variants resistant to ß-lactams plus ß-lactamase inhibitors in CTX-M ß-lactamases: Predicting the in vivo scenario?". Antimicrobial Agents and Chemotherapy 55 10 (2011): 4530-4536. http://www.scopus.com/inward/record.url?eid=2-s2.0-80052824532&partnerID=MN8TOARS.
    10.1128/AAC.00178-11
  57. Novais, Â.; Comas, I.; Baquero, F.; Cantón, R.; Coque, T.M.; Moya, A.; González-Candelas, F.G.; Galán, J.-C.. "Evolutionary trajectories of beta-lactamase CTX-M-1 cluster enzymes: Predicting antibiotic resistance". PLoS Pathogens 6 1 (2010): http://www.scopus.com/inward/record.url?eid=2-s2.0-77649246045&partnerID=MN8TOARS.
    10.1371/journal.ppat.1000735
  58. Novais, Â.; Baquero, F.; Machado, E.; Cantón, R.; Peixe, L.; Coque, T.M.. "International spread and persistence of TEM-24 is caused by the confluence of highly penetrating Enterobacteriaceae clones and an IncA/C2plasmid containing Tn1696::Tn1 and IS5075-Tn21". Antimicrobial Agents and Chemotherapy 54 2 (2010): 825-834. http://www.scopus.com/inward/record.url?eid=2-s2.0-75749094339&partnerID=MN8TOARS.
    10.1128/AAC.00959-09
  59. Oteo, J.; Diestra, K.; Juan, C.; Bautista, V.; Novais, A.; Pérez-Vázquez, M.; Moyá, B.; et al. "Extended-spectrum ß-lactamase-producing Escherichia coli in Spain belong to a large variety of multilocus sequence typing types, including ST10 complex/A, ST23 complex/A and ST131/B2". International Journal of Antimicrobial Agents 34 2 (2009): 173-176. http://www.scopus.com/inward/record.url?eid=2-s2.0-67349086612&partnerID=MN8TOARS.
    10.1016/j.ijantimicag.2009.03.006
  60. Valverde, A.; Cantón, R.; Garcillán-Barcia, M.P.; Novais, Â.; Galán, J.C.; Alvarado, A.; De La Cruz, F.; Baquero, F.; Coque, T.M.. "Spread of blaCTX-M-14 is driven mainly by IncK plasmids disseminated among Escherichia coli phylogroups A, B1, and D in Spain". Antimicrobial Agents and Chemotherapy 53 12 (2009): 5204-5212. http://www.scopus.com/inward/record.url?eid=2-s2.0-71249128722&partnerID=MN8TOARS.
    10.1128/AAC.01706-08
  61. Coque, T.M.; Novais, Â.; Carattoli, A.; Poirel, L.; Pitout, J.; Peixe, L.; Baquero, F.; Cantón, R.; Nordmann, P.. "Dissemination of clonally related Escherichia coli strains expressing extended-spectrum ß-lactamase CTX-M-15". Emerging Infectious Diseases 14 2 (2008): 195-200. http://www.scopus.com/inward/record.url?eid=2-s2.0-38949157167&partnerID=MN8TOARS.
  62. Cantón, R.; Valverde, A.; Novais, Á.; Baquero, F.; Coque, T.. "Evolution and current situation of ESBL (Enfermedades Infecciosas y Microbiologia Clinica (2007) 25, SUPPL. 2, (2-10))". Enfermedades Infecciosas y Microbiologia Clinica 26 9 (2008): http://www.scopus.com/inward/record.url?eid=2-s2.0-56549112373&partnerID=MN8TOARS.
    10.1157/13128284
  63. Novais, Â.; Cantón, R.; Coque, T.M.; Moya, A.; Baquero, F.; Galán, J.C.. "Mutational events in cefotaximase extended-spectrum ß-lactamases of the CTX-M-1 cluster involved in ceftazidime resistance". Antimicrobial Agents and Chemotherapy 52 7 (2008): 2377-2382. http://www.scopus.com/inward/record.url?eid=2-s2.0-46249100954&partnerID=MN8TOARS.
    10.1128/AAC.01658-07
  64. Cantón, R.; Novais, A.; Valverde, A.; Machado, E.; Peixe, L.; Baquero, F.; Coque, T.M.. "Prevalence and spread of extended-spectrum ß-lactamase-producing Enterobacteriaceae in Europe". Clinical Microbiology and Infection 14 SUPPL. 1 (2008): 144-153. http://www.scopus.com/inward/record.url?eid=2-s2.0-37249052710&partnerID=MN8TOARS.
    10.1111/j.1469-0691.2007.01850.x
  65. Machado, E.; Coque, T.M.; Cantón, R.; Novais, Â.; Sousa, J.C.; Baquero, F.; Peixe, L.. "High diversity of extended-spectrum ß-lactamases among clinical isolates of Enterobacteriaceae from Portugal". Journal of Antimicrobial Chemotherapy 60 6 (2007): 1370-1374. http://www.scopus.com/inward/record.url?eid=2-s2.0-36448967473&partnerID=MN8TOARS.
    10.1093/jac/dkm381
  66. Novais, Â.; Cantón, R.; Moreira, R.; Peixe, L.; Baquero, F.; Coque, T.M.. "Emergence and dissemination of Enterobacteriaceae isolates producing CTX-M-1-like enzymes in spain are associated with IncFII (CTX-M-15) and broad-host-range (CTX-M-1, -3, and -32) plasmids". Antimicrobial Agents and Chemotherapy 51 2 (2007): 796-799. http://www.scopus.com/inward/record.url?eid=2-s2.0-33846662974&partnerID=MN8TOARS.
    10.1128/AAC.01070-06
  67. Machado, E.; Ferreira, J.; Novais, Â.; Peixe, L.; Cantón, R.; Baquero, F.; Coque, T.M.. "Preservation of integron types among Enterobacteriaceae producing extended-spectrum ß-lactamases in a spanish hospital over a 15-year period (1988 to 2003)". Antimicrobial Agents and Chemotherapy 51 6 (2007): 2201-2204. http://www.scopus.com/inward/record.url?eid=2-s2.0-34250186424&partnerID=MN8TOARS.
    10.1128/AAC.01389-06
  68. Morosini, M.-I.; García-Castillo, M.; Coque, T.M.; Valverde, A.; Novais, Â.; Loza, E.; Baquero, F.; Cantón, R.. "Antibiotic coresistance in extended-spectrum-ß-lactamase-producing Enterobacteriaceae and in vitro activity of tigecycline". Antimicrobial Agents and Chemotherapy 50 8 (2006): 2695-2699. http://www.scopus.com/inward/record.url?eid=2-s2.0-33746893471&partnerID=MN8TOARS.
    10.1128/AAC.00155-06
  69. Novais, Â.; Cantón, R.; Valverde, A.; Machado, E.; Galán, J.-C.; Peixe, L.; Carattoli, A.; Baquero, F.; Coque, T.M.. "Dissemination and persistence of blaCTX-M-9 are linked to class 1 integrons containing CR1 associated with defective transposon derivatives from Tn402 located in early antibiotic resistance plasmids of IncHI2, IncP1-a, and IncFI groups". Antimicrobial Agents and Chemotherapy 50 8 (2006): 2741-2750. http://www.scopus.com/inward/record.url?eid=2-s2.0-33746862191&partnerID=MN8TOARS.
    10.1128/AAC.00274-06
Manual
  1. Novais, Ângela. MANUAL DA ASSOCIAÇÃO PORTUGUESA DE FARMACÊUTICOS HOSPITALARES SOBRE ANTIMICROIANOS. Portugal: Associação Portuguesa de Farmacêuticos Hospitalares. 2023.
    Published
Online resource
  1. Novais, Ângela. Klebsiella pneumoniae subsp. pneumoniae strain M1A, whole genome shotgun sequencing project deposited at DDBJ/ENA/GenBank (Bioproject PRJNA415896, Genbank accession number PEHI00000000, Biosample SAMN07837294). 2018. https://www.ncbi.nlm.nih.gov/biosample/7837294.
  2. Novais, Ângela. 2. Klebsiella pneumoniae subsp. pneumoniae strain M11, whole genome shotgun sequencing project deposited at DDBJ/ENA/GenBank (Bioproject PRJNA415896, Genbank accession number PEHI00000000, Biosample SAMN08057520). 2018. https://www.ncbi.nlm.nih.gov/biosample/8057520.
  3. Novais, Ângela. Citrobacter portucalensis strain A60, whole genome shotgun sequencing project deposited at DDBJ/ENA/GenBank (Bioproject PRJNA369027, Genbank accession number NZ_MVFY00000000.1, Biosample SAMN06214708). 2017. https://www.ncbi.nlm.nih.gov/biosample/7196160.
  4. Novais, Ângela. Escherichia coli strain C1728 glycerol-3-phosphate transporter variant (glpT) gene (Genbank accession number KT832798.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/KT832798.1.
  5. Novais, Ângela. Escherichia coli strain C1728 fosfomycin transporter variant (uhpT) gene (Genbank accession number KT832797.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/KT832797.1.
  6. Novais, Ângela. Escherichia coli strain C1728 plasmid pC1728 (IncFII) insertion sequence IS26 transposase (tnpA) gene, partial cds; glutathione S-transferase (fosA3), hypothetical protein, putative CadC-like protein, and putative transcriptional regulator genes, complete cds; and insertion sequence IS26 transposase (tnpA) gene (Genbank accession number KT734860.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/KT734860.1.
  7. Novais, Ângela. Citrobacter europaeus strain A121 quinolone resistance protein B73 (qnrB73) gene (Genbank accession number KF443075.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/KF443075.1.
  8. Novais, Ângela. Klebsiella pneumoniae strain K92 class A beta-lactamase SHV-194 (blaSHV) gene, blaSHV-194 allele (Genbank accession number KX421191.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/KX421191.1.
  9. Novais, Ângela. Acinetobacter baumannii strain ST765 plasmid pABKp1-like transposon TnaphA6, partial sequence; and transposon Tn2008, complete sequence (Genbank accession number KP074966.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/752783732.
  10. Novais, Ângela. Klebsiella pneumoniae K43 blaVIM gene for subclass B1 metallo-beta-lactamase VIM-34, complete CDS (Genbank accession number NG_050361.1). 2016. https://www.ncbi.nlm.nih.gov/nuccore/NG_050361.1.
  11. Novais, Ângela. Klebsiella pneumoniae strain K43 class I integron (Genbank accession number JX185132.1). 2013. https://www.ncbi.nlm.nih.gov/nuccore/JX185132.1.
Preprint
  1. Mourão, Joana; Magalhães, Mafalda; Ribeiro-Almeida, Marisa; Rebelo, Andreia; Novais, Carla; Peixe, Luísa; Novais, Ângela; Antunes, Patrícia. "Decoding Klebsiella pneumoniae in Poultry Chain: Unveiling Genetic Landscape, Antibiotic Resistance, and Biocide Tolerance in Non-Clinical Reservoirs". 2024. http://dx.doi.org/10.1101/2024.01.23.576544.
    10.1101/2024.01.23.576544
Thesis / Dissertation
  1. Rodrigues, Carla Alexandra Parada. "Enterobacteriaceae resistant to extended-spectrum ß- lactam antibiotics in different settings in Portugal: towards an epidemiological characterization of a Public Health priority". Master, Universidade Fernando Pessoa, 2012. http://hdl.handle.net/10284/4819.
  2. Novais, Ângela. "Unidades de Captura y Dispersión Génica en la Evolución de las Beta-Lactamases de Espectro Extendido". PhD, Universidad Complutense de Madrid, 2008. http://eprints.ucm.es/.

Other

Invention
  1. Use of spectroscopic-based models for Klebsiella pneumoniae strain typing.. 2017. Novais, Ângela.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023/12/09 Emerging threat: resistance to ceftazidime-avibactam and other last-line antibiotics amongst carbapenem-resistant Klebsiella pneumoniae in Portugal Microbiotec2023
Sociedade Portuguesa Microbiologia (Covilhã, Portugal)
2023/11/15 Espectroscopia de infravermelho no suporte ao diagnóstico de surtos hospitalares - by INVITATION Enterobacterales produtoras de carbapenemases: Epidemiologia e Estratégias para a sua Gestão
SCIRA-Hospital Pedro Hispano (Portugal)
2023/07/12 Espectroscopia de infravermelho no suporte ao diagnóstico de surtos hospitalares - by INVITATION Enterobacterales produtoras de carbapenemases: Epidemiologia e Estratégias para a sua Gestão
SCIRA - Hospital Pedro Hispano (Portugal)
2023/07/10 Espectroscopia de infravermelho no suporte ao diagnóstico de surtos hospitalares Course Diagnóstico laboratorial rápido em Microbiologia Clínica
Faculdade de Medicina Universidade do Porto (Portugal)
2023/07/10 Espectroscopia de infravermelho no suporte ao diagnóstico de surtos hospitalares - by INVITATION post-graduation course Diagnóstico laboratorial rápido em Microbiologia Clínica
universidade do Porto - Faculdade de Medicina (Portugal)
2023/05/11 Fourier-Transform Infrared (FT-IR) spectroscopy as a tool to perform cheap and rapid bacterial typing in outbreak settings - by INVITATION Webinar
Statens Serum Institute (Denmark)
2023/02/22 Introduction to Research Data Management Webinar
UCIBIO (Portugal)
2022/12/19 FTIR spectroscopy to support surveillance and infection control of multidrug resistant bacteria iH4B Associated Lab kick-off meeting
iHHB (Portugal)
2022/04/28 CIM, Concentração letal e Interpretação de antibiogramas. Deteção de resistências, significado terapêutico e no controlo da infeção - By Invitation
Associação Portuguesa Farmacêuticos Hospitalares (Portugal)
2022/04/24 Turning ATR FT-IR spectroscopy into an user-friendly, quick and reproducible Klebsiella pneumoniae typing method 32th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID), Lisbon, Portugal
European Society of Clinical Microbiology and Infectious DIseases (Lisbon, Portugal)
2022/03/07 Fundamentals and applications of FT-IR spectroscopy in infection control - BY INVITATION ESGMD webinar
European Society for Clinical Microbiology and Infectious Diseases (Online, Portugal)
2021/11/23 IR Bactyping, the next cornerstone for Klebsiella pneumoniae strain typing towards real-time infection control National Congress Microbiology Microbiotec’21
Portuguese Society of Microbiology
2021/11/22 Ribeiro-Almeida M, Magalhães M, Paiva S, Rebelo A, Peixe L, Novais C, Novais Â, Antunes P. 2021. From farm to fork: studying the diversity and persistence of colistin resistant Klebsiella pneumoniae in colistin-free chicken farms. National Congress Microbiology Microbiotec’21. Portugal, 23-26 November 2021. Webconference National Congress Microbiology Microbiotec’21
Portuguese Society of Microbiology (Portugal)
2021/11/17 IR Bactyping A bacterial strain typing method to support epidemiology and infection control in real-time Public Presentation of the Winners of BIP Proof Prize in 2019
Universidade do Porto. UPorto Inovação (Portugal)
2021/05/07 Módulo I: Carreira na Investigação - BY INVITATION Investigação Científica: Na Vanguarda da Inovação em Saúde
Junior company Now Science (Portugal)
2019/12/06 A powerful and cost-effective strain typing tool: the ideal solution for real-time control of Klebsiella pneumoniae infections National Congress Microbiology Microbiotec’19
Sociedade Portuguesa Microbiologia (Coimbra, Portugal)
2019/10/25 Multirresistência na Comunidade - BY INVITATION 3rd International Congress IACS 2019 - Challenges and Innovation in Infection Control
Escola Superior de Saúde Norte da Cruz Vermelha Portuguesa (Santa Maria da Feira, Portugal)
2019/10/11 At the front line of Klebsiella pneumoniae capsular polysaccharides knowledge: FT-IR spectroscopy as a cost-effective strain typing tool - BY INVITATION 12th Workshop on FT-IR Spectroscopy in Microbiological and Medical Diagnostics
Robert Koch Institute (Berlin, Germany)
2019/10/01 Fourier Transform Infrared spectroscopy: unlocking fundamentals and prospects for bacterial strain typing - BY INVITATION 15th Congress of the French Microbiology Society (SFM) entitled Microbes.
French Society of Microbiology (SFM) (Paris, France)
2018/05 Escherichia coli resistente a fosfomicina causante de infecciones urinarias: elevada frecuencia de ST131 y detección del gen fosA3 XXII Congreso Nacional de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica
Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (Bilbao, Spain)
2018/04 Novais Â, Eremina Y, Ceia F, Pereira C, Alves C, Pissarra S, Tavares M, Ribeiro M, Peixe L. Outbreak of a multidrug resistant and phylogenetically distant ST17 Klebsiella pneumoniae producing CTX-M-15 among young children. 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
European Society of Clinical Microbiology and Infectious Diseases (Amsterdam, Germany)
2018/04 Ripoll A, Rodríguez-Domínguez M, Novais A, Coque T, Cantón R, Baquero F, Galán JC. Relative fitness of different plasmids carrying blaCTX-M-15 gene. 18th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical MIcrobiology and Infectious Diseases (Barcelona, Spain)
2017/12 Rodrigues C, Machado E, Novais Â, Peixe L. High resolution analysis of multidrug resistant Klebsiella pneumoniae: from key molecular drivers to clonal delineation. MICROBIOTEC’17
Sociedade Portuguesa de Microbiologia (Porto, Portugal)
2017/12 Ribeiro TG, Novais C, Novais Â, Antunes P, Peixe L. Assessment of FT-IR resolution to discriminate L. monocytogenes cells exposed to temperatures linked to food processing chain. MICROBIOTEC’17
Sociedade Portuguesa de Microbiologia (Porto, Portugal)
2017/04 Novais A, Moreira R, Coque TM, Cantón R, Baquero F, Galán JC. Ceftazidime resistance evolution in ESBLs belonging to CTX-M-1 cluster (CTX-M-1, CTX-M-3, CTX-M-10) in a hypermutator background. 17th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Munich, Germany)
2016/05 Bactérias vs Antibióticos: Quem ganha a batalha? An invitation to talk about antibiotic resistance with the community (GENERAL PUBLIC) Café da Ciência (towards the community)
Centro de Ciência Viva de Bragança (Bragança, Portugal)
2016/04 Novais Â, Rodrigues C, Sousa C, Mendes AC, Lopes JA, Coque TM, Peixe L. Subclonal typing of ST131 E. coli by Fourier-transform infrared spectroscopy reveals variable metabolic profiles within the predominant H30 subclone 26th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
European Society of Clinical Microbiology and Infectious Diseases (Amsterdam, Germany)
2016/03 Rodrigues C, Lanza VF, Sousa C, Machado E, Lopes JA, Baquero F, Novais Â, Peixe L, Coque TM. Multiomic Approach To Delineate Intraclonal Diversity Of CG14 And CG15 Klebsiella pneumoniae? 11th International Meeting on Microbial Epidemiological Markers (IMMEM XI)
European Society of Clinical Microbiology and Infectious Diseases (Estoril, Portugal)
2015/10/16 Going deep in the inter and intra-species differentiation of clinically relevant bacteria by MALDI-TOF MS and FTIR - BY INVITATION 10th Workshop on FT-IR Spectroscopy in Microbiological and Medical Diagnostics
Robert Koch Institute (Berlin, Germany)
2015/04 Novais A, Brilhante M, Peixe L. Evaluation of the recently launched rapid carb blue kit for detection of carbapenemase-producing Gram-negative bacteria 25th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Copenhagen, Denmark)
2015 Novais Â, Moniz T, Rebelo AR, Silva AMG, Rangel M, Peixe L. Identification of a novel iron chelator compound with promising antibacterial activity against Gram positive bacteria Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2015
Universidade do Porto (Porto, Portugal)
2015 Novais Â, Brilhante M, Peixe L. Evaluation of the recently launched rapid carb blue kit for detection of carbapenemase-producing Gram-negative bacteria. Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2015
Universidade do Porto (Porto, Portugal)
2015 Novais Â, Moniz T, Rebelo AR, Silva AMG, Rangel M, Peixe L. Identification of a novel iron chelator compound with promising antibacterial activity against Gram positive bacteria. Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2015
University of Porto (Porto, Portugal)
2014/09/19 Enterobacteriaceae resistentes aos carbapenemos: epidemiologia, carbapenemases associadas e implicações na sua deteção - BY INVITATION Workshop Carbapenemases em Bacilos de Gram Negativo: Deteção e implicações clínicas
Faculdade Farmácia Universidade Porto (Porto, Portugal)
2013/05 Diseminación mundial de clones de alto riesgo y elementos de multirresistencia: hacia la globalización y la panresistencia - BY INVITATION XVII Congreso de la Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica
Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (SEIMC) (Zaragoza, Spain)
2012 E. coli multiresistentes: do hospital para a comunidade - BY INVITATION I Jornadas de Saúde Pública e Farmacoterapia
Faculdade Farmácia Universidade do Porto (Portugal)
2012 Montenegro C, Peixe L, Novais Â. Biofilm-production ability of widespread Escherichia coli clones. Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2012
Universidade do Porto (Porto, Portugal)
2012 Pires J, Novais Â, Peixe L. Diversity and virulence profiles of Escherichia coli ST69, ST393 and ST405 clones. Congresso Nacional de Jovens Investigadores da Universidade do Porto, IJUP2012
Universidade do Porto (Porto, Portugal)
2011 Disseminação Global de Genes de Resistência Antimicrobiana - BY INVITATION World Health Day
Instituto Politécnico de Coimbra - Escola Superior de Tecnologia da Saúde de Coimbra (Portugal)
2011 Resistência em Enterobacteriaceae: um problema à escala mundial - BY INVITATION Seminar in Clinical Microbiology
University Fernando Pessoa - Faculdade de Ciências da Saúde (Portugal)
2010 Antibioterapia, uma abordagem complementar - “Enterobacteriaceae: a escalada da resistência - BY INVITATION V Scientific Congress
Student Association of Pharmacy Faculty, University of Porto (Portugal)
2010 Antibiotic Resistance patterns in ICU pathogens and determination methods - BY INVITATION 70th FIP World Congress of Pharmacy and Pharmaceutical Sciences
International Pharmaceutical Federation (Lisbon, Portugal)
2010 Globalização da Resistência: O exemplo de ESBLs e E. coli uropatogénicos - BY INVITATION Course: Clones, genes e elementos genéticos móveis: peças do puzzle da resistência a antibióticos
Pharmacy Faculty, University of Porto (Porto, Portugal)
2009 Clonal diversity in CTX-M producing bacteria - BY INVITATION International Symposium "The CTX-M beta-lactamase pandemics: a complex health threat in antibiotic resistance "
Fundación Ramón Areces (Madrid, Spain)
2008/05 Novais A, Cantón R, Valverde A, Baquero F, Coque TM. La diseminación y persistencia de TEM-4 en España se asocia a clones persistentes de E. coli y K. pneumoniae y plásmidos epidémicos de la familia repFIIA. XIII Congreso de la Sociedad Española de de Enfermedades Infeccionas y Microbiología Clínica
Sociedad Española de de Enfermedades Infeccionas y Microbiología Clínica (Madrid, Spain)
2008/04 Novais A, Comas I, Cantón R, Coque TM, Baquero F, Moya A, Galán JC. Evolutionary trajectories among extended beta-lactamase enzymes belonging to the CTX-M-1 cluster 18th European Congress of Clinical Microbiology and Infectious Diseases
European Society of Clinical Microbiology and Infectious Diseases (Barcelona, Spain)
2006/09 Coque TM, Novais A, Carattoli A, Poirel L, Cantón R, Baquero F, Nordmann P. International Dissemination of Extended Spectrum Beta-Lactamase CTX-M-15-Producing Escherichia coli (EC) is Mainly Caused by IncFII Plasmids Frequently Harboring blaOXA30 and Plasmid Mediated Fluoroquinolone Resistance Gene aac(6´)- Ib-cr. 46th Interscience Conference on Antimicrobial Agents and Chemotherapy
American Society of Microbiology (San Francisco, United States)
2006/05 Novais A, Cantón R, Valverde A, Galán JC, Machado E, Peixe L, Carattoli A, Baquero F, Coque TM. Identificación de blaCTX-M-9 en diferentes variantes de Tn402 y Tn21 asociadas a Plásmidos de Incompatibilidad Clásicos (IncH12, IncP-1a). XII Congreso Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (SEIMC)
Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (Valencia, Spain)
2006/05 Valverde A, Cantón R, Novais A, Baquero F, Coque TM. Dispersión nosocomial alodémica de Klebsiella pneumoniae productora de SHV-12 asociada a diferentes plásmidos. XII Congreso Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (SEIMC)
Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica (Valencia, Spain)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2024/01/01 - Current Clinical microbiology applications of FT-IR spectroscopy
Supervisor
Universidade do Porto Faculdade de Farmácia, Portugal
2020/12/01 - Current Fourier-Transform infrared spectroscopy: extending the knowledge and applications to support clinical microbiology diagnosis
Supervisor
 Doutoramento em Microbiologia (PhD)
REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
2020/11/01 - Current Exploring Klebsiella pneumoniae surface polysaccharides signatures and host-pathogen recognition patterns: towards understanding human and environmental persistence
Supervisor
 Doutoramento em Microbiologia (PhD)
REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
2020/02 - Current Detection and differentiation of multi drug resistant Klebsiella pneumoniae to support infection control
Supervisor
 Integrated Master on Pharmaceutical Sciences (Scientific initiation)
Universidade do Porto Faculdade de Farmácia, Portugal
2012/09 - Current Epidemiology of Escherichia coli isolates resistant to extended-spectrum cephalosporins
Co-supervisor
Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2021/09/24 - 2021/12/24 Análise de dados de sequenciamento de genoma completo de isolados de Escherichia coli carreando o gene mcr-1 obtidos de amostras ambientais
Co-supervisor
Universidade de São Paulo, Brazil
2017/06 - 2019/07 Ocorrência e diversidade de Escherichia coli e Klebsiella pneumoniae patogénicas e/ou resistentes a antibióticos na microbiota de pessoas saudáveis
Co-supervisor
 Master in Pharmaceutical Sciences - Project I signature (4th degree) (Degree)
Universidade do Porto Faculdade de Farmácia, Portugal
2018/02 - 2018/11/14 Carbapenemase-producing Enterobacteriaceae: from colonization to infection
Co-supervisor
 Scientific Master in Clinical Analysis, Faculty of Pharmacy University of Porto. Porto, Portugal. (Master)
Universidade do Porto Faculdade de Farmácia, Portugal
2013 - 2017/07 In depth characterization of contemporary Escherichia coli and Klebsiella pneumoniae resistant to extended-spectrum ß-lactams: from key molecular drivers to clonal delineation
Supervisor
Universidade do Porto Faculdade de Farmácia, Portugal
2012 - 2016/12 Extending the knowledge on drivers of intrinsic and acquired resistance to cephalosporins and quinolones in Enterobacteriaceae
Co-supervisor
Universidade do Porto Faculdade de Farmácia, Portugal
2015/03 - 2016/09 Antimicrobial susceptibility of urinary tract pathogens of residentes in a long-and médium-term healthcare facility in north of Portugal
Co-supervisor
 Scientific Master in Clinical Analysis, Faculty of Pharmacy University of Porto. Porto, Portugal. (Master)
Universidade do Porto Faculdade de Farmácia, Portugal
2014/02 - 2016/07 Epidemiologia de Escherichia coli produtores de extended-spectrum beta-lactamases (ESBL) em pacientes colonizados
Supervisor
 Integrated Master on Pharmaceutical Sciences (Degree)
Universidade do Porto Faculdade de Farmácia, Portugal
2016/03/01 - 2016/05/29 Study of antibiotic resistance and virulence on intestinal Enterobacteriaceae from colon cancer patients Institution of Origin: Faculty of Biology, University of Bucharest, Department of Microbiology, Romania. supervision during stay in Portugal.
Co-supervisor
Universidade do Porto Faculdade de Farmácia, Portugal
2015/10 - 2016/05 Characterisation of multidrug resistant Klebsiella pneumoniae and Enterococcus faecium isolates by spectroscopic and genotypic methods
Co-supervisor
Univerzita Karlova Farmaceutická Fakulta v Hradci Králové, Czech Republic
2014/09 - 2015/10 Evaluation of antibacterial activity of iron chelator agens in clinically relevant bacteria
Co-supervisor
 Master in Pharmaceutical Sciences (Project I signature 4th degree) (Degree)
Universidade do Porto Faculdade de Farmácia, Portugal
2014/09/01 - 2015/06/15 Evaluation of the recently launched Rapid CARB Blue kit for detection of carbapenemase-producing Gram negative bacteria
Supervisor
2013/09 - 2013/12 Phenotypic and molecular analysis of beta-lactam resistance markers in opportunistic, non-fermenting Gram negative rods Institution of Origin: Faculty of Biology, University of Bucharest, Department of Microbiology, Romania. Cosupervision during stay in Portugal.
Co-supervisor
Universidade do Porto Faculdade de Farmácia, Portugal
2013/09 - 2013/12 Genetic support of antibiotic resistance in clinically relevant Gram negative enteric bacili Institution of Origin: Faculty of Biology, University of Bucharest, Department of Microbiology, Romania. Co-supervision during stay in Portugal.
Co-supervisor
Universidade do Porto Faculdade de Farmácia, Portugal
2012/09 - 2013/10 Evaluation of adhesion and biofilm producing ability of pandemic Escherichia coli clonal complexes
Co-supervisor
 Master in Pharmaceutical Sciences (Project I - 4th Degree signature) (Degree)
Universidade do Porto Faculdade de Farmácia, Portugal
2011/09/01 - 2012/06/30 Clonality and virulence of uropathogenic Escherichia coli
Supervisor
2011 - 2012 Enterobacteriaceae resistant to broad spectrum beta-lactam antibiotics of different origins in Portugal: an epidemiological characterization of a public health priority
Supervisor
 Scientific Master in Clinical Microbiology, University Fernando Pessoa (Master)
Universidade Fernando Pessoa, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2023/02/02 - 2024/02/08 ESCMID Postgraduate Education Course "Principles and applications of FT-IR spectroscopy in Clinical Microbiology" (2024/02/07 - 2024/02/08)
Other (Co-organisor)
 European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2019/07/19 - 2019/07/19 I Workshop MicroMundo@UPorto (https://sigarra.up.pt/ffup/pt/noticias_geral.ver_noticia?p_nr=26337) (2019/07/19 - 2019/07/19)
Conference (Member of the Organising Committee)
 Universidade do Porto Faculdade de Farmácia, Portugal
2018/11 - 2018/11 Sessão de abertura do projeto MicroMundo@U.Porto 2018/2019 (2018/11 - 2018/11)
Other (Member of the Organising Committee)
 Universidade do Porto Faculdade de Farmácia, Portugal
2015/11 - 2016/03 XI International Meeting on Microbial Epidemiological Markers (IMMEM) (https://www.escmid.org/research_projects/escmid_conferences/immem_xi/) (2016/03/09 - 2016/03/12)
Congress (Member of the Organising Committee)
 European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2014/09/19 - 2014/09/19 Workshop Carbapenemases em Bacilos de Gram Negativo: Deteção e implicações clínicas A workshop direct to university graduated students and professionals on the topic. (https://sigarra.up.pt/ffup/en/NOTICIAS_GERAL.VER_NOTICIA?p_nr=8575) (2014/09/19 - 2014/09/19)
Workshop (Co-organisor)
 Universidade do Porto Faculdade de Farmácia, Portugal

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2022/12/19 - Current Participation in the Round Table on Career Development at the iH4B Associated Lab kick-off meeting
Meeting
Associate Laboratory Institute for Health and Bioeconomy, Portugal
2021/11/15 - Current Coordinator of the participation of UCIBIO unit in the Portuguese Infrastructure for Biological Data - BioData.pt (www.biodata.pt). Member of the working group on Interoperability.
Other
BioData.pt, Portugal
2018/09/27 - Current UCIBIO anual meeting
Meeting
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
2023/09/19 - 2023/09/20 Workshop in Communication - Public Speaking
Workshop
Unidade de Ciências Biomoleculares Aplicadas, Portugal
2022/02/21 - 2022/10/01 Participation in the Ready for BioData Management?: Data Stewardship for Life Sciences Training Program
Other
BioData.pt, Portugal
2022/06/30 - 2022/06/30 Pré-ECCMID Day on Antimicrobial Resistance
Seminar
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2019/11/15 - 2019/11/15 Day of the Microbiology Laboratory
Conference
Universidade do Porto Faculdade de Farmácia, Portugal
2019/10/24 - 2019/10/24 3º Congresso Internacional IACS 2019: Challenges and Innovation in Infection Control
Congress
2019/09/03 - 2019/09/05 Participation in GLUPOR 13 - a meeting on the area of glycosciences, for establishment of collaborations among the carbohydrate national community.
Meeting
 13th International Meeting of the Portuguese Carbohydrate Group – GLUPOR 13
Universidade do Porto Instituto de Investigação e Inovação em Saúde, Portugal
2019/07/02 - 2019/07/02 HiTech 2019 Closing session - Presentation of final pitch of IR Bactyping business idea with a roundtable discussion (https://www.youtube.com/watch?v=Oi9HJQRIBJA)
Other
 HiTech 2019 Closing Session
HiSeedTech, Portugal
2019/04/13 - 2019/04/16 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
Congress
 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2018/04/21 - 2018/04/24 28th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
Congress
 28th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2018/03/07 - 2018/03/07 Revelando os segredos da microbiota urinária: impacto nas doenças do trato urinário - VI Ciclo de Conferências de Divulgação Científica FFUP/ICBAS
Conference
Universidade do Porto Faculdade de Farmácia, Portugal
2017/12/07 - 2017/12/09 Congress of Microbiology and Biothecnology, MicroBiotec17
Congress
Universidade Católica Portuguesa Escola Superior de Biotecnologia, Portugal
2017/10/19 - 2017/10/20 11th Workshop FT-IR Spectroscopy in Microbiological and Medical Diagnostics
Workshop
Robert Koch Institut, Germany
2017/07/21 - 2017/07/21 Participation in the advisory board meeting of UCIBIO, in representation of post-doctoral researchers from the research unit and the research group. It involved presentation of poster and discussion with advisory board members. UCIBIO Advisory Board Meeting
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
2017/07/12 - 2017/07/12 Workshop on Innovation and Intelectual Property
Workshop
 Workshop on Innovation and Intelectual Property
Universidade do Porto Faculdade de Ciências, Portugal
2017/05/29 - 2017/05/29 Workshop “Writing your way into the right job” by Sarah Blackford
Workshop
 Workshop “Writing your way into the right job”.
Instituto Politécnico do Porto Instituto Superior de Engenharia do Porto, Portugal
2016/07/19 - 2016/07/19 1.o Encontro Anual do Departamento de Ciências Biológicas da Faculdade de Farmácia da Universidade do Porto
Meeting
Universidade do Porto Faculdade de Farmácia, Portugal
2016/05/25 - 2016/05/25 Development of na immunotherapy against infection by multiresistant bactéria
Seminar
Universidade do Porto Faculdade de Farmácia, Portugal

Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
2016/04/09 - 2016/04/12 26th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID)
Congress
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2016/03/09 - 2016/03/11 XI IMMEM. 11th International Meeting on Microbial Epidemiological Markers
Congress
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2016/02/04 - 2016/02/05 REQUIMTE Meeting (Meeting of researchers from the research unit)
Meeting
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
2015/12/10 - 2015/12/12 Congress of Microbiology and Biothecnology, MicroBiotec15
Congress
2015/10 - 2015/10 10th Workshop on FT-IR Spectroscopy in Microbiological and Medical Diagnostics
Workshop
Robert Koch Institut, Germany
2015/05 - 2015/05 International Symposium. Microbiology: Transmission
Symposium
Fundación Ramon Areces, Spain
2015/04 - 2015/04 25th European Congress of Clinical Microbiology and Infectious Diseases
Congress
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2015/03/12 - 2015/03/15 Event dedicated to demonstrate the the educative and research activities of University of Porto that involves the interaction between professors, researchers and university students in order to contribute for their career direction.
Exhibition
 13ª Mostra da Universidade do Porto (Mostra UP)
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
2015/03/12 - 2015/03/15 Participation in the 13ª Mostra da Universidade do Porto
Exhibition
Universidade do Porto, Portugal
2015/02 - 2015/02 Formação em LC-MS/MS, modelos Acquity UPLC e Quattro Premier XE
Seminar
Universidade do Porto Faculdade de Farmácia, Portugal
2014/05 - 2014/05 24th European Congress of Clinical Microbiology and Infectious Diseases
Congress
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2014/03/27 - 2014/03/30 Event dedicated to demonstrate the the educative and research activities of University of Porto that involves the interaction between professors, researchers and university students in order to contribute for their career direction.
Exhibition
 12ª Mostra da Universidade do Porto (Mostra UP)
Rede de Química e Tecnologia Laboratório Associado para a Química Verde, Portugal
2014/03/27 - 2014/03/29 Participation in the 12ª Mostra da Universidade do Porto (Mostra UP)
Exhibition
Universidade do Porto, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2023/06/08 Main Arguer of the PhD Thesis entitled “Interconnection between metabolism and fosfomycin resistance in Stenotrophomonas maltophilia”.
(Thesis) Main arguer
 Teresa Gil-Gil (PhD)
Universidad Autónoma de Madrid, Spain
2023/01/29 Main Arguer of the PhD Thesis entitled “Wild mammals in Portugal: gut microbiota as a source of pathogenic bacteria and antibacterial resistance”.
(Thesis) Main arguer
 Diana Patrícia Pires Dias (PhD)
Universidade de Aveiro, Portugal
2022/09/22 Member of Jury of the Reunião-Entrevisto of the PhD Thesis entitled “Rapid detection of Enzymatic Mechanisms of Resistance in Enterobacterales by Flow Cytometry”. Student: Inês Alexandra Martins Oliveira. Supervirors: Dr. Cidália Pina-Vaz, Dr. Ana Silva Dias. Faculty of Medicine University of Porto. 22nd September 2022.
(Thesis) Arguer
 Inês Alexandra Martins Oliveira. (PhD)
Universidade do Porto Faculdade de Medicina, Portugal
2022/05/16 Main Arguer of the PhD Thesis entitled “Enterobacteriaceae as mediators for carbapenem resistance transfer between environmental and human settings”.
(Thesis) Main arguer
 Pedro Filipe de Sá Teixeira (PhD)
Universidade de Aveiro, Portugal
2021/06/20 Attenuated total reflectance–Fourier transform infrared spectral profiling of bacteria and yeasts for routine microbial diagnostics
(Thesis) Arguer
 Lisa Lam (PhD)
2021/02/19 Examiner of the monography entitled “Evaluation of ultraviolet radiation on multidrug- resistant Acinetobacter baumannii widely disseminated clones” on the subject “Projecto I” from Pharmaceutical Sciences course at Faculty of Pharmacy University of Porto.
(Thesis) Main arguer
 Ana Catarina Ferreira Duarte (Other)
Universidade do Porto Faculdade de Farmácia, Portugal
2018/12/19 Carbapenemase producers of Pseudomonas aeruginosa: lights on new mobile genetic elements
(Thesis) Arguer
 João Francisco Tomaz Santos Botelho. (PhD)
Universidade do Porto Faculdade de Farmácia, Portugal
2011/11/25 Epidemiologia de ß-Lactamases Adquiridas do tipo AmpC em Isolados Clínicos Humanos de Enterobacteriaceae
(Thesis) Main arguer
 Francisco José Oliveira Freitas (Master)
Universidade Fernando Pessoa, Portugal

Committee member

Activity description
Role 		Institution / Organization
2018/11/15 - Current Member of the organizing committee of MicroMundo@UPorto, partner of the lerning-service Tiny Earth initiative (https://tinyearth.wisc.edu/about-us/our-network/). This project envisages to seek new antibacterial substances and create a new consciensciousness of the antibiotic resistance problem to the society by involving different educational levels (researchers, university and high-school students) (https://www.facebook.com/groups/MicroMundoUP/).
Member
 Universidade do Porto, Portugal
2014/05 - Current Member of the ESCMID Study Group for Epidemiological Markers - ESGEM
Member
 European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2023/04/22 - 2025/04/29 2023-2025. Member elected of the executive committee of the Study Group of Epidemiological Markers (ESGEM) from the European Society of Clinical Microbiology and Infectious Diseases (ESCMID). Role: Secretary. https://www.escmid.org/research_projects/study_groups/study_groups_a_f/epidemiological_markers/executive_committee/
Member
 European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2021/04/04 - 2023/03/31 2021-2023. Member elected of the executive committee of the Study Group of Epidemiological Markers (ESGEM) from the European Society of Clinical Microbiology and Infectious Diseases (ESCMID). Role: Education Officer. Organization of monthly webinars open to the scientific community. https://www.escmid.org/research_projects/study_groups/study_groups_a_f/epidemiological_markers/executive_committee/
Member
 European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2020/07/01 - 2020/10/30 Summer School 2020 "Interdisciplinary approaches to control infectious diseases and cancer" - Member of the Scientific Committee
Other
 Universidade do Porto Faculdade de Farmácia, Portugal

Conference scientific committee

Conference name Conference host
2023/07/01 - 2023/12/09 Microbiotec23. Congress of Microbiology and Biotechnology 2023 Sociedade Portuguesa de Microbiologia
2022/06/01 - 2022/11/25 MicroSummit 2022 Sociedade Portuguesa Microbiologia
2022/09/14 - 2022/09/17 13th International Meeting on Epidemiological Markers - Chairperson ESGEM study group from ESCMID
2021/09/01 - 2022/09/17 13th International Meeting on Epidemiological Markers European Society of Clinical Microbiology and Infectious Diseases (ESCMID)
2022/04/23 - 2022/04/26 32st European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) - Chairperson European Society of Clinical Microbiology and Infectious Diseases
2021/06/01 - 2021/11/26 Microbiotec21. Congress of Microbiology and Biotechnology 2021 Portuguese Microbiology Society
2021/04/21 - 2021/04/24 31st European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) - Chairperson European Society of Clinical MIcrobiology and Infectious Diseases
2018/04/21 - 2018/04/24 28th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) - chairperson of 1 scientific session Madrid, Spain

Consulting

Activity description Institution / Organization
2018/01 - Current Responsible for OUTSOURCING SERVICES (bacterial identification, bacterial typing, identification of mechanisms of resistance). It involves preparation of protocols and reports, and execution and/or supervision of tasks associated with laboratory services to private companies and public hospitals. REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
2013/01 - Current HEALTHCARE PROFESSIONALS SUPPORT. Technical and scientific support related to the identification of outbreaks, mechanisms of resistance and molecular epidemiological data in different hospitals or healthcare institutions. It involves also the transfer of know-how on the epidemiology of main multidrug resistant Gram negative bacteria, and methods for their laboratorial detection. REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
2022/08/01 - 2023/03/29 Participation as consultant and national expert on antimicrobial resistance for the Health and Digital Executive Agency (HaDEA) through mandate from the European Commission. It resulted in a publication (doi: 10.2925/826400) that informs the EU and national stakeholders on the barriers to effective development and implementation of national policies on infection prevention and control and prudent use of antimicrobials under the One Health national action plans.

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2022/04/28 - Current Course APFH 2022 | ANTIMICROBIANOS - “CIM, Concentração letal e Interpretação de antibiogramas. Deteção de resistências, significado terapêutico e no controlo da infeção” (Especialização pós-licenciatura) Associação Portuguesa de Farmacêuticos Hospitalares, Portugal
2017/04 - Current Theoretical class of the Master on Clinical Analysis 2018/2019. Faculty of Pharmacy of University of Porto. Porto, Portugal. Topics: Neisseria sp. (Mestrado) Universidade do Porto Faculdade de Farmácia, Portugal
2017/04 - Current Theoretical class of the Master on Clinical Analysis 2016/2017. Topic: Neisseria sp. (Mestrado) Universidade do Porto Faculdade de Farmácia, Portugal
2015/03 - Current Theoretical class of the Bacteriology subject of the 3.º year of Master in Pharmaceutical Sciences. Topics: Enterobacteriaceae and Escherichia coli. (Mestrado) Universidade do Porto Faculdade de Farmácia, Portugal
2024/05/20 - 2024/06/25 Unidade de Formação Contínua “Resistência bacteriana a antimicrobianos: origens, deteção laboratorial e implicações na antibioterapia”. Programa Impulsos (financiado pelo PRR). (Especialização pós-licenciatura) Universidade do Porto Faculdade de Farmácia, Portugal
2024/01/22 - 2024/04/15 Unidade de Formação Contínua “Exploração de genomas microbianos: do controlo da infeção à pesquisa de novas moléculas/enzimas”. Programa Impulsos (financiado pelo PRR). (Especialização pós-licenciatura) Universidade do Porto Faculdade de Farmácia, Portugal
2021/09/01 - 2022/02/28 Invited assistant professor at IUCS@CESPU (Gandra) in the area of Biochemistry. Practical Laboratorial classes (24h) at the Post-Graduation in Biomedical and Health Sciences. Biochemistry (Pós-Graduação) Instituto Universitário de Ciências da Saúde, Portugal
2021/09/01 - 2022/02/28 Invited assistant professor at IUCS@CESPU (Gandra) in the area of Biochemistry. Teoretical classes classes (20h) at the Integrated Master in Veterinary Medicine. Biochemistry (Mestrado integrado) Instituto Universitário de Ciências da Saúde, Portugal
2021/09/01 - 2022/02/28 Invited assistant professor at IUCS@CESPU (Gandra) in the area of Biochemistry. Practical-Teoretical classes (9h) at the Integrated Master in Veterinary Medicine. Biochemistry (Mestrado integrado) Instituto Universitário de Ciências da Saúde, Portugal
2021/03/01 - 2021/06/10 Invited assistant professor at IUCS@CESPU (Gandra) in the area of Microbiology. Practical Laboratorial classes (20h). Biomedical Sciences (Licenciatura) Cooperativa de Ensino Superior Politécnico e Universitário, Portugal

Instituto Universitário de Ciências da Saúde, Portugal
2020/09/01 - 2021/02/28 Invited assistant professor at IUCS@CESPU (Gandra) in the area of Biochemistry. Theoretical classes (22h) at Veterinary Sciencies course. Veterinary Sciences (Licenciatura) Cooperativa de Ensino Superior Politécnico e Universitário, Portugal

Instituto Universitário de Ciências da Saúde, Portugal
2020/09/01 - 2021/02/28 Invited assistant professor at IUCS@CESPU (Gandra) in the area of Biochemistry. Practical Laboratorial classes (32h). Forensic Sciences (Licenciatura) Cooperativa de Ensino Superior Politécnico e Universitário, Portugal

Instituto Universitário de Ciências da Saúde, Portugal
2020/09/17 - 2020/09/17 Module I of the Summer School 2020 course: Microbiology: Novel technologies Summer School 2020 course entitled "Interdisciplinary approaches to control infectious diseases and cancer" (Curso de Especialização Tecnológica) Universidade do Porto Faculdade de Farmácia, Portugal
2019/03/22 - 2019/03/22 Bacterial Typing methodologies (whole genome sequencing, fourier transform infrared spectroscopy) - in Master on Clinical Analysis (Mestrado) Universidade do Porto Faculdade de Farmácia, Portugal

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2019/08/27 Interview regarding the concept, target and advantages of IR Bactyping and the business case built during HiTech program. Exame Informática

Interview (tv / radio show)

Program Topic
2019/09/09 - 2019/09/09 Exame Informática IR Bactyping: A strategy to differentiate bacteria in hospitals

Journal scientific committee

Journal title (ISSN) Publisher
2020/07/01 - Current Antibiotics MDPI publishing
2007/10 - Current Activity as reviewer for n=20 specialty journals, including Journal of Clinical Microbiology, Frontiers in Microbiology, Clinical Microbiology and Infection, amongst others Springer, ASM, Elsevier, amongst others (Quartile 1 specialty journals)

Legal proceeding

Activity description Case
2021/10/01 - 2025/12/31 Communication Embassator of UCIBIO. Co-responsible for the communication of the BacT_Drugs group in Twitter since 2021.
2021/01/01 - 2021/01/20 Member of the juri of the research grant awarded in the framework of project “HEALTH-UNORTE: Setting-up biobanks and regenerative medicine strategies to boost research in cardiovascular, musculoskeletal, neurological, oncological, immunological and infectious diseases (refª NORTE-01-0145-FEDER-000039)

Mentoring / Tutoring

Topic Student name
2021/09/01 - 2022/02/10 Occurrence and diversity of invasive multidrug resistant Klebsiella pneumoniae Tatiana Ribeiro
2021/09/24 - 2021/12/24 Análise de dados de sequenciamento de genoma completo de isolados de Escherichia coli carreando o gene mcr-1 obtidos de amostras ambientais João Pedro Rueda Furlan
2020/02/10 - 2020/03/26 MicroMundo@Uporto 2019/2020 course Catarina Mota, Daniela Fernandes, Inês dos Santos, Joana Almeida, Joaquin Marrero, Luísa de Sá
2019/02/01 - 2019/03/22 MicroMundo@UPorto 2018/2019 course Ana Paiva, Ana Veríssimo, Ana Marques, Catarina Dionísio, António Santos

Other jury / evaluation

Activity description Institution / Organization
2022/07/05 - Current External Examiner of the PhD thesis entitled “Understanding evolution to tackle antibiotic resistance in Pseudomonas aeruginosa”. Supervisor: Dr. José Luis Martínez. Universidad Autónoma de Madrid, Spain
2022/04/01 - 2022/05/29 Reviewer for the Research Council of Norway. Projects under the call Antimicrobial Resistance under a One Health Perspective.
2020/12/01 - 2020/12/10 Reviewer of research projects of the 2020 call of the French National Research Agency (ANR) to support projects on Antibiotic Resistance Agence nationale de la recherche, France
2019/04 - 2019/05 Reviewer for the “Research Projects” call from the Croatian Science Foundation (HRZZ), a national funding agency devoted largely to promotion and funding research in Croatia. May 2018.
Distinctions

Award

2023 Attendance Grant
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2023 Travel Grant
European Society of Clinical Microbiology and Infectious Diseases, Switzerland
2022 Best Oral Communication
Universidade do Porto Faculdade de Farmácia, Portugal
2022 Jovem Investigador da Sociedade Portuguesa de Microbiologia” para a melhor apresentação oral
Sociedade Portuguesa de Microbiologia, Portugal
2022 Best Oral Communication in IJUP 2022 (Encontro Investigação Jovem da Universidade do Porto:
Universidade do Porto, Portugal
2019 Business Ignition Programme (BIP) Proof Funding
Fundação Amadeu Dias, Portugal
2017 Isabel Spencer Martins 2017

Other distinction

2010 The paper published in Antimicrobial Agents and Chemotherapy Journal in 2010 has been selected for the Journal Highlights section of Microbe (formerly ASM news) to appear in the March 2010 issue.
2009 Travel grant awarded by the interest of the papers presented at the "19th European Congress of Clinical Microbiology and Infectious Diseases
2009 PhD Prize “Premio Abilio Rodriguez Paredes” (PhD thesis considered one of the best in the year 2007/2008)
Universidad Complutense de Madrid, Spain
2008 Travel grant awarded by the interest of the papers presented at the "18th European Congress of Clinical Microbiology and Infectious Diseases
2007 Travel grant awarded by the interest of the papers presented at the "17th European Congress of Clinical Microbiology and Infectious Diseases
2005 Travel grant awarded by the interest of the papers presented at the "15th European Congress of Clinical Microbiology and Infectious Diseases