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Ana Rita Almeida de Oliveira completed her degree in Biologia Molecular e Genética in 2009 at Universidade de Lisboa Faculdade de Ciências and her Master's in Biologia Evolutiva e do Desenvolvimento in 2011 at the Universidade de Lisboa Faculdade de Ciências. Her PhD thesis is entitled "The role of cell-cell bacterial communication in the recovery from gut dysbiosis" and was done under the supervision of Dr. Karina Xavier at Instituto Gulbenkian de Ciência. In June 2021, Rita Oliveira started a postdoc at The University of Chicago, United States, in the lab of Eric Pamer to study new strategies in designing symbiotic bacterial strain consortia to enhance resistance against Klebsiella pneumoniae gut colonization, while she continues to actively collaborated with the laboratory of Karina Xavier in the projects related to Colonization Resistance against Enterobacteriaceae pathogens and quorum sensing manipulation in the gut microbiota. Rita Oliveira works in the area of Natural sciences with emphasis on Biological Sciences, Microbiology, and Host-microbe interactions. Rita Oliveira has developed her mentorship skills by co-supervising and training two Master's students in the last three years. She published 6 articles in international peer-reviewed journals. Has received 6 awards and/or honors. Rita Oliveira is heavily involved in science outreach activities having in the last year been interviewed twice by national TV/Radio media outlets. In her curriculum Ciência Vitae the most frequent terms in the context of scientific and technological are: Quorum Sensing, Gut Microbiota, Mouse models, Colonization Resistance, Biotherapy, Metagenomics, and Mathematical modeling.
Identification

Personal identification

Full name
Ana Rita Almeida de Oliveira

Citation names

  • A. Oliveira, Rita

Author identifiers

Ciência ID
A11F-2A2F-8FD5
ORCID iD
0000-0001-7334-5972

Email addresses

  • aaoliveira@igc.gulbenkian.pt (Professional)
  • aaoliveira@uchicago.edu (Professional)

Knowledge fields

  • Natural sciences - Biological Sciences - Microbiology
  • Natural sciences - Biological Sciences - Biology

Languages

Language Speaking Reading Writing Listening Peer-review
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Portuguese Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Education
Degree Classification
2015/01/01 - 2020/01/13
Concluded
Integrative Biology and Biomedicine (Doutoramento)
Instituto Gulbenkian de Ciência, Portugal
"Interspecies interactions in recovery of gut microbiota functions" (THESIS/DISSERTATION)
PhD awarded by Unanimous Consideration
2011
Concluded
Biologia Evolutiva e do Desenvolvimento (Mestrado)
Universidade de Lisboa Faculdade de Ciências, Portugal
"“Osteogenic differentiation of Human Umbilical Cord-derived Stromal Cells on Human Amniotic Membrane”" (THESIS/DISSERTATION)
17 (out of 20)
2009
Concluded
Biologia Molecular e Genética (Licenciatura)
Universidade de Lisboa Faculdade de Ciências, Portugal
"n/a" (THESIS/DISSERTATION)
14 (out of 20)
Affiliation

Science

Category
Host institution
Employer
2021/06/06 - Current Postdoc (Research) The University of Chicago, United States
Duchossois Family Institute , United States
2020/01/14 - 2021/06/05 Postdoc (Research) Instituto Gulbenkian de Ciência, Portugal
Instituto Gulbenkian de Ciência, Portugal

Others

Category
Host institution
Employer
2015/01/01 - 2020/01/13 PhD Student - Title: " Interspecies interactions in recovery of gut microbiota functions" Instituto Gulbenkian de Ciência, Portugal
Instituto Gulbenkian de Ciência, Portugal
2012/05/01 - 2014/12/31 Research Fellow (BI) - Title: "Inter-species cell-cell signaling: it's role in bacteria consortia" - Supervisor: Karina Xavier, PhD Instituto Gulbenkian de Ciência, Portugal
2011/12/01 - 2012/04/30 Research student - Supervisor: Margarida Sancho, PhD Instituto Português do Sangue e da Transplantação IP, Portugal
2010/08/01 - 2011/11/30 Master student - Title: “Osteogenic differentiation of Human Umbilical Cord-derived Stromal Cells on Human Amniotic Membrane” - Supervisor: Margarida Sancho, PhD Instituto Português do Sangue e da Transplantação IP, Portugal
2010/06/01 - 2010/07/31 Trainee - Supervisor: Sérgio Dias, PhD Instituto Português de Oncologia de Lisboa Francisco Gentil EPE Unidade de Investigação em Patobiologia Molecular, Portugal
2010/03/01 - 2010/05/31 Trainee - Supervisors: Prof. Solveig Thorsteinsdóttir and Prof. Élio Sucena Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2009/01/01 - 2009/02/28 Trainee - Supervisor: Prof Rui Malhó Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2008/02/01 - 2008/05/31 Volunteer - Supervisor: Prof. Manuel Bicho Instituto de Medicina Molecular, Portugal
2007/03/01 - 2007/08/30 Volunteer Lagartagis, Portugal
Projects

Grant

Designation Funders
2021/03/01 - Current Manipulating Quorum Sensing to promote Muribaculum resilience in gut microbiota dysbiosis
PTDC/BIA-MIC/6990/2020
Post-doc Fellow
Instituto Gulbenkian de Ciência, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2018/10/01 - 2022/02 Identification of novel quorum sensing signals in the mammalian gut microbiota
PTDC/BIA-MIC/30487/2017
PhD Student Fellow
Instituto Gulbenkian de Ciência, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2016/01 - 2018/12 The role of inter-species quorum sensing in the recovery from antibiotic-induced imbalances of gut microbiota
PTDC/BIA-MIC/4188/2014
PhD Student Fellow
Instituto Gulbenkian de Ciência, Portugal
Fundação para a Ciência e a Tecnologia, I.P.
Concluded

Contract

Designation Funders
2015/01 - 2018/12 "The role of cell-cell bacterial communication in the recovery from gut dysbiosis"
PD/BD/106000/2014
PhD Student Fellow
Instituto Gulbenkian de Ciência, Portugal
Fundação para a Ciência e Tecnologia
Concluded
Outputs

Publications

Journal article
  1. Oliveira, Rita A.; Cabral, Vitor; Xavier, Karina B.. "Microbiome–diet interactions drive antibiotic efficacy". Nature Microbiology 6 7 (2021): 824-825. http://dx.doi.org/10.1038/s41564-021-00926-8.
    10.1038/s41564-021-00926-8
  2. Oliveira, Rita A.; Ng, Katharine M.; Correia, Margarida B.; Cabral, Vitor; Shi, Handuo; Sonnenburg, Justin L.; Huang, Kerwyn Casey; Xavier, Karina B.. "Klebsiella michiganensis transmission enhances resistance to Enterobacteriaceae gut invasion by nutrition competition". Nature Microbiology 5 4 (2020): 630-641. http://dx.doi.org/10.1038/s41564-019-0658-4.
    10.1038/s41564-019-0658-4
  3. Ng, Katharine Michelle; Aranda-Díaz, Andrés; Tropini, Carolina; Frankel, Matthew Ryan; Van Treuren, William; O’Laughlin, Colleen T.; Merrill, Bryan Douglas; et al. "Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs". Cell Host & Microbe 26 5 (2019): 650-665.e4. http://dx.doi.org/10.1016/j.chom.2019.10.011.
    10.1016/j.chom.2019.10.011
  4. Thompson, J.A.; Oliveira, R.A.; Xavier, K.B.. "Chemical conversations in the gut microbiota". Gut microbes 7 2 (2016): 163-170. http://www.scopus.com/inward/record.url?eid=2-s2.0-85015632481&partnerID=MN8TOARS.
    10.1080/19490976.2016.1145374
  5. Thompson, J.A.; Oliveira, R.; Djukovic, A.; Ubeda, C.; Xavier, K.B.. "Manipulation of the quorum sensing signal AI-2 affects the antibiotic-treated gut microbiota". Cell Reports 10 11 (2015): 1861-1871. http://www.scopus.com/inward/record.url?eid=2-s2.0-84925600482&partnerID=MN8TOARS.
    10.1016/j.celrep.2015.02.049
  6. Thompson, J.A.; Oliveira, R.A.; Xavier, K.B.. "Can chatter between microbes prevent cholera?". Trends in Microbiology 22 12 (2014): 660-662. http://www.scopus.com/inward/record.url?eid=2-s2.0-84922768886&partnerID=MN8TOARS.
    10.1016/j.tim.2014.10.006
Thesis / Dissertation
  1. Oliveira, Rita. "Interspecies interactions in recovery of gut microbiota functions". PhD, Instituto Gulbenkian de Ciência, 2020.
  2. Oliveira, Rita. "Osteogenic differentiation of human umbilical cord- derived stromal cells on human amniotic membrane". Master, Fundação da Faculdade de Ciências da Universidade de Lisboa, 2011.
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2021/02/04 Discovery of keystone microbiota member providing colonization resistance to pathogens in the mammalian gut 1st Microbiome PT Summit
2019/07 Gut microbiota transmission prevents antibiotic-induced stochastic loss of colonization resistance Gordon Research Seminar on Microbial Adhesion and Signal Transduction
Gordon Research (Newport, United States)
2019/01 Gut microbiota transmission prevents antibiotic-induced stochastic loss of colonization resistance 1st Instituto Gulbenkian Ciência Retreat
Instituto Gulbenkian Ciência (Vimeiro, Portugal)
2018/03 Enhancing bacterial signalling to mediate recovery of gut microbiota 12th Annual Meeting of the Gulbenkian Students
Instituto Gulbenkian Ciência (Évora, Portugal)
2016/09 Bacterial Interspecies Signaling in Antibiotic-treated Microbiota 6th ASM Conference on Beneficial Microbes
American Society for Microbiology (Seattle, United States)
2015/12 Gut Bacterial Interspecies Communication Microbiotec15
Portuguese Society of Microbiology (Portugal)
2014/05 Sinalização em Bactérias – Do que se fala no intestino? Nacional Congress of APN - Portuguese Association of Nutritionists
Portuguese Association of Nutritionists (Porto, Portugal)

Event organisation

Event name
Type of event (Role)
Institution / Organization
2016/05 - 2016/05 Co-organiser of the International Annual Meeting of the Gulbenkian Students (AMeeGuS) for PhD students of Instituto Gulbenkian Ciência and Invited PhD Students from CRG (Barcelona), (May 2016). Setúbal, Portugal. (2016/05 - 2016/05)
Meeting (Member of the Organising Committee)
Instituto Gulbenkian de Ciência, Portugal

Committee member

Activity description
Role
Institution / Organization
2020/03 - 2020/07 Co-organizer of IGC COVID19 Initiative – national scientific effort to increase SARS-COV-2 diagnostics capability of Portugal during Covid-19 pandemic in 2020
Coordinator
Instituto Gulbenkian de Ciência, Portugal
2015/05 - 2019/07 PhD delegates member responsible for mediation between student body and direction of Instituto Gulbenkian Ciência
Member
Instituto Gulbenkian de Ciência, Portugal
2015/05 - 2016/05 PhD Committee member responsible for social activities and fundraising
Coordinator
Instituto Gulbenkian de Ciência, Portugal

Interview (tv / radio show)

Program Topic
2020/08/24 - Current "Bom Dia Portugal" - RTP television station - Identification of a bacterium with protective effect against intestinal infections (in Portuguese) Identificada bactéria com grande poder de proteção contra infeções
2020/01/21 - Current E=mc2 (Observador radio station) - A bacterium that reduces the risk of new infections (in Portuguese) Ciência Podcast - A bactária que reduz o risco de novas infecções

Mentoring / Tutoring

Topic Student name
2020/01 - 2021/01/18 Mentorship and training of Master student Ana Matias Ana Matias
2017/11 - 2020/01 Mentorship and training of Master Student Margarida Correia Margarida Correia
2013 - 2013 Mentoring and Training Undergraduate student Francisca Abrantes - Francisca Abrantes
Distinctions

Award

2018 Best Talk Award - 12th Annual Meeting of the Gulbenkian Students, Évora (Portugal)
2017 Travel Grant to attend to "Bacterial Pathogenesis and Host Response" in Cold Spring Harbor, New York (USA), award 200 USD
Cold Spring Harbor Laboratory, United States
2016 ASM Travel Grant to attend to the '6th ASM Conference on Beneficial Microbes' in Seattle, WA (USA), award 500 USD
American Society for Microbiology, United States
2014 ASM Travel Grant to attend to the '5th ASM Conference on Beneficial Microbes' in Washington, DC (USA), award 500 USD
American Society for Microbiology, United States
2014 PhD Fellowship - Doctoral Program in "Integrative Biology and Biomedicine" by FCT
Fundação para a Ciência e a Tecnologia, Portugal
2013 Best Poster Prize , FEBS/EMBO Lecture Course: Host-Microbes interactions, Spetses (Greece) - Award 500 Euros