Identification
Personal identification
- Full name
- Marinho Antunes Lopes
Citation names
- Lopes, Marinho
- M. A. Lopes
- Lopes, M
- Lopes, MA
Author identifiers
- Ciência ID
- AA15-82FC-6EAA
- ORCID iD
- 0000-0002-5764-2261
- Google Scholar ID
- rDa9xTcAAAAJ
Knowledge fields
- Medical and Health Sciences - Basic Medicine - Neurosciences
- Exact Sciences - Physical Sciences
- Exact Sciences - Mathematics - Applied Mathematics
Languages
Language | Speaking | Reading | Writing | Listening | Peer-review |
---|---|---|---|---|---|
Portuguese | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) |
English | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) | Proficiency (C2) |
Education
Degree | Classification | |
---|---|---|
2014/12/02
Concluded
|
Joint doctoral programme in Physics between the Universidade do Minho, the Universidade de Aveiro and the Universidade do
Porto (MAP-fis) (Doutoramento)
Universidade de Aveiro, Portugal
"Phase transitions and nonlinear phenomena in neuronal network models" (THESIS/DISSERTATION)
|
Approved (the ECTS Grading Scale was not applicab |
2010/07/08
Concluded
|
Física (Mestrado integrado)
Universidade de Aveiro, Portugal
"Stochastic resonance in neural networks" (THESIS/DISSERTATION)
|
18 |
2008/10/01
Concluded
|
Engenharia Física (Licenciatura)
Universidade de Aveiro, Portugal
"Study of the tidal effect in Hot Jupiters " (THESIS/DISSERTATION)
|
18 |
Affiliation
Science
Category Host institution |
Employer | |
---|---|---|
2020/02/03 - Current | Principal Investigator (Research) | Cardiff University, United Kingdom |
2019/06/01 - 2020/01/31 | Contracted Researcher (Research) | University of Bristol, United Kingdom |
2018/10/22 - 2019/05/31 | Contracted Researcher (Research) | University of Exeter College of Engineering Mathematics and Physical Sciences, United Kingdom |
2015/04/01 - 2018/10/21 | Contracted Researcher (Research) | University of Exeter College of Engineering Mathematics and Physical Sciences, United Kingdom |
2015/01/01 - 2015/03/31 | Researcher (Research) | Instituto de Nanoestruturas Nanomodelação e Nanofabricação, Portugal |
Universidade de Aveiro Departamento de Física, Portugal |
Positions / Appointments
Category Host institution |
Employer | |
---|---|---|
2021/02/01 - Current | Visiting Research Associate | King's College London, United Kingdom |
Others
Category Host institution |
Employer | |
---|---|---|
2015/09/19 - 2016/03/31 | As a Researcher Fellow, I lectured tutorial classes of Mathematics and Computing: Integrative Tools for Natural Sciences (NSC1002) to undergraduate students. | University of Exeter College of Engineering Mathematics and Physical Sciences, United Kingdom |
2012/02/01 - 2012/07/13 | As a PhD Student, I lectured laboratory classes of 'Mechanics and Oscillations' to undergraduate students. | Universidade de Aveiro Departamento de Física, Portugal |
2011/09/18 - 2012/01/31 | As a PhD Student, I lectured laboratory classes of 'Elements of Physics' to undergraduate students. | Universidade de Aveiro Departamento de Física, Portugal |
Projects
Grant
Designation | Funders | |
---|---|---|
2015/01/01 - 2015/03/31 | Random field Kuramoto Model on complex networks
I3N funding
Post-doc
|
Instituto de Nanoestruturas Nanomodelação e Nanofabricação |
2011/04/01 - 2014/12/04 | Response dynamics and stochastic resonance in noisy neural networks
SFRH/BD/68743/2010
PhD Student Fellow
|
Fundação para a Ciência e a Tecnologia |
2010/05/01 - 2011/03/31 | Stochastic Resonance in Neural Networks
PTDC/SAU-NEU/103904/2008
Master Student Fellow
|
Fundação para a Ciência e a Tecnologia |
Contract
Designation | Funders | |
---|---|---|
2020/02/03 - Current | Quantification and outcome prediction of epilepsy surgery using mathematical modelling
518428
Principal investigator
|
Wellcome Trust |
2019/06/01 - 2020/01/31 | Recurrence analysis for the characterisation and classification of epileptic patients
GW4 Accelerator Fund
Research Fellow
|
GW4 Alliance |
2018/10/22 - 2019/05/31 | An optimal computer model for the diagnosis and prognosis of focal epilepsies
P1505
Research Fellow
|
Epilepsy Research UK |
2015/04/01 - 2018/10/21 | Brain networks in epilepsy: Endophenotypes and generative models
MR/K013998/1
Research Fellow
|
Medical Research Council |
Outputs
Publications
Book |
|
Conference paper |
|
Conference poster |
|
Journal article |
|
Thesis / Dissertation |
|
Other
Other output |
|
Activities
Oral presentation
Presentation title | Event name Host (Event location) |
|
---|---|---|
2020/06 | Dynamics in brain networks: application to epilepsy | An introductory tutorial on computational modelling of brain dynamics
CUBRIC, Cardiff University (United Kingdom)
|
2020/03 | Recurrence Quantification Analysis of Dynamic Brain Networks and Computational Models to Inform Pre-surgical Evaluation of Epilepsy | Networks Approaches for Healthcare Applications
University of Exeter (United Kingdom)
|
2019/12 | Recurrence Analysis of Dynamic Brain Networks | The 8th International Conference on Complex Networks and Their Applications
(Portugal)
|
2019/09 | Mathematical modelling of epilepsy and its applications in epilepsy surgery and epilepsy classification | Systems and Control Group Workshop 2019
Universidade de Aveiro Departamento de Matemática (Portugal)
|
2019/02 | Mathematical modelling of epilepsy surgery | CEMPS Early Career Researcher Network Annual Conference
(United Kingdom)
|
2018/11 | Gigantes da Ciência, [Science outreach talk at the opening of a science exhibition at Benedita (Portugal)] | Gigantes da Ciência
Externato Cooperativo da Benedita (Portugal)
|
2018/07 | Elevated ictal brain network ictogenicity enables optimal epilepsy surgery prediction | 11th European Conference on Mathematical and Theoretical Biology (ECMTB)
(Portugal)
|
2018/06 | The role of network topology in emerging epileptiform dynamics | 4th International Conference on Mathematical NeuroScience (ICMNS)
(France)
|
2017/09 | An optimal strategy for epilepsy surgery: Disruption of the rich-club? |
Universidade de Aveiro Departamento de Física (Portugal)
|
2015/04 | Forecasting epileptic seizures in neuronal networks | Criticality in Biology: A Critical Assessment
(Germany)
|
2014/05 | Freak waves in neuronal networks | International Workshop-School Complexity, Chaos and Dynamics in Biological Networks
(France)
|
2013/01 | Emergence of Brain Waves as a Dynamical Phase Transition | MAP-Fis – PhD Research Conference
(Portugal)
|
2012/09 | Emergence of Brain Waves as a Dynamical Phase Transition | Física2012
(Portugal)
|
2012/09 | Stochastic Resonance as an Emergent Property of Neural Networks | 12th Granada Seminar – Physics, Computation, and the Mind
(Spain)
|
2012/02 | Emergence of Neural Synchrony and Stochastic Resonance in Neural Networks | Bridging statistical physics & optimization, interference & learning
(France)
|
Supervision
Thesis Title Role |
Degree Subject (Type) Institution / Organization |
|
---|---|---|
2021/01 - Current | Modelling the role of granule cells in memory formation
Co-supervisor
|
University of Exeter, United Kingdom
|
2018 - Current | Towards Personalized In-Silico Mathe- matical Models and Tools for Brain Networks Simulations and Study of Optimal Therapeutic
Approaches to Refractory Epilepsy
Co-supervisor
|
Instituto de Engenharia de Sistemas e Computadores Tecnologia e Ciência, Portugal
|
2020/05 - 2020/09 | Modelling epilepsy surgery and the impact on healthy brain dynamics (5 month rotation project)
Co-supervisor
|
University of Bristol Department of Engineering Mathematics, United Kingdom
|
2020/01 - 2020/05 | Modelling the Dynamics of the Dentate Gyrus (5 month rotation project)
Co-supervisor
|
University of Bristol Department of Engineering Mathematics, United Kingdom
|
2014 - 2015 | Random field Kuramoto Model on complex networks
Co-supervisor
|
Física (Master)
Universidade de Aveiro, Portugal
|
Event organisation
Event name Type of event (Role) |
Institution / Organization | |
---|---|---|
2020/05 - Current | Co-organisation of "An introductory tutorial on computational modelling of brain dynamics", held at Cardiff University (delivered
online due to covid-19), series of tutorials in May and June, 2020. (2020/05)
Workshop (Co-organisor)
|
Cardiff University, United Kingdom |
2018 - 2019 | International Conference for Technology and Analysis of Seizures, 2019 (ICTALS2019) - a leading conference on epilepsy research.
ICTALS2019 brought together neurologists, neuroscientists, researchers from quantitative disciplines and people with lived
experience of epilepsy in order to work as a community to advance our understanding of epilepsy and develop practical ways
to improve diagnosis and treatment.
http://www.exeter.ac.uk/livingsystems/newsandevents/events/ictals2019/ (2019/09/02 - 2019/09/05)
Conference (Member of the Organising Committee)
|
University of Exeter, United Kingdom |
2017/12 - 2018/04 | One day workshop entitled "Brain Networks and Neurological Disorders: from Theory to Clinic"
https://www.eventbrite.co.uk/e/brain-networks-and-neurological-disorders-from-theory-to-clinic-tickets-43019242713#
I was awarded £1000 to organize this workshop (see Distinctions). (2018/04/10 - 2018/04/10)
Workshop (Co-organisor)
|
University of Exeter, United Kingdom |
2018 - 2018 | Mini-symposium organisation within the conference ECMTB 2018.
Title of the mini-symposium: "Brain networks: a window on brain function and dysfunction" (2018/07/25 - 2018/07/25)
Symposium (Co-organisor)
|
Course / Discipline taught
Academic session | Degree Subject (Type) | Institution / Organization | |
---|---|---|---|
2015/09 - 2016/05 | Tutorial classes of "Mathematics and Computing: Integrative Tools for Natural Sciences (NSC1002)", 1st and 2nd terms | Mathematics and Computing: Integrative Tools for Natural Sciences (NSC1002) (Bachelor (1st cycle)) | University of Exeter, United Kingdom |
2012/01 - 2012/06 | Laboratory classes of "Mechanics and Oscillations" for undergraduate students. I was a PhD student at the time. | Mecânica e Oscilações (Licenciatura) | Universidade de Aveiro, Portugal |
2011/09 - 2012/01 | Laboratory classes of "Elements of Physics" for undergraduate students I was a PhD student at the time. | Elementos de Física (Licenciatura) | Universidade de Aveiro, Portugal |
Interview (newspaper / magazine)
Activity description | Newspaper / Forum | |
---|---|---|
2021/01/06 | Interview about science popularisation and the issues with the current "scientific system" | Barómetro Social (Universidade do Porto) |
2020 | Interview about one of my publications in Clinical Neurophysiology and science popularisation | Clinical Neurophysiology (social media) |
Journal scientific committee
Journal title (ISSN) | Publisher | |
---|---|---|
2020 - Current | Epilepsia | Wiley |
2020 - Current | IEEE Access | |
2020 - Current | Epilepsy Research | |
2019 - Current | NeuroImage (1095-9572) | Elsevier |
2019 - Current | Scientific Reports (2045-2322) | Springer Science and Business Media LLC |
2019 - Current | PLoS Computational Biology | |
2015 - Current | Brain Topography (1573-6792) | Springer-Verlag |
Other jury / evaluation
Activity description | Institution / Organization | |
---|---|---|
2020 - Current | Reviewer for UK Research Innovation (UKRI) funding schemes | |
2019 - Current | External Examiner of a PhD student’s course (Research Techniques), Doctoral Program in Biomedical Engineering | Universidade do Porto Faculdade de Engenharia, Portugal |
Distinctions
Award
2020 | Wellcome Trust ISSF Fellowship
Wellcome Trust, United Kingdom
|
2018 | Researcher-Led Initiative Award (£ 1000) to organise a workshop
University of Exeter, United Kingdom
|
2016 | Travel Grant to attend the Bernstein Conference 2016 at the Humboldt-Universität zu Berlin |
2016 | Bursary to attend the Meeting of Minds at Cardiff University |
2015 | Travel Stipend Award to attend the IWSP7: Epilepsy Mechanisms, Models, Prediction and Control at the University of Melbourne |
2010 | PhD fellowship
Fundação para a Ciência e a Tecnologia, Portugal
|
2009 | Merit Scholarship for Exceptional Performance
Universidade de Aveiro, Portugal
|
2008 | Award Best Student of the B.Sc. in Physical Engineering
Universidade de Aveiro Departamento de Física, Portugal
|
2008 | Award Oliveira & Irmão to the best final-year student of the B.Sc. in Physical Engineering |
Other distinction
2010 | II Local Engineering Competition in the modality of Case Study (1st place) |
2007 | Nightmat - National Math Competition (2nd place)
Universidade de Aveiro Departamento de Matemática, Portugal
|
2006 | Nightmat - National Math Competition (3rd place)
Universidade de Aveiro Departamento de Matemática, Portugal
|
2005 | Who wants to know more about Physics (2nd place) |