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Identification

Personal identification

Full name
Pedro Miguel Leal Rodrigues
Date of birth
1968/12/03
Gender
Male

Citation names

  • RODRIGUES, PEDRO
  • Rodrigues, M Pedro
  • Rodrigues, PM

Author identifiers

Ciência ID
AB10-DFDE-C2D6
ORCID iD
0000-0002-9668-1204
Google Scholar ID
https://scholar.google.com/citations?hl=en&user=KGxUPvEAAAAJ&view_op=list_works&gmla=AJsN-F66K4c3Qt6GOipjvofLGttAA6s8mPY2FDsVCWKQ1xaCktILVKlvIpOxiIipX1LE5rBVYxNunhWs4FFDsuylm3EigRUxq_TjXIBPKKsbfFjw9sCZIhE#d=gs_hdr_drw
Researcher Id
M-3406-2013
Scopus Author Id
55107531000

Email addresses

  • pmrodrig@ualg.pt (Professional)

Telephones

Telephone
  • 289800100 Ext.: 7855 (Professional)

Addresses

  • Universidade do Algarve. FCT, Edificio 7, Campus de Gambelas, 8005-139, Faro, Faro, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Marine Biology
  • Exact Sciences - Chemical Sciences - Organic Chemistry
  • Medical and Health Sciences - Health Sciences - Nutrition, Dietetics

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
Italian Advanced (C1) Intermediate (B1) Intermediate (B1) Advanced (C1)
French Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Spanish; Castilian Intermediate (B1) Intermediate (B1) Beginner (A1) Intermediate (B1)
Education
Degree Classification
2016 - 2017
Attended
 Curso "Manipulação de animais de laboratório” FELASA categoria B (Curso prático e teórico) (Outros)
Direcção-Geral de Alimentação e Veterinária, Portugal
1999
Concluded
 Química (Doutoramento)
Major in Química Inorgânica
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
"Estudos estruturais em ferredoxinas por Ressonância Magnética Nuclear" (THESIS/DISSERTATION)
 Aprovação com Unanimidade
1991
Concluded
 Química Aplicada ramo Química Orgânica (Licenciatura)
Universidade Nova de Lisboa Faculdade de Ciências e Tecnologia, Portugal
"Química Aplicada" (THESIS/DISSERTATION)
 15 valores
Affiliation

Science

Category
Host institution 		Employer
2001/01/01 - Current Principal Investigator (Research) Centro de Ciências do Mar, Portugal
2018/11/01 - 2018/11/30 Visiting Researcher (Research) Suranaree University of Technology, Thailand
Suranaree University of Technology Institute of Agricultural Technology, Thailand
2016/10/15 - 2016/10/31 Visiting Researcher (Research) Suranaree University of Technology, Thailand
Suranaree University of Technology Institute of Agricultural Technology, Thailand
2014/10/01 - 2015/01/31 Visiting Researcher (Research) University of the Western Cape Faculty of Natural Science, South Africa
University of the Western Cape, South Africa
2014/08/01 - 2014/08/31 Visiting Researcher (Research) DTU Institut for Systembiologi, Denmark
DTU Institut for Systembiologi, Denmark
2000/02/01 - 2000/02/29 Visiting Researcher (Research) University of California San Diego Department of Chemistry and Biochemistry, United States
University of California San Diego, United States
1998/07/01 - 1998/07/31 Visiting Researcher (Research) Helmholtz-Zentrum für Infektionsforschung Abteilung Genregulierung und -differenzierung, Germany
Helmholtz-Zentrum für Infektionsforschung Abteilung Genregulierung und -differenzierung, Germany
1997/04/01 - 1997/05/15 Visiting Researcher (Research) Mayo Clinic Department of Health Sciences Research, United States
Mayo Clinic Department of Health Sciences Research, United States
1995/01/01 - 1995/12/30 Research Trainee (Research) Universidade Nova de Lisboa Departamento de Química, Portugal
REQUIMTE Unidade de Ciências Biomoleculares Aplicadas, Portugal
1990/10/01 - 1991/08/31 Visiting Researcher (Research) Università degli Studi di Firenze, Italy
Università degli Studi di Firenze, Italy
1990/07/01 - 1990/09/30 Visiting Researcher (Research) Slovnaft AS, Slovakia
Slovnaft AS, Slovakia

Teaching in Higher Education

Category
Host institution 		Employer
2000/01/01 - Current Assistant Professor (University Teacher) Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal

Other Careers

Category
Host institution 		Employer
1993/10/01 - 1994/12/31 Assistente Técnico (Assistente Técnico) Hoechst Chemicals, Portugal
Hoechst Chemicals, Portugal

Positions / Appointments

Category
Host institution 		Employer
2014 - Current Membro da direção do Mestrado em Aquacultura e Pescas Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
2000 - Current Sócio Fundador Centro de Ciências do Mar, Portugal
Centro de Ciências do Mar, Portugal
2015 - 2017 Membro da direção do Mestrado em Ciências Biomédicas Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
2013 - 2016 Membro da direção do Mestrado em Engenharia do Ambiente Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
2008/10/01 - 2009/09/30 Organic Unit Vice-President Universidade do Algarve, Portugal
Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
2006 - 2008 Membro do Conselho Diretivo da Faculdade de Ciências do Mar e Ambiente Universidade do Algarve Faculdade de Ciências e Tecnologia, Portugal
Universidade do Algarve - Campus de Gambelas, Portugal

Others

Category
Host institution 		Employer
2010/09 - Current Head of the Proteomics Division of the Aquaculture Research Group Centro de Ciências do Mar, Portugal
Universidade do Algarve, Portugal
Projects

Grant

Designation Funders
2012 - Current Assesing the effect of dietary protein content on the metabolic response of Senegalese sole exposed to handling stress through a proteomics approac
No reference
Invited Scientist Fellow
Italian Proteomics Association, Italy
 Italian Proteomics Association
Concluded
2019/11/17 - 2019/11/20 Proteómica e sus aplicaciones in acuicultura
No reference
Invited Scientist Fellow
Universidad Nacional de Costa Rica
Concluded
2019/05/24 - 2019/05/28 Erasmus Plus
P FARO02
Invited Scientist Fellow
Erasmus Plus, Belgium
 European Commission Seventh Framework Programme for Research and Technological Development
Concluded
2018/11 - 2018/12 EURASTiP – Promoting Multi-Stakeholder Contributions to International Cooperation on Sustainable Solutions for Aquaculture Development in South-East Asia
Grant agreement ID: 728030
Invited Scientist Fellow
European Commission
2016/10/01 - 2017/01/31 MALDI Imaging technologies applied to fish samples
No reference
Invited Scientist Fellow
University of the Western Cape, South Africa
Concluded
2016/10/15 - 2016/10/31 Proteomics technologies applied to Aquaculture
No reference
Invited Scientist Fellow
Suranaree University of Technology, Thailand
 Suranaree University of Technology
Concluded
2014 - 2014 Farmed fish quality and welfare monitoring using proteomic
No reference
Invited Scientist Fellow
European Federation of Animal Sciences, Denmark
 European Cooperation in Science and Technology
Concluded
1996 - 1999 Structural studies in Ferredoxins by Nuclear Magnetic Resonance
-
PhD Student Fellow
Universidade Nova de Lisboa, Portugal
 Fundação para a Ciência e a Tecnologia
Concluded
1998/07/01 - 1998/07/31 Estudos Estruturais por RMN em Ferredoxinas
No reference
Invited Scientist Fellow
Helmholtz-Zentrum für Infektionsforschung Abteilung Genregulierung und -differenzierung, Germany
 Fundação para a Ciência e a Tecnologia
Concluded
1997/04/01 - 1997/05/15 Ferredoxina II - Produção
No reference
Invited Scientist Fellow
Mayo Clinic Department of Health Sciences Research, United States
 Fundação Luso-Americana
Concluded
1990/10/01 - 1991/08/31 Sintese de Macrociclos
No reference
Invited Scientist Fellow
Università degli Studi di Firenze, Italy
 Erasmus
Concluded

Contract

Designation Funders
2021 - Current S2AQUAcoLAB - Laboratório Colaborativo em Aquacultura Sustentável e Inteligente
S2AQUAcoLAB
Researcher
Ongoing
2023/04 - 2026/04 Digital learning in aquaculture 4.0 for the technological training of fish farm technicians – AQUATECHInn
ERASMUS-EDU-2021-PI-ALL-INNO. Grant 101055941
Researcher
Erasmus
Ongoing
2021/01 - 2025/01 European Aquaculture Training for improving Seafood Husbandry - EATFISH
Horizon 2020 Framework Programme: Marie Curie Innovative Training Network. Project number 956697
Researcher
European Commission Third Framework Programme
Ongoing
2019/11/01 - 2023/10/31 The Core Outcome Measures for Food Allergy (COMFA)
CA18227
Researcher
Imperial College London, United Kingdom
 European Cooperation in Science and Technology
Ongoing
2020/04 - 2022/04 Natural antimicrobials and pyrexia as alternative strategies to the use of antibiotics to prevent pathogens in aquaculture – BIOIMMUNE
16-02-05-FMP-052
Principal investigator
Universidade do Algarve, Portugal
 Fundo Europeu dos Assuntos Marítimos e das Pescas
Ongoing
2018/04/01 - 2021/08/31 Estabelecimento de biomarcadores de bem-estar em peixe de aquacultura através de uma abordagem proteómica - WELFISH
16-02-05-FMP-12
Principal investigator
Universidade do Algarve, Portugal
 Fundo Europeu dos Assuntos Marítimos e das Pescas
Ongoing
2018/07/01 - 2020/12/31 Early metabolic programming in fish through nutritional modulation. - PROLAR
02/SAICT/2017/29151
Researcher
Centro de Ciências do Mar, Portugal
 Fundação para a Ciência e a Tecnologia
Ongoing
2017/10/01 - 2020/09/30 Desenvolvimento de um peixe de aquacultura com reduzido teor alergènico - ALLYFISH
16-02-01-FMP-0014
Principal investigator
Universidade do Algarve, Portugal
 Fundo Europeu dos Assuntos Marítimos e das Pescas
Ongoing
2017/06/01 - 2019/12/31 Estudio integral de los bancos naturales de moluscos bivalvos en el Golfo de Cádiz para su gestión sostenible y la conservación de sus habitats asociados - VENUS
0139_VENUS_5_E
Researcher
Universidade do Algarve, Portugal
 Fundo Europeu de Desenvolvimento Regional
Ongoing
2015/10/01 - 2018/12/31 Bases para uma alimentação saudável e sustentável para peixes de aquaculture – ALISSA (Healthy and sustainable feeds for farmed fish)
ALG-01-0247-FEDER-003520
Principal investigator
Universidade do Algarve, Portugal
 Fundo Europeu de Desenvolvimento Regional
Concluded
2014/11/01 - 2018/11/01 Improving Allergy risk assessment strategy for new food proteins (IMPARAS)
COST action FA1402
Researcher
Centro de Ciências do Mar, Portugal

Universidade do Algarve, Portugal
European Cooperation in Science and Technology
Concluded
2014/06/01 - 2015/12/31 Desenvolvimento do peixe de aquaculture como alimento functional: Fortificação em nutrients naturais e redução do potencial alergénico – AQUAVALOR
31-03-05-FEP-0060
Principal investigator
Universidade do Algarve, Portugal
 Fundo Europeu dos Assuntos Marítimos e das Pescas
Concluded
2010/11/01 - 2014/11/01 Farm animal proteomics
COST action FA1002
Researcher
Centro de Ciências do Mar, Portugal

Universidade do Algarve, Portugal
European Cooperation in Science and Technology
Concluded
2011/09/01 - 2014/08/31 Desenvolvimento de um alimento que reduza os efeitos da doença de inverno na dourada com recurso a indicadores moleculares de condição - INUTR (Development of a feed to reduce the effects of Winter disease in Gilthead seabream recurring to molecular
Project 21595-INUTR
Principal investigator
Universidade do Algarve, Portugal
 Fundo Europeu de Desenvolvimento Regional
Concluded
2011/01/01 - 2014/06/30 Nova abordagem para a identificação de alvos terapeuticos da osteoartrite: Aplicação da proteomica 2D-DIGE
PTDC/SAU-ORG/112832/2009
Centro de Ciências do Mar, Portugal

Hospital de Faro, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2011/01 - 2014/06 A new approach for the identification of osteoarthritis terapeutic targets:The application of 2D-DIGE proteomics
Provided by PTCRIS: 112832
112832
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2011/01/01 - 2012/12/31 Cooperação transfronteiriça para o desenvolvimento de boas prácticas sanitárias na aquacultura marinha. Transborder cooperation for the development of good sanitarian practice in marine aquaculture - BONAQUA
0433-BONAQUA-5-E
Principal investigator
Universidade do Algarve, Portugal
 FEDER
Concluded
2011/01/01 - 2012/12/31 Projecto Estratégico - LA 15 - 2011-2012
PEst-C/MAR/LA0015/2011
Centro de Investigação Marinha e Ambiental, Portugal

Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

Centro de Ciências do Mar, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2010/10/01 - 2012/08/31 Desenvolvimento de um alimento microencapsulado para larvas de peixes – MICALA (Development of a microencapsulated feed for fish larvae) - MICALA
QREN2010
Researcher
Universidade do Algarve, Portugal
 FEDER
Concluded
2008/08 - 2011/12 Post-mortem changes in gilthead sea bream muscle proteins: its implications to flesh texture - TEXBREAM
Provided by PTCRIS: 70858
70858
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2008/08 - 2011/11 HYDRAA - Improved dietary nitrogen formulations for marine fish larvae: effects on growth performance and skeletal formation
71685
Provided by PTCRIS: 71685
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2005/06 - 2008/05 Characterisation of the folate and purine metabolism in the protozoan parasite Perkinsus atlanticus: identification of genes involved in these pathways and potential therapeuthic targets
Provided by PTCRIS: 57982
57982
Researcher
Fundação para a Ciência e a Tecnologia, I.P.
2007/04/01 - 2008/03/31 Identificação de indicadores moleculares de bem-estar durante o cultivo de peixes em aquaculture (Identification of welfare biomarkers during fish farming in aquaculture).
Ceratonia Prize for best project 2007 in Sea Sciences
Principal investigator
Universidade do Algarve, Portugal
 Caixa Geral de Depositos
Concluded
2005/04/01 - 2008/03/30 Differential protein expression in relation to dietary AA composition: a proteomic approach towards understanding growth in fish
165203/S40
Researcher
Norges forskningsråd, Norway
 Norges forskningsråd
Concluded
2005/11/01 - 2007/10/31 Dietary amino acids and skeletal development in white bream (Diplodus spp.) - SAARGO
POCI/MAR/61623/2004
Researcher
Universidade do Algarve, Portugal
 POCI, MAR
Concluded
Outputs

Publications

Book
  1. Rodrigues, P.M.; Martin, S.A.M.; Silva, T.S.; Boonanuntanasarn, S.; Schrama, D.; Moreira, M.; Raposo, C.. Proteomics in fish and aquaculture research. 2018.
  2. Rodrigues, P.M.; Campos, A.; Kuruvilla, J.; Schrama, D.; Cristobal, S.. Proteomics in Aquaculture: Quality and Safety. 2017.
  3. Rodrigues, P.M.; Schrama, D.; Campos, A.; Osório, H.; Freitas, M.. Applications of proteomics in aquaculture. 2016.
Book chapter
  1. Farinha, Ana Paula; Moreira, Márcio; de Magalhães, Cláudia Raposo; Schrama, Denise; Cerqueira, Marco; Carrilho, Raquel; Rodrigues, Pedro M.. "Proteomics for Quality and Safety in Fishery Products". In Sustainable Fish Production and Processing, 45-78. Elsevier, 2022.
    10.1016/b978-0-12-824296-4.00007-4
  2. RODRIGUES, PEDRO. "Proteomics for quality and safety in fishery products". In Sustainable Fish Production and Processing. Elsevier, 2021.
    In press
  3. Cerqueira, Marco; Farinha, Ana Paula; Schrama, Denise; Moreira, Márcio; Raposo de Magalhães, Cláudia; RODRIGUES, PEDRO. "Proteomics for Fish Authentication". In Proteomics for food Authentication, edited by Leo M.L. Nollet, Semih Ötles, 177. CRC Press, 2020.
    Published
  4. Rodrigues, Pedro M.; Martin, Samuel A. M.; Silva, Tomé S.; Boonanuntanasarn, Surintorn; Schrama, Denise; Moreira, Márcio; Raposo, Cláudia. "Proteomics in Fish and Aquaculture Research". In Proteomics in Domestic Animals: from Farm to Systems Biology, 311-338. Springer International Publishing, 2018.
    10.1007/978-3-319-69682-9_16
  5. Rodrigues, Pedro M.; Campos, Alexandre; Kuruvilla, Jacob; Schrama, Denise; Cristobal, Susana. "Proteomics in Aquaculture: Quality and safety". In Proteomics in Food Science, 279-295. Elsevier, 2016.
    10.1016/b978-0-12-804007-2.00017-5
  6. Rodrigues, Pedro M.; Schrama, Denise; Campos, Alexandre; Osório, Hugo; Freitas, Marisa. "Applications of Proteomics in Aquaculture". In Agricultural Proteomics Volume 1, 175-209. Springer International Publishing, 2016.
    10.1007/978-3-319-43275-5_10
Conference abstract
  1. Schrama, Denise; Raposo, Claúdia S.; Cerqueira, Marco; Kuehn, Annette; Morriset, Martine; RODRIGUES, PEDRO. "Effect of diet supplementation on the modulation of fish allergenicity". Paper presented in L’Acqua 2018. Latin American & Caribbean Aquaculture, Bogotá, 2018.
  2. Schrama, Denise; Raposo, Claúdia S.; Kuehn, Annette; RODRIGUES, PEDRO. "Allergen identification in two main Mediterranean fish species using proteomics". Paper presented in 3rd ImpARAS conference, Helsingør, 2017.
  3. Schrama, Denise; Colen, Rita; Engrola, Sofia; Silva, Tomé; RODRIGUES, PEDRO. "Effects of amino acid supplementation on the performance of gilthead seabream using 2D-DIGE". Paper presented in HUPO2017 - 16th Human Proteome Organization World Congress, Dublin, 2017.
  4. RODRIGUES, PEDRO; Schrama, Denise; Raposo, Claúdia S.. "Modulation of fish allergenicity towards the production of a low allergen farmed fish; a proteomics approach". Paper presented in 8th International Conference on Proteomics and Bioinformatics, Osaka, 2017.
  5. Schrama, Denise; Raposo, Claúdia S.; Kuehn, Annette; RODRIGUES, PEDRO. "Effect of EDTA Enriched Diets in Fish Allergenicity; A Proteomics Approach". Paper presented in 2nd International Conference of Imparas – Improving Allergy risk Assessment strategy for new food proteins, Warsaw, 2016.
  6. Schrama, Denise; Engrola, Sofia; Colen, Rita; Silva, Tomé; RODRIGUES, PEDRO. "Effects of supplementation in histidine, threonine and tryptophan on Gilthead seabream imune status using a proteomics approach". Paper presented in 15th Human Proteome Organization World Congress, Taipé, 2016.
  7. RODRIGUES, PEDRO; Schrama, Denise. "Creatine supplementation to modulate allergenicity in European seabass; a proteomics study". Paper presented in 2nd Global Summit on Aquaculture & Fisheries, Kuala Lumpur, 2016.
  8. Schrama, Denise; Raposo, Claúdia S.; RODRIGUES, PEDRO. "Creatine supplementation on fish main allergen b-parvalbumin, using a proteomics approach". Paper presented in X Annual Congress of the European Proteomics association, Istambul, 2016.
  9. Moreira, Márcio; Schrama, Denise; Soares, Florbela; Pousão-Ferreira, Pedro; RODRIGUES, PEDRO. "Proteomic analysis of gilthead sea bream (Sparus aurata) plasma with amyloodiniosis". Paper presented in Farmed animal proteomics 2014 annual meeting, Milano, 2014.
  10. Scrama, Denise; Silva, Tomé; Richard, Nadège; Figueiredo, Filipe; Burchmore, Richard; Eckersall, David; Dias, Jorge; Conceição, Luis E.C.; RODRIGUES, PEDRO. "Dietary effects influence on Gilthead seabream winter syndrome; an integrated metabolomics and proteomics analysis on plasma profiling". Paper presented in 10th annual conference of the metabolomics society, Tsuruoka, 2014.
  11. RODRIGUES, PEDRO; Silva, Tomé; Richard, Nadège; Schrama, Denise; Dias, Jorge; Conceição, Luis E.C.; Rosa da Costa, Ana. "Integrated proteomic and metabolic profiling of gilthead seabream liver to track interactions between dietary factors and seasonal temperature variations". Paper presented in 9th annual conference of the metabolomics society, Glasgow, 2013.
  12. Luis, Inês M.; Soggiu, Allessio; Roncada, Paola; Bonizzi, Luigi; Schrama, Denise; Dias, Jorge; Prates, Sara; RODRIGUES, PEDRO. "Allergen Characterization in Mediterranean farmed fish: a proteomic approach". Paper presented in Farmed animal proteomics 2013 annual meeting, Kosice, 2013.
  13. RODRIGUES, PEDRO; Richard, Nadège; de Vareilles, M.; Silva, Tomé; Canada, P.; Engrola, Sofia; Pinto, W.; Dias, Jorge; Conceição, Luis E.C.. "Proteomics as a toll to evaluate the bioactivity effects of farmed senegales sole fed with a new developed microencapsulated feed". Paper presented in EuPA 2012 Scientific Meeting, Glasgow, 2012.
  14. Richard, Nadège; Gavaia, Paulo; de Vareilles, M.; Silva, Tomé; Cordeiro, Odete; RODRIGUES, PEDRO; Conceição, Luis E.C.. "Two-dimensional proteomics as a tool to evaluate nutritional effects in farmed fish". Paper presented in Farm Animal Proteomics Spring Meeting 2012, Vilamoura, 2012.
  15. Silva, Tomé; RODRIGUES, PEDRO; Matos, Elisabete; Wulff, Tune; Cordeiro, Odete; Alves, Ricardo; Richard, Nadège; et al. "Proteomics as a tool to understand fish stress in aquaculture". Paper presented in Farm Animal Proteomics Spring Meeting 2012, Vilamoura, 2012.
  16. de Vareilles, Mahaut; Conceição, Luis E.C.; Gómez-Requeni, P.; Kousoulaki, K.; RODRIGUES, PEDRO; Richard, Nadège; Fladmark, Kari E.; et al. "The muscle proteome of growing zebrafish is affected by dietary lysine". Paper presented in 12th International Congress on Amino Acids, Peptides and Proteins, Beijing, 2011.
  17. Cordeiro, Odete; Silva, Tomé; Alves, Ricardo; Costas, Benjamin; Wullf, Tune; Richard, Nadège; de Vareilles, Mahaut; Conceição, Luis E.C.; RODRIGUES, PEDRO. "Changes in the liver proteome of Senegalese sole in response to repeated handling stress: the unfolded protein response". Paper presented in 4th EuPA Scientific Meeting. A Proteomics Odyssey Towards Next Decades, Lisbon, 2010.
  18. RODRIGUES, PEDRO; Silveira, Célia; Cordeiro, Odete; Dall'Agnol, Leonardo; Moura, Isabel; Moura, J. J. G.; Almeida, A.M.. "Study of Desulfovibrio desulfuricans ATCC 27774 Respiratory Flexibility using a Differential in Gel Electrophoresis Approach". Paper presented in 4th EuPA Scientific Meeting. A Proteomics Odyssey Towards Next Decades, Lisbon, 2010.
  19. Oliveira, Daniel; Cavaco, Sofia; Silva, Tomé; Cordeiro, Odete; RODRIGUES, PEDRO; Simes, Dina. "Proteomic analysis of nacre soluble matrix proteins from Crassostrea Gigas". Paper presented in 4th EuPA Scientific Meeting. A Proteomics Odyssey Towards Next Decades, Lisbon, 2010.
  20. RODRIGUES, PEDRO; Silva, Tomé; Cordeiro, Odete; Conceição, Luis E.C.. "Proteomic characterization of reared white seabream skeletal deformities using two-dimensional gel electrophoresis: a comparative study". Paper presented in 3rd EuPA congress on Clinical Proteomics, Stockholm, 2009.
  21. RODRIGUES, PEDRO; Cordeiro, Odete; Silva, Tomé; Conceição, Luis E.C.. "Skeletal development analysis by two-dimensional electrophoresis (2-DE) in white bream (Diplodus sargus), fed with different diets". Paper presented in Journal of Bone and Mineral Research, 2007.
  22. Leite, R. B.; Elandalloussi, L.; Afonso, R.; RODRIGUES, PEDRO; Ascenso, R.; Cancela, M. L.. "An overview of the metabolic pathways in the protozoan parasite Perkinsus Atlanticus/Olseni: Identification of potential targets for therapeutic drugs". Paper presented in Acta Parasitológica Portuguesa, 2005.
  23. RODRIGUES, PEDRO; Elandalloussi, L. M.; Cancela, M. L.. "Effect of new drugs on the proliferation of Perkinsus atlanticus, towards the development of a therapy". Paper presented in The European Journal of Biochemistry., 2004.
  24. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Characterization of a new 8Fe protein isolated from Desulfovibrio desulfuricans ATCC 27774". Paper presented in Journal of Inorganic Biochemistry, 2003.
  25. Laizé, V.; Pinto, J. P.; Pombinho, A. R.; RODRIGUES, PEDRO; Cancela, L.. "Development of an in vitro bone-derived cell system from a teleost fish to analyse the regulatory pathways responsible for the bone-specific expression of osteocalcina". Paper presented in European Journal of Biochemistry, 2001.
  26. Cancela, L.; Simes, D.; RODRIGUES, PEDRO; Conceição, N.; Reia, J. P.; Willianson, M. K.; Price, P. A.. "Expression of Matrix Gla Protein (MGP) in fish and amphibian: a model system to study the evolution of MGP function". Paper presented in Journal of Bone and Mineral Research, 2000.
Conference paper
  1. Schrama, Denise; Raposo, Claúdia S.; RODRIGUES, PEDRO. "Modulation of fish allergenicity towards the production of a low allergen farmed fish". Paper presented in ICMBO 2018: 20th International Conference on Marine Biology and Oceanography, Vancouver, 2019.
  2. Raposo de Magalhães, Cláudia; Cerqueira, Marco; Schrama, Denise; Farinha, Ana Paula; Revets, Dominique; Kuehn, Annette; Boonanuntanasarn, Surintorn; Nakharuthai, Chatsirin; RODRIGUES, PEDRO. "Welfare biomarkers for farmed gilthead sea bream (Sparus Aurata): Integrating multi-omics data". Paper presented in HUPO 2019, 18th Human Proteome Organization World Congress, 2019.
  3. RODRIGUES, PEDRO; Schrama, Denise; Raposo de Magalhães, Cláudia; Kuehn, Annette. "Effect of EDTA supplementation on gilthead seabream allergenicity; a proteomics approach". Paper presented in Asian Pacific Aquaculture (WAS), 2019.
  4. Raposo de Magalhães, Cláudia; Schrama, Denise; Cerqueira, Marco; Farinha, Ana Paula; Revets, Dominique; Kuehn, Annette; Boonanuntanasarn, Surintorn; Nakharuthai, Chatsirin; RODRIGUES, PEDRO. "Establishment of farmed fish welfare biomarkers; a multi-omics approach". Paper presented in XIII Annual Congress of the European Proteomics Association: From Genes via Proteins and their Interactions to Function, 2019.
  5. Farinha, Ana Paula; Cerqueira, Marco; Schrama, Denise; Raposo de Magalhães, Cláudia; Colen, Rita; Engrola, Sofia; RODRIGUES, PEDRO. "Effects of methionine supplementation on the performance of European seabass using a shotgun proteomics approach". Paper presented in Proteomic Forum 2019, XIII Annual Congress of the European Proteomics Association, 2019.
  6. Schrama, Denise; Colen, Rita; Engrola, Sofia; Silva, Tomé; RODRIGUES, PEDRO. "Effects of histidine, threonine and tryptophan supplementation on the performance of gilthead seabream using 2D-DIGE". Paper presented in 2018 International Conference on Sustainable Global Aquaculture (ICSGA), 2018.
  7. RODRIGUES, PEDRO; Schrama, Denise; Raposo, Claúdia S.. "Modulation of fish allergenicity towards the production of a low allergen farmed fish; a proteomics approach". Paper presented in 8th International Conference on Proteomics and Bioinformatics, 2017.
  8. Schrama, Denise; Raposo, Claúdia S.; RODRIGUES, PEDRO. "Creatine supplementation effect on fish main allergen ß-parvalbumin, using a proteomics approach". Paper presented in X Annual congress of the European proteomics association, 2016.
  9. RODRIGUES, PEDRO; Schrama, Denise. "Creatine supplementation to modulate allergenicity in European seabass; a proteomics study". Paper presented in 2nd Global summit on aquaculture & fisheries, 2016.
  10. Silva, Tomé; Cordeiro, O.; Jessen, F.; Dias, J.; RODRIGUES, PEDRO. "Assessment of the reproducibility of a muscle fractionation procedure for comparative proteomics using 2DE and metric multidimensional scaling". Paper presented in HUPO 2010, Human Proteome world congress, 2010.
Conference poster
  1. Cerqueira, Marco; Schrama, Denise; Farinha, Ana Paula; RODRIGUES, PEDRO. "The effects of dietary creatine on muscle quality and allergen parvalbumin modulation of Dicentrarchus labrax". Paper presented in Aquaculture Europe 2019, 2019.
  2. RODRIGUES, PEDRO; Moreira, Márcio; Costas, Benjamin; Marques, Cátia; Schrama, Denise; Soares, Florbela. "Is amyloodiniosis a neglected disease in Aquaculture research?". Paper presented in 19th International Conference on Diseases of Fish and Shellfish, 2019.
  3. Raposo de Magalhães, Cláudia; Cerqueira, Marco; Schrama, Denise; Farinha, Ana Paula; Revets, Dominique; Kuehn, Annette; Boonanuntanasarn, Surintorn; Nakharuthai, Chatsirin; RODRIGUES, PEDRO. "Using an integrated multi-omics approach to validate more robust welfare biomarkers in gilthead seabream". Paper presented in Multiomics to Mechanisms - Challenges in Data Integration, 2019.
  4. Raposo de Magalhães, Cláudia; Schrama, Denise; Cerqueira, Marco; Farinha, Ana Paula; Revets, Dominique; Kuehn, Annette; Boonanuntanasarn, Surintorn; Nakharuthai, Chatsirin; RODRIGUES, PEDRO. "Establishment of farmed fish welfare biomarkers; a multi-omics approach". Paper presented in 15th International Conference and Exhibition on Metabolomics & Systems Biology, 2019.
  5. Raposo de Magalhães, Cláudia; Schrama, Denise; Cerqueira, Marco; RODRIGUES, PEDRO. "Establishment of farmed fish welfare biomarkers: a proteomics approach". Paper presented in ICSGA 2019: 21st International Conference on Sustainable Global Aquaculture., 2019.
  6. Schrama, Denise; Raposo de Magalhães, Cláudia; Cerqueira, Marco; RODRIGUES, PEDRO. "Effect of creatine supplementation on Sparus aurata allergens by comparative proteomics". Paper presented in L’Acqua 2019, Latin American & Caribbean Aquaculture, 2019.
  7. Cerqueira, Marco; Farinha, Ana Paula; Schrama, Denise; Silva, Tomé; Colen, Rita; Conceição, Luis; Engrola, Sofia; RODRIGUES, PEDRO. "The effects of dietary trypthophan in the liver proteome of Gilthead Seabream". Paper presented in L’Acqua 2019, Latin American & Caribbean Aquaculture, 2019.
  8. Farinha, Ana Paula; Cerqueira, Marco; Schrama, Denise; Raposo de Magalhães, Cláudia; Silva, Tomé; Conceição, Luis; Engrola, Sofia; RODRIGUES, PEDRO. "Dietary effects of methionine in atlantic seabass analysed by shotgun proteomics". Paper presented in L’Acqua 2019, Latin American & Caribbean Aquaculture, 2019.
  9. RODRIGUES, PEDRO; Schrama, Denise; Raposo, Claúdia S.. "Allergenicity modulation of farmed fish". Paper presented in 20th World Congress on Nutrition & Food Sciences, 2018.
  10. Raposo, Claúdia S.; Schrama, Denise; Kuehn, Annette; Morisset, Martine; RODRIGUES, PEDRO. "Effect of EDTA enriched diets on farmed fish allergenicity; a proteomics approach". Paper presented in 2nd ImpARAS Conference, 2016.
  11. Schrama, Denise; RODRIGUES, PEDRO. "Supplementation with creatine to modulate parvalbumin expression in Seabass". Paper presented in Fenacam & Lacqua/Sara (WAS) 2015, 2015.
  12. Schrama, Denise; Mohamed, G.; Hüsselmann, L.H.H.; Ndimba, B.K; RODRIGUES, PEDRO. "Effect of Creatine Supplementation in Fish Allergenic Potential; A Proteomics Study". Paper presented in XXIV World Allergy Congress, 2015.
  13. Conceição, Luis E.C.; de Vareilles, Mahaut; Richard, Nadège; RODRIGUES, PEDRO; Rønnestad, Ivar; Yúfera, Manuel. "Dietary nitrogen requirements in larval sparids". Paper presented in World Aquaculture 2011, 2011.
  14. de Vareilles, Mahaut; Gómez-Requeni, P.; Kousoulaki, K.; Richard, N.; Cordeiro, O.; Silva, T. S.; RODRIGUES, PEDRO; et al. "Growth and muscle proteome response to a dietary lysine unbalance in zebrafish juveniles". Paper presented in Book of abstracts of the EAS Aquaculture Europe 2010 Conference, 2010.
  15. Richard, Nadège; de Vareilles, Mahaut; Gavaia, Paulo; Silva, Tomé; Cordeiro, Odete; Yúfera, Manuel; RODRIGUES, PEDRO; Conceição, Luis E.C.. "Inclusion of protein hydrolysates in the diet of white seabream (Diplodus sargus) larvae: impacts on skeleton quality and larvae proteome expression". Paper presented in The 14th International Symposium on Fish Nutrition and Feeding, 2010.
  16. Matos, Elisabete; Dinis, Maria Teresa; RODRIGUES, PEDRO; Valente, Luísa M. P.; Gonçalves, Amparo; Nunes, Maria Luisa; Dias, Jorge. "Farming practices of gilthead seabream (Sparus aurata) in semi-intensive earth ponds: effects on the flesh quality". Paper presented in SEACASE 2010, 2010.
  17. Richard, Nadège; Cordeiro, Odete; Silva, Tomé; de Vareilles, Mahaut; Alves, Ricardo; Costas, Benjamin; Wulff, Tune; RODRIGUES, PEDRO; Conceição, Luis E.C.. "Effects of Amino acid supplementation on liver proteome of senegalese sole juveniles exposed to handling stress". Paper presented in Book of abstracts of the EAS Aquaculture Europe 2010 Conference, 2010.
  18. Silva, Tomé; Dias, J.; Cordeiro, O.; Matos, E.; Wulff, T.; Jessen, F.; RODRIGUES, PEDRO. "Post-mortem sarcoplasmic proteomic profile of gilthead seabream is affected by pre-slaughter stress levels". Paper presented in Book of abstracts of the EAS Aquaculture Europe 2010 Conference, 2010.
  19. Silva, Tomé; Dias, Jorge; Cordeiro, Odete; Matos, Elisabete; Wulff, Tune; Jessen, Fleming; RODRIGUES, PEDRO. "Effect of harvesting stress on post-mortem changes in the sarcoplasmic proteomic profile of gilthead seabream (Sparus aurata) muscle". Paper presented in TAFT 2009 - 3rd Joint Trans-Atlantic Fisheries Technology Conference, 2009.
  20. Silva, Tomé; Jessen, Fleming; Dias, Jorge; Cordeiro, Odete; RODRIGUES, PEDRO. "On the reproducibility of a fractionation procedure for fish muscle proteomics". Paper presented in Ninth International Symposium on Mass Spectrometry in the Health and Life Sciences, 2009.
  21. Richard, Nadège; Gavaia, Paulo; Cordeiro, Odete; Silva, Tomé; Rodrigues, C; RODRIGUES, PEDRO; Conceição, Luis E.C.. "Vitamin K supplementation in the diet affects the proteome and skeletal development of Senegalese sole (Solea senegalensis)". Paper presented in Interdisciplinary Approaches in Fish Skeletal Biology, 2009.
  22. Richard, Nadège; Gavaia, Paulo; Cordeiro, Odete; Silva, Tomé; Rodrigues, C.; RODRIGUES, PEDRO; Conceição, Luis E.C.. "Dietary vitamin K supplementation and expression of proteins involved in skeleton development of Senegalese sole (Solea senegalensis)". Paper presented in XIII International Symposium on Nutrition and Feeding in Fish, 2008.
  23. RODRIGUES, PEDRO; Elandalloussi, L.; Afonso, R.; Cancela, M.. "Shikimate and Folate pathways as targets for parasitic therapy in the protozoan parasite Perkinsus atlanticus". Paper presented in Keystone symposia. Drugs against protozoan parasites: Target selection, structural biology and medicinal chemistry, 2005.
  24. RODRIGUES, PEDRO; Elandaloussi, L. M.; Afonso, R.; Leite, R. B.; Cancela, M.. "Proliferation studies of he Protozoan Perkinsus atlanticus under target selective drugs". Paper presented in XIV Congress Nacional de Bioquímica, 2004.
  25. Leite, R. B.; Elandaloussi, L. M.; Afonso, R.; RODRIGUES, PEDRO; Cancela, M.. ". Identification, cloning and regulation of a bifunctional enzyme from the de novo pathway of purine synthesis in Perkinsus atlanticus: Functional implications". Paper presented in XIV Congress Nacional de Bioquímica, 2004.
  26. Leite, R. B.; RODRIGUES, PEDRO; Elandalloussi, L. M.; Afonso, R. M.; Nunes, P. A.; Cancela, M.. "Desenvolvimento de um método de diagnóstico para detecção da infecção em moluscos bivalves". Paper presented in Feira de Inovação, 2004.
  27. RODRIGUES, PEDRO; Leite, R. B.; Afonso, R. M.; Elandalloussi, L.; Nunes, P.; Cancela, M.L.. "Two-dimensional (2D) gel electrophoresis protein analysis of Perkinsus Atlanticus in the presence of different drugs". Paper presented in Luso-Spanish workshop on the structure and function of proteins, 2003.
  28. Pinto, J. P.; Simes, D.; RODRIGUES, PEDRO; Macedo, A.; Goodfellow, B.; Williamson, M. K.; Price, P. A.; Cancela, L.. "Identification of invariant amino acid residues in BGP from fish to mammals suggests a conserved function throughout vertebrate evolution". Paper presented in 20th Conference of European comparative Endocrinologists, 2000.
  29. Macedo, A. L.; Goodfellow, B.; RODRIGUES, PEDRO; Moura, I.; Moura, J. J. G.. "Structural multidimensional NMR studies of [3Fe-4S] Ferredoxin from D. gigas". Paper presented in EUROBIC 4, 1998.
  30. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Multidimensional NMR Studies of Iron Sulfur Proteins". Paper presented in Symposium on Inorganic Biochemistry and Regulatory Mechanisms of Iron Metabolism, 1998.
  31. Macedo, A. L.; Goodfellow, B. J.; RODRIGUES, PEDRO; Moura, I.; Moura, J. J. G.. "NMR Studies of the [3Fe-4S] Ferredoxin from D.gigas". Paper presented in Symposium on Inorganic Biochemistry and Regulatory Mechanisms of Iron Metabolism, 1998.
  32. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Nuclear Magnetic Resonance Studies of Iron-Sulfur Proteins". Paper presented in Gordon Conference on Magnetic Resonance in Biology & Medicine, 1998.
  33. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Bacterial Ferredoxins – Structural Information of the Iron-Sulfur Clusters Based on 1D and 2D 1H-NMR Studies". Paper presented in ICBIC 8 – Eighth International Conference on Bioinorganic Chemistry, 1997.
  34. Macedo, A. L.; RODRIGUES, PEDRO; Wray, V.; Moura, I.; Moura, J. J. G.. "Structural Studies on a Ferredoxin by NMR Spectrscopy". Paper presented in Chemistry of Metals in Biological Systems, 1997.
  35. Macedo, A. L.; RODRIGUES, PEDRO; Moura, I.; Moura, J. J. G.. "The Use of Isotropic Shifts to Probe Structural Rearrengments in a Paramagnetic System". Paper presented in Sintese, Reactividade e Estrutura em Química Inorgânica, 1997.
  36. RODRIGUES, PEDRO; Rusnak, F.; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Overexpression of the Desulfovibrio gigas ferredoxin II in E.Coli". Paper presented in Sintese, Reactividade e Estrutura em Química Inorgânica, 1997.
  37. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Structural Information on the [3Fe-4S] Cysteinyl Cluster Ligands of Desulfovibrio gigas Ferredoxin II". Paper presented in Biocoordination Chemistry And Framework Structures., 1996.
  38. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "The Use Of Isotropic Shifts To Probe Structural Rearrangments Studies on the opening of a Dissulfide Bridge on a Ferredoxin". Paper presented in 3rd European Conference on Bio-inorganic Chemistry, EUROBIC 3, 1996.
  39. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Bacterial Ferredoxins - Structural Aspects 1D and 2D 1H - NMR studies in Paramagnetic Systems". Paper presented in 1st Portuguese-Spanish Biophysics Congress, 1995.
  40. RODRIGUES, PEDRO; Macedo, A.L.; Moura, I.; Moura, J. J. G.. "1D and 2D NMR studies on Ferredoxin II from Desulfovibrio gigas". Paper presented in Inorganic Biochemistry Summer Workshop, 1995.
  41. RODRIGUES, PEDRO; Macedo, A. L.; Moura, I.; Moura, J. J. G.. "Multidimensional NMR Studies on Desulfovibrio gigas Ferredoxin II". Paper presented in Chemistry of Metals in Biological Systems, 1995.
Edited book
  1. de Almeida, André; Eckersall, David; Bencurova, Elena; Dolinska, Saskia; Mlynarcik, Patrik; Vincova, Miroslava. Farm animal proteomics 2013. Wageningen, Netherlands: Wageningen Academic publishers. 2013.
  2. A. Rodrigues, Tiago; Eckersall, David; Ana Rodrigues Costa. Farm Animal proteomics. Wageningen, Netherlands: Wageningen Academic Publishers. 2012.
    Editor
Encyclopedia entry
  1. RODRIGUES, PEDRO. "Fish Pathology". , 2020.
    Published
Exhibition catalog
  1. RODRIGUES, PEDRO. Desenvolvimento de um peixe de aquacultura com reduzido teor alergénico. 2020.
  2. RODRIGUES, PEDRO. Desenvolvimento do peixe de aquacultura como alimento funcional: Fortificação em nutrientes naturais e redução do potencial alergénico. 2016.
Journal article
  1. Raposo de Magalhães, Cláudia; Sandoval, Kenneth; Kagan, Ferenc; McCormack, Grace; Schrama, Denise; Carrilho, Raquel; Farinha, Ana Paula; Cerqueira, Marco; Rodrigues, Pedro M.. "Transcriptomic changes behind Sparus aurata hepatic response to different aquaculture challenges: An RNA-seq study and multiomics integration". PLOS ONE 19 3 (2024): e0300472. http://dx.doi.org/10.1371/journal.pone.0300472.
    10.1371/journal.pone.0300472
  2. Márcio Moreira; Benjamín Costas; Pedro M. Rodrigues; Cátia Lourenço-Marques; Rui Sousa; Denise Schrama; Cláudia Raposo de Magalhães; Ana Paula Farinha; Florbela Soares. "Amyloodiniosis in aquaculture: A review". Reviews in Aquaculture (2023): https://doi.org/10.1111/raq.12883.
    10.1111/raq.12883
  3. Raposo de Magalhães, Cláudia; Farinha, Ana Paula; Carrilho, Raquel; Schrama, Denise; Cerqueira, Marco; Rodrigues, Pedro M.. "A new window into fish welfare: A proteomic discovery study of stress biomarkers in the skin mucus of gilthead seabream (Sparus aurata)". Journal of Proteomics 281 (2023): 104904. http://dx.doi.org/10.1016/j.jprot.2023.104904.
    10.1016/j.jprot.2023.104904
  4. Cláudia Raposo de Magalhães; Ana Paula Farinha; Gavin Blackburn; Phillip D. Whitfield; Raquel Carrilho; Denise Schrama; Marco Cerqueira; Pedro M. Rodrigues. "Gilthead Seabream Liver Integrative Proteomics and Metabolomics Analysis Reveals Regulation by Different Prosurvival Pathways in the Metabolic Adaptation to Stress". International Journal of Molecular Sciences (2022): https://doi.org/10.3390/ijms232315395.
    10.3390/ijms232315395
  5. Rodrigues, PM; Denise Schrama; Pedro Miguel Leal Rodrigues; Schrama, Denise; Rodrigues, Pedro Miguel Leal. "Modulação da alergenicidade em peixes de cultivo". STUDIES IN ENVIRONMENTAL AND ANIMAL SCIENCES 3 4 (2022): 1660-1673. http://dx.doi.org/10.54020/seasv3n4-002.
    10.54020/seasv3n4-002
  6. Denise Schrama; Cláudia Raposo de Magalhães; Marco Cerqueira; Raquel Carrilho; Dominique Revets; Annette Kuehn; Sofia Engrola; Pedro M. Rodrigues. "Fish Processing and Digestion Affect Parvalbumins Detectability in Gilthead Seabream and European Seabass". Animals (2022): https://doi.org/10.3390/ani12213022.
    10.3390/ani12213022
  7. Rodrigues, PM; Denise Schrama; Rebecca Czolk; Cláudia Raposo de Magalhães; Annette Kuehn; Pedro M. Rodrigues. "Fish Allergenicity Modulation Using Tailored Enriched Diets—Where Are We?". Frontiers in Physiology 13 (2022): http://dx.doi.org/10.3389/fphys.2022.897168.
    10.3389/fphys.2022.897168
  8. "Effect of creatine and EDTA supplemented diets on European seabass (Dicentrarchus labrax) allergenicity, fish muscle quality and omics fingerprint". Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 41 (2022): 100941-100941. http://dx.doi.org/10.1016/j.cbd.2021.100941.
    10.1016/j.cbd.2021.100941
  9. Raposo de Magalhães, Cláudia; Schrama, Denise; Nakharuthai, Chatsirin; Boonanuntanasarn, Surintorn; Revets, Dominique; Planchon, Sébastien; Kuehn, Annette; et al. "Metabolic Plasticity of Gilthead Seabream Under Different Stressors: Analysis of the Stress Responsive Hepatic Proteome and Gene Expression". Frontiers in Marine Science 8 (2021): http://dx.doi.org/10.3389/fmars.2021.676189.
    Published • 10.3389/fmars.2021.676189
  10. Almeida, André M.; Ali, Syed Azmal; Ceciliani, Fabrizio; Eckersall, P. David; Hernandez-Castellano, Lorenzo E.; Han, Rongwei; Hodnik, Jaka J.; et al. "Domestic animal proteomics in the 21st century: A global retrospective and viewpoint analysis". Journal of Proteomics 241 (2021): 104220. http://dx.doi.org/10.1016/j.jprot.2021.104220.
    Published • 10.1016/j.jprot.2021.104220
  11. RODRIGUES, PEDRO. "Evaluating the impact of methionine-enriched diets in the liver of European seabass through label-free shotgun proteomics". Journal of Proteomics 232 (2021): 104047-104047. http://dx.doi.org/10.1016/j.jprot.2020.104047.
    Published • 10.1016/j.jprot.2020.104047
  12. RODRIGUES, PEDRO. "Data on European seabass fed with methionine-enriched diets obtained through label free shotgun proteomics". Data in Brief 34 (2021): 106675-106675. http://dx.doi.org/10.1016/j.dib.2020.106675.
    Published • 10.1016/j.dib.2020.106675
  13. RODRIGUES, PEDRO. "New ways to assess stress in fish are urgently needed in aquaculture". Research Outreach 120 (2021): 46-49. https://researchoutreach.org/articles/new-ways-assess-stress-fish-urgently-needed-aquaculture/.
    Open access • Published
  14. Márcio Moreira; Denise Schrama; Ana Paula Farinha; Marco Cerqueira; Cláudia Raposo de Magalhães; Raquel Carrilho; Pedro Rodrigues. "Fish Pathology Research and Diagnosis in Aquaculture of Farmed Fish; a Proteomics Perspective". Animals 11 1 (2021): 125-125. https://doi.org/10.3390/ani11010125.
    Published • 10.3390/ani11010125
  15. Joana Costa; Caterina Villa; Kitty Verhoeckx; Tanja Cirkovic-Velickovic; Denise Schrama; Paola Roncada; Pedro M. Rodrigues; et al. "Are Physicochemical Properties Shaping the Allergenic Potency of Animal Allergens?". Clinical Reviews in Allergy & Immunology (2021): https://doi.org/10.1007/s12016-020-08826-1.
    10.1007/s12016-020-08826-1
  16. RODRIGUES, PEDRO; Raposo de Magalhães, Cláudia; Schrama, Denise; Farinha, Ana Paula; Revets, Dominique; Kuehn, Annette; Planchon, Sébastien; Cerqueira, Marco. "Protein changes as robust signatures of fish chronic stress: a proteomics approach to fish welfare research". BMC Genomics (2020): http://dx.doi.org/10.1186/s12864-020-6728-4.
    Published • 10.1186/s12864-020-6728-4
  17. RODRIGUES, PEDRO. "Mid-infrared spectroscopic screening of metabolic alterations in stress-exposed gilthead seabream (Sparus aurata)". Scientific Reports 10 1 (2020): http://dx.doi.org/10.1038/s41598-020-73338-z.
    10.1038/s41598-020-73338-z
  18. Luis Nobre Pereira; Júlio Mendes; Denise Schrama; Pedro M. L. Rodrigues; Pereira, Luis Nobre; Mendes, Júlio Costa; RODRIGUES, PEDRO; Schrama, Denise. "Consumers’ Willingness to Pay for Fish with a Low Allergenic Potential". Journal of International Food & Agribusiness Marketing (2020): https://doi.org/10.1080/08974438.2020.1844108.
    Published • 10.1080/08974438.2020.1844108
  19. RODRIGUES, PEDRO. "Are Physicochemical Properties Shaping the Allergenic Potency of Plant Allergens?". Clinical Reviews in Allergy & Immunology (2020): http://dx.doi.org/10.1007/s12016-020-08810-9.
    10.1007/s12016-020-08810-9
  20. Chatsirin Nakharuthai; Pedro M. Rodrigues; Denise Schrama; Suksan Kumkhong; Surintorn Boonanuntanasarn. "Effects of Different Dietary Vegetable Lipid Sources on Health Status in Nile Tilapia (Oreochromis niloticus): Haematological Indices, Immune Response Parameters and Plasma Proteome". Animals 10 8 (2020): 1377-1377. https://doi.org/10.3390/ani10081377.
    10.3390/ani10081377
  21. RODRIGUES, PEDRO; Cerqueira, Marco; Schrama, Denise; Silva, Tomé; Colen, Rita; Engrola, Sofia; Conceição, Luis; Farinha, Ana Paula. "How tryptophan levels in plant-based aquafeeds affect fish physiology, metabolism and proteome". Journal of Proteomics (2020): http://dx.doi.org/10.1016/j.jprot.2020.103782.
    Published • 10.1016/j.jprot.2020.103782
  22. De Magalhães, Cláudia Raposo; Schrama, Denise; Fonseca, Flávio; Kuehn, Annette; Morisset, Martine; Ferreira, Sara R.; Gonçalves, Amparo; Rodrigues, Pedro M.. "Effect of EDTA enriched diets on farmed fish allergenicity and muscle quality; a proteomics approach". Food Chemistry 305 (2020): 125508. http://dx.doi.org/10.1016/j.foodchem.2019.125508.
    Published • 10.1016/j.foodchem.2019.125508
  23. Klueber, Julia; Schrama, Denise; Rodrigues, Pedro; Dickel, Heinrich; Kuehn, Annette. "Fish Allergy Management: From Component-Resolved Diagnosis to Unmet Diagnostic Needs". Current Treatment Options in Allergy 6 4 (2019): 322-337. http://dx.doi.org/10.1007/s40521-019-00235-w.
    Published • 10.1007/s40521-019-00235-w
  24. Ramos-Pinto, Lourenço; Lopes, Graciliana; Sousa, Vera; Castro, L. Filipe C.; Schrama, Denise; Rodrigues, Pedro; Valente, Luísa M. P.. "Dietary Creatine Supplementation in Gilthead Seabream (Sparus aurata) Increases Dorsal Muscle Area and the Expression of myod1 and capn1 Genes". Frontiers in Endocrinology 10 (2019): http://dx.doi.org/10.3389/fendo.2019.00161.
    10.3389/fendo.2019.00161
  25. Schrama, Denise; Cerqueira, Marco; Raposo, Claúdia S.; Rosa da Costa, Ana M.; Wulff, Tune; Gonçalves, Amparo; Camacho, Carolina; et al. "Dietary Creatine Supplementation in Gilthead Seabream (Sparus aurata): Comparative Proteomics Analysis on Fish Allergens, Muscle Quality, and Liver". Frontiers in Physiology 9 (2018): http://dx.doi.org/10.3389/fphys.2018.01844.
    10.3389/fphys.2018.01844
  26. Cláudia Sofia Ferreira Raposo de Magalhães; Marco Alexandre Cavaco Cerqueira; Denise Schrama; Márcio Júlio Vicente Moreira; Surintorn Boonanuntanasarn; Pedro Miguel Leal Rodrigues. "A Proteomics and other Omics approach in the context of farmed fish welfare and biomarker discovery". Reviews in Aquaculture (2018): https://doi.org/10.1111/raq.12308.
    10.1111/raq.12308
  27. Mazzucchelli, G.; Holzhauser, T.; Cirkovic Velickovic, T.; Diaz-Perales, A.; Molina, E.; Roncada, P.; Rodrigues, P.; Verhoeckx, K.; Hoffmann-Sommergruber, K.. "Current (Food) Allergenic Risk Assessment: Is It Fit for Novel Foods? Status Quo and Identification of Gaps". Molecular Nutrition and Food Research 62 1 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85040358214&partnerID=MN8TOARS.
    10.1002/mnfr.201700278
  28. Boonanuntanasarn, S.; Nakharuthai, C.; Schrama, D.; Duangkaew, R.; Rodrigues, P.M.. "Effects of dietary lipid sources on hepatic nutritive contents, fatty acid composition and proteome of Nile tilapia (Oreochromis niloticus)". Journal of Proteomics (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85054151075&partnerID=MN8TOARS.
    10.1016/j.jprot.2018.09.003
  29. M Moreira; D Schrama; F Soares; T Wulff; P Pousão-Ferreira; P Rodrigues. "Physiological responses of reared sea bream (Sparus aurata Linnaeus, 1758) to an Amyloodinium ocellatum outbreak". Journal of Fish Diseases (2017): https://doi.org/10.1111/jfd.12623.
    10.1111/jfd.12623
  30. Macedo, J. A.; Schrama, D.; Duarte, I.; Tavares, E.; Renaut, J.; Futschik, M. E.; Rodrigues, P. M.; Melo, E. P.. "Membrane-enriched proteome changes and prion protein expression during neural differentiation and in neuroblastoma cells". BMC Genomics 18 1 (2017): http://dx.doi.org/10.1186/s12864-017-3694-6.
    10.1186/s12864-017-3694-6
  31. Schrama, D.; Richard, N.; Silva, T.S.; Figueiredo, F.A.; Conceição, L.E.C.; Burchmore, R.; Eckersall, D.; Rodrigues, P.M.L.. "Enhanced dietary formulation to mitigate winter thermal stress in gilthead sea bream (Sparus aurata): a 2D-DIGE plasma proteome study". Fish Physiology and Biochemistry 43 2 (2017): 603-617. http://www.scopus.com/inward/record.url?eid=2-s2.0-84996773873&partnerID=MN8TOARS.
    10.1007/s10695-016-0315-2
  32. Rodrigues, Pedro M L; Schrama, Denise; Raposo, Claudia. "Modulation of fish allergenicity towards the production of a low allergen farmed fish: A proteomics approach". Journal of Proteomics & Bioinformatics 10 05 (2017): http://dx.doi.org/10.4172/0974-276x-c1-098.
    10.4172/0974-276x-c1-098
  33. Richard N; Silva TS; Wulff T; Schrama D; Dias JP; Rodrigues PM; Conceição LE. "Nutritional mitigation of winter thermal stress in gilthead seabream: Associated metabolic pathways and potential indicators of nutritional state". (2016): http://europepmc.org/abstract/med/27126605.
    10.1016/j.jprot.2016.04.037
  34. Marco-Ramell A; de Almeida AM; Cristobal S; Rodrigues P; Roncada P; Bassols A; Marco-Ramell, A.; et al. "Proteomics and the search for welfare and stress biomarkers in animal production in the one-health context". Molecular BioSystems 12 7 (2016): 2024-2035. http://europepmc.org/abstract/med/26931796.
    10.1039/c5mb00788g
  35. Piras C; Roncada P; Rodrigues PM; Bonizzi L; Soggiu A. "Proteomics in food: Quality, safety, microbes, and allergens". (2016): http://europepmc.org/abstract/med/26603968.
    10.1002/pmic.201500369
  36. RODRIGUES, PEDRO. "Metabolic profiling of Gilthead Seabream (Sparus aurata) liver to track interactions between dietary factors and seasonal temperature variations". (2014):
    10.7717/peerj.527
  37. Silva, T.S.; Richard, N.; Dias, J.P.; Rodrigues, P.M.. "Data visualization and feature selection methods in gel-based proteomics". Current Protein and Peptide Science 15 1 (2014): 4-22. http://www.scopus.com/inward/record.url?eid=2-s2.0-84897546273&partnerID=MN8TOARS.
    10.2174/1389203715666140221112334
  38. Almeida, A.M.; Bassols, A.; Bendixen, E.; Bhide, M.; Ceciliani, F.; Cristobal, S.; Eckersall, P.D.; et al. "Animal board invited review: Advances in proteomics for animal and food sciences". Animal 9 1 (2014): 1-17. http://www.scopus.com/inward/record.url?eid=2-s2.0-84919461977&partnerID=MN8TOARS.
    10.1017/S1751731114002602
  39. Matos, E.; Silva, T.S.; Wulff, T.; Valente, L.M.P.; Sousa, V.; Sampaio, E.; Gonçalves, A.; et al. "Influence of supplemental maslinic acid (olive-derived triterpene) on the post-mortem muscle properties and quality traits of gilthead seabream". Aquaculture 396-399 (2013): 146-155. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875921389&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2013.02.044
  40. Morais, S.; Silva, T.; Cordeiro, O.; Rodrigues, P.; Guy, D.R.; Bron, J.E.; Taggart, J.B.; Bell, J.G.; Tocher, D.R.. "Effects of genotype and dietary fish oil replacement with vegetable oil on the intestinal transcriptome and proteome of Atlantic salmon (Salmo salar)". BMC Genomics 13 1 (2012): http://www.scopus.com/inward/record.url?eid=2-s2.0-84865627969&partnerID=MN8TOARS.
    10.1186/1471-2164-13-448
  41. Silva, T.S.; Cordeiro, O.D.; Matos, E.D.; Wulff, T.; Dias, J.P.; Jessen, F.; Rodrigues, P.M.. "Effects of preslaughter stress levels on the post-mortem sarcoplasmic proteomic profile of gilthead seabream muscle". Journal of Agricultural and Food Chemistry 60 37 (2012): 9443-9453. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866411730&partnerID=MN8TOARS.
    10.1021/jf301766e
  42. de Vareilles, M.; Conceição, L.E.C.; Gómez-Requeni, P.; Kousoulaki, K.; Richard, N.; Rodrigues, P.M.; Fladmark, K.E.; Rønnestad, I.. "Dietary Lysine Imbalance Affects Muscle Proteome in Zebrafish (Danio rerio): A Comparative 2D-DIGE Study". Marine Biotechnology 14 5 (2012): 643-654. http://www.scopus.com/inward/record.url?eid=2-s2.0-84865431642&partnerID=MN8TOARS.
    10.1007/s10126-012-9462-3
  43. Silva, T.S.; Matos, E.; Cordeiro, O.D.; Colen, R.; Wulff, T.; Sampaio, E.; Sousa, V.; et al. "Dietary tools to modulate glycogen storage in gilthead seabream muscle: Glycerol supplementation". Journal of Agricultural and Food Chemistry 60 42 (2012): 10613-10624. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867812909&partnerID=MN8TOARS.
    10.1021/jf3023244
  44. Cordeiro, O.D.; Silva, T.S.; Alves, R.N.; Costas, B.; Wulff, T.; Richard, N.; de Vareilles, M.; Conceição, L.E.C.; Rodrigues, P.M.. "Changes in Liver Proteome Expression of Senegalese Sole (Solea senegalensis) in Response to Repeated Handling Stress". Marine Biotechnology 14 6 (2012): 714-729. http://www.scopus.com/inward/record.url?eid=2-s2.0-84869110210&partnerID=MN8TOARS.
    10.1007/s10126-012-9437-4
  45. de Vareilles, M.; Richard, N.; Gavaia, P.J.; Silva, T.S.; Cordeiro, O.; Guerreiro, I.; Yúfera, M.; et al. "Impact of dietary protein hydrolysates on skeleton quality and proteome in Diplodus sargus larvae". Journal of Applied Ichthyology 28 3 (2012): 477-487. http://www.scopus.com/inward/record.url?eid=2-s2.0-84861324519&partnerID=MN8TOARS.
    10.1111/j.1439-0426.2012.01986.x
  46. Rodrigues, P.M.; Silva, T.S.; Dias, J.; Jessen, F.. "PROTEOMICS in aquaculture: Applications and trends". Journal of Proteomics 75 14 (2012): 4325-4345. http://www.scopus.com/inward/record.url?eid=2-s2.0-84863821112&partnerID=MN8TOARS.
    10.1016/j.jprot.2012.03.042
  47. RODRIGUES, PEDRO; Richard, Nadége; de Vareilles, Mahaut; Silva, Tomé; Conceição, Luís. "Proteomics as a tool to develop molecular indicators of nutritional condition in farmed gilthead seabream". Journal of Proteomics & Bioinformatics (2012):
    Published
  48. RODRIGUES, PEDRO. "Comparative protein structure modeling of genes and genomes". Journal of Proteomics & Bioinformatics (2012): http://dx.doi.org/10.4172/0974-276x.s1.064.
    10.4172/0974-276x.s1.064
  49. Silva, T.S.; Cordeiro, O.; Richard, N.; Conceição, L.E.C.; Rodrigues, P.M.. "Changes in the soluble bone proteome of reared white seabream (Diplodus sargus) with skeletal deformities". Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics 6 1 (2011): 82-91. http://www.scopus.com/inward/record.url?eid=2-s2.0-79251602900&partnerID=MN8TOARS.
    10.1016/j.cbd.2010.03.008
  50. Alves, R.N.; Cordeiro, O.; Silva, T.S.; Richard, N.; de Vareilles, M.; Marino, G.; Di Marco, P.; Rodrigues, P.M.; Conceição, L.E.C.. "Metabolic molecular indicators of chronic stress in gilthead seabream (Sparus aurata) using comparative proteomics". Aquaculture 299 1-4 (2010): 57-66. http://www.scopus.com/inward/record.url?eid=2-s2.0-73749084022&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2009.11.014
  51. Silva, T.S.; Cordeiro, O.; Jessen, F.; Dias, J.; Rodrigues, P.M.. "Reproducibility of a fractionation procedure for fish muscle proteomics". American Biotechnology Laboratory 28 4 (2010): 9-13. http://www.scopus.com/inward/record.url?eid=2-s2.0-78650074005&partnerID=MN8TOARS.
  52. Elandalloussi, L.M.; Leite, R.B.; Rodrigues, P.M.; Afonso, R.; Cancela, M.L.. "Effect of the herbicide Roundup® on Perkinsus olseni in vitro proliferation and in vivo survival when infecting a permissive host, the clam Ruditapes decussatus". Bulletin of Environmental Contamination and Toxicology 80 6 (2008): 512-515. http://www.scopus.com/inward/record.url?eid=2-s2.0-46249130791&partnerID=MN8TOARS.
    10.1007/s00128-008-9412-y
  53. Rodrigues, P.M.; Macedo, A.L.; Goodfellow, B.J.; Moura, I.; Moura, J.J.G.. "Desulfovibrio gigas ferredoxin II: Redox structural modulation of the [3Fe-4S] cluster". Journal of Biological Inorganic Chemistry 11 3 (2006): 307-315. http://www.scopus.com/inward/record.url?eid=2-s2.0-33645524493&partnerID=MN8TOARS.
    10.1007/s00775-005-0077-2
  54. Elandalloussi, L.M.; Leite, R.B.; Rodrigues, P.M.; Afonso, R.; Nunes, P.A.; Cancela, M.L.. "Effect of antiprotozoal drugs on the proliferation of the bivalve parasite Perkinsus olseni". Aquaculture 243 1-4 (2005): 9-17. http://www.scopus.com/inward/record.url?eid=2-s2.0-10644265408&partnerID=MN8TOARS.
    10.1016/j.aquaculture.2004.09.038
  55. Elandalloussi, L.M.; Rodrigues, P.M.; Afonso, R.; Leite, R.B.; Nunes, P.A.; Cancela, M.L.. "Shikimate and folate pathways in the protozoan parasite, Perkinsus olseni". Molecular and Biochemical Parasitology 142 1 (2005): 106-109. http://www.scopus.com/inward/record.url?eid=2-s2.0-19344373699&partnerID=MN8TOARS.
    10.1016/j.molbiopara.2005.03.014
  56. Rodrigues, P.M.; Moura, I.; MacEdo, A.L.; Moura, J.J.G.. "Spectroscopic characterization of a novel 2 x [4Fe-4S] ferredoxin isolated from Desulfovibrio desulfuricans ATCC 27774". Inorganica Chimica Acta 356 (2003): 215-221. http://www.scopus.com/inward/record.url?eid=2-s2.0-1042275916&partnerID=MN8TOARS.
    10.1016/S0020-1693(03)00472-9
  57. Leite, R. M.; RODRIGUES, PEDRO; Elandalloussi, L.M; Afonso, R.M.; Nunes, P.A.; Cancela, M.L.. "Perkinsus Atlanticus – Desenvolvimento de um método de diagnóstico para detecção de infecção em moluscos bivalves". Boletim de Biotecnologia 75 (2003): 8-11.
  58. Rodrigues, P.; Graça, F.; Macedo, A.L.; Moura, I.; Moura, J.J.G.. "Characterization of recombinant Desulfovibrio gigas ferredoxin". Biochemical and Biophysical Research Communications 289 2 (2001): 630-633. http://www.scopus.com/inward/record.url?eid=2-s2.0-0035976781&partnerID=MN8TOARS.
    10.1006/bbrc.2001.6016
  59. Battistuzzi, G.; D'Onofrio, M.; Borsari, M.; Sola, M.; Macedo, A.L.; Moura, J.J.G.; Rodrigues, P.. "Redox thermodynamics of low-potential iron-sulfur proteins". Journal of Biological Inorganic Chemistry 5 6 (2000): 748-760. http://www.scopus.com/inward/record.url?eid=2-s2.0-0033748454&partnerID=MN8TOARS.
    10.1007/s007750000164
  60. Goodfellow, B.J.; Macedo, A.L.; Rodrigues, P.; Moura, I.; Wray, V.; Moura, J.J.G.. "The solution structure of a [3Fe-4S] ferredoxin: Oxidised ferredoxin II from Desulfovibrio gigas". Journal of Biological Inorganic Chemistry 4 4 (1999): 421-430. http://www.scopus.com/inward/record.url?eid=2-s2.0-0032853630&partnerID=MN8TOARS.
    10.1007/s007750050328
  61. Macedo, A.L.; Rodrigues, P.; Goodfellow, B.J.. "The 3Fe containing ferredoxin from Desulfovibrio gigas: An NMR characterization of the oxidised and intermediate states". Coordination Chemistry Reviews 190-192 (1999): 871-881. http://www.scopus.com/inward/record.url?eid=2-s2.0-0033303284&partnerID=MN8TOARS.
    10.1016/S0010-8545(99)00126-5
Magazine article
  1. RODRIGUES, PEDRO; de Magalhães, Cláudia Raposo. "New ways to assess stress in fish are urgently needed in aquaculture", Research Outreach, 2021, https://researchoutreach.org/articles/new-ways-assess-stress-fish-urgently-needed-aquaculture/.
Thesis / Dissertation
  1. RODRIGUES, PEDRO. "Cláudia Raposo de Magalhães. Effect of EDTA enriched diets on farmed fish allergenicity; a proteomics approach". Master, Universidade do Algarve Faculdade de Ciências e Tecnologia, 2016. http://hdl.handle.net/10400.1/9898.
  2. RODRIGUES, PEDRO. "André Filipe Afonso de Sousa Fonseca. Aplicações Biomédicas da Imagiologia de espectrometria de massa – MALDI Imaging". Degree, Universidade do Algarve, 2016.
  3. RODRIGUES, PEDRO. "Márcio Julio Moreira. Contamination of farmed gilthead sea bream (Sparus aurata, Linnaeus, 1758) by the parasite Amyloodinium ocellatum: a proteomic approach". Master, Universidade do Algarve Faculdade de Ciências e Tecnologia, 2015. http://hdl.handle.net/10400.1/7639.
  4. RODRIGUES, PEDRO. "Lourenço de Oliveira Coelho e Ramos Pinto. Effects of dietary creatine supplementation in gilthead seabream (Sparus aurata) muscle growth". Master, Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, 2015. https://sigarra.up.pt/faup/pt/pub_geral.pub_view?pi_pub_base_id=36221&pi_pub_r1_id=.
  5. RODRIGUES, PEDRO. "Ricardo Moreira de Carvalho. Deteção e modulação de agentes alergénios em peixes de aquaculture; uma perspetiva proteómica". Degree, Universidade do Algarve, 2015.
  6. RODRIGUES, PEDRO. "Tomé Silva. Using proteomic technologies to understand the impact of stress and nutritional factors on fish metabolism, welfare and quality". PhD, Universidade do Algarve Faculdade de Ciências e Tecnologia, 2013. https://sapientia.ualg.pt/handle/10400.1/6673.
  7. RODRIGUES, PEDRO. "Mahaut de Vareilles. Dietary nitrogen utilisation and protein expression in fish". PhD, Universidade do Algarve Faculdade de Ciências e Tecnologia, 2013. https://sapientia.ualg.pt/handle/10400.1/6682.
  8. RODRIGUES, PEDRO. "Bruno Tavares. Enzymatic and Metabolic quality parameters evaluation in Sole (Solea senegalensis).". Degree, Universidade do Algarve, 2013.
  9. RODRIGUES, PEDRO. "Ana Mestre. Proteomics role in disease biomarker discovery.". Degree, Universidade do Algarve, 2010.
  10. RODRIGUES, PEDRO. "José Eduardo Rosa. Proteomics and Biomarkers in Neurological diseases.". Degree, Universidade do Algarve, 2009.
  11. RODRIGUES, PEDRO. "Mauro Sousa,. Study of the proteome associated to degenerative pathologies of cartilage.". Degree, Universidade do Algarve, 2009.
  12. RODRIGUES, PEDRO. "Ricardo Alves. Identificação de indicadores moleculares de bem-estar durante o cultivo de dourada (Sparus aurata, Linnaeus 1758), utilizando técnicas de proteómica". Master, Universidade do Algarve Faculdade de Ciências e Tecnologia, 2008. https://sapientia.ualg.pt/handle/10400.1/666.
  13. RODRIGUES, PEDRO. "Tomé Santos Silva. Differential expression analysis from sea bream (Diplodus sargus) skeletal proteins in normal and deformed fish.". Degree, Universidade do Algarve, 2007.
  14. RODRIGUES, PEDRO. "Estudos estruturais em ferredoxinas por ressonância magnética nuclear". PhD, Universidade Nova de Lisboa, 1999. https://run.unl.pt/handle/10362/4450.
Website
  1. RODRIGUES, PEDRO. Desenvolvimento de um peixe de aquacultura com reduzido teor alergénico. 2018. http://allyfish.com/.
  2. RODRIGUES, PEDRO. Estabelecimento de biomarcadores de bem-estar em peixe de aquacultura através de uma abordagem proteómica. 2018. http://welfish.com/.

Artistic / Performance

Video recording
  1. RODRIGUES, PEDRO; Science Animated (Producer). 2020. Can Aquaculture help us produce farmed fish with reduced allergenic potential?.
  2. RODRIGUES, PEDRO; SCIANI (Producer). 2020. Elaboração de um vídeo didático e pedagógico distribuído internacionalmente e que visa informar acerca da temática do projeto WELFISH.
  3. RODRIGUES, PEDRO. 2019. Desenvolvimento de um peixe de aquacultura com reduzido teor alergénico.

Intellectual property

Provisional application for patent
  1. 2019. "FISH FEED SPECIFIC FORMULATION TO PRODUCE A HYPOALLERGENIC FARMED FISH".
    Disclosed
  2. 2019. "A MULTI-OMICS APPROACH TO DISCOVER FARMED FISH WELFARE BIOMARKERS".
    Disclosed

Other

Other output
  1. Manual didático das aulas teóricas de Proteómica em Sistemas Clínicos. 2014. RODRIGUES, PEDRO.
  2. Manual didático das aulas laboratoriais de Proteómica em Sistemas Clínicos. 2014. RODRIGUES, PEDRO.
  3. Manual didático das aulas Teórico-práticas de Química Orgânica. 2013. RODRIGUES, PEDRO.
  4. Manual didático das aulas laboratoriais de Química Orgânica. 2012. RODRIGUES, PEDRO.
  5. Manual didático das aulas laboratoriais de Estrutura e Função dos Compostos Orgânico. 2010. RODRIGUES, PEDRO.
  6. Manual didático das aulas Teórico-práticas de Química Orgânica I. 2007. RODRIGUES, PEDRO.
  7. Manual didático das aulas laboratoriais de Química Orgânica II. 2007. RODRIGUES, PEDRO.
Standard or policy
  1. Proteomics as a tool to develop molecular indicators of nutritional condition in farmed gilthead seabream. 2012. RODRIGUES, PEDRO.
    10.4172/0974-276X.S1.064
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2023/04/28 Alergias a peixe? O que sabemos. XXX Aniversário da licenciatura em Bioquímica.
SPB (Faro, Portugal)
2022/06/28 Integrative proteomics and metabolomics profiling of farmed gilthead seabream hepatic stress response. 14th International Congress on the Biology of Fish
ICBF (Montpellier, France)
2022/05/11 Proteomic profiling of farmed gilthead seabream skin mucus stress response: a biomarker discovery study. Proteo Vilamoura 2022
(Vilamoura, Portugal)
2022/02/28 The promisor role of skin mucus to screen for fish stress biomarkers: a proteomics approach Aquaculture America 2022
WAS (San Diego, United States)
2022/02/28 Thermal and nutritional strategies as alternatives to antibiotics in aquaculture. Aquaculture America 2022
WAS (San Diego, United States)
2021/10/04 In search of stress biomarkers: label-free shotgun proteomics analysis of gilthead seabream hepatic and skin mucus proteome Aquaculture Europe 2021
EAS (Funchal, Portugal)
2021/04/15 Comparative Analysis of the stress responsive hepatic proteome and gene expression: identification of stress biomarkers Aquaculture Europe 2020
EAS
2021/04/15 Mid-infrared spectroscopic screening of metabolic alterations in stress-exposed gilthead seabream (Sparus aurata) Aquaculture Europe 2020
EAS
2021/04/07 European seabass (Dicentrarchus labrax) allergenicity and fish quality after EDTA supplementation Aquaculture Europe 2021
EAS (Funchal, Portugal)
2021/03/24 Data Analysis on Farmed Fish Allergenicity EMBL conference: Visualizing Biological Data
VIZBI (Heidelberg, Germany)
2020/09/17 IgE-reactivity against gilthead seabream (Sparus aurata) World Allergy Congress 2020
(Kyoto, Japan)
2019/11 Non allergenic farmed fish. How far are we? L’Acqua 2019, Latin American & Caribbean Aquaculture
(San Jose, Costa Rica)
2019/11 Identification of welfare biomarkers in farmed gilthead sea bream: integrating multi-omics data L’Acqua 2019, Latin American & Caribbean Aquaculture
(San Jose, Costa Rica)
2019 Is Amyloodinium ocellatum a toxin-producing parasitic dinoflagellate? - a toxicological study L’Acqua 2019, Latin American & Caribbean Aquaculture
(San Jose, Costa Rica)
2018/06 Characterization and modulation of fish allergenicity towards the production of a low allergen farmed fish VII SIBIC - Iberian Congress of Ichthyology 2018
(Faro, Portugal)
2018/02/24 Fish allergenicity modulation towards the production of a low allergen fish VIII SPB clinical biochemistry workshop, allergy and environment
(Évora, Portugal)
2018/01 Fish allergenicity modulation towards the production of a low allergen farmed fish; a proteomics approach 2018 International Conference on Sustainable Global Aquaculture (ICSGA)
(Bangkok, Thailand)
2018 Modulation of fish allergenicity towards the production of a low allergen farmed fish 3rd International Conference of Imparas – Improving Allergy risk Assessment strategy for new food proteins.
(Naples, Italy)
2017/10 Effects of dietary creatine supplementation in gilthead seabream (Sparus aurata) muscle growth Aquaculture Europe 2017
(Dubrovnik, Croatia)
2017/07 A nutritional strategy to improve the gilthead seabream immune status during winter thermal stress XI Congreso de la Asociación Ibérica de Endocrinología Comparada
(Vigo, Spain)
2017/03/17 A nutritional strategy to improve the gilthead seabream immune status during winter thermal stress Aquaimprove 2017
(Porto, Portugal)
2016/09 The use of Proteomics on Fish Allergen Detection, Characterization and Modulation 15th Human Proteome Organization World Congress
(Taipé, Taiwan)
2016/09 Identification of Allergens in the Mediterranean Fish Species gilthead seabream and European seabass 2nd International Conference of Imparas – Improving Allergy risk Assessment strategy for new food proteins
(Warsaw, Poland)
2016/04/29 Desenvolvimento do peixe de aquacultura como alimento funcional: fortificação em nutrientes naturais e redução do potencial alergènico X Seminário Aquícula
(Setúbal, Portugal)
2015 Use of creatine supplementation in European seabass to modulate parvalbumin expression Improving Allergy Risk Assessment Strategy for New Food Proteins; Imparas 2015 annual meeting
(Belgrade, Serbia)
2015 Contribute of aquaculture in human food; Fish allergenicity modulation Blue week Lisbon 2015
(Lisboa, Portugal)
2015 Two dimensional difference gel electrophoresis (2D-DIGE) to identify molecular mechanisms involved in desiccation-tolerance in intertidal brown algae 6th European Phycological Congress (EPC6)
(Londres, United Kingdom)
2014 Membrane proteome and prion protein profiling during neural differentiation of stem cells 3rd Iberian congress on prions 2014
(Zaragoza, Spain)
2014 Supplemented diets for allergenic modulation in European seabass Farm animal proteomics 2014 annual meeting
(Milano, Italy)
2014 Gilthead seabream performance may be improved using a fortified diet during winter Aquaculture Europe 2014
(San Sebastian, Spain)
2014 Nutrition to help seabream coping with winter termal stress: towards the development of molecular indicators of metabolic status Aquaculture Europe 2014
(San Sebastian, Spain)
2014 Proteomics as a tool to monitor quality and allergenicity of farmed fish International congress on environmental health (ICEH)
(Porto, Portugal)
2014 Development of a high performance diet for gilthead seabream during the winter period; bringing omics to the industry International Meeting on Marine research 2014.
(Peniche, Portugal)
2014 Farmed fish quality and welfare monitoring using proteomics EAAP 2014 – 65th annual meeting of the European Federation of Animal Sciences
(Copenhagen, Denmark)
2014 Integrated metabolic, proteomic and transcriptomic profiling of gilthead seabream liver to track interactions between dietary factors and seasonal temperature variations 16th International Symposium on Fish Nutrition and Feeding (ISFNF XVI)
(Cairns, Australia)
2014 Evaluation of metabolic dysfunctions caused by winter thermal stress in gilthead seabream through a 2D proteomic approach 16th International Symposium on Fish Nutrition and Feeding (ISFNF XVI)
(Cairns, Australia)
2013 Biomarkers of Winter disease in gilthead seabream: a proteomics approach Farm animal proteomics 2013 annual meeting
(kosice, Slovakia)
2012 A high quality protein diet reduces metabolic effects of chronic stress in Senegalese sole (Solea senegalensis) juveniles XV International Symposium on Fish Nutrition and Feeding
(Molde, Norway)
2012 Dietary tools to modulate glycogen storage in fish muscle: glycerol supplementation XV International Symposium on Fish Nutrition and Feeding
(Molde, Norway)
2012 Desarrollo de un pienso para la enfermedad de inverno en la dorada Jornadas de Aquacultura de Cartaya
(Cartaya, Spain)
2012 Assesing the effect of dietary protein content on the metabolic response of Senegalese sole exposed to handling stress through a proteomics approach VII ItPA Annual Congress
(Viterbo, Italy)
2012 Proteomics in Aquaculture Workshop on Proteomics in Biology
Universidade do Algarve (Faro, Portugal)
2012 Assessing fish quality in Aquaculture: A proteomics approach Farm Animal Proteomics Spring Meeting 2012
(Vilamoura, Portugal)
2012 Effect of a dietary supplementation of glycerol and maslinic acid on the muscle proteome of gilthead seabream (Sparus aurata) Proteomics Forum
(Berlin, Germany)
2012 Impact of dietary protein hydrolysates content on skeleton quality and proteome expression in white seabream (Diplodus sargus) larvae Interdisciplinary Approaches in Fish Skeletal Biology
(Tavira, Portugal)
2011 Dietary tools to modulate glycogen storage in fish muscle: a proteomics assessment 2nd International Symposium Genomics in Aquaculture
(Greece)
2011 How does an increased availability in dietary indispensable amino acids affect liver proteome expression of Senegalese sole exposed to handling stress 2nd International Symposium Genomics in Aquaculture
(Greece)
2011 Growth and skeletal muscle proteome of juvenile zebrafish are affected by low dietary lysine 2nd International Symposium Genomics in Aquaculture
(Greece)
2010/10 Post-mortem sarcoplasmic proteomic profile of gilthead seabream is affected by pre-slaughter stress levels Aquaculture Europe 2010 Conference
(Porto, Portugal)

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2021/11 - Current Thermal and nutritional strategies as alternatives to antibiotics in aquaculture
Co-supervisor
Universidade do Algarve, Portugal
2017/09 - Current Mechanisms of infection by the parasitic dinoflagellate Amyloodinium ocellatum, and physiological responses to infection in different marine fish species
Co-supervisor of Márcio Moreira
Universidade do Algarve, Portugal
2019/02 - 2023/09 Establishment of farmed fish welfare biomarkers; a multi-omics approach
Supervisor of Cláudia Raposo de Magalhães
Universidade do Algarve, Portugal
2019/01 - 2023/05 Characterization and modulation of fish allergenicity towards the production of a low allergen farmed fish
Supervisor of Denise Schrama
Universidade do Algarve, Portugal
2017/11 - 2021/11 Estabelecimento de biomarcadores de bem-estar em peixe de aquacultura através de uma abordagem proteómica
Supervisor
Universidade do Algarve - Campus de Gambelas, Portugal
2018/07 - 2021/07 Estabelecimento de biomarcadores de bem-estar em peixe de aquacultura através de uma abordagem proteómica
Supervisor
Universidade do Algarve - Campus de Gambelas, Portugal
2018/07 - 2021/05 Estabelecimento de biomarcadores de bem-estar em peixe de aquacultura através de uma abordagem proteómica
Supervisor of Paula Farinha
Universidade do Algarve, Portugal
2017/11 - 2020/04 Estabelecimento de biomarcadores de bem-estar em peixe de aquacultura através de uma abordagem proteómica
Supervisor of Marco Cerqueira
Universidade do Algarve, Portugal
2016 - 2016 Effect of EDTA enriched diets on farmed fish allergenicity; a proteomics approach
Supervisor of Cláudia Sofia Ferreira Raposo
Universidade do Algarve, Portugal
2016 - 2016 Aplicações Biomédicas da Imagiologia de espectrometria de massa – MALDI Imaging
Supervisor of André Filipe Afonso de Sousa Fonseca
 Biomedical Sciences (Degree)
Universidade do Algarve, Portugal
2015/12 - 2016 Seabream (Sparus Aurata, Linnaeus, 1758) contamination by the parasite Amyloodinium ocellatum, produced in aquaculture – a proteomic approach
Co-supervisor of Márcio Júlio Vicente Moreira
Universidade do Algarve, Portugal

Instituto Português do Mar e da Atmosfera Olhão, Portugal
2015/07 - 2016 Effects of dietary creatine supplementation on muscle growth in gilthead seabream (Sparus aurata)
Co-supervisor of Lourenço de Oliveira Coelho e Ramos Pinto
Universidade do Algarve, Portugal

Universidade do Porto, Portugal
2007 - 2016 Nutritional influence of dietary nitrogen on fish skeletogenesis: a proteomic and functional genomics approach
Co-supervisor of Nadége Richard
Universidade do Algarve, Portugal
2015 - 2015 Deteção e modulação de agentes alergénios em peixes de aquaculture; uma perspetiva proteómica
Supervisor of Ricardo Moreira de Carvalho
Universidade do Algarve, Portugal
2015 - 2015 Identification of nutritional status molecular indicators in fish
Co-supervisor of Nadége Richard
Universidade do Algarve, Portugal
2013 - 2014 Comprehensive study of the effects of stress in teleost broodstock males in marine aquacultures: endocrinologic and proteomic approach
Co-supervisor of José Beirão Santos
Universidade do Algarve, Portugal

Instituto Português do Mar e da Atmosfera Olhão, Portugal
2009/01 - 2014 Dietary nitrogen utilization and protein expression in fish
Co-supervisor of Mahaut de Vareilles
Universidade do Algarve, Portugal
2013 - 2013 Enzymatic and Metabolic quality parameters evaluation in Sole (Solea senegalensis)
Supervisor of Bruno Tavares
 Marine Biology (Degree)
Universidade do Algarve, Portugal
2009/06 - 2013 Post-mortem changes in gilthead seabream muscle proteins as affected by nutritional factors and farming conditions: a proteomic approach
Supervisor of Tomé Santos Silva
Universidade do Algarve, Portugal
2010 - 2010 Proteomics role in disease biomarker discovery
Supervisor of Ana Mestre
 Biomedical Sciences (Degree)
Universidade do Algarve, Portugal
2009 - 2009 Proteomics and Biomarkers in Neurological diseases
Supervisor of José Eduardo Rosa
Universidade do Algarve, Portugal
2009 - 2009 Study of the proteome associated to degenerative pathologies of cartilage
Supervisor of Mauro Sousa
Universidade do Algarve, Portugal
2006 - 2009 Identification of molecular fish welfare indicators
Co-supervisor of Nadége Richard
Universidade do Algarve, Portugal
2008 - 2008 Proteomics identification of molecular welfare biomarkers during gilthhead cultivation (Sparus aurata, Linnaeus 1758)
Co-supervisor of Ricardo Alves
Universidade do Algarve, Portugal
2007 - 2007 Differential expression analysis from sea bream (Diplodus sargus) skeletal proteins in normal and deformed fish
Supervisor of Tomé Santos Silva
Universidade do Algarve, Portugal

Event organisation

Event name
Type of event (Role) 		Institution / Organization
2023/01 - 2023/01 Organizador e Docente no curso científico em “Proteomics and its applications in Biology” (2023/01 - 2023/01)
Workshop (President of the Organising Committee)
 University of HUE, Vietnam
2021/11 - 2021/11 Organização, Implementação e orador no workshop no âmbito do projeto WELFISH promovido pela Universidade do Algarve (2021/11 - 2021/11)
Workshop (President of the Organising Committee)
 Universidade do Algarve, Portugal
2021/11 - 2021/11 Organização, Implementação e orador no workshop no âmbito do projeto ALLYFISH promovido pela Universidade do Algarve (2021/11 - 2021/11)
Workshop (President of the Organising Committee)
 Universidade do Algarve, Portugal
2019/11 - 2019/11 Proteomics and its applications for aquaculture Aquaculture (2019/11 - 2019/11)
Workshop (Co-organisor)
 Universidad Nacional de Costa Rica, Costa Rica
2018/11 - 2018/11 Proteomics in Aquaculture (2018/11 - 2018/11)
Workshop
 Suranaree University of Technology, Thailand
2018 - 2018 Comissão organizadora das Olimpíadas da Química Júnior 2018 (2018 - 2018)
Meeting (Member of the Organising Committee)
 Universidade do Algarve, Portugal
2016/10 - 2016/10 Proteomics in Aquaculture (2016/10 - 2016/10)
Workshop (Co-organisor)
 Suranaree University of Technology, Thailand
2015/12/15 - 2015/12/15 Desenvolvimento do peixe de aquacultura como alimento funcional: Fortificação em nutrientes naturais e redução do potencial alergénico – AQUAVALOR (2015/12/15 - 2015/12/15)
Workshop
 Universidade do Algarve, Portugal
2012/04/12 - 2012/04/13 FARM ANIMAL PROTEOMICS ANNUAL MEETING (2012/04/12 - 2012/04/13)
Meeting (Co-organisor)
 Centro de Ciências do Mar, Portugal
2012/04/11 - 2012/04/11 WORKSHOP ON PROTEOMICS IN BIOLOGY (2012/04/11 - 2012/04/11)
Workshop (Co-organisor)
 Universidade do Algarve, Portugal
2009/10/13 - 2009/10/15 CCMAR COURSE ON 2D-DIGE (2009/10/13 - 2009/10/15)
Other (Co-organisor)
 Universidade do Algarve, Portugal
2004/12/02 - 2004/12/04 XIV BIOCHEMISTRY NATIONAL CONGRESS (2004/12/02 - 2004/12/04)
Congress (Member of the Organising Committee)
 Universidade do Algarve, Portugal

Event participation

Activity description
Type of event 		Event name
Institution / Organization
2018/02/24 - Current VIII SPB clinical biochemistry workshop, allergy and environment, February 24, 2018 University of Évora, Portugal. Apresentação oral intitulada: Fish allergenicity modulation towards the production of a low allergen fish.
Workshop
 VIII SPB clinical biochemistry workshop, allergy and environment
Universidade de Évora, Portugal
2016/04/29 - Current X Seminário Aquícula. 29 de Abril, Setúbal, Portugal. Apresentação oral intitulada: Desenvolvimento do peixe de aquacultura como alimento funcional: fortificação em nutrientes naturais e redução do potencial alergènico.
Seminar
 X Seminário Aquícula
Associação Portuguesa de aquacultores, Portugal
2015 - Current Blue week, Lisboa 2015. Apresentação oral intitulada: Contribute of aquaculture in human food; Fish allergenicity modulation Blue week
Ministério do Mar, Portugal
2015 - Current Dia Aberto Universidade do Algarve 2015
Seminar
 Dia Aberto
Universidade do Algarve, Portugal
2013 - Current Dia Aberto Universidade do Algarve 2013
Seminar
 Dia Aberto
Universidade do Algarve, Portugal
2012 - Current Dia Aberto Universidade do Algarve 2012
Seminar
 Dia Aberto
Universidade do Algarve, Portugal
2021/03/17 - 2021/03/17 Worshop de formação Conserveiras de Portugal da ANICP- Associação Nacional dos Industriais de Conservas de Peixe Apresentação oral intitulada: Produção de um peixe hipoalergénico
Workshop
 Worshop de formação Conserveiras de Portugal da ANICP- Associação Nacional dos Industriais de Conservas de Peixe
ANICP, Portugal

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2023/09 Establishment of farmed fish welfare biomarkers; A multiomics approach
(Thesis) Arguer
 Cláudia Raposo de Magalhâes (PhD)
Universidade do Algarve, Portugal
2023/05 Characterization and modulation of fish allergenicity towards the production of a low allergen farmed fish
(Thesis) Arguer
 Denise Schrama (PhD)
Universidade do Algarve, Portugal
2021/09 Chemical Mapping of Kuwait Microalgae: Biodiesel Optimization in Energy Field and Biological Applications
(Thesis) Arguer
 Saad Abu El-Soud Saad Komona (PhD)
International University of Science and Technology in Kuwait, Kuwait
2021/01/27 BIOACTIVE COMPOUNDS AND ANTIOXIDANT ACTIVITY FROM ALARIA ESCULENTA CULTIVATED ON LONG-LINES IN BANTRY BAY: EFFECT OF CULTIVATION AND PROCESSING METHOD.
President of the jury
 Silvia Blanco González (Master)
Universidade do Algarve, Portugal
2020/12 HOW CAN NATURAL COMPOUNDS SUPPLEMENTED IN EGGS IMPROVE DIGESTIVE EFFICIENCY IN FISH LARVAE? IN OVOSUPPLEMENTATION OF SPERMINE AS PROMOTER OF EARLY DIGESTIVE SYSTEM MATURATION
President of the jury
 Diogo Cabeleira Dias (Master)
Universidade do Algarve, Portugal
2020/12 DOMESTICATION OF THE GREEN SEAWEED ULVA OHNOI AKA ‘SEA LETTUCE’ FOR BIOFLOC EFFLUENT BIOREMEDIATION
President of the jury
 Malachy Edward McGovern (Master)
Universidade do Algarve, Portugal
2020/11 EFFECT OF KISSPEPTIN TREATMENT ON REPRODUCTIVE TRAITS AND CHEMICAL COMMUNICATION IN SENEGALESE SOLE, SOLEA SENEGALENSIS, BOTH DURING PUBERTY AND BREEDING STAGES
President of the jury
 Tomás Geraldes dos Santos (Master)
Universidade do Algarve, Portugal
2020 Effects of Different protein to carbohydrate ratio in pellets for rearing European cuttlefish (Sepa officinallis, Linnaeus 1758) juveniles
President of the jury
 Nuno Dias Pinheiro Valadas Coriel (Master)
Universidade do Algarve, Portugal
2018 Influence of sperm density on cryopreservation outcomes in sturgeon João Pedro Oliveira Nascimento (Master)
Universidade do Algarve, Portugal
2018 Optimization of a sperm cryopreservation protocol for spotted wolffish (Anarhichas minor Olafsen, 1772) João Paulo Ribeiro Proença Santana (Master)
Universidade do Algarve, Portugal
2018 Optimization of in vitro fertilization using cryopreserved sperm of Crassostrea angulata and establishment of a cryopreservation protocol for Chamelea gallina Ana Luísa Lopes Santos (Master)
Universidade do Algarve, Portugal
2018 Optimisation of algorithms to predict biomass and size distribution of fish reared in cages, using the Aquanetix production management software Diogo Alexandre Marques Soares (Master)
Universidade do Algarve, Portugal
2017/07 O envolvimento de proteínas salivares na sensibilidade gustativa Lénia Isabel Alfaite Rodrigues (PhD)
Universidade de Évora, Portugal
2017/05 Molecular mechanisms of desiccation tolerance in Fucus Catarina Figueiredo da Mota (PhD)
Universidade do Algarve, Portugal
2017 O efeito da qualidade da proteína na condição de juvenis de corvina (Argyrosomus regius) Rui Miguel dos Santos Pereira (Master)
Universidade do Algarve, Portugal
2017 Effects of native probiotic-candidates on the immune status, inflammatory response and disease resistance of turbot (Scophthalmus maximus, L.), upon rectal administration Filipa Andreia Coutinho Beça (Master)
Universidade do Algarve, Portugal
2017 Aquaculture of the stalked barnacle Pollicipes pollicipes: improving farming techniques in an extensive system located in Sines (Portugal) Jérôme Pierre Joseph Darras (Master)
Universidade do Algarve, Portugal
2017 Effects of purslane (Portulaca olerácea L.) and Shewanella putrefaciens probiotic enriched diet on gilthead seabream (Sparus aurata L.) Maria Cámara Ruiz (Master)
Universidade do Algarve, Portugal
2017 Towards an early weaning in Senegalese sole (Solea Senegalensis Kaup, 1858) André Filipe Gonçalves Barreto (Master)
Universidade do Algarve, Portugal
2017 Effects of a fast growth microdiet on larval development of gilthead seabream (Sparus aurata, Linnaeus, 1758) and meagre (Argyrosomus regius, Asso, 1801) Sofia Isabel Martins Viegas (Master)
Universidade do Algarve, Portugal
2017 Enhancement of spermiation in meagre (Argyrosomus regius) using two administration methods of GnRHa Renata Fleck Pontes dos Santos (Master)
Universidade do Algarve, Portugal
2016/09 Proteomic and Phenotypic Approaches to Assess Nutritional Physiology in Atlantic Salmon Waldo G. Nuez-Ortin (PhD)
University of Tasmania, Australia
2016 Reutilização de águas resultantes da produçãoo de explosivos: caso de estudo “Empresa X Luís Miguel Simão Madeira (Master)
Universidade do Algarve, Portugal
2016 Production of biofuels from microalgal biomass Henrique Manuel Mate Carvalho (Master)
Universidade do Algarve, Portugal
2016 Effect of EDTA enriched diets on farmed fish allergenicity; a proteomics approach Cláudia Sofia Ferreira Raposo (Master)
Universidade do Algarve, Portugal
2016 Propriedades sensoriais, características texturais e perfil nutricional de tainha de cultivo e selvagem Filipa Alexandra Marracho Diniz (Master)
Universidade do Algarve, Portugal
2016 Valorização Biológica de Resíduos Orgânicos Patrícia Alexandre Fernandes Mestre (Master)
Universidade do Algarve, Portugal
2015/02 Comparative analysis of sugar biosynthesis-related proteins of Sorghum bicolor (L) Moench and investigation of their role in hyperosmotic stress tolerance Anathi Perseverence Njokweni (PhD)
University of the Western Cape, South Africa
2015 Study of the expression of diferente genes of long-chain polyunsaturated fatty acids (LC-PUFA) metabolismo during the early paralarval development of the common octopus (Octopus vulgaris) Joana Maria Teixeira de Moura (Master)
Universidade do Algarve, Portugal
2015 Contamination of farmed gilthead sea bream (Sparus aurata, Linnaeus, 1758) by the parasite Amyloodinium ocellatum – A proteomic approach Márcio Júlio Vicente Moreira (Master)
Universidade do Algarve, Portugal
2015 Effect of temperature on embryonic development, larval viability and biomarkers in the first stages of life of Octopus vulgaris (Cuvier, 1797) Martim Ramos Chaves Lopes Magro (Master)
Universidade do Algarve, Portugal
2015 Development and standardization of a protocolo for sperm cryopreservation of two importante comercial oyster species Francisca Félix de Azeredo Pinto e Melo (Master)
Universidade do Algarve, Portugal
2015 Modelação do balanço hídrico do sistema aquífero da Campina de Faro João Miguel Sousa Viegas (Master)
Universidade do Algarve, Portugal
2015 Modelação de cenários de exploração no sistema aquífero de Luz-Tavira António Manuel Marques Góis (Master)
Universidade do Algarve, Portugal
2015 Effects of dietary creatine supplementation on muscle growth in gilthead seabream (Sparus aurata) Lourenço de Oliveira Coelho e Ramos Pinto (Master)
Universidade do Porto, Portugal

Universidade do Algarve, Portugal
2015 Aplicação de modelo matemático em sistema de lamas ativadas na estação de tratamento de águas residuais de albufeira poente Sara Margarida Soares Correia Barreto (Master)
Universidade do Algarve, Portugal
2015 Gestão de resíduos de construção e demoliçãoo em Loulé (Algarve) Ricardo Miguel Santos Henrique (Master)
Universidade do Algarve, Portugal
2015 Inclusão da microalga (Phaedactylum tricornutum) em rações de acabamento para dourada: efeito na pigmentaçãoo e outros atributos da qualidade Mónica Isabel Botas Barbeiro (Master)
Universidade do Algarve, Portugal
2015 Crescimento e qualidade microbiológica das ostras produzidas em cultivos multitróficos versus monocultivos André Tiago Carvalhal Silva Ferreira (Master)
Universidade do Algarve, Portugal
2015 Ciclo zooplanctónico em tanques de terra usados para aquacultura de peixes marinhos em sistema multitrófico integrado (IMTA) Tânia Margarida Lourenço de Abreu (Master)
Universidade do Algarve, Portugal
2015 Gla-Rich-Protein (GRP): a novel vitamin K-dependent protein, with potential to interfere with the dynamics of basic-calcium phosphate (BCP) crystals formation Diego Gerini (Other)
Universidade do Algarve, Portugal
2014/01 Dietary nitrogen utilization and protein expression in fish Mahaut Diane Marie Stéphanie de Labroue de Vareilles Sommiéres (PhD)
Universidade do Algarve, Portugal
2013/06 Using proteomic technologies to understand the impact of stress and nutritional factors on fish metabolism, welfare and quality Tomé Pereira de Azevedo Santos Silva (PhD)
Universidade do Algarve, Portugal
2013/01 The proteomic response of Listeria monocytogenes to cheese matrix and gastrointestinal stress Jessie Mara Donaire Bosisio de Melo (PhD)
Universidade do Algarve, Portugal
2013 Montagem de um sistema laboratorial de células de combustível microbianas para aproveitamento energético e tratamento de efluentes domésticos Vitor Manuel Lopes Mendes (Master)
Universidade do Algarve, Portugal
2013 A microbiota intestinal de doentes jovens com diabetes Mellitus tipo 1: uma abordagem proteómica e metabolómica Adélia Cristina Bravo Brito de Abreu Ova (Master)
Universidade do Algarve, Portugal
2012 Listeria monocytogenes em condições de simulação do sistema intestinal e a infecção no modelo Galleria mellonella Denise Schrama (Master)
Universidade do Algarve, Portugal
2011 Development of electrochemical nitrite biosensors using cytochrome c nitrite reductase from Desulfovibrio desulfuricans ATCC 27774 Célia Marisa Costa Figueiredo Silveira (PhD)
Universidade Nova de Lisboa, Portugal
2011 Modificação Química de Álcoois Terpénicos Naturais Stephany Martins (Other)
Universidade do Algarve, Portugal
2010 Purification and characterization of Gla proteins in fish and mammal models Sofia Cavaco (Master)
Universidade do Algarve, Portugal
2010 Identification and characterization of two Ferritin Isoforms from the clam R. decussates and evaluation of some of its biological properties Márcio Filipe Simão (Master)
Universidade do Algarve, Portugal
2009 Identification and characterization of water matrix soluble proteins from oyster nacre Crassostrea gigas Daniel Oliveira (Other)
Universidade do Algarve, Portugal
2008 Proteomic identification of molecular welfare biomarkers during gilthhead cultivation (Sparus aurata, Linnaeus 1758) Ricardo Alves (Master)
Universidade do Algarve, Portugal
2007/04 Functional analysis of Desulfovibrio gigas ROO and Ech hydrogenase Rute Rodrigues (PhD)
Universidade Nova de Lisboa, Portugal
2003/01 Purification, biochemical characterization and localization at single cell resolution of Matriz Gla Protein (MGP) and Bone Gla Protein (BGP) in the teleost fish Argyrosomus regius Dina Costa Simes (PhD)
Universidade do Algarve, Portugal
2002 Comparative study for fat extraction methods in fish products Andreia Alves (Other)
Universidade do Algarve, Portugal

Instituto Português do Mar e da Atmosfera Olhão, Portugal

Association member

Society Organization name Role
2017 - Current International Journal of Fisheries Science and research Editorial Board Member
2016 - Current Journal of Integrated OMICS Editorial Board Member
2014/04/01 - Current Rede Procura - Portuguese Proteomics Association
2001/01/27 - Current World Aquaculture Society
2000/01/01 - Current Centro de Ciências do Mar do Algarve – CCMAR Member
2012 - 2015 Human Proteome Organization - HUPO
2004 - 2006 Sociedade Portuguesa de Bioquímica – SPB

Committee member

Activity description
Role 		Institution / Organization
2019 - Current Quadro editorial para a revista Animals
Other
2018 - Current Quadro editorial para a revista Journal of Integrated OMICS
Other
2019 - 2023 COST – European Cooperation in Science and Technology. “ The Core Outcome Measures for Food Allergy (COMFA)”
Other
2014 - 2018 COST – European Cooperation in Science and Technology. “Improving Allergy risk assessment strategy for new food proteins (IMPARAS)”
Other
2010 - 2014 COST – European Cooperation in Science and Technology. “Farm animal proteomics”
Other

Conference scientific committee

Conference name Conference host
2012/04/12 - 2012/04/13 FARM ANIMAL PROTEOMICS ANNUAL MEETING (2012 Vilamoura, Portugal

Consulting

Activity description Institution / Organization
2015 - 2015 Concurso público referente ao Procedimento com a referência «Ajuste Direto - Regime Geral n.º 69/DSFP-DAP-NC/2015» e a designação «Aquisição de Reagentes Químicos Específicos ». Centro de Ciências do Mar, Portugal

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2023 - Current Química Geral Biologia (Licenciatura) Universidade do Algarve, Portugal
2016/02/01 - Current Química Orgânica Dietética e Nutrição, Farmácia (Bacharelato) Universidade do Algarve Escola Superior de Saúde, Portugal
2016 - Current Química orgânica I Ciências Farmacêuticas (Mestrado integrado) Universidade do Algarve, Portugal
2016 - Current Química orgânica II Ciências Farmacêuticas (Mestrado integrado) Universidade do Algarve, Portugal
2014 - Current Sistemas Orgânicos Funcionais I (Curso de mestrado (conclusão do curso de especialização)) Universidade do Algarve, Portugal
2014 - Current Estrutura e Função de Biomoléculas (Mestrado) Universidade do Algarve, Portugal
2012 - Current Bioquímica Biologia Marinha (Licenciatura) Universidade do Algarve, Portugal
2009 - Current Trabalho Experimental em Biologia Marinha Biologia Marinha e Pescas (Licenciatura) Universidade do Algarve, Portugal
2006 - Current Biology of Bone and Cartilage Biologia Marinha (Mestrado integrado) Universidade do Algarve, Portugal
2000/01/01 - Current Química Orgânica Biologia e Geologia (Ensino de), Biologia Marinha, Biologia, Bioquímica, Biotecnologia, Ciências Farmacêuticas (Licenciatura) Universidade do Algarve, Portugal
2023/01 - 2023/01 Proteomics and its applications to Biology (Postgraduate Certificate)
2021 - 2021 Alergias e Produção de peixe hipoalergénico Curso de formação Conserveiras de Portugal da ANICP (Curso de Especialização Tecnológica) ANICP, Portugal
2019/11 - 2019/11 Proteomics and its applications in Aquaculture (Postgraduate Certificate) Universidad Nacional de Costa Rica, Costa Rica
2018/11 - 2018/11 Proteomics and its applications in aquaculture (Postgraduate Certificate) Suranaree University of Technology Institute of Agricultural Technology, Thailand
2017/11 - 2017/11 Proteomics and its applications in Aquaculture (Postgraduate Certificate) Suranaree University of Technology Institute of Agricultural Technology, Thailand
2012/02/01 - 2016/07/31 Estrutura e Função dos Compostos Orgânicos Ciências Biomédicas (Licenciatura) Universidade do Algarve, Portugal
2014/09/01 - 2015/01/31 Proteómica em Sistemas Clínicos Ciências Biomédicas (Mestrado integrado) Universidade do Algarve, Portugal
2012 - 2015 Gel based protein separation by two-dimensional gel electrophoresis and protein characterization by MALDI-TOF/TOF mass spectrometry (Outros) Universidade do Porto Centro Interdisciplinar de Investigação Marinha e Ambiental, Portugal

Universidade do Porto Instituto de Patologia e Imunologia Molecular, Portugal

Evaluation committee

Activity description
Role 		Institution / Organization Funding entity
2021 - 2021 Expert and Evaluator para postdoctoral funding programme PRIME (Postdoctoral Researchers International Mobility Experience)
Evaluator
 Deutscher Akademischer Austauschdienst, Germany
2020/08/09 - 2020/10/25 Expert and evaluator for research projects for Agência Nacional de Inovação (ANI)
Evaluator
 Agência Nacional de Inovação SA, Portugal Agência Nacional de Inovação SA
2019/07/18 - 2019/07/31 Expert and evaluator of research projects for the Croatian Science National Foundation
Evaluator
 Hrvatska Zaklada za Znanost, Croatia Hrvatska Zaklada za Znanost

Interview (newspaper / magazine)

Activity description Newspaper / Forum
2021/01/08 A criação de um peixe hipoalergénico valeu à Universidade do Algarve duas distinções nos prémios Food & Nutrition Awards. Conheça melhor este projeto. Diário Económico
2020 Projeto Peixe Hipoalergénico RTP Noticias
2020 Peixe Hipoalergénico, tolerável a quem sofre de alergia alimentar, vence distinção Born from Knowledge GreenSavers
2020 Projeto de peixe hipoalergénico vence prémio da Agência Nacional de Inovação Jornal Médico
2020 Peixe hipoalergénico, tolerável a quem sofre de alergia alimentar, vence distinção Born from Knowledge Postal do Algarve
2020 Projeto de peixe hipoalergénico vence prémio da Agência Nacional de Inovação Jornal Económico
2020 Veja aqui os projetos vencedores do Food & Nutrition Awards 2019 Jornal Económico
2020 Sofres de alergias alimentares? Peixe hipoalergénico vale prémio a investigadores Jornal Público

Journal scientific committee

Journal title (ISSN) Publisher
2019/10 - Current Diseases of Aquatic Organisms
2018 - Current Aquaculture (0044-8486) Elsevier
2017 - Current Food Chemistry (0308-8146) Elsevier
2016 - Current Comparative Biochemistry and Physiology (0010-406X) Elsevier
2015 - Current Aquaculture Research (1365-2109) Wiley (Blackwell Publishing)
2015 - Current EuPA Open Proteomics (2212-9685) Elsevier
2013 - Current Journal of Proteomics
2013 - Current Proteomics
2013 - Current Proteome Science (1477-5956) Springer (Biomed Central Ltd.)
2012/12 - Current AFRICAN JOURNAL OF BIOTECHNOLOGY (1684-5315) Academic Journals
2012/10 - Current African Journal of Pharmacy and Pharmacology (1996-0816) Academic Journals
2012/05 - Current African Journal of Agricultural Research (1991-637X) Academic Journals
2016/01 - 2019/05 Comparative biochemistry and physiology PartD: Genomics And Proteomics

Mentoring / Tutoring

Topic Student name
2019 - 2021 Welfare Biomarkers establishment in farmed fish using a proteomics approach Raquel Carrilho
2017 - 2021 Development of a farmed fish with reduced allergenic potential Paula Farinha Resende
2018 - 2020 Welfare Biomarkers establishment in farmed fish using a proteomics approach Marco Cerqueira
2018 - 2019 Welfare Biomarkers establishment in farmed fish using a proteomics approach Cláudia Raposo de Magalhães
2017 - 2018 Development of a farmed fish with reduced allergenic potential Denise Schrama
2016 - 2018 Healthy and sustainable feeds for farmed fish Rita Cólen
2016 - 2017 Healthy and sustainable feeds for farmed fish Nadége Richard
2016 - 2017 Healthy and sustainable feeds for farmed fish Denise Schrama
2015 - 2015 Development of a farmed fish as a functional food: Natural nutrient fortification and allergenic potential reduction Ana Ramalho
2014 - 2015 Development of a farmed fish as a functional food: Natural nutrient fortification and allergenic potential reduction Ana Ramalho
2012 - 2014 Development of a microencapsulated feed for fish larvae Rita Cólen
2012 - 2013 Development of a feed to reduce the effects of Winter disease in Gilthead seabream recurring to molecular indicators of condition Inês Luís
2010 - 2012 Edital CCMAR/BI/0019/2010 Odete Cordeiro
2009 - 2010 Edital CCMAR/BI/0001/2009 Tomé Silva

Other jury / evaluation

Activity description Institution / Organization
2022 - Current Expert and Evaluator para postdoctoral funding programme PRIME (Postdoctoral Researchers International Mobility Experience) Deutscher Akademischer Austauschdienst, Germany
2020 - Current Expert and Evaluator para Agência Nacional de Inovação (ANI) Agência Nacional de Inovação SA, Portugal
2023 - 2023 Concurso para Bolsa de investigação para mestre. Edital UALG 018/2023 - Projeto 10EX00002 - Fundo de Investimento em I&D UALG. Universidade do Algarve, Portugal
2023 - 2023 Concurso para Bolsa de investigação para mestre, Edital UALG 002/2023 - Projeto 10EX00002 - Fundo de Investimento em I&D UALG Universidade do Algarve, Portugal
2021 - 2021 Júri no âmbito do concurso com a Ref.- CCMAR/BD/04/2021 para a atribuição de 1 bolsa de Doutoramento financiada por AQUA-RP (Receitas Próprias) e pelo projeto MAXIMUS.PT - “Investigação e desenvolvimento para a produção de larvas e juvenis de pregado em maternidade” com a referência ALG-01-0247-FEDER-069769 financiado pelo Fundo Europeu de Desenvolvimento Regional (FEDER) através do Programa Operacional do Algarve (PO CRESC ALGARVE 2020). Centro de Ciências do Mar, Portugal
2021 - 2021 Concurso para posição de Early-Stage Researcher. Edital CCMAR/ESR/04/2021 - EATFish European Aquaculture Training for improving Seafood Husbandry. Grant agreement No. 956697 (EATFish), a Marie Sklodowska Curie Innovative Training Network (ITN-ETN) funded in the framework of the HORIZON 2020 programme. Centro de Ciências do Mar, Portugal
2019/07 - 2019/07 Expert and Evaluator para Croatian Science Foundation Hrvatska Zaklada za Znanost, Croatia
2019 - 2019 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 009/2019 - Welfare Biomarkers establishment in farmed fish using a proteomics approach - WELFISH 16-02-05-FMP-0012. 2019 Universidade do Algarve, Portugal
2018 - 2018 Júri para atribuição de Bolsa de investigação para doutor, Edital UALG 016/2018 - Welfare Biomarkers establishment in farmed fish using a proteomics approach - WELFISH 16-02-05-FMP-0012. 2018 Universidade do Algarve, Portugal
2018 - 2018 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 017/2018 - Welfare Biomarkers establishment in farmed fish using a proteomics approach - WELFISH 16-02-05-FMP-0012. 2018 Universidade do Algarve, Portugal
2017 - 2017 Júri para atribuição de Bolsa de investigação para doutor, Edital UALG 049/2017 - Development of a farmed fish with reduced allergenic potential – ALLYFISH, 16-02-01-FMP-0014. 2017 Universidade do Algarve, Portugal
2017 - 2017 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 050/2017 - Development of a farmed fish with reduced allergenic potential – ALLYFISH, 16-02-01-FMP-0014. 2017 Universidade do Algarve, Portugal
2017 - 2017 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 051/2017 - Development of a farmed fish with reduced allergenic potential – ALLYFISH, 16-02-01-FMP-0014. 2017 Universidade do Algarve, Portugal
2016 - 2016 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 047/2016 - Healthy and sustainable feeds for farmed fish - ALISSA. ALG-01-0247-FEDER-003520. 2016 Universidade do Algarve, Portugal
2016 - 2016 Júri para atribuição de Bolsa de investigação para doutor, Edital UALG 007/2016 - Healthy and sustainable feeds for farmed fish - ALISSA. ALG-01-0247-FEDER-003520. 2016 Universidade do Algarve, Portugal
2015 - 2015 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 043/2015 - Development of a farmed fish as a functional food: Natural nutrient fortification and allergenic potential reduction - AQUAVALOR, refª 31-03-05-FEP-0060. 2015 Universidade do Algarve, Portugal
2014 - 2014 Júri para atribuição de Bolsa de investigação para mestre, public notic Edital e UALG 085/2014 - Development of a farmed fish as a functional food: Natural nutrient fortification and allergenic potential reduction - AQUAVALOR, refª 31-03-05-FEP-0060. 2014 Universidade do Algarve, Portugal
2014 - 2014 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 055/2014 - Development of a farmed fish as a functional food: Natural nutrient fortification and allergenic potential reduction - AQUAVALOR, refª 31-03-05-FEP-0060. 2014 Universidade do Algarve, Portugal
2012 - 2012 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG Project: 13380 – MICALA - "Development of a microencapsulated feed for fish larvae”. 2012 Universidade do Algarve, Portugal
2012 - 2012 Júri para atribuição de Bolsa de investigação para mestre, Edital UALG 008/2014 - Development of a feed to reduce the effects of Winter disease in Gilthead seabream recurring to molecular indicators of condition – INUTR, Refª 21595. 2012 Universidade do Algarve, Portugal
2010 - 2010 Júri para atribuição de Bolsa de investigação para mestre, Edital CCMAR/BI/0019/2010. Centro de Ciências do Mar, Portugal
2009 - 2009 Júri para atribuição de Bolsa de investigação para mestre, Edital CCMAR/BI/0001/2009 Centro de Ciências do Mar, Portugal
2008 - 2008 Júri para atribuição de Bolsa de investigação para mestre, Edital CCMAR/BI/0015/2008 Centro de Ciências do Mar, Portugal
2008 - 2008 Júri para atribuição de Bolsa de investigação para mestre, Edital CCMAR/BI/0022/2008
2008 - 2008 Júri para atribuição de Bolsa de investigação para mestre, Edital CCMAR/BI/0023/2008 Centro de Ciências do Mar, Portugal
Distinctions

Award

2020 Prémio melhor projeto investigação e Desenvolvimento 2020 - Food and Nutrition awards 2020
Food and Nutrition Awards, Portugal
2020 Prémio Born from Knowledge 2020 - ANI
Agência Nacional de Inovação SA, Portugal
2019 Best Oral Presentation at L'acqua 2019 Latin America Congress
World Aquaculture Society, United States
2016 Best Poster Presentation at 2nd Global summit on aquaculture & fisheries
2013 Best Poster Presentation at Farmed animal proteomics 2013 annual meeting
2007 Ceratonia Prize for best project 2007 in Sea Sciences
Caixa Geral de Depositos, Portugal