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Alexandre Aleixo has a degree in Biological Sciences (1995) and a master's degree (1997) from the State University of Campinas, Brazil (1995), and a doctorate in Zoology from the Louisiana State University, USA (2002). He is currently a researcher and curator of the ornithological and genetic resource collections at the Finnish Museum of Natural History (LUOMUS) at the University of Helsinki, Finland. He is also licensed researcher at the Museu Paraense Emílio Goeldi, associate researcher at the Ornithology Department at the University of Natural Sciences Academy Drexel (USA), professor of postgraduate courses in Biodiversity and Evolution at the Museu Paraense Emílio Goeldi (PPGBE) and Zoology (PPGZoo) at the Federal University of Pará / Museu Paraense Emílio Goeldi and Rede Bionorte (multi-campuses) and Fellow at American Ornithologists' Union (AOU). Alexandre Aleixo (co)supervised and has been (co)supervising 60 Master's, Doctorate, scientific initiation and post-doctoral students. Participates as Coordinator of the taxon Aves in the process of assessing the conservation status of birds in the Amazon with ICMBIO-CEMAVE, Brazil. He has experience in Zoology, with an emphasis on Ornithology, working mainly in the following areas: biogeography, conservation, community ecology, fauna inventories, molecular systematics and taxonomy of Neotropical birds, topics on which he has already produced more than 250 publications and communications in journals , books, newspapers, magazines and events, both at national and international levels.
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Identification

Personal identification

Full name
Alexandre Aleixo

Citation names

  • Alexandre, Aleixo

Author identifiers

Ciência ID
B61F-00F4-8C84
ORCID iD
0000-0002-7816-9725

Telephones

Mobile phone
  • (+358) 0503445331 (Professional)

Addresses

  • P.O. Box 17, 00014, Helsinki, Helsinki, Finland (Professional)

Websites

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
Spanish; Castilian Upper intermediate (B2) Advanced (C1) Elementary (A2) Advanced (C1) Advanced (C1)
German Elementary (A2) Intermediate (B1) Elementary (A2) Intermediate (B1) Intermediate (B1)
French Elementary (A2) Upper intermediate (B2) Beginner (A1) Elementary (A2) Intermediate (B1)
Italian Elementary (A2) Intermediate (B1) Beginner (A1) Intermediate (B1) Beginner (A1)
Finnish Beginner (A1) Beginner (A1) Beginner (A1) Elementary (A2) Beginner (A1)
Projects

Contract

Designation Funders
2011 - 2015 Uso da ferramenta código de barras no monitoramento da diversidade genética de populações de aves de áreas de canga na região da Serra dos Carajás, Pará
Edital 001/2010 VALE/Fundação Amazônia Paraense (Projeto Rede)
 Fundação Amazônia Paraense de Amparo à Pesquisa
Outputs

Publications

Book chapter
  1. Sidnei de Melo Dantas; Leonardo S. Miranda; Alexandre, Aleixo. "Avifauna dos municípios de Bagre, Curralinho e Portel, Mesorregião do Marajó". In Efeitos da implantação de linhas de distribuição de energia sobre a paisagem e a fauna do Marajó, 77-110. Belém, Brazil: Museu Paraense Emílio Goeldi, 2017.
    Published
  2. Elinete B. Rodrigues; Lucas Eduardo Araujo-Silva; Maya Faccio; Alexandre, Aleixo. "Distribuição espacial e composição de comunidades de aves de sub-bosque na área do distrito florestal sustentável da BR-163". In Distrito florestal sustentável da BR-163: dinâmicas sociais, mudanças ambientais e produção florestal., edited by Ana Luisa Albernaz, 249-269. Belém, Brazil: Museu Paraense Emílio Goeldi, 2015.
    Published
Conference abstract
  1. Talita Ribas; Alexandre, Aleixo; Pablo Suarez; C. Y. Nagamachi; M. L. S. Pinheiro; Malcolm A. Ferguson-Smith; Fengtang Yang; Julio Cesar Pieczarka. "Multidirectional Chromosome Painting with Whole Chromosome Probes from Burhinus oedicnemus (Charadriiformes) in the Genome of Glyphorynchus spirurus (Passeriformes, Furnariidae) Reveal Multiple Fissions during Karyotype Evolution of Birds". Paper presented in 21st International Chromosome Conference, Foz de Iguaçu, 2016.
    Published
Journal article
  1. Rafael N. Leite; Rebecca T. Kimball; Edward L. Braun; Elizabeth P. Derryberry; Peter A. Hosner; Graham E. Derryberry; Marina Anciaes; et al. "Phylogenomics of manakins (Aves: Pipridae) using alternative locus filtering strategies based on informativeness". Molecular Phylogenetics and Evolution 155 (2021): https://researchportal.helsinki.fi/en/publications/f4cf0a2c-fb33-492b-adf5-a0153bd7bf3a.
    10.1016/j.ympev.2020.107013
  2. Leonardo S. Miranda; Bernardo O. Prestes; Alexandre Aleixo. "Molecular systematics and phylogeography of a widespread Neotropical avian lineage: evidence for cryptic speciation with protracted gene flow throughout the Late Quaternary". Biological journal of the Linnean Society 132 2 (2021): 431-450. https://researchportal.helsinki.fi/en/publications/569592e2-0502-4039-90d3-b258132f7cbb.
    10.1093/biolinnean/blaa193
  3. Antonita Santana; Sofia Marques Silva; Romina Batista; Iracilda Sampaio; Alexandre Aleixo. "Molecular systematics, species limits, and diversification of the genus Dendrocolaptes (Aves Furnariidae)". Journal of Zoological Systematics and Evolutionary Research 59 1 (2021): 277-293. https://researchportal.helsinki.fi/en/publications/cb7b8df6-5b65-40ca-9f62-11433aed1292.
    10.1111/jzs.12408
  4. Michael G. Harvey; Gustavo A. Bravo; Santiago Claramunt; Andres M. Cuervo; Graham E. Derryberry; Jaqueline Battilana; Glenn F. Seeholzer; et al. "The evolution of a tropical biodiversity hotspot". Science 370 6522 (2020): 1343-+. https://researchportal.helsinki.fi/en/publications/fb1ef1f8-a982-480f-bdda-d6dba3191d41.
    10.1126/science.aaz6970
  5. Shaohong Feng; Josefin Stiller; Yuan Deng; Joel Armstrong; Qi Fang; Andrew Hart Reeve; Duo Xie; et al. "Dense sampling of bird diversity increases power of comparative genomics". Nature 587 7833 (2020): 252-+. https://researchportal.helsinki.fi/en/publications/39af2301-1be3-45fe-a816-bbd12a84e708.
    10.1038/s41586-020-2873-9
  6. Aurea A. Cronemberger; Alexandre Aleixo; Else K. Mikkelsen; Jason T. Weir. "Postzygotic isolation drives genomic speciation between highly cryptic Hypocnemis antbirds from Amazonia". Evolution 74 11 (2020): 2512-2525. https://researchportal.helsinki.fi/en/publications/76c05273-37a2-4254-aad5-ef08e5d33df2.
    10.1111/evo.14103
  7. Carina Carneiro de Melo Moura; Alexandre M. Fernandes; Alexandre Aleixo; Helder Farias Pereira de Araujo; Erich de Freitas Mariano; Michael Wink. "Evolutionary history of the Pectoral Sparrow Arremon taciturnus". Ibis 162 4 (2020): 1198-1210. https://researchportal.helsinki.fi/en/publications/19976d58-f637-4ba9-ab84-63bb12a91ca7.
    10.1111/ibi.12813
  8. A. V. Rocha; G. S. Cabanne; Alexandre Aleixo; L. F. Silveira; P. Tubaro; R. Caparroz. "Pleistocene climatic oscillations associated with landscape heterogeneity of the South American dry diagonal explains the phylogeographic structure of the narrow-billed woodcreeper (Lepidocolaptes angustirostris, Dendrocolaptidae)". Journal of Avian Biology 51 9 (2020): https://researchportal.helsinki.fi/en/publications/a4bc1e8e-c24c-4559-a4c2-45feb14861e5.
    10.1111/jav.02537
  9. Paola Pulido-Santacruz; Alexandre Aleixo; Jason T. Weir. "Genomic data reveal a protracted window of introgression during the diversification of a neotropical woodcreeper radiation". Evolution 74 5 (2020): 842-858. https://researchportal.helsinki.fi/en/publications/ec7be8c9-5a2a-4406-9e6e-fc5c8f7a3217.
    10.1111/evo.13902
  10. Larissa Sampaio; Dnilson Oliveira Ferraz; Ana Carolina Moreira da Costa; Alexandre Aleixo; Pablo Vieira Cerqueira; Juliana Araripe; Pericles Sena do Rego. "Analyses of plumage coloration and genetic variation confirm the hybridization of Pipra fasciicauda and Pipra aureola in the Brazilian Amazon basin". Journal of Ornithology 161 2 (2020): 503-508. https://researchportal.helsinki.fi/en/publications/fae8382f-ee51-4bf5-8f26-76e574494ff2.
    10.1007/s10336-020-01744-1
  11. Pablo Vieira Cerqueira; Gabriela Ribeiro Gonçalves; Alexandre Aleixo. "Two intergeneric hybrids between motmots from the Amazon forest". Ornithology Research 28 1 (2020): 57-60. https://researchportal.helsinki.fi/en/publications/b7b44fd2-e2f1-40d0-8797-e1b39a00e5b1.
    10.1007/s43388-020-00002-5
  12. Gregory Thom; Alexander T. Xue; Andre O. Sawakuchi; Camila C. Ribas; Michael J. Hickerson; Alexandre Aleixo; Cristina Miyaki. "Quaternary climate changes as speciation drivers in the Amazon floodplains". Science Advances 6 11 (2020): https://researchportal.helsinki.fi/en/publications/daad2565-85e1-4843-8e5d-d0e3434c41dd.
    10.1126/sciadv.aax4718
  13. Camila Alves Reis; Cleyssian Dias; Juliana Araripe; Alexandre Aleixo; Marina Anciaes; Iracilda Sampaio; Horacio Schneider; Pericles Sena do Rego. "Multilocus data of a manakin species reveal cryptic diversification moulded by vicariance". Zoologica Scripta 49 2 (2020): 129-144. https://researchportal.helsinki.fi/en/publications/c952c153-bb9a-4a3a-ac6f-10bbaa7298fa.
    10.1111/zsc.12395
  14. Romina Batista; Urban Olsson; Tobias Andermann; Alexandre Aleixo; Camila Cherem Ribas; Alexandre Antonelli. "Phylogenomics and biogeography of the world's thrushes (Aves, Turdus)". Proceedings of the Royal Society B. Biological Sciences 287 1919 (2020): https://researchportal.helsinki.fi/en/publications/2c725245-19f5-41eb-af31-2b1ed57d37b1.
    10.1098/rspb.2019.2400
  15. Erasmo Andrade da Silva; Helder Farias Pereira de Araujo; Alexandre Aleixo; Alexandre Antonelli; Alexandre M. Fernandes. "The effects of climate change on the distribution of South American antbirds (Thamnophilus punctatus complex) as affected by niche divergences and contact zone interactions between species". Journal of Ornithology 161 1 (2020): 229-241. https://researchportal.helsinki.fi/en/publications/11549883-c1d7-4642-bc18-28cd117601ff.
    10.1007/s10336-019-01721-3
  16. Eduardo D. Schultz; Jorge Pérez-Emán; Alexandre Aleixo; Cristina Y. Miyaki; Robb T. Brumfield; Joel Cracraft; Camila C. Ribas. "Diversification history in the Dendrocincla fuliginosa complex (Aves: Dendrocolaptidae): insights from broad geographic sampling". Molecular Phylogenetics and Evolution 140 (2019): https://researchportal.helsinki.fi/en/publications/7309b16c-debd-471b-93de-eb6f3258af9b.
    10.1016/j.ympev.2019.106581
  17. Sofia Marques Silva; A. Townsend Peterson; Lincoln Carneiro; Tiberio Cesar Tortola Burlamaqui; Camila C. Ribas; Tiago Sousa-Neves; Leonardo S. Miranda; et al. "A dynamic continental moisture gradient drove Amazonian bird diversification". Science Advances 5 7 (2019): https://researchportal.helsinki.fi/en/publications/06066c08-90ee-48a4-9c0c-0156c2d0bb42.
    10.1126/sciadv.aat5752
  18. Carl H. Oliveros; Daniel J. Field; Daniel T. Ksepka; F. Keith Barker; Alexandre Aleixo; Michael J. Andersen; Per Alstrom; et al. "Earth history and the passerine superradiation". Proceedings of the National Academy of Sciences of the United States of America 116 16 (2019): 7916-7925. https://researchportal.helsinki.fi/en/publications/3178172f-fc51-4854-84a1-e35696f1c6f6.
    10.1073/pnas.1813206116
  19. Leonardo Moura dos Santos Soares; John Bates; Lincoln Silva Carneiro; Marcos Persio Dantas Santos; Alexandre Aleixo. "Molecular systematics, biogeography and taxonomy of forest-falcons in the Micrastur ruficollis species complex (Aves: Falconidae)". Journal of Avian Biology 50 4 (2019): https://researchportal.helsinki.fi/en/publications/a9831921-2dc7-4287-a712-26ca5ed6e6f8.
    10.1111/jav.01943
  20. Gustavo S. Cabanne; Leonardo Campagna; Natalia Trujillo-Arias; Kazuya Naoki; Isabel Gomez; Cristina Y. Miyaki; Fabricio R. Santos; et al. "Phylogeographic variation within the Buff-browed Foliage-gleaner (Aves". Molecular Phylogenetics and Evolution 133 (2019): 198-213. https://researchportal.helsinki.fi/en/publications/2f80687f-53e4-4228-9c9c-cb0bb3b0d6a2.
    10.1016/j.ympev.2019.01.011
  21. Sofia Marques Silva; Luis A. Ruedas; Larissa Hasnah Santos; Jose de Sousa e Silva; Alexandre Aleixo. "Illuminating the obscured phylogenetic radiation of South American Sylvilagus Gray, 1867 (Lagomorpha". Journal of Mammalogy 100 1 (2019): 31-44. https://researchportal.helsinki.fi/en/publications/90f49dec-00fa-4863-a1d6-c3f9d519680e.
    10.1093/jmammal/gyy186
  22. Lincoln Carneiro; Gustavo A. Bravo; Alexandre Aleixo. "Phenotypic similarity leads to taxonomic inconsistency". Zoologica Scripta 48 1 (2019): 46-56. https://researchportal.helsinki.fi/en/publications/4c3f08ab-db02-4497-b323-ce45ca5b29d3.
    10.1111/zsc.12324
  23. Tobias Andermann; Alexandre M. Fernandes; Urban Olsson; Mats Topel; Bernard Pfeil; Bengt Oxelman; Alexandre Aleixo; Brant C. Faircloth; Alexandre Antonelli. "Allele Phasing Greatly Improves the Phylogenetic Utility of Ultraconserved Elements". Systematic Biology 68 1 (2019): 32-46. https://researchportal.helsinki.fi/en/publications/2eace468-387f-43a9-a330-886a6363fbf4.
    10.1093/sysbio/syy039
  24. Camila C. Ribas; Alexandre Aleixo. "Diversity and evolution of Amazonian birds". Anais da Academia Brasileira de Ciências 91 (2019): https://researchportal.helsinki.fi/en/publications/8a6bf948-c18c-4215-9ea6-a98ce2e8c27b.
    10.1590/0001-3765201920190218
  25. Morgan Wirthlin; Nicholas C. B. Lima; Rafael Lucas Muniz Guedes; Andre E. R. Soares; Luiz Gonzaga P. Almeida; Nathalia P. Cavaleiro; Guilherme Loss de Morais; et al. "Parrot Genomes and the Evolution of Heightened Longevity and Cognition". Current Biology 28 24 (2018): 4001-+. https://researchportal.helsinki.fi/en/publications/e59fe198-3773-4a0a-8a25-d7d808685fcd.
    10.1016/j.cub.2018.10.050
  26. Mateus Ferreira; Alexandre M. Fernandes; Alexandre Aleixo; Alexandre Antonelli; Urban Olsson; John M. Bates; Joel Cracraft; Camila C. Ribas. "Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin". Molecular Phylogenetics and Evolution 129 (2018): 149-157. https://researchportal.helsinki.fi/en/publications/4030b1ce-8326-4f47-8b91-0a7d253843c9.
    10.1016/j.ympev.2018.07.007
  27. Talita Fernanda Augusto Ribas; Cleusa Yoshiko Nagamachi; Alexandre Aleixo; Melquizedec Luiz Silva Pinheiro; Patricia Caroline Mary O Brien; Malcolm Ferguson-Smith; Fengtang Yang; et al. "Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes.". Apollo - University of Cambridge Repository 13 8 (2018): https://researchportal.helsinki.fi/en/publications/f7f591a0-00af-4008-8171-ce00ba7348c2.
    10.17863/cam.33151
  28. Roxiris A. Azuaje-Rodríguez; Jason Weckstein; Janice H. Dispoto; Swati Patel; Joseph A. Cacioppo; John M. Bates; Sofia Marques Silva; Alexandre Aleixo. "Molecular systematics of the Amazonian endemic genus Hylexetastes (Aves: Dendrocolaptidae): taxonomic and conservation implications". Ibis 162 1 (2018): 119-136. https://researchportal.helsinki.fi/en/publications/b7946be1-ae1d-4bdf-bbec-eee2c0db2fbf.
    10.1111/ibi.12693
  29. Natalia Trujillo-Arias; Luciano Calderon; Fabricio R. Santos; Cristina Y. Miyaki; Alexandre Aleixo; Christopher C. Witt; Pablo L. Tubaro; Gustavo S. Cabanne. "Forest corridors between the central Andes and the southern Atlantic Forest enabled dispersal and peripatric diversification without niche divergence in a passerine". Molecular Phylogenetics and Evolution 128 (2018): 221-232. https://researchportal.helsinki.fi/en/publications/41f53403-0ad0-4029-851f-98f1331fc4f2.
    10.1016/j.ympev.2018.08.005
  30. Sofia Silva; Carlos Agne; Alexandre Aleixo; Sandro Bonatto. "Phylogeny and systematics of Chiroxiphia and Antilophia manakins (Ayes, Pipridae)". Molecular Phylogenetics and Evolution 127 (2018): 706-711. https://researchportal.helsinki.fi/en/publications/65b3f59d-b3fb-4c41-b530-8e5ab3b993b3.
    10.1016/j.ympev.2018.06.016
  31. Fabio Raposo do Amaral; Marcos Maldonado-Coelho; Alexandre Aleixo; Leilton W. Luna; Pericles Sena do Rego; Juliana Araripe; Thainara O. Souza; Weber A. G. Silva; Gregory Thom. "Recent chapters of Neotropical history overlooked in phylogeography". Molecular Ecology 27 20 (2018): 4108-4120. https://researchportal.helsinki.fi/en/publications/048ea6a9-07fa-4118-bbcb-c09fb40550a3.
    10.1111/mec.14843
  32. Cleyssian Dias; Keila de Araujo Lim; Juliana Araripe; Alexandre Aleixo; Marcelo Vallinoto; Iracilda Sampaio; Horacio Schneider; Pericles Sena do Rego. "Mitochondrial introgression obscures phylogenetic relationships among manakins of the genus Lepidothrix (Aves". Molecular Phylogenetics and Evolution 126 (2018): 314-320. https://researchportal.helsinki.fi/en/publications/81ed0a65-e78c-477d-b2b5-db919c717d0a.
    10.1016/j.ympev.2018.04.017
  33. Brian Tilston Smith; Robert W. Bryson; William M. Mauck; Jaime Chaves; Mark B. Robbins; Alexandre Aleixo; John Klicka. "Species delimitation and biogeography of the gnatcatchers and gnatwrens (Aves". Molecular Phylogenetics and Evolution 126 (2018): 45-57. https://researchportal.helsinki.fi/en/publications/2e1ce034-9823-4b7f-872a-295efa0d5a8a.
    10.1016/j.ympev.2018.03.012
  34. Pedro L. V. Peloso; Renan M. De Oliveira; Marcelo J. Sturaro; Miguel T. Rodrigues; Geraldo R. Lima-Filho; Youszef O. C. Bitar; Ward C. Wheeler; Alexandre Aleixo. "Phylogeny of Map Tree Frogs, Boana semilineata Species Group, with a New Amazonian Species (Anura: Hylidae)". South american journal of herpetology 13 2 (2018): 150-169. https://researchportal.helsinki.fi/en/publications/7d3885a0-a62a-4149-990b-2b40d8553aaf.
    10.2994/SAJH-D-17-00037.1
  35. Marcela G. M. Lima; Jose de Sousa e Silva-Junior; David Cerny; Janet C. Buckner; Alexandre Aleixo; Jonathan Chang; Jimmy Zheng; et al. "A phylogenomic perspective on the robust capuchin monkey (Sapajus) radiation". Molecular Phylogenetics and Evolution 124 (2018): 137-150. https://researchportal.helsinki.fi/en/publications/bbec6a5e-cf83-4dd5-926b-dcebbac85ea5.
    10.1016/j.ympev.2018.02.023
  36. Larissa Sampaio; Alexandre Aleixo; Horacio Schneider; Iracilda Sampaio; Juliana Araripe; Pericles Sena do Rego. "Molecular and plumage analyses indicate the incomplete separation of two woodpeckers (Aves, Picidae)". Zoologica Scripta 47 4 (2018): 418-427. https://researchportal.helsinki.fi/en/publications/9335c86d-1631-4d38-9302-03168b180276.
    10.1111/zsc.12287
  37. Paul Smith; J. Fernando Pacheco; Glayson Ariel Bencke; Alexandre Aleixo. "Senior synonyms for three Neotropical birds described by Louis Vieillot based on Felix de Azara (Passeriformes: Thraupidae, Tyrannidae, Tityridae)". Zootaxa 4433 1 (2018): 141-150. https://researchportal.helsinki.fi/en/publications/8019e14c-cedf-47be-9360-d6403c4dfc13.
    10.11646/zootaxa.4433.1.8
  38. Renato Caparroz; Amanda V. Rocha; Gustavo S. Cabanne; Pablo Tubaro; Alexandre Aleixo; Emily M. Lemmon; Alan R. Lemmon. "Mitogenomes of two neotropical bird species and the multiple independent origin of mitochondrial gene orders in Passeriformes". Molecular Biology Reports 45 3 (2018): 279-285. https://researchportal.helsinki.fi/en/publications/0d390413-8a99-4652-8457-6f4c232153aa.
    10.1007/s11033-018-4160-5
  39. Carina Carneiro de Melo Moura; Helder F. P. de Araujo; Alexandre Aleixo; Michael Wink; Alexandre M. Fernandes. "The role of landscape change and paleoclimatic events in shaping the evolutionary history of the Polioptila gnatcatchers (Passeriformes, Polioptilidae) with emphasis on species associated with open habitats". Journal of Avian Biology 49 5 (2018): https://researchportal.helsinki.fi/en/publications/346dbc28-01cb-46d6-9579-69969a5b6714.
    10.1111/jav.01692
  40. Camila C. Ribas; Alexandre Aleixo; Chrysoula Gubili; Fernando M. d'Horta; Robb T. Brumfield; Joel Cracraft. "Biogeography and diversification of Rhegmatorhina (Aves: Thamnophilidae)". Journal of Biogeography 45 4 (2018): 917-928. https://researchportal.helsinki.fi/en/publications/e9d484e1-80e1-4a51-b4b8-88ebf65bf887.
    10.1111/jbi.13169
  41. Paola Pulido-Santacruz; Alexandre Aleixo; Jason T. Weir. "Morphologically cryptic Amazonian bird species pairs exhibit strong postzygotic reproductive isolation". Proceedings of the Royal Society B. Biological Sciences 285 1874 (2018): https://researchportal.helsinki.fi/en/publications/336c7d31-d208-4f21-854f-0ced41d59f61.
    10.1098/rspb.2017.2081
  42. Lincoln Carneiro; Gustavo A. Bravo; Natalia Aristizabal; Andres M. Cuervo; Alexandre Aleixo. "Molecular systematics and biogeography of lowland antpittas (Aves, Grallariidae)". Molecular Phylogenetics and Evolution 120 (2018): 375-389. https://researchportal.helsinki.fi/en/publications/010753c7-fd4b-4271-9d6e-1c1161781326.
    10.1016/j.ympev.2017.11.019
  43. Alfredo O. Barrera-Guzman; Alexandre Aleixo; Matthew D. Shawkey; Jason T. Weir. "Hybrid speciation leads to novel male secondary sexual ornamentation of an Amazonian bird". Proceedings of the National Academy of Sciences of the United States of America 115 2 (2018): E218-E225. https://researchportal.helsinki.fi/en/publications/8c91a128-e00d-4fb4-986a-b47d1ae5a197.
    10.1073/pnas.1717319115
  44. Nicholas Costa Barroso Lima; Andre Elias Rodrigues Soares; Luiz Gonzaga de Paula Almeida; Igor Rodrigues da Costa; Fernanda Midori Sato; Patricia Schneider; Alexandre Aleixo; et al. "Comparative mitogenomic analyses of Amazona parrots and Psittaciformes". Genetics and Molecular Biology 41 3 (2018): 593-604. https://researchportal.helsinki.fi/en/publications/a8e7db03-6e8d-4429-96db-cc44cfad3587.
    10.1590/1678-4685-GMB-2017-0023
  45. Michael G. Harvey; Alexandre Aleixo; Camila C. Ribas; Robb T. Brumfield. "Habitat Association Predicts Genetic Diversity and Population Divergence in Amazonian Birds". American Naturalist 190 5 (2017): 631-648. https://researchportal.helsinki.fi/en/publications/67305c5a-14fb-431a-80e0-573005e5c064.
    10.1086/693856
  46. Túlio Dornas; Dianes Gomes Marcelino; Sidnei de Melo Dantas; Renato Torres Pinheiro; Alexandre Aleixo. "Range extension and conservation of Psophia interjecta Griscom & Greenway, 1937 (Aves: Psophidae) in the Tocantins–Araguaia interfluve, state of Tocantins, Brazil". Check List 13 4 (2017): 141-146. https://doi.org/10.15560%2F13.4.141.
    10.15560/13.4.141
  47. Alexandre, Aleixo. "The niche and phylogeography of a passerine reveal the history of biological diversification between the Andean and the Atlantic forests.". Molecular phylogenetics and evolution (2017): http://europepmc.org/abstract/med/28385604.
    10.1016/j.ympev.2017.03.025
  48. Sidnei de Melo Dantas; Leonardo de Sousa Miranda; Andre Luis Ravetta; Alexandre Aleixo. "A new population of the White Bellbird Procnias albus (Hermann, 1783) from lowland southern Brazilian Amazonia, with comments on genetic variation in bellbirds". Ararajuba 25 1 (2017): 71-74. https://researchportal.helsinki.fi/en/publications/cf6ba5e8-8107-4533-b004-e7652411958a.
  49. Alexandre, Aleixo. "The assembly and annotation of the complete Rufous-bellied thrush mitochondrial genome.". Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis (2017): http://europepmc.org/abstract/med/26679427.
    10.3109/19401736.2015.1115855
  50. Marcela G. M. Lima; Janet C. Buckner; José de Sousa e Silva-Júnior; Alexandre Aleixo; Amely B. Martins; Jean P. Boubli; Andrés Link; et al. "Capuchin monkey biogeography: understanding Sapajus Pleistocene range expansion and the current sympatry between Cebus and Sapajus". Journal of Biogeography 44 4 (2017): 810-820. https://doi.org/10.1111%2Fjbi.12945.
    10.1111/jbi.12945
  51. Juan I. Areta; Tulio Dornas; Guy M. Kirwan; Lucas Eduardo Araujo-Silva; Alexandre Aleixo. "Mixing the waters". Emu 117 1 (2017): 40-50. https://researchportal.helsinki.fi/en/publications/17351c36-789e-44d9-84b3-fcd67f7b1d0c.
    10.1080/01584197.2016.1266447
  52. Fecchio, A.; Pinheiro, R.; Felix, G.; Faria, I.P.; Pinho, J.B.; Lacorte, G.A.; Braga, E.M.; et al. "Host community similarity and geography shape the diversity and distribution of haemosporidian parasites in Amazonian birds". Ecography (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85019147742&partnerID=MN8TOARS.
    10.1111/ecog.03058
  53. Ferreira, M.; Aleixo, A.; Ribas, C.C.; Santos, M.P.D.. "Biogeography of the Neotropical genus Malacoptila (Aves: Bucconidae): the influence of the Andean orogeny, Amazonian drainage evolution and palaeoclimate". Journal of Biogeography 44 4 (2017): 748-759. http://www.scopus.com/inward/record.url?eid=2-s2.0-84996542684&partnerID=MN8TOARS.
    10.1111/jbi.12888
  54. Araújo-Silva, L.E.; Miranda, L.S.; Carneiro, L.; Aleixo, A.. "Phylogeography and diversification of an Amazonian understorey hummingbird: Paraphyly and evidence for widespread cryptic speciation in the Plio-Pleistocene". Ibis (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85024387608&partnerID=MN8TOARS.
    10.1111/ibi.12500
  55. Alexandre, Aleixo; Tom P. Bregman; Alexander C. Lees; Hannah E. A. MacGregor; Bianca Darski; Nárgila G. de Moura; Alexandre Aleixo; Jos Barlow; Joseph A. Tobias. "Using avian functional traits to assess the impact of land-cover change on ecosystem processes linked to resilience in tropical forests.". Proceedings. Biological sciences 283 1844 (2016): 20161289-20161289. http://europepmc.org/abstract/med/27928045.
    10.1098/rspb.2016.1289
  56. Pablo Vieira Cerqueira; Marcos Pérsio Dantas Santos; Alexandre Aleixo. "Phylogeography, inter-specific limits and diversification of Turdus ignobilis (Aves: Turdidae)". Molecular Phylogenetics and Evolution 97 (2016): 177-186. https://doi.org/10.1016%2Fj.ympev.2016.01.005.
    10.1016/j.ympev.2016.01.005
  57. Sidnei M. Dantas; Jason D. Weckstein; John M. Bates; Niels K. Krabbe; Carlos Daniel Cadena; Mark B. Robbins; Eugenio Valderrama; Alexandre Aleixo. "Molecular systematics of the new world screech-owls ( Megascops : Aves, Strigidae): biogeographic and taxonomic implications". Molecular Phylogenetics and Evolution 94 (2016): 626-634. https://doi.org/10.1016%2Fj.ympev.2015.09.025.
    10.1016/j.ympev.2015.09.025
  58. Borges, S.H.; Cornelius, C.; Ribas, C.; Almeida, R.; Guilherme, E.; Aleixo, A.; Dantas, S.; Dos Santos, M.P.; Moreira, M.. "What is the avifauna of Amazonian white-sand vegetation?". Bird Conservation International 26 2 (2016): 192-204. http://www.scopus.com/inward/record.url?eid=2-s2.0-84943311241&partnerID=MN8TOARS.
    10.1017/S0959270915000052
  59. Ceríaco, L.M.P.; Gutiérrez, E.E.; Dubois, A.; Abdala, C.S.; Alqarni, A.S.; Adler, K.; Adriano, E.A.; et al. "Photography-based taxonomy is inadequate, unnecessary, and potentially harmful for biological sciences". Zootaxa 4196 3 (2016): 435-445. http://www.scopus.com/inward/record.url?eid=2-s2.0-84999114897&partnerID=MN8TOARS.
    10.11646/zootaxa.4196.3.9
  60. Ferreira, G.G.; Aleixo, A.; Silva, S.M.. "Systematic review of the Cinnamon-throated Woodcreeper Dendrexetastes rufigula (Aves: Dendrocolaptidae) based on a multilocus phylogeography". Revista Brasileira de Ornitologia 24 4 (2016): 358-369. http://www.scopus.com/inward/record.url?eid=2-s2.0-85013498056&partnerID=MN8TOARS.
  61. Nárgila G. Moura; Alexander C. Lees; Alexandre Aleixo; Jos Barlow; Erika Berenguer; Joice Ferreira; Ralph Mac Nally; James R. Thomson; Toby A. Gardner. "Idiosyncratic responses of Amazonian birds to primary forest disturbance". Oecologia 180 3 (2015): 903-916. https://doi.org/10.1007%2Fs00442-015-3495-z.
    10.1007/s00442-015-3495-z
  62. Tom P. Bregman; Alexander C. Lees; Nathalie Seddon; Hannah E. A. MacGregor; Bianca Darski; Alexandre Aleixo; Michael B. Bonsall; Joseph A. Tobias. "Species interactions regulate the collapse of biodiversity and ecosystem function in tropical forest fragments". Ecology 96 10 (2015): 2692-2704. https://doi.org/10.1890%2F14-1731.1.
    10.1890/14-1731.1
  63. Jamily L.R. de Lima; Fabricio A. Soares; Ana C.S. Remedios; Gregory Thom; Morgan Wirthlin; Alexandre Aleixo; Maria Paula C. Schneider; et al. "A putative RA-like region in the brain of the scale-backed antbird, Willisornis poecilinotus (Furnariides, Suboscines, Passeriformes, Thamnophilidae)". Genetics and Molecular Biology 38 3 (2015): 249-254. https://doi.org/10.1590%2Fs1415-475738320150010.
    10.1590/s1415-475738320150010
  64. SÉRGIO HENRIQUE BORGES; CINTIA CORNELIUS; CAMILA RIBAS; RICARDO ALMEIDA; EDSON GUILHERME; ALEXANDRE ALEIXO; SIDNEI DANTAS; MARCOS PÉRSIO DOS SANTOS; MARCELO MOREIRA. "What is the avifauna of Amazonian white-sand vegetation?". Bird Conservation International 26 02 (2015): 192-204. https://doi.org/10.1017%2Fs0959270915000052.
    10.1017/s0959270915000052
  65. Alexandre, Aleixo. "Hybridization in headwater regions, and the role of rivers as drivers of speciation in Amazonian birds.". Evolution; international journal of organic evolution (2015): http://europepmc.org/abstract/med/26095719.
    10.1111/evo.12696
  66. Tainá C. Rocha; Fernando Sequeira; Alexandre Aleixo; Péricles S. Rêgo; Iracilda Sampaio; Horacio Schneider; Marcelo Vallinoto. "Molecular phylogeny and diversification of a widespread Neotropical rainforest bird group: The Buff-throated Woodcreeper complex, Xiphorhynchus guttatus/susurrans (Aves: Dendrocolaptidae)". Molecular Phylogenetics and Evolution 85 (2015): 131-140. https://doi.org/10.1016%2Fj.ympev.2015.02.004.
    10.1016/j.ympev.2015.02.004
  67. Alexandre, Aleixo. "Cryptic speciation in the white-shouldered antshrike (Thamnophilus aethiops, Aves - Thamnophilidae): the tale of a transcontinental radiation across rivers in lowland Amazonia and the northeastern Atlantic Forest.". Molecular phylogenetics and evolution (2015): http://europepmc.org/abstract/med/25291073.
    10.1016/j.ympev.2014.09.023
  68. Piacentini, V.Q.; Aleixo, A.; Agne, C.E.; Maurício, G.N.; Pacheco, J.F.; Brav, G.A.; Brito, G.R.R.; et al. "Annotated checklist of the birds of Brazil by the Brazilian ornithological records committee | Lista comentada das aves do Brasil pelo comite Brasileiro de registros ornitologicos". Revista Brasileira de Ornitologia 23 2 (2015): 91-298. http://www.scopus.com/inward/record.url?eid=2-s2.0-84955585286&partnerID=MN8TOARS.
  69. Bregman, T.P.; Lees, A.C.; Seddon, N.; Macgregor, H.E.A.; Darski, B.; Aleixo, A.; Bonsall, M.B.; Tobias, J.A.. "Species interactions regulate the collapse of biodiversity and ecosystem function in tropical forest fragments". Ecology 96 10 (2015): 2692-2704. http://www.scopus.com/inward/record.url?eid=2-s2.0-84944097143&partnerID=MN8TOARS.
    10.1890/14-1731.1.sm
  70. Brian Tilston Smith; John E. McCormack; Andrés M. Cuervo; Michael. J. Hickerson; Alexandre Aleixo; Carlos Daniel Cadena; Jorge Pérez-Emán; et al. "The drivers of tropical speciation". Nature 515 7527 (2014): 406-409. https://doi.org/10.1038%2Fnature13687.
    10.1038/nature13687
  71. Alexandre, Aleixo. "Specimen collection: an essential tool.". Science (New York, N.Y.) (2014): http://europepmc.org/abstract/med/24855245.
    10.1126/science.344.6186.814
  72. Alexandre M. Fernandes; Michael Wink; Carla H. Sardelli; Alexandre Aleixo; Malte Ebach. "Multiple speciation across the Andes and throughout Amazonia: the case of the spot-backed antbird species complex (Hylophylax naevius/Hylophylax naevioides)". Journal of Biogeography 41 6 (2014): 1094-1104. https://doi.org/10.1111%2Fjbi.12277.
    10.1111/jbi.12277
  73. Lees, A.C.; Naka, L.N.; Aleixo, A.; Cohn-Haft, M.; Piacentini, V.Q.; Santos, M.P.D.; Silveira, L.F.. "Conducting rigorous avian inventories: Amazonian case studies and a roadmap for improvement". Revista Brasileira de Ornitologia 22 2 (2014): 107-120. http://www.scopus.com/inward/record.url?eid=2-s2.0-84903939985&partnerID=MN8TOARS.
  74. Serpa, G.A.; Malacco, G.B.; Aleixo, A.; Darski-Silva, B.; Madeira, S.. "Range extension of the known distribution of the black-backed grosbeak, pheucticus aureoventris (passeriformes: Cardinalidae) in brazil, with the first records for the states of Rondônia, Amazonas and Goiás". Revista Brasileira de Ornitologia 22 1 (2014): 38-41. http://www.scopus.com/inward/record.url?eid=2-s2.0-84899828851&partnerID=MN8TOARS.
  75. Nárgila G. Moura; Alexander C. Lees; Christian B. Andretti; Bradley J.W. Davis; Ricardo R.C. Solar; Alexandre Aleixo; Jos Barlow; Joice Ferreira; Toby A. Gardner. "Avian biodiversity in multiple-use landscapes of the Brazilian Amazon". Biological Conservation 167 (2013): 339-348. https://doi.org/10.1016%2Fj.biocon.2013.08.023.
    10.1016/j.biocon.2013.08.023
  76. Tiago Sousa-Neves; Alexandre Aleixo; Fernando Sequeira. "Cryptic patterns of diversification of a widespread Amazonian Woodcreeper species complex (Aves: Dendrocolaptidae) inferred from multilocus phylogenetic analysis: Implications for historical biogeography and taxonomy". Molecular Phylogenetics and Evolution 68 3 (2013): 410-424. https://doi.org/10.1016%2Fj.ympev.2013.04.018.
    10.1016/j.ympev.2013.04.018
  77. Alexandre, Aleixo; Gardner, T.A.; Ferreira, J.; Barlow, J.; Lees, A.C.; Parry, L.; Vieira, I.C.; et al. "A social and ecological assessment of tropical land uses at multiple scales: the Sustainable Amazon Network.". Philosophical transactions of the Royal Society of London. Series B, Biological sciences 368 1624 (2013): http://europepmc.org/abstract/med/23610172.
    10.1098/rstb.2012.0166
  78. João Marcos G. Capurucho; Cintia Cornelius; Sergio Henrique Borges; Mario Cohn-Haft; Alexandre Aleixo; Jean Paul Metzger; Camila C. Ribas. "Combining phylogeography and landscape genetics ofXenopipo atronitens(Aves: Pipridae), a white sandcampinaspecialist, to understand Pleistocene landscape evolution in Amazonia". Biological Journal of the Linnean Society 110 1 (2013): 60-76. https://doi.org/10.1111%2Fbij.12102.
    10.1111/bij.12102
  79. Alexandre M. Fernandes; Javier Gonzalez; Michael Wink; Alexandre Aleixo. "Multilocus phylogeography of the Wedge-billed Woodcreeper Glyphorynchus spirurus (Aves, Furnariidae) in lowland Amazonia: Widespread cryptic diversity and paraphyly reveal a complex diversification pattern". Molecular Phylogenetics and Evolution 66 1 (2013): 270-282. https://doi.org/10.1016%2Fj.ympev.2012.09.033.
    10.1016/j.ympev.2012.09.033
  80. Lorena de Sousa Azevedo; Alexandre Aleixo; Marcos Pérsio Dantas Santos; Iracilda Sampaio; Horacio Schneider; Marcelo Vallinoto; Péricles Sena do Rêgo. "New molecular evidence supports the species status of Kaempfer's Woodpecker (Aves, Picidae)". Genetics and Molecular Biology 36 2 (2013): 192-200. https://doi.org/10.1590%2Fs1415-47572013005000022.
    10.1590/s1415-47572013005000022
  81. Holly L. Lutz; Jason D. Weckstein; José S.L. Patané; John M. Bates; Alexandre Aleixo. "Biogeography and spatio-temporal diversification of Selenidera and Andigena Toucans (Aves: Ramphastidae)". Molecular Phylogenetics and Evolution 69 3 (2013): 873-883. https://doi.org/10.1016%2Fj.ympev.2013.06.017.
    10.1016/j.ympev.2013.06.017
  82. Lees, A.C.; de Moura, N.G.; Andretti, C.B.; Davis, B.J.W.; Lopes, E.V.; Magalli Pinto Henriques, L.; Aleixo, A.; et al. "One hundred and thirty-five years of avifaunal surveys around Santarém, central Brazilian Amazon". Revista Brasileira de Ornitologia 21 1 (2013): 16-57. http://www.scopus.com/inward/record.url?eid=2-s2.0-84877743462&partnerID=MN8TOARS.
  83. de Sousa Azevedo, L.; Aleixo, A.; Santos, M.P.D.; Sampaio, I.; Schneider, H.; Vallinoto, M.; do Rêgo, P.S.. "New molecular evidence supports the species status of Kaempfer's Woodpecker (Aves, Picidae)". Genetics and Molecular Biology 36 2 (2013): 192-200. http://www.scopus.com/inward/record.url?eid=2-s2.0-84879062190&partnerID=MN8TOARS.
    10.1590/S1415-47572013005000022
  84. Alexandre, Aleixo. "Correlated evolution of beak morphology and song in the neotropical woodcreeper radiation.". Evolution; international journal of organic evolution (2012): http://europepmc.org/abstract/med/22946803.
    10.1111/j.1558-5646.2012.01642.x
  85. Alexandre M. Fernandes; Michael Wink; Alexandre Aleixo. "Phylogeography of the chestnut-tailed antbird (Myrmeciza hemimelaena) clarifies the role of rivers in Amazonian biogeography". Journal of Biogeography 39 8 (2012): 1524-1535. https://doi.org/10.1111%2Fj.1365-2699.2012.02712.x.
    10.1111/j.1365-2699.2012.02712.x
  86. Lincoln Silva Carneiro; Luiz Pedreira Gonzaga; Péricles S. Rêgo; Iracilda Sampaio; Horacio Schneider; Alexandre Aleixo. "Systematic revision of the Spotted Antpitta (Grallariidae:Hylopezus macularius), with description of a cryptic new species from Brazilian Amazonia". The Auk 129 2 (2012): 338-351. https://doi.org/10.1525%2Fauk.2012.11157.
    10.1525/auk.2012.11157
  87. Alexandre, Aleixo. "A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years.". Proceedings. Biological sciences (2012): http://europepmc.org/abstract/med/21795268.
    10.1098/rspb.2011.1120
  88. Lees, A.C.; de Moura, N.G.; Santana, A.; Aleixo, A.; Barlow, J.; Berenguer, E.; Ferreira, J.; Gardner, T.A.. "Paragominas: A quantitative baseline inventory of an eastern Amazonian avifauna". Revista Brasileira de Ornitologia 20 2 (2012): 93-118. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867054719&partnerID=MN8TOARS.
  89. Elizabeth P. Derryberry; Santiago Claramunt; Graham Derryberry; R. Terry Chesser; Joel Cracraft; Alexandre Aleixo; Jorge Pérez-Emán; J. V. Remsen Jr.; Robb T. Brumfield. "LINEAGE DIVERSIFICATION AND MORPHOLOGICAL EVOLUTION IN A LARGE-SCALE CONTINENTAL RADIATION: THE NEOTROPICAL OVENBIRDS AND WOODCREEPERS (AVES: FURNARIIDAE)". Evolution 65 10 (2011): 2973-2986. https://doi.org/10.1111%2Fj.1558-5646.2011.01374.x.
    10.1111/j.1558-5646.2011.01374.x
  90. Philip C Stouffer; Kristina L. Cockle; Alexandre Aleixo; Juan I. Areta; Juan Mazar Barnett; Alejandro Bodrati; Carlos Daniel Cadena; et al. "No evidence for widespread bird declines in protected South American forests". Climatic Change 108 1-2 (2011): 383-386. https://doi.org/10.1007%2Fs10584-011-0162-1.
    10.1007/s10584-011-0162-1
  91. Swati Patel; Jason D. Weckstein; José S.L. Patané; John M. Bates; Alexandre Aleixo. "Temporal and spatial diversification of Pteroglossus araçaris (AVES: Ramphastidae) in the neotropics: Constant rate of diversification does not support an increase in radiation during the Pleistocene". Molecular Phylogenetics and Evolution 58 1 (2011): 105-115. https://doi.org/10.1016%2Fj.ympev.2010.10.016.
    10.1016/j.ympev.2010.10.016
  92. Santos, M.P.D.; Aleixo, A.. "Foreword". Revista Brasileira de Ornitologia 19 2 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-79960745829&partnerID=MN8TOARS.
  93. Santos, M.P.D.; Aleixo, A.; d'Horta, F.M.; Portes, C.E.B.. "Avifauna of the Juruti Region, Pará, Brazil | Avifauna da região do juruti, Pará, Brasil". Revista Brasileira de Ornitologia 19 2 (2011): 134-153. http://www.scopus.com/inward/record.url?eid=2-s2.0-79960733533&partnerID=MN8TOARS.
  94. Portes, C.E.B.; Carneiro, L.S.; Schunck, F.; de Sousa e Silva, M.S.; Zimmer, K.J.; Whittaker, A.; Poletto, F.; Silveira, L.F.; Aleixo, A.. "Annotated checklist of birds recorded between 1998 and 2009 at nine areas in the belém area of endemism, with notes on some range extensions and the conservation status of endangered species | Lista anotada de aves registradas entre 1998 e 2009 em nove áreas do centro de endemismo Belém, com notas sobre algumas extensóes de distribuição e o status de conservaçáo de algumas espécies ameaçadas.". Revista Brasileira de Ornitologia 19 2 (2011): 167-184. http://www.scopus.com/inward/record.url?eid=2-s2.0-79960717752&partnerID=MN8TOARS.
  95. Alexandre Aleixo; Terry Chesser; Jr, Remsen; Robb T. Brumfield. "Pseudasthenes, A New Genus Of Ovenbird (Aves: Passeriformes: Furnariidae)". Zenodo (2010):
    10.5281/zenodo.294042
  96. Elizabeth Derryberry; Santiago Claramunt; Terry Chesser; Alexandre Aleixo; Joel Cracraft; Robert G. Moyle; Robb T. Brumfield. "Certhiasomus, A New Genus Of Woodcreeper (Aves: Passeriformes: Dendrocolaptidae)". Zenodo (2010):
    10.5281/zenodo.293912
  97. Alexandre Aleixo. "ZoologyA Field Guide to the Birds of Brazil.ByBervanPerlo. Oxford and New York: Oxford University Press. $149.00 (hardcover); $39.95 (paper). xiii 465 p.; ill.; index. ISBN: 9780195301540 (hc); 9780195301557 (pb). 2009.". The Quarterly Review of Biology 85 3 (2010): 376-377. https://doi.org/10.1086%2F655090.
    10.1086/655090
  98. Santiago Claramunt; Elizabeth P. Derryberry; R. Terry Chesser; Alexandre Aleixo; Robb T. Brumfield. "Polyphyly ofCampylorhamphus, and Description of a New Genus forC. pucherani(Dendrocolaptinae)". The Auk 127 2 (2010): 430-439. https://doi.org/10.1525%2Fauk.2009.09022.
    10.1525/auk.2009.09022
  99. Evonnildo C. Gonçalves; Stephen F. Ferrari; Heitor B. Bastos; Anita Wajntal; Alexandre Aleixo; Maria Paula C. Schneider. "Comparative Genetic Diversity of Wild and Captive Populations of the Bare-Faced Curassow (Crax fasciolata) Based on Cross-Species Microsatellite Markers: Implications for Conservation and Management". Biochemical Genetics 48 5-6 (2010): 472-479. https://doi.org/10.1007%2Fs10528-010-9330-7.
    10.1007/s10528-010-9330-7
  100. Alexandre Aleixo; Ana Luisa Albernaz; Carlos Eduardo Viveiros Grelle; Mariana Moncassim Vale; Thiago Fernando Rangel. "Mudanças Climáticas e a Biodiversidade dos Biomas Brasileiros: Passado, Presente e Futuro". Natureza & Conservação 08 02 (2010): 194-196. https://doi.org/10.4322%2Fnatcon.00802016.
    10.4322/natcon.00802016
  101. Derryberry, E.; Claramunt, S.; O'Quin, K.E.; Aleixo, A.; Chesser, R.T.; Remsen Jr., J.V.; Brumfield, R.T.. "Pseudasthenes, a new genus of ovenbird (aves: passeriformes: furnariidae)". Zootaxa 2416 (2010): 61-68. http://www.scopus.com/inward/record.url?eid=2-s2.0-77953948366&partnerID=MN8TOARS.
  102. Derryberry, E.; Claramunt, S.; Chesser, R.T.; Aleixo, A.; Cracraft, J.; Moyle, R.G.; Brumfield, R.T.. "Certhiasomus, a new genus of woodcreeper (aves: passeriformes: dendrocolaptidae)". Zootaxa 2416 (2010): 44-50. http://www.scopus.com/inward/record.url?eid=2-s2.0-77953956745&partnerID=MN8TOARS.
  103. Carlos Eduardo Portes; Alexandre Aleixo. "Campylorhamphus procurvoides successor (Aves: Dendrocolaptidae) is a junior synonym of Campylorhamphus trochilirostris notabilis". Zoologia (Curitiba) 26 3 (2009): 547-552. https://doi.org/10.1590%2Fs1984-46702009000300019.
    10.1590/s1984-46702009000300019
  104. Vítor de Q. Piacentini; Alexandre Aleixo; Luís F. Silveira. "Hybrid, Subspecies, or Species? The Validity and Taxonomic Status ofPhaethornis longuemareus aethopygaZimmer, 1950 (Trochilidae)". The Auk 126 3 (2009): 604-612. https://doi.org/10.1525%2Fauk.2009.08130.
    10.1525/auk.2009.08130
  105. Alexandre Aleixo; Tibério C. T. Burlamaqui; M. Paula C. Schneider; Evonnildo C. Gonçalves. "Molecular Systematics and Plumage Evolution in the Monotypic Obligate Army-Ant-Following GenusSkutchia(Thamnophilidae)". The Condor 111 2 (2009): 382-387. https://doi.org/10.1525%2Fcond.2009.080097.
    10.1525/cond.2009.080097
  106. Portes, C.E.; Aleixo, A.. "Campylorhamphus procurvoides successor (Aves: Dendrocolaptidae) is a junior synonym of campylorhamphus trochilirostris notabilis". Zoologia 26 3 (2009): 547-552. http://www.scopus.com/inward/record.url?eid=2-s2.0-79954515224&partnerID=MN8TOARS.
    10.1590/S1984-46702009000300019
  107. José S.L. Patané; Jason D. Weckstein; Alexandre Aleixo; John M. Bates. "Evolutionary history of Ramphastos toucans: Molecular phylogenetics, temporal diversification, and biogeography". Molecular Phylogenetics and Evolution 53 3 (2009): 923-934. https://doi.org/10.1016%2Fj.ympev.2009.08.017.
    10.1016/j.ympev.2009.08.017
  108. Aleixo, A.. "The position of core of taxonomy of the Brazilian Committee of Ornithological Records (CBRO) on the validity of nomenclatural Synallaxis whitneyi Pacheco and Gonzaga, 1995 | A posição do núcleo de taxonomia do comitë brasileiro de registros ornitolo ´gicos (cbro) sobre a validade nomenclatural de synallaxis whitneyi pacheco e gonzaga, 1995". Revista Brasileira de Ornitologia 16 4 (2008): 412-414. http://www.scopus.com/inward/record.url?eid=2-s2.0-78650373557&partnerID=MN8TOARS.
  109. Tobias, J.A.; Lebbin, D.J.; Aleixo, A.; Andersen, M.J.; Guilherme, E.; Hosner, P.A.; Seddon, N.. "Distribution, behavior, and conservation status of the Rufous Twistwing (Cnipodectes superrufus)". Wilson Journal of Ornithology 120 1 (2008): 38-49. http://www.scopus.com/inward/record.url?eid=2-s2.0-41349104300&partnerID=MN8TOARS.
    10.1676/06-088.1
  110. Guilherme, E.; Aleixo, A.. "On the first records of Xiphorhynchus chunchotambo (Tschudi, 1844) (Dendrocolaptidae) for Brazil | Primeiros registros de Xiphorhynchus chunchotambo (Tschudi, 1844) (Dendrocolaptidae) no Brasil". Revista Brasileira de Ornitologia 16 1 (2008): 44-46. http://www.scopus.com/inward/record.url?eid=2-s2.0-56449110142&partnerID=MN8TOARS.
  111. Alexandre Aleixo; Dilce de Fátima Rossetti. "Avian gene trees, landscape evolution, and geology: towards a modern synthesis of Amazonian historical biogeography?". Journal of Ornithology 148 S2 (2007): 443-453. https://doi.org/10.1007%2Fs10336-007-0168-7.
    10.1007/s10336-007-0168-7
  112. Luiz dos Anjos; Graziele H. Volpato; Edson V. Lopes; Patrícia P. Serafini; Fabíola Poletto; Alexandre Aleixo. "The importance of riparian forest for the maintenance of bird species richness in an Atlantic Forest remnant, southern Brazil". Revista Brasileira de Zoologia 24 4 (2007): 1078-1086. https://doi.org/10.1590%2Fs0101-81752007000400027.
    10.1590/s0101-81752007000400027
  113. Alexandre Aleixo; Fabíola Poletto. "BIRDS OF AN OPEN VEGETATION ENCLAVE IN SOUTHERN BRAZILIAN AMAZONIA". The Wilson Journal of Ornithology 119 4 (2007): 610-630. https://doi.org/10.1676%2F06-153.1.
    10.1676/06-153.1
  114. Aleixo, A.; Straube, F.C.. "A survey of Brazilian ornithological collections: Current status and perspectives | Coleções de aves brasileiras: Breve histórico, diagnóstico atual e perspectivas para o futuro". Revista Brasileira de Ornitologia 15 2 (2007): 315-324. http://www.scopus.com/inward/record.url?eid=2-s2.0-51849087828&partnerID=MN8TOARS.
  115. Aleixo, A.. "Species concepts and the ever lasting conflict between continuity and operationality: A proposal of guidelines for assigning species rank by the Brazilian Check-list Committee | Conceitos de espécie e o eterno conflito entre continuidade e operacionalidade: Uma proposta de normatização de critérios para o reconhecimento de espécies pelo Comitê Brasileiro de Registros Ornitológicos". Revista Brasileira de Ornitologia 15 2 (2007): 297-310. http://www.scopus.com/inward/record.url?eid=2-s2.0-51849088286&partnerID=MN8TOARS.
  116. Dos Anjos, L.; Volpato, G.H.; Lopes, E.V.; Serafini, P.P.; Poletto, F.; Aleixo, A.. "The importance of riparian forest for the maintenance of bird species richness in an Atlantic Forest remnant, southern Brazil". Revista Brasileira de Zoologia 24 4 (2007): 1078-1086. http://www.scopus.com/inward/record.url?eid=2-s2.0-40849126702&partnerID=MN8TOARS.
    10.1590/S0101-81752007000400027
  117. Alexandre, Aleixo. "Historical diversification of floodplain forest specialist species in the Amazon: a case study with two species of the avian genus Xiphorhynchus (Aves: Dendrocolaptidae)". Biological journal of the Linnean Society. Linnean Society of London (2006): http://europepmc.org/abstract/AGR/IND43835959.
    10.1111/j.1095-8312.2006.00703.x
  118. Aleixo, A.; Pacheco, J.F.. "A family name for the monotypic oscine passerine genus Donacobius". Revista Brasileira de Ornitologia 14 2 (2006): 172-173. http://www.scopus.com/inward/record.url?eid=2-s2.0-52049109189&partnerID=MN8TOARS.
  119. F Poletto; Alexandre Aleixo. "Biogeographic implications of new avian records from a patch of white-sand forest in southwestern Brazilian Amazonia". Revista brasileira de zoologia 22 4 (2005): 1196-1200. https://researchportal.helsinki.fi/en/publications/027b98c8-d419-4b8d-8695-d980ae2fb160.
    10.1590/S0101-81752005000400055
  120. Fabíola Poletto; Alexandre Aleixo. "Implicações biogeográficas de novos registros ornitológicos em um enclave de vegetação de campina no sudoeste da Amazônia brasileira". Revista Brasileira de Zoologia 22 4 (2005): 1196-1200. https://doi.org/10.1590%2Fs0101-81752005000400055.
    10.1590/s0101-81752005000400055
  121. Guilherme, E.; Aleixo, A.; Guimarães, J.D.O.; Dias, P.R.D.F.; Do Amaral, P.P.; Zamora, L.M.; De Souza, M.S.. "First record of Phoenicoparrus jamesi (Aves, Phoenicopteriformes) for Brazil | Primeiro registro de Phoenicoparrus jamesi (Aves, Phoenicopteriformes) para o Brasil". Revista Brasileira de Ornitologia 13 2 (2005): 212-214. http://www.scopus.com/inward/record.url?eid=2-s2.0-52049085834&partnerID=MN8TOARS.
  122. Alexandre, Aleixo. "Historical diversification of a terra-firme forest bird superspecies: a phylogeographic perspective on the role of different hypotheses of Amazonian diversification.". Evolution; international journal of organic evolution (2004): http://europepmc.org/abstract/med/15266979.
    10.1111/j.0014-3820.2004.tb01709.x
  123. Alexandre Aleixo. "HISTORICAL DIVERSIFICATION OF A TERRA-FIRME FOREST BIRD SUPERSPECIES: A PHYLOGEOGRAPHIC PERSPECTIVE ON THE ROLE OF DIFFERENT HYPOTHESES OF AMAZONIAN DIVERSIFICATION". Evolution 58 6 (2004): 1303-1303. https://doi.org/10.1554%2F03-158.
    10.1554/03-158
  124. Alexandre Aleixo. "Molecular Systematics and the Role of the "Várzea"-"Terra-Firme" Ecotone in the Diversification of Xiphorhynchus Woodcreepers (Aves: Dendrocolaptidae)". The Auk 119 3 (2002): 621-640. https://doi.org/10.2307%2F4089963.
    10.2307/4089963
  125. Alexandre Aleixo; Bret M. Whitney. "Dendroplex (=Xiphorhynchus) necopinus Zimmer 1934 (Dendrocolaptidae) Is a Junior Synonym of Dendrornis kienerii (=Xiphorhynchus picus kienerii) Des Murs 1855". The Auk 119 2 (2002): 520-523. https://doi.org/10.2307%2F4089899.
    10.2307/4089899
  126. Aleixo, A.; Whitney, B.M.. "Dendroplex (=Xiphorhynchus) necopinus Zimmer 1934 (Dendrocolaptidae) is a junior synonym of Dendrornis kienerii (=Xiphorhynchus picus kienerii) Des Murs 1855". Auk 119 2 (2002): 520-523. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036096922&partnerID=MN8TOARS.
    10.1642/0004-8038(2002)119[0520:DXNZDI]2.0.CO;2
  127. Aleixo, A.. "Molecular systematics and the role of the "várzea"-"terra-firme" ecotone in the diversification of Xiphorhynchus woodcreepers (Aves: Derocolaptidae)". Auk 119 3 (2002): 621-640. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036656033&partnerID=MN8TOARS.
    10.1642/0004-8038(2002)119[0621:MSATRO]2.0.CO;2
  128. Aleixo, A.; Whitney, B.M.; Oren, D.C.. "Range extensions of birds in Southeastern Amazonia". Wilson Bulletin 112 1 (2000): 137-142. http://www.scopus.com/inward/record.url?eid=2-s2.0-0034092496&partnerID=MN8TOARS.
    10.1676/0043-5643(2000)112[0137:REOBIS]2.0.CO;2
  129. Alexandre Aleixo. "Effects of Selective Logging on a Bird Community in the Brazilian Atlantic Forest". The Condor 101 3 (1999): 537-548. https://doi.org/10.2307%2F1370183.
    10.2307/1370183
  130. Alexandre Aleixo. "Lek Behavior of the Gray-Hooded Flycatcher". The Condor 100 4 (1998): 726-731. https://doi.org/10.2307%2F1369755.
    10.2307/1369755
  131. Mauro Galetti; Alexandre Aleixo. "Effects of palm heart harvesting on avian frugivores in the Atlantic rain forest of Brazil". Journal of Applied Ecology 35 2 (1998): 286-293. https://doi.org/10.1046%2Fj.1365-2664.1998.00294.x.
    10.1046/j.1365-2664.1998.00294.x
  132. Mauro Galetti; Paulo Martuscelli; Fábio Olmos; Alexandre Aleixo. "Ecology and conservation of the jacutinga Pipile jacutinga in the Atlantic forest of Brazil". Biological Conservation 82 1 (1997): 31-39. https://doi.org/10.1016%2Fs0006-3207%2897%2900004-9.
    10.1016/s0006-3207(97)00004-9
  133. Alexandre Aleixo; Mauro Galetti. "The conservation of the avifauna in a lowland Atlantic forest in south-east Brazil". Bird Conservation International 7 03 (1997): 235-261. https://doi.org/10.1017%2Fs0959270900001556.
    10.1017/s0959270900001556
  134. Galetti, M.; Martuscelli, P.; Olmos, F.; Aleixo, A.. "Ecology and conservation of the jacutinga Pipile jacutinga in the Atlantic Forest of Brazil". Biological Conservation 82 1 (1997): 31-39. http://www.scopus.com/inward/record.url?eid=2-s2.0-0030814455&partnerID=MN8TOARS.
    10.1016/S0006-3207(97)00004-9
  135. Aleixo, A.; Galetti, M.. "The conservation of the avifauna in a lowland Atlantic forest in south-east Brazil". Bird Conservation International 7 3 (1997): 235-261. http://www.scopus.com/inward/record.url?eid=2-s2.0-0031392298&partnerID=MN8TOARS.
  136. Alexandre Aleixo; Jacques M.E. Vielliard. "Composição e dinâmica da avifauna da mata de Santa Genebra, Campinas, São Paulo, Brasil". Revista Brasileira de Zoologia 12 3 (1995): 493-511. https://doi.org/10.1590%2Fs0101-81751995000300004.
    10.1590/s0101-81751995000300004

Other

Dataset
  1. Alexandre, Aleixo. Appendix C. Supplementary results with tables showing functional trait Principal Components and additional model results..
    10.6084/m9.figshare.3563151
  2. Alexandre, Aleixo. Appendix C. Supplementary results with tables showing functional trait Principal Components and additional model results..
    10.6084/m9.figshare.3563151.v1
  3. Alexandre, Aleixo. Natural history specimens collected and/or identified and deposited..
    10.5281/zenodo.3698001
  4. Alexandre, Aleixo. Appendix B. Expanded materials and methods detailing trait and model selection Avian functional traits..
    10.6084/m9.figshare.3563154
  5. Alexandre, Aleixo. Natural history specimens collected and/or identified and deposited..
    10.5281/zenodo.3698002
  6. Alexandre, Aleixo. Appendix B. Expanded materials and methods detailing trait and model selection Avian functional traits..
    10.6084/m9.figshare.3563154.v1
  7. Alexandre, Aleixo. Appendix A. Table showing diet and trait variation across bird species identified in communities..
    10.6084/m9.figshare.3563157
  8. Alexandre, Aleixo. Pseudasthenes, a new genus of ovenbird (Aves: Passeriformes: Furnariidae).
    10.15468/ayhkm1
  9. Alexandre, Aleixo. A distinctive new species of gnatcatcher in the Polioptila guianensis complex (Aves, Polioptilidae) from western Amazonian Brazil.
    10.15468/enqcvw
  10. Alexandre, Aleixo. A distinctive new species of gnatcatcher in the Polioptila guianensis complex (Aves, Polioptilidae) from western Amazonian Brazil.
    10.15468/kz5zpo
  11. Alexandre, Aleixo. Data from: Hybridization in headwater regions, and the role of rivers as drivers of speciation in Amazonian birds.
    10.5061/dryad.23s51
  12. Alexandre, Aleixo. Certhiasomus, a new genus of woodcreeper (Aves: Passeriformes: Dendrocolaptidae).
    10.15468/fxftf2
Other output
  1. Mixing the waters: a linear hybrid zone between two riverine Neotropical cardinals (Paroaria baeri and P. gularis). 2017. Juan I. Areta; Túlio Dornas; Guy M. Kirwan; Lucas Eduardo Araújo-Silva; Alexandre Aleixo.
    10.6084/m9.figshare.4753027
  2. Habitat preference predicts genetic diversity and population divergence in Amazonian birds. 2016. Michael Harvey; Alexandre Aleixo; Camila C Ribas; Robb T Brumfield. https://doi.org/10.1101%2F085126.
    10.1101/085126
  3. Peer Review #2 of "An examination of species limits in the Aulacorhynchus “prasinus” toucanet complex (Aves: Ramphastidae) (v0.1)". 2016. Alexandre Aleixo.
    10.7287/peerj.2381v0.1/reviews/2
  4. Supplementary material from "Using avian functional traits to assess the impact of land-cover change on ecosystem processes linked to resilience in tropical forests". 2016. Tom P. Bregman; Alexander C. Lees; Hannah E. A. MacGregor; Bianca Darski; Nárgila G. De Moura; Alexandre Aleixo; Jos Barlow; Joseph A. Tobias.
    10.6084/m9.figshare.c.3587192
  5. Appendix S1 from Using avian functional traits to assess the impact of land-cover change on ecosystem processes linked to resilience in tropical forests. 2016. Tom P. Bregman; Alexander C. Lees; Hannah E. A. MacGregor; Bianca Darski; Nárgila G. De Moura; Alexandre Aleixo; Jos Barlow; Joseph A. Tobias.
    10.6084/m9.figshare.4276598.v1
  6. Supplementary material from "Using avian functional traits to assess the impact of land-cover change on ecosystem processes linked to resilience in tropical forests". 2016. Tom P. Bregman; Alexander C. Lees; Hannah E. A. MacGregor; Bianca Darski; Nárgila G. De Moura; Alexandre Aleixo; Jos Barlow; Joseph A. Tobias.
    10.6084/m9.figshare.c.3587192.v1
  7. Species interactions regulate the collapse of biodiversity and ecosystem function in tropical forest fragments. 2016. Tom P. Bregman; Alexander C. Lees; Nathalie Seddon; Hannah E. A. MacGregor; Bianca Darski; Alexandre Aleixo; Michael B. Bonsall; Joseph A. Tobias.
    10.6084/m9.figshare.c.3308025.v1
  8. Fig 1 in A distinctive new species of gnatcatcher in the Polioptila guianensis complex (Aves, Polioptilidae) from western Amazonian Brazil. 2013. Andrew Whittacker; Alexandre Aleixo; Brian T. Smith; J. Klicka.
    10.5281/zenodo.15083
  9. Fig 2 in A distinctive new species of gnatcatcher in the Polioptila guianensis complex (Aves, Polioptilidae) from western Amazonian Brazil. 2013. Andrew Whittacker; Alexandre Aleixo; Brian T. Smith; J. Klicka.
    10.5281/zenodo.15084
  10. Fig 3 in A distinctive new species of gnatcatcher in the Polioptila guianensis complex (Aves, Polioptilidae) from western Amazonian Brazil. 2013. Andrew Whittacker; Alexandre Aleixo; Brian T. Smith; J. Klicka.
    10.5281/zenodo.15085
  11. A distinctive new species of gnatcatcher in the Polioptila guianensis complex (Aves, Polioptilidae) from western Amazonian Brazil. 2013. Andrew Whittacker; Alexandre Aleixo; Brian T. Smith; J. Klicka.
    10.5281/zenodo.15074
  12. Figure 1. A In Pseudasthenes, A New Genus Of Ovenbird (Aves: Passeriformes: Furnariidae). 2010. Alexandre Aleixo; Terry Chesser; Jr, Remsen; Robb T. Brumfield.
    10.5281/zenodo.294043
  13. Figure 1. A In Certhiasomus, A New Genus Of Woodcreeper (Aves: Passeriformes: Dendrocolaptidae). 2010. Elizabeth Derryberry; Santiago Claramunt; Terry Chesser; Alexandre Aleixo; Joel Cracraft; Robert G. Moyle; Robb T. Brumfield.
    10.5281/zenodo.293913
  14. Figure 2 In Certhiasomus, A New Genus Of Woodcreeper (Aves: Passeriformes: Dendrocolaptidae). 2010. Elizabeth Derryberry; Santiago Claramunt; Terry Chesser; Alexandre Aleixo; Joel Cracraft; Robert G. Moyle; Robb T. Brumfield.
    10.5281/zenodo.293914