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Seasoned professor, educator, data scientist and software engineer managing projects at the frontier between artificial intelligence and databases. Twenty years of hands-on experience with data and knowledge management software development, including in-depth knowledge of the following: data standards; data policies and information assurance, such as security and privacy; data operation including curation, quality monitoring, semantic integration, provenance management, and uncertainty assessment; data visualization; data analytics including automated reasoning; and planning, developing, acquiring, and operating large-scale data solutions. Developed a track record of addressing organizations’ critical data infrastructure needs in twenty-four sponsored projects, including ten projects as Principal Investigator and five projects as Manager. Most of these sponsored projects are from very competitive funding agents like the National Institutes of Health (NIH), the Defense Advanced Research Projects Agency (DARPA), the National Aeronautics and Space Administration (NASA), and the National Science Foundation (NSF). Authored 100+ peer-reviewed scientific publications. Published and served as program committee member of both the Association for the Advancement of Artificial Intelligence (AAAI) conference and the International Joint Conferences on Artificial Intelligence (IJCAI), the top two international conferences in the field of Artificial Intelligence Headed software and data operations for a major utility company: led a task force of 120+ software developers, financial experts, and accountants who successfully maintained and enhanced a combination of twelve corporative systems and sixty departmental systems responsible for managing more than 20 million customer accounts in multiple relational databases, including the use of data warehouses and spatial data repositories Co-founded the National Science Foundation (NSF)-funded CyberShare Center of Excellence at the University of Texas at El Paso. Out of thousands of NSF-funded projects, the center was one of the four projects highlighted in the agency’s 2010 annual budget request to Congress due to the center’s computer science contributions, including those in data analytics and data visualization
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Identification

Personal identification

Full name
Paulo Pinheiro

Citation names

  • Pinheiro, Paulo
  • Pinheiro da Silva, Paulo
  • da Silva, Paulo

Author identifiers

Ciência ID
BE11-62F5-F7F1
ORCID iD
0000-0001-8469-4043
Google Scholar ID
WmL9m2MAAAAJ

Email addresses

  • paulo.pinheiro@ipiaget.pt (Professional)

Addresses

  • Avenida Jorge Peixinho, n.º30, Av. Jorge Peixinho 30, 2805-059, Almada, Setúbal, Portugal (Professional)

Websites

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
English Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2) Proficiency (C2)
Education
Degree Classification
2002 - 2005
Concluded
 Inteligência Artificial (Pós-doutoramento)
Major in Inteligência Artificial
Stanford University, United States
1998 - 2002
Concluded
 Ciência da Computação (Doctor)
Major in Engenharia de Software
The University of Manchester, United Kingdom
"Object Modeling of Interactive Systems: The UMLi Approach" (THESIS/DISSERTATION)
1997 - 1998
Concluded
 Ciência da Computação (Mestrado)
Major in Bases de Dados
Universidade Federal de Minas Gerais, Brazil
"Um Estudo sobre a Migração de Sistemas Legados Centralizados para Ambientes Distribuídos " (THESIS/DISSERTATION)
1993 - 1996
Concluded
 Matemática (Licenciatura)
Universidade Federal de Minas Gerais, Brazil
Affiliation

Science

Category
Host institution 		Employer
2014 - 2022 Coordinating Researcher (Research) Rensselaer Polytechnic Institute, United States
2011 - 2013 Coordinating Researcher (Research) Pacific Northwest National Laboratory, United States
2002 - 2005 Postdoc (Research) Stanford University, United States
1998 - 2002 Research Assistant (Research) The University of Manchester, United Kingdom

Teaching in Higher Education

Category
Host institution 		Employer
2023/09 - Current Teacher Coordinator (Polytechnic Teacher) Instituto Piaget, Portugal
2011 - 2013 Associate Professor (University Teacher) The University of Texas at El Paso, United States
2006 - 2011 Assistant Professor (University Teacher) The University of Texas at El Paso, United States

Other Careers

Category
Host institution 		Employer
1992 - 1998 Técnico Superior (Técnico Superior) COPASA-MG - Companhia de Saneamento do Estado de Minas Gerais, Brazil

Positions / Appointments

Category
Host institution 		Employer
2022 - Current President Parcela Semântica Lda, Portugal
2015 - Current President of the Scientific Council Organização HADatAc (HADatAc.org), United States
Projects

Contract

Designation Funders
2015/09 - 2025/05 Human Health Exposure Analysis Resource (HHEAR) Data Center
U2CES026555
Researcher
Rensselaer Polytechnic Institute, United States

Icahn School of Medicine at Mount Sinai, United States
National Institute of Environmental Health Sciences
Ongoing
2023 - 2025 The Arrowhead flexible Production Value Network (fPVN)
101111977
Co-Principal Investigator (Co-PI)
Instituto Piaget, Portugal

Universidade NOVA de Lisboa, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2015 - 2020 NIH Children's Health Exposure Analysis Resource
CHEAR
Researcher
Rensselaer Polytechnic Institute, United States

Icahn School of Medicine at Mount Sinai, United States
National Institute of Environmental Health Sciences
Concluded
2016 - 2018 Healthy Birth, Growth, and Development knowledge integration
HBGD
Researcher
Rensselaer Polytechnic Institute, United States

Yale University School of Architecture, United States
Bill and Melinda Gates Foundation
Concluded
2011 - 2014 CI-Team Diff: The Virtual Learning Commons
CI-TEAM
Researcher
The University of Texas at El Paso, United States

Pacific Northwest National Laboratory, United States
National Science Foundation
Concluded
2010 - 2014 PNNL Chemical Image Initiative
CII
Researcher
Pacific Northwest National Laboratory, United States
 US Department of Energy
Concluded
2011 - 2013 NASA: The Earth, Life and Semantic Web (ELSeWeb)
ELSeWeb
Researcher
The University of Texas at El Paso, United States

The University of New Mexico, United States

University of California Santa Barbara, United States

Pacific Northwest National Laboratory, United States
NASA
Concluded
2012 - 2012 PNNL SEED Laboratory Director Research & Development
SEED-LDRD
Principal investigator
Pacific Northwest National Laboratory, United States
 US Department of Energy Office of Science
Concluded
2007 - 2012 Cyber-ShARE Center of Excellence: Sharing Resources to Advance Research and Education Through Cyberinfrastructure
0734825
Co-Principal Investigator (Co-PI)
The University of Texas at El Paso, United States
 National Science Foundation
Concluded
2008 - 2010 Track 2: Visually Explaining Cargo Shipment Threat Detection
SMA-MSI
Principal investigator
The University of Texas at El Paso, United States
 US Department of Homeland Security
Concluded
2006 - 2007 DARPA Personalized Assistant that Learns
DARPA-PAL
Researcher
Stanford University Knowledge Systems Laboratory, United States

The University of Texas at El Paso, United States

SRI International Artificial Intelligence Center, United States
Defense Advanced Research Projects Agency
Concluded
2005 - 2005 DARPA Explainable Knowledge Aggregation
DARPA-EXPL-K
Researcher
Stanford University Knowledge Systems Laboratory, United States
 Defense Advanced Research Projects Agency
Concluded
2004 - 2005 ARDA Novel Intelligence from Massive Data
ARDA-NIMD
Researcher
Stanford University Knowledge Systems Laboratory, United States

International Business Machines Corp, United States
Intelligence Advanced Research Projects Activity
Concluded
2002 - 2005 DARPA Agent Markup Language (DAML)
DARPA-DAML
Researcher
Stanford University Knowledge Systems Laboratory, United States

Stanford Research Institute, United States
Defense Advanced Research Projects Agency
Concluded
2002 - 2003 DARPA Rapid Knowledge Formation
DARPA-RKF
Researcher
Stanford University Knowledge Systems Laboratory, United States
 Defense Advanced Research Projects Agency
Concluded
2002 - 2003 ARDA Aquaint
KSLAquaint
Researcher
Stanford University Knowledge Systems Laboratory, United States

SAIC, United States

International Business Machines Corp, United States
Intelligence Advanced Research Projects Activity
Concluded
Outputs

Publications

Book chapter
  1. Eric G Stephan; Pinheiro, Paulo; Kerstin Kleese van Dam. "Bridging the Gap between Scientific Data Producers and Consumers: A Provenance Approach". In Data Intensive Science, 279-300. Chapman & Hall/CRC, 2013.
  2. Ann Q. Gates; Pinheiro, Paulo; Leonardo Salayandia; Omar Ochoa; Aida Gandara; Nicholas Del Rio. "Use of Abstraction to Support Geoscientists’ Understanding and Production of Scientific Artifacts". In Geoinformatics: Cyberinfrastructure for the Solid Earth Sciences, 266-283. Cambridge University Press, 2011.
  3. Deborah L McGuinness; Vasco Furtado; Pinheiro, Paulo; Li Ding; Alyssa Glass; Cynthia Chang. "Explaining Semantic Web Applications". In Semantic Web Engineering in the Knowledge Society, 1-24. 2008.
  4. Deborah L McGuinness; Pinheiro, Paulo. "Trusting Answers on the Web". In New Directions in Question Answering. AAAI/MIT Press, 2004.
Conference abstract
  1. Deborah L. McGuinness; Pinheiro, Paulo; Henrique Santo; Matthew Klawon; Katie Chastai. "IN33F-02: Semantic Support for Complex Ecosystem Research Environments". Paper presented in AGU Fall Meeting, San Francisco, CA, 2015.
  2. Pinheiro, Paulo; Deborah L. McGuinness. "Provenance-Enabled Integration of Sensor Network Data". San Francisco, CA, 2014.
  3. Deborah L. McGuinness; Pinheiro, Paulo; Evan W. Patton ; Katie Chastain. "N21B-3712 Semantic eScience for Ecosystem Understanding and Monitoring: The Jefferson Project Case Study". San Francisco, CA, 2014.
  4. Evan W. Patton; Pinheiro, Paulo; Deborah L. McGuinness. "IN22A-05: Semantically aided interpretation and querying of Jefferson Project data using the SemantEco framework". San Francisco, CA, 2014.
  5. Pinheiro, Paulo; Nicholas Del Rio. "Semantic Composition and Reuse of Services in Support of Collab- orative DataLabs". Paper presented in AGU Fall Meeting 2012, San Francisco, CA, 2012.
  6. Nicholas Del Rio; Pinheiro, Paulo; Deana Pennington; Karl Benedict. "Streamlining Data Access Services and Data Analysis Services Integration". Paper presented in AGU Fall Meeting 2012, San Francisco, CA, 2012.
  7. Nicholas Del Rio; Pinheiro, Paulo. "Declarative Visualization Queries". Paper presented in AGU Fall Meeting 2011, San Francisco, CA, 2011.
  8. Nicholas Del Rio; Gregory Leptoukh; Christopher Lynnes; Pinheiro, Paulo. "Towards Infusing Giovanni with a Semantic and Provenance Aware Visualization System". Paper presented in AGU Fall Meeting 2011, San Francisco, CA, 2011.
  9. Deborah L. McGuinness; Peter Fox; Pinheiro, Paulo; Stephan Zednik; Nicholas Del Rio; Li Ding; Patrick West; Cynthia Chang. "Annotating and embedding provenance in science data repositories to enable next generation science applications". Paper presented in AGU Fall Meeting 2008, San Francisco, CA, 2008.
  10. Nicholas Del Rio; Pinheiro, Paulo. "Towards Debugging Maps Generated By GEON Applications Through Provenance". San Diego, CA, 2007.
Conference paper
  1. Pinheiro, Paulo; Henrique Santos; Miao Qi; Kristin P. Benett; Deborah L McGuinness. "Towards Machine-Assisted Biomedical Data Preparation: A Use Case on Disparity in Access to Health Care". Paper presented in 6th Workshop on Semantic Web solutions for large-scale biomedical data analytics (SeWeBMeDa 2023), Hersonissos, 2023.
  2. Henrique Santos; Pinheiro, Paulo; Jamie McCusker; Sabbir M Rashid; Deborah L McGuinness. "SciKG: Tutorial on Building Scientific Knowledge Graphs from Data, Data Dictionaries, and Codebooks Authors". Paper presented in 2023 Extended Semantic Web Conference, Hersonissos, 2023.
  3. Henrique Santos; Kelsey Rook; Pinheiro, Paulo; Bruce Chorpita; Deborah L McGuinness. "Facilitating Reuse of Mental Health Questionnaires via Knowledge Graphs". Paper presented in The Healthcare and Life Sciences Symposium (HCLS), Nova Iorque, 2023.
  4. Mattew Johnson; Meenu Ravi; Pinheiro, Paulo; Jeanette Stingone; Deborah L McGuinness. "A Semi-Automated Approach to Data Harmonization Across Environmental Health Studie". Paper presented in 2nd Annual Conference of the International Society for Environmental Epidemiology (ISEE), 2020.
  5. Jeanette Stione; Pinheiro, Paulo; John Meola; Jamie McCusker; Sophia Bengoa; Patricia Kovatch; Deborah L McGuinness; Susan Teitelbaum. "The CHEAR Data Repository: Facilitating children’s environmental health and exposome research through data harmonization, pooling and accessibility". Paper presented in Annual Meeting for the International Society of Environmental Epidemiology, Utrecht, 2019.
  6. Pinheiro, Paulo; Henrique Santos; Zhicheng Liang; Yue Liu; Sabbir Rashid; Deborah L McGuinness; Marcello P. Bax. "HADatAc: A Framework for Scientific Data Integration using Ontologies". Paper presented in International Semantic Web Conference, Monterrey, 2018.
  7. Pinheiro, Paulo; Marcello P. Bax; Henrique Santos; Sabbir M Rashid; Zhicheng Liang; Yue Liu; Jamie McCusker; Deborah L McGuinness. "Annotating Diverse Scientific Data with HAScO". Paper presented in The Seminar on Ontology Research in Brazil 2018 (ONTOBRAS 2018), São Paulo, 2018.
  8. Henrique Santos; Victor Dantas; Vasco Furtado; Pinheiro, Paulo; Deborah L McGuinness. "From Data to City Indicators: A Knowledge Graph for Supporting Automatic Generation of Dashboard". Paper presented in European Semantic Web Conference (ESWC), Portoroz, 2017.
    10.1007/978-3-319-58451-5_7
  9. Jamie McCuker; Sabbir M Rashid; Zhicheng Liang; Yue Liu; Katherine Chastain; Pinheiro, Paulo; Jeanette A. Stingone; Deborah L. McGuinness. "Broad, Interdisciplinary Science In Tela: An Exposure and Child Health Ontology". Troy, NY, 2017.
    10.1145/3091478.3091497
  10. Naomi Keena; Mohamed Aly Etman; Josh Drape; Pinheiro, Paulo; Anna Dyson. "Interactive Visualization for Interdisciplinary Research". Paper presented in Visualization and Data Analysis (VDA), San Francisco, CA, 2016.
  11. Pinheiro, Paulo; Deborah L. McGuinness; Henrique Santos. "Human-Aware Sensor Network Ontology: Semantic Support for Empirical Data Collection". Paper presented in 5th Workshop on Linked Science 2015 — Best Practices and the Road Ahead (LISC2015), Bethlehem, PA, 2015.
    10.48550/arXiv.1704.01806
  12. Laura Kinkead; Pinheiro, Paulo; Deborah L. McGuinness. "Automating the Collection of Semantic Sensor Network Metadata in the Field with Mobile Applications". Bethlehem, PA, 2015.
  13. Henrique Santos; Vasco Furtado; Pinheiro, Paulo; Deborah L. McGuinness. "Contextual Data Collection for Smart Cities". Paper presented in 6th Workshop on Semantics for Smarter Cities (S4SC 2015), Bethlehem, PA, 2015.
  14. Leonado Salayandia ; Ann Q. Gates; Pinheiro, Paulo. "An Approach to Evaluate Scientist Support in Abstract Workflows and Provenance Trace". Arlington, VA, 2012.
  15. Nicholas Del Rio; Pinheiro, Paulo. "Capturing and Using Knowledge about the Use of Visualization Toolkits". Arlington, VA, 2012.
  16. Pinheiro, Paulo; Zoe Guillen; Kerstin Kleese van Dam. "Capturing Knowledge Graphs of Large-Scale Scientific Social Networks". Chicago, IL, 2012.
  17. Kerstin Kleese van Dam; JP Carson; AL Corrigan; DR Einstein; ZC Guillen; BS Heath; AP Kuprat; et al. "Velo and REXAN - Integrated Data Management and High Speed Analysis for Experimental Facilities". Chicago, IL, 2012.
    10.1109/eScience.2012.6404463
  18. Jamie McCusker; Timothy Lebo; Alvaro Graves; Dominic Difranzo; Pinheiro, Paulo; Deborah L. McGuinness. "Functional Requirements for Information Resource Provenance on the Web". Santa Barbara, CA, 2012.
    10.1007/978-3-642-34222-6_5
  19. Jamie McCusker; Timothy Lebo; Li Ding; Cynthia Chang; Pinheiro, Paulo; Deborah L. McGuinness. "Where did you hear that? Information and the Sources They Come From". Bonn, 2011.
  20. Geoff Sutcliffe; Cynthia Chang; Deborah L. McGuinness; Timothy Lebo; Li Ding; Pinheiro, Paulo. "Combining Proofs to form Different Proof". Paper presented in First Workshop on Proof eXchange for Theorem Proving (PxTP-2011), Wroclaw, 2011.
  21. Aida Gandara; George Chin; Pinheiro, Paulo; Chandrika Sivaramakrishnan; Signe White. "Knowledge Annotations in Scientific Workflows: An Implementation in Kepler". Portland, OR, 2011.
    10.1007/978-3-642-22351-8_11
  22. Geoff Sutcliffe; Cynthia Chang; Li Ding; Deborah L. McGuinness; Pinheiro, Paulo. "Different Proofs are Good Proofs". Edinburgh, 2010.
    10.29007/kwk9
  23. Aida Gandara; Pinheiro, Paulo. "Provenance Support for Content Management Systems: A Drupal Example". Troy, NY, 2010.
    10.1007/978-3-642-17819-1_33
  24. Eric Stephan; Todd Halter; Terence Critchlow; Pinheiro, Paulo; Leonardo Salayandia. "Using Domain Requirements to Achieve Science-Oriented Provenance". Paper presented in 3rd International Provenance and Annotation Workshop (IPAW 2010), Troy, NY, 2010.
    10.1007/978-3-642-17819-1_40
  25. Nicholas Del Rio; Pinheiro, Paulo; Hugo Porras. "Browsing Proof Markup Language Provenance: Enhancing the Experience". Troy, NY, 2010.
    10.1007/978-3-642-17819-1_31
  26. Leonardo Salayandia; Pinheiro, Paulo. "On the Use of Semantic Abstract Workflows rooted on Provenance Concepts". Paper presented in 3rd International Provenance and Annotation Workshop (IPAW’10), Troy, NY, 2010.
    10.1007/978-3-642-17819-1_24
  27. Pinheiro, Paulo; Leonardo Salayandia; Nicholas Del Rio; Ann Q. Gates. "On the Use of Abstract Workflows to Capture Scientific Process Provenance". San Jose, CA, 2010.
  28. Aida Gandara; Pinheiro, Paulo. "CI-Server: Towards a Collective Scientific Knowledge Environment". Savannah, GA, 2010.
  29. Stephan Zednik; Peter Fox; Deborah L. McGuinness; Pinheiro, Paulo; Cynthia Chang. "Semantic Provenance for Science Data Products: Application to Image Data Processing". Washington, DC, 2009.
  30. James Michaelis; Li Ding; Zhenning Shangguan; Stephan Zednik; Rui Huang; Pinheiro, Paulo; Nicholas Del Rio; Deborah L. McGuinness. "Towards Usable and Interoperable Workflow Provenance: Empirical Case Studies using PML". Paper presented in First International Workshop on the Role of Semantic Web in Provenance Management (SWPM 2009), Washington, DC, 2009.
    10.5555/2889875.2889880
  31. Nicholas Del Rio; Pinheiro, Paulo; Raed Aldouri. "Identifying and Explaining Map Quality Through Provenance: A User Study". Paper presented in IJCAI 2009 Workshop on Explanation-Aware Computing (ExACT 2009), Pasadena, CA, 2009.
    10.5555/3068461.3068474
  32. Pinheiro, Paulo; Deborah L. McGuinness; Li Ding; Nicholas Del Rio. "Inference Web in Action: Lightweight Use of Proof Markup Language". Paper presented in 7th International Semantic Web Conference (ISWC’08), Karlsruhe, 2008.
    https://doi.org/10.1007/978-3-540-88564-1_55
  33. Pinheiro, Paulo; Nicholas Del Rio; Vladik Kreinovich; Alejandro Castaneda. "TrustMap: Towards Trust Recommendations for Maps". Paper presented in Terra Cognita 2008, Karlsruhe, 2008.
  34. Pinheiro, Paulo; Nicholas Del Rio; Deborah L. McGuinness; Li Ding; Cynthia Chang; Geoff Sutcliffe. "User Interfaces for Portable Proofs". Paper presented in 8th International Workshop On User Interfaces for Theorem Provers (UITP’08), Montreal,QC, 2008.
  35. Peter Fox; Deborah L. McGuinness; Pinheiro, Paulo; Stephan Zednik; Jose Garcia; Nicholas Del Rio; Cynthia Chang. "Semantic Provenance for Image Data Processing". Potsdam, 2008.
  36. J. T. Yao; Y. Y. Yao; Vladik Kreinovich; Pinheiro, Paulo; Scott A. Stark; G. Xiang; H. T. Nguyen. "Towards More Adequate Representation of Uncertainty: From Intervals to Set Intervals, with the Possible Addition of Probabilities and Certainty Degree". Hong Kong, 2008.
  37. Pinheiro, Paulo; Aaron Velasco; Martine Ceberio; Christian Servin; Matthew G. Averill; Nicholas Del Rio; Luc Longpre; Vladik Kreinovich. "Propagation and Provenance of Probabilistic and Interval Uncertainty in Cyberinfrastructure-Related Data Processing and Data Fusion". Paper presented in Propagation and Provenance of Probabilistic and Interval Uncertainty in Cyberinfrastructure-Related Data Processing and Data Fusion, Savannah, GA, 2008.
  38. Pinheiro, Paulo; Vladik Kreinovich; Christian Servin. "Maximum Entropy in Support of Semantically Annotated Datasets". Karlsruhe, 2008.
  39. Pinheiro, Paulo; Geoff Sutcliffe; Cynthia Chang; Li Ding; Nicholas Del Rio; Deborah L. McGuinness. "Presenting TSTP Proofs with Inference Web Tools". Sydney, 2008.
  40. Nicholas Del Rio; Pinheiro, Paulo; Ann Q. Gates; Leonardo Salayandia. "Semantic Annotation of Maps Through Knowledge Provenance". Mexico City, 2007.
    10.1007/978-3-540-76876-0_2
  41. Ann Q. Gates; G. Randy Keller; Flor Salcedo; Pinheiro, Paulo; Leonardo Salayandia. "The Gravity Data Ontology: Laying the Foundation for Workflow-Driven Ontologies". Mecico City, 2007.
    10.1007/978-3-540-76876-0_19
  42. Nicholas Del Rio; Pinheiro, Paulo. "Probe-It! Visualization Support for Provenance". Paper presented in Third International Symposium on Visual Computing (ISVC 2007), Lake Tahoe, CA, 2007.
    10.1007/978-3-540-76856-2_72
  43. Deborah L. McGuinness; Alyssa Glass; Michael Wolverton; Pinheiro, Paulo. "A Categorization of Explanation Questions for Task Processing System". Paper presented in AAAI 2007 Workshop on Explanation-aware Computing, Vancouver, BC, 2007.
  44. Deborah L. McGuinness; Li Ding; Paulo Pinheiro; Cynthia Chang. "PML 2: A Modular Explanation Interlingua". Vancouver, BC, 2007.
  45. Deborah L. McGuinness; Alyssa Glass; Michael Wolverton; Pinheiro, Paulo. "Explaining Task Processing in Cognitive Assistants That Learn". Paper presented in Twentieth International FLAIRS Conference, Key West, FL, 2007.
  46. Vasco Furtado; Pinheiro, Paulo; Deborah L. McGuinness; Pryendra Deshwal; Dhyanesh Narayanan; Juliana Carvalho; Vladia Pinheiro; Cynthia Chang. "Abstracting Web Agent Proofs into Human-Level Justifications". Paper presented in Twentieth International FLAIRS Conference, Key West, FL, 2007.
  47. Leonardo Salayandia; Pinheiro, Paulo; Ann Q. Gates; Flor Salcedo. "Workflow-Driven Ontologies: An Earth Sciences Case Study". Amsterdam, 2006.
    10.1109/E-SCIENCE.2006.261101
  48. J. William Murdock; Deborah L. McGuinness; Pinheiro, Paulo; Chris Welty; David Ferrucci. "Explaining Conclusions from Diverse Knowledge Sources". Athens, GA, 2006.
    10.1007/11926078_62
  49. Leonardo Salayandia; Pinheiro, Paulo; Ann Q. Gates; Alvaro Rebellon. "A Model-Based Workflow Approach for Scientific Application". Portland, OR, 2006.
  50. Gilbert Ornelas; Pinheiro, Paulo. "Towards Believing Answers from Cyber-Infrastructure-based Applications". Ontario, 2006.
    10.1145/1501434.1501516
  51. Vladia Pinheiro; Vasco Furtado; Pinheiro, Paulo; Deborah L. McGuinness. "WebExplain: A UPML Extension to Support the Development of Explanations in the Web for Knowledge-Based System". Paper presented in Eighteenth International Conference on Software Engineering and Knowledge Engineering (SEKE’06), San Francisco, CA, 2006.
  52. Deborah L. McGuinness; Honglei Zeng; Pinheiro, Paulo; Li Ding; Dhyanesh Narayanan; Mayukh Bhaowal. "Investigations into Trust for Collaborative Information Repositories: A Wikipedia Case Study". Edinburgh, 2006.
  53. Patricia Victor; Chris Cornelis; Martine De Cock; Pinheiro, Paulo. "Towards a Provenance-Preserving Trust Model in Agent Networks". Edinburgh, 2006.
  54. Ann Gates; Vladik Kreinovich; Luc Longpre; Pinheiro, Paulo; G. Randy Keller. "Towards Secure Cyberinfrastructure for Sharing Border Information". Paper presented in Lineae Terrarum: International Border Conference, El Paso,TX e Las Cruces,NM, 2006.
  55. Honglei Zeng; Deborah L. McGuinness; Pinheiro, Paulo; Richard Fike. "Explaining Results from Information Retrieval and Integration". Paper presented in International Symposium on Explanation-aware Computing, AAAI Fall Symposium, Washington, DC, 2005.
  56. Vladia Pinheiro; Andreia Liborio; Ismael Rocha; Pinheiro, Paulo; Elizabeth Furtado; Vasco Furtado. "Auxiliando o Desenvolvimento de Explicaçoes para Sistemas Baseados em Conhecimento". Paper presented in Encontro Nacional de Inteligencia Artificial (ENIA2005), São Leopoldo, RS, 2005.
  57. J. William Murdock; Pinheiro, Paulo; David Ferrucci; Christopher Welty; Deborah L. McGuinness. "Encoding Extraction as Inferences". Stanford, CA, 2005.
  58. Martine De Cock; Pinheiro, Paulo. "A Many Valued Representation and Propagation of Trust and Distrust". Crema, 2005.
    10.1007/11676935_14
  59. Pavel Shvaiko; Fausto Giunchiglia; Pinheiro, Paulo; Deborah L. McGuinness. "Web Explanations for Semantic Heterogeneity Discovery". Heraklion, 2005.
    10.1007/11431053_21
  60. Ilya Zaihrayeu; Pinheiro, Paulo; Deborah L. McGuinness. "IWTrust: Improving User Trust in Answers from the Web". Rocquencourt, 2005.
    10.1007/11429760_27
  61. Christopher Welty; J. William Murdock; Deborah L. McGuinness; Pinheiro, Paulo; Richard Fikes; David Ferrucci. "Tracking Information Extraction from Intelligence Documents". McLean, VA, 2005.
  62. Deborah L. McGuinness; Pinheiro, Paulo. "Infrastructure for Web Explanations". Paper presented in 2nd International Semantic Web Conference (ISWC2003), Sanibel, FL, 2003.
    10.1007/978-3-540-39718-2_8
  63. Deborah L. McGuinness; Pinheiro, Paulo. "Registry-Based Support for Information Integration". Paper presented in f IJCAI-2003 Workshop on Information Integration on the Web (IIWeb-03), Acapulco, 2003.
  64. Deborah L. McGuinness; Pinheiro, Paulo. "Inference Web: Portable and Shareable Explanations for Question Answering". Paper presented in American Association for Artificial Intelligence Spring Symposium Workshop on New Directions for Question Answering, Stanford, CA, 2003.
  65. Pinheiro, Paulo; Norman W Paton. "Improving UML Support for User Interface Design: A Metric Assessment of UMLi". Portland, OR, 2003.
  66. Emmanuel Dubois; Pinheiro, Paulo; Philip D. Gray. "Notational Support for the Design of Augmented Reality System". Rostock, 2002.
    10.1007/3-540-36235-5_6
  67. Pinheiro, Paulo; Norman W. Paton. "A UML-Based Design Environment for Interactive Applications". Zurich, 2001.
    10.1109/UIDIS.2001.929926
  68. Pinheiro, Paulo; Alberto H. F. Laender; Paulo B. Golgher. "A Simulation Model for Performance Evaluation when Migrating a Legacy System". Lisboa, 2001.
    10.1109/CSMR.2001.914989
  69. Pinheiro, Paulo. "UMLi: Integrating User Interface and Application Design". York, 2000.
    10.1007/3-540-40011-7_9
  70. Pinheiro, Paulo. "User Interface Declarative Models and Development Environments: A Survey". Limerick, 2000.
    10.1007/3-540-44675-3_13
  71. Pinheiro, Paulo; Norman W. Paton. "User Interface Modelling with UML". Saariselka, 2000.
  72. Pinheiro, Paulo; Norman W. Paton. "UMLi: The Unified Modeling Language for Interactive Applications". Paper presented in 3rd International Conference on the Unified Modeling Language, York, 2000.
    10.5555/1765175.1765188
  73. Pinheiro, Paulo; Tony Griffiths; Norman W. Paton. "Generating User Interface Code in a Model Based User Interface Development Environment". Paper presented in International Working Conference on Advance Visual Interfaces2000 (AVI2000), Palermo, 2000.
    10.1145/345513.345301
  74. Pinheiro, Paulo; Alberto H. F. Laender; Rodolfo Resende; Paulo B. Golgher. "Characterizing a Synthetic Workload for Performance Evaluation during the Migration of a Legacy System". Zurich, 2000.
    10.1109/CSMR.2000.827325
  75. Pinheiro, Paulo; Alberto H. F. Laender; Rodolfo Resende; Paulo B. Golgher. "CAPPLES - A Capacity Planning and Performance Analysis Method for the Migration of Legacy Systems". Paris, 1999.
    10.1007/3-540-48054-4_17
Conference poster
  1. Peter Fox; Deborah L. McGuinness; Pinheiro, Paulo. "Knowledge Provenance in Virtual Observatories: Application to Image Data Pipelines". 2008.
  2. Pinheiro, Paulo; Leonardo Salayandia; Ann Q. Gates. "Using WDO-It to Build a Geoscience Ontology". 2007.
  3. Li Ding; Tim Finin; Y. Peng, ; Pinheiro, Paulo; Deborah L. McGuinness. "Tracking RDF Graph Provenance using RDF Molecules". 2005.
  4. Deborah L. McGuinness; Pavel Shvaiko; Fausto Giunchiglia; Pinheiro, Paulo. "Towards Explaining Semantic Matching". 2004.
  5. Pavel Shvaiko; Fausto Giunchiglia; Pinheiro, Paulo; Deborah L. McGuinness. "Web Explanations for Semantic Heterogeneity Discovery". Paper presented in International Semantic Web Conference 2004 (ISWC 2004), 2004.
    10.1007/11431053_21
Journal article
  1. Miao Qi; Henrique Santos; Pinheiro, Paulo; Deborah L McGuinness; Kristin P. Benett. "Demographic and socioeconomic determinants of access to care: A subgroup disparity analysis using new equity-focused measurements". PLoS ONE 18 11 (2023): https://doi.org/10.1371/journal.pone.0290692.
    10.1371/journal.pone.0290692
  2. Sabbir M Rashid; James P. McCusker; Pinheiro, Paulo; Marcello P. Bax; Henrique P. Santos; Jeanett M. Stingone; Amar K. Das. "The Semantic Data Dictionary – An Approach for Describing and Annotating Data". Data Intelligence 2 4 (2020): 443-486. https://doi.org/10.1162/dint_a_00058.
  3. Jeanett M. Stingone; Pinheiro, Paulo; John Meola; Jamie McCusker; Sophia Bengoa; Patricia Kovatch; Deborah L McGuinness; Susan Teitebaum. "The CHEAR Data Repository: Facilitating children's environmental health and exposome research through data harmonization, pooling and accessibility". Environmental Epidemiology 3 (2019): 38210.1097/01.EE9.00. https://journals.lww.com/environepidem/fulltext/2019/10001/the_chear_data_repository__facilitating_children_s.1167.aspx.
  4. Jamie McCusker; Timothy Lebo; Cynthia Chang; Deborah L McGuinness; Pinheiro, Paulo. "Parallel Identities for Managing Open Government Data". IEEE Intelligent Systems 27 3 (2012): 55-82. https://ieeexplore.ieee.org/document/6148195.
  5. Pinheiro, Paulo; Aaron Velasco; Olga Kosheleva; Vladik Kreinovich. "How AI-Type Uncertainty Ideas Can Improve Inter-Disciplinary Collaboration and Education: Lessons from a Case Study". Journal of Advanced Computational Intelligence and Intelligent Informatics 14 6 (2010): 700-707. https://www.semanticscholar.org/paper/How-AI-Type-Uncertainty-Ideas-Can-Improve-and-from-Pinheiro-Velasco/20b621095a22805db877a544014a53ea33adec5f.
  6. Paulo Pinhero; Leonardo Salayandia; Aida Gandara; Ann Q. Gates. "CI-Miner: Semantically Enhancing Scientific Processes". Earth Science Informatics 2 4 (2009): 249-269. https://link.springer.com/article/10.1007/s12145-009-0038-3.
  7. Patricia Victor; Chris Cornelis; Martine De Cock; Pinheiro, Paulo. "Gradual Trust and Distrust in Recommender Systems". Fuzzy Sets and Systems 160 10 (2009): 1367-1382. https://www.sciencedirect.com/science/article/abs/pii/S0165011408005290.
  8. Alyssa Glass; Deborah L McGuinness; Pinheiro, Paulo; Michael Wolverton. "Trustable Task Processing Systems". Kunstliche Intelligenz 1 8 (2008): 12-18.
  9. Pinheiro, Paulo; Deborah L McGuinness; Richard Fikes. "A Proof Markup Language for Semantic Web Services". Information Systems 31 4-5 (2006): 381-395. https://www.sciencedirect.com/science/article/abs/pii/S0306437905000281.
  10. Deborah L McGuinness; Pinheiro, Paulo. "Explaining Answers from the Semantic Web". Journal of Web Semantics 1 4 (2004): 397-413. https://www.sciencedirect.com/science/article/abs/pii/S1570826804000083.
  11. Pinheiro, Paulo; Deborah L McGuinness; Rob McCool. "Knowledge Provenance Infrastructure". IEEE Data Engineering Bulletin 26 4 (2003): 26-32. http://sites.computer.org/debull/A03dec/issue1.htm.
  12. Pinheiro, Paulo; Norman Paton. "User Interface Modeling in UMLi". IEEE Software 20 4 (2003): 62-69. https://www.computer.org/csdl/magazine/so/2003/04/s4062/13rRUyoyhMh.
  13. Tony Griffiths; Peter J. Barclay; Norman Paton; Jo McKirdy; Jessie Kennedy; Philip D. Gray; Richard Cooper; Carole A Goble; Pinheiro, Paulo. "Teallach: A Model-Based User Interface Development Environment for Object Databases". Interacting with Computers 14 1 (2001): 31-68. https://www.sciencedirect.com/science/article/abs/pii/S095354380100042X.
Report
  1. Henrique Santos; Vasco Furtado; Pinheiro, Paulo; Deborah L. McGuinness. 2017. Contextual Data Collection for Smart Cities.
  2. Pinheiro, Paulo; Steve Roach. 2010. A Use Case-Guided Comparison of OPM and PML. https://scholarworks.utep.edu/cs_techrep/669/.
  3. Alejandro Castaneda; Pinheiro, Paulo. 2008. Extracting Trust Network Information from Scientific Web Portals. https://scholarworks.utep.edu/cs_techrep/113/.
  4. Pinheiro, Paulo; Leonardo Salayandia; Ann Q. Gates. 2007. WDO-It! A Tool for Building Scientific Work- flows from Ontologies. https://scholarworks.utep.edu/cs_techrep/201/.
  5. Nicholas Del Rio; Pinheiro, Paulo. 2007. Identifying and Explaining Map Imperfections Through Knowl- edge Provenance Visualization. https://scholarworks.utep.edu/cs_techrep/183/.
  6. Deborah L. McGuinness; Pinheiro, Paulo; Michael Wolverton. 2005. Plan for Explaining Task Execution in CALO. http://ksl.stanford.edu/KSL_Abstracts/KSL-05-11.html.
  7. Vladia Pinheiro; Vasco Furtado; Pinheiro, Paulo; Deborah L. McGuinness. 2005. Explaining Problem Solver Answers. http://www-ksl.stanford.edu/KSL_Abstracts/KSL-05-02.html.
  8. Pinheiro, Paulo; Patrick Hayes; Deborah L. McGuinness; Richard Fike; Priyendra Deshwal. 2005. Towards Checking Hybrid Proofs. http://www-ksl.stanford.edu/KSL_Abstracts/KSL-05-01.html.
  9. Deborah L. McGuinness; Pinheiro, Paulo; Cynthia Chang. 2004. IWBase: Provenance Metadata Infrastructure for Explaining and Trusting Answers from the Web. http://www-ksl.stanford.edu/KSL_Abstracts/KSL-04-07.html.
  10. Pinheiro, Paulo; Patrick Hayes; Deborah L. McGuinness; Richard Fikes. 2004. PPDR: A Proof Protocol for Deductive Reasoning. http://www-ksl.stanford.edu/KSL_Abstracts/KSL-04-04.html.
  11. Pinheiro, Paulo; Deborah L. McGuinness; Richard Fikes. 2003. Combinable Proof Fragments for the Web. http://www-ksl.stanford.edu/KSL_Abstracts/KSL-03-04.html.
  12. Deborah L. McGuinness; Pinheiro, Paulo. 2003. Inference Web: Portable Explanations for the Web. http://www-ksl.stanford.edu/KSL_Abstracts/KSL-03-02.html.
  13. Pinheiro, Paulo. 2001. A Proposal for a LOTOS-Based Semantics for UML. http://apt.cs.manchester.ac.uk/ftp/pub/TR/UMCS-01-06-1.ps.

Other

Dataset
  1. Pinheiro, Paulo; Henrique Santo; Deborah L. McGuinness; Marcello P. Bax. Human-Aware Science Ontology. https://github.com/HADatAc/ontologies. 2017.
  2. Pinheiro, Paulo; Deborah L. McGuinness; Henrique Santos. HASNetO – Human-Aware Sensor Network Ontology. 2015.
Software
  1. Pinheiro, Paulo; Henrique Santos; Deborah L. McGuinness; Jason Zhang. "HADatAc – Human-Aware Data Acquisition Infrastructure". Organização HADatAc (HADatAc.org). Linux, MAC-OS. 2015.
  2. Nicholas Del Rio; Pinheiro, Paulo. "VisKo Visualization Knowledge Infrastructure". The University of Texas at El Paso. Linux. 2006.
  3. Pinheiro, Paulo; Deborah L. McGuinness. "Inference Web Infrastructure and Proof Markup Language API". Stanford University Knowledge Systems Laboratory. Linux. 2002.
  4. Pinheiro, Paulo; Tony Griffiths. "Model Based User Interface Generator of Teallach". The University of Manchester. Linux. 2000.
  5. Pinheiro, Paulo. "UMLi Editor: Unified Modeling Language for Interactive Applications". The University of Manchester School of Computer Science. Linux. 2000.
Standard or policy
  1. World Wide Web Consortium's PROV - Linguagem de Proveniência da Web. Provenance XG Final Report. World Wide Web Consortium (W3C) Incubator Group Report, 08 December 2010. 2010. Yolanda Gil; James Cheney; Paul Groth; Olaf Hartig; Simon Miles; Luc Moreau; Pinheiro, Paulo. https://www.w3.org/2005/Incubator/prov/XGR-prov-20101214/.
Activities

Supervision

Thesis Title
Role 		Degree Subject (Type)
Institution / Organization
2020 - 2023 Ingestão dos dados de Estratificação
Co-supervisor of Evaldo de Oliveira
 Ciência da Informação (PhD)
Universidade Federal de Minas Gerais Escola de Ciência da Informação, Brazil
2017 - 2020 Método de Integração Semantica de Dados
Co-supervisor of José Eugênio de Assis Gonçalves
 Ciência da Informação (PhD)
Universidade Federal de Minas Gerais Escola de Ciência da Informação, Brazil
2014 - 2018 An indicator-based approach for variable alignment based on knowledge graphs
Co-supervisor of Henrique Oliveira Santos
 Informática (PhD)
Universidade de Fortaleza, Brazil
2011 - 2013 Confiança em ciberinfraestrutura
Supervisor of Antonio Garza
 Computer Science (Master)
The University of Texas at El Paso, United States
2010 - 2013 A declarative domain independent approach for querying and generating visualizations
Supervisor of Nicholas Del Rio
 Computer Science (PhD)
The University of Texas at El Paso, United States
2010 - 2012 Confiança em ciberinfraestrutura
Supervisor of Hugo Porras
 Computer Science (Master)
The University of Texas at El Paso, United States
2009 - 2012 Ontologies for scientific data transformation
Supervisor of Leonardo Salayandia
 Computer Science (PhD)
The University of Texas at El Paso, United States
2010 - 2011 Confiança em ciberinfraestrutura
Supervisor of Patricia Reyes
 Computer Science (Master)
The University of Texas at El Paso, United States
2006 - 2008 Confiança em ciberinfraestrutura
Supervisor of Alejandro Castañeda
 Computer Science (Master)
The University of Texas at El Paso, United States
2006 - 2008 Engenharia de conhecimento
Co-supervisor of Juliana Cardoso
 Informática (Master)
Universidade de Fortaleza, Brazil
2006 - 2008 Engenharia do conhecimento
Co-supervisor of Carlos Gustavo Fernandes
 Informática (Master)
Universidade de Fortaleza, Brazil
2006 - 2007 Inference Web
Co-supervisor of Mayukh Bhaowal
 Computer Science (Master)
Stanford University, United States
2005 - 2006 Inference Web
Co-supervisor of Dhyanesh Narayanan
 Computer Science (Master)
Stanford University, United States
2004 - 2005 Inference Web
Co-supervisor of Priyendra Deshwal
 Computer Science (Master)
Stanford University, United States
2003 - 2005 Engenharia do conhecimento
Co-supervisor of Vládia C. M. Pinheiro
 Informática (Master)
Universidade de Fortaleza, Brazil

Jury of academic degree

Topic
Role 		Candidate name (Type of degree)
Institution / Organization
2018 Ecologia de construçoes
(Thesis) Arguer
 Mohamed Aly Etman (PhD)
Rensselaer Polytechnic Institute, United States
2017 Ecologia de construções
(Thesis) Arguer
 Naomi Keena (PhD)
Rensselaer Polytechnic Institute, United States

Committee member

Activity description
Role 		Institution / Organization
2017 - 2017 Membro da Força Tarefa do Plano de Contingência Tecnológica do Governo de Minas Gerais, Brasil Governo do Estado de Minas Gerais, Brazil

COPASA-MG - Companhia de Saneamento do Estado de Minas Gerais, Brazil

Evaluation committee

Activity description
Role 		Institution / Organization Funding entity
2008 - 2008 Revisor de propostas de projetos de Investigação, National Science Foundation, Estados Unidos. The University of Texas at El Paso, United States National Science Foundation
2003 - 2004 Revisor de propostas de projetos de Investigação, Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq), Brasil. Stanford University Knowledge Systems Laboratory, United States Conselho Nacional de Desenvolvimento Científico e Tecnológico
1997 - 1997 Revisor de propostas de projetos de investigação, Banco de Desenvolvimento de Minas Gerais (BDMG), Brasil COPASA-MG - Companhia de Saneamento do Estado de Minas Gerais, Brazil Banco de Desenvolvimento de Minas Gerais

Journal scientific committee

Journal title (ISSN) Publisher
2010 - 2016 International Journal Organizational Collective Intelligence (IJOCI) IGI Global
2010 - 2012 Semantic Web Journal IOS Press,