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Associate Professor with habilitation at University of Porto, Affiliate Professor at University of Montana, Affiliate Curator at the Cornell Museum of Vertebrate/University of Cornell, Director of EBM - Biological Station of Mértola, and President of "Centro de Ciencia Viva de Vila do Conde - Life Science of Vila do Conde". Head of Conservation Genetics and Wildlife Management research group, at CIBIO/InBIO - BIOPOLIS University of Porto. Director of the PhD program in Biodiversity, Genetics and Evolution (BIODIV), member of Scientific Board of the Master in Biodiversity, Genetic and Evolution (MBGE), Faculty of Sciences, University of Porto. Member of the General Council (Conselho Geral) of the University of Porto, Member of the Scientific Commission of the Faculty of Sciences. His main research field is conservation genetics, ecology and wildlife management, in particular lagomorphs (rabbits and hares), small mammals and carnivores. Recent research projects focus on developing and using genetic non-invasive sampling for studying rare or elusive animals (e.g. carnivores, small mammals) and environmental DNA for biodiversity monitoring, study of population dynamics and ecology of managed and threatened species, and ONE HEALTH. Author of over 240 scientific publications, including books, book chapters, papers in peer-reviewed journals (SCI), and outreach. Associate editor of the European Journal of Wildlife Research, Member of the Lagomorph Specialist Group from UICN and President of the WLS - World Lagomorph Society. http://cibio.up.pt/people/details/pcalves https://www.researchgate.net/profile/Paulo_Alves9
Identification

Personal identification

Full name
Paulo Célio ALVES

Citation names

  • ALVES, Paulo C

Author identifiers

Ciência ID
C512-E829-71E5
ORCID iD
0000-0003-4797-0939
Google Scholar ID
https://scholar.google.pt/citations?hl=pt-PT&user=g2xJWOwAAAAJ&view_op=list_works&gmla=AJsN-F58vO_2z4A_pZlc8GcGDdxBMq1Zk_nB7619SP55Y-xvaEFAHC20fjfW8MjmwWC_OwQ1f9hyIPXyPTihXIQiaN174hpNCAWVfQY6EgXQUmbVQkDu9c_rtDH1MdggulMpOnf0HOFOm9ONBSe10qXF5d7hwB6fng
Researcher Id
B-5448-2009
Scopus Author Id
35577733000

Websites

  • http://cibio.up.pt/main.php?content=members&id=pcalves&type=board and http://www.researcherid.com/rid/B-5448-2009 (Professional)

Knowledge fields

  • Natural sciences - Biological Sciences - Zoology

Languages

Language Speaking Reading Writing Listening Peer-review
English Advanced (C1) Advanced (C1) Advanced (C1) Advanced (C1)
French Intermediate (B1) Intermediate (B1) Beginner (A1) Intermediate (B1)
Spanish; Castilian Intermediate (B1) Intermediate (B1) Intermediate (B1) Intermediate (B1)
Education
Degree Classification
2014
Concluded
Habilitation in Biology (Graduado)
Universidade do Porto Faculdade de Ciências, Portugal
Approved by Unanimity
2002/07/08
Concluded
Biology (Doctor of Philosophy)
Universidade do Porto Faculdade de Ciências, Portugal
"Genetic and reproductive biology characterization of the Iberian hare (Lepus granatensis). Phylogeographic characterization, population differentiation abe annual breeding cycle " (THESIS/DISSERTATION)
Approved with Praise by Unanimity
2002
Concluded
Biologia (Doutoramento)
Major in Sem especialidade
Universidade do Porto Faculdade de Ciências, Portugal
"Caracterização Genética e Biologia Reprodutiva da Lebre Ibérica, Lepus Granatensis. Análise Filogenética, Diferenciação Populacional e Ciclo Anual de Reprodução" (THESIS/DISSERTATION)
1994
Concluded
Applied Ecology (Master)
Universidade do Porto Faculdade de Ciências, Portugal
"Estudo da reprodução e do estado de condição física de duas populações portuguesas de coelho-bravo, Oryctolagus cuniculus" (THESIS/DISSERTATION)
Very Good
1989
Concluded
Biology - Zoology (Bachelor)
Universidade do Porto Faculdade de Ciências, Portugal
15 (in 20)
Affiliation

Science

Category
Host institution
Employer
2006 - Current Principal Investigator (Research) Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Teaching in Higher Education

Category
Host institution
Employer
2012/04/12 - Current Associate Professor (University Teacher) Universidade do Porto, Faculdade de Ciências, Portugal
2002 - 2012 Assistant Professor (University Teacher) Universidade do Porto, Faculdade de Ciências, Portugal
1994/12/14 - 2002/07/08 Assistant (University Teacher) Universidade do Porto, Faculdade de Ciências, Portugal
1990/10/01 - 1994/12/14 Trainee Assistant (University Teacher) Universidade do Porto, Faculdade de Ciências, Portugal
1990/04/01 - 1990/10/01 Tutor (University Teacher) Universidade do Porto, Faculdade de Ciências, Portugal

Positions / Appointments

Category
Host institution
Employer
2018 - Current Member of Conselho Scientific Council of Faculty of Sciences Universidade do Porto, Portugal
2020 - 2023/12 Member of the Senate of University of Porto Universidade do Porto, Portugal
2014 - 2019 Member of the Direction board of Faculty of Sciences, University Porto Universidade do Porto, Faculdade de Ciências, Portugal

Others

Category
Host institution
Employer
2018/04 - Current Affiliate Curator CORNELL MUSEUM OF VERTEBRATES, United States
CORNELL MUSEUM OF VERTEBRATES, United States
2013/06/01 - Current Affiliate Professor University of Montana College of Forestry and Conservation, United States
Projects

Grant

Designation Funders
2023/03/01 - 2025/12/31 Application of genomic science to understand and monitor changes in biodiversity - Biodiversity Genomics Europe - BGE
Researcher
CIBIO/InBIO Associate Lab, University of Porto, Portugal

Associação BIOPOLIS - Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Horizon 2020
2017 - 2017 Museum National d’Histoire Naturelle, Paris
FR-TAF-5915
Principal investigator
EU, Synthesys grant
Concluded
2016 - 2016 Royal Belgian Institute of Natural Sciences (RBINS), and Royal Museum of Central Africa (RMCA), Brussels
BE-TAF-5010
BE-TAF-5010
Principal investigator
EU, Synthesys grant
Concluded
2015 - 2015 Museum für Naturkunde (MfN), Berlin. Synthesys grant, DE-TAF-4131.
DE-TAF-4131
Principal investigator
EU, Synthesys grant
Ongoing
2011 - 2014 The adaptive value of seasonal coat color change in response to global warming
FLAD-NSF
Principal investigator
Fundação Luso-Americana
Concluded
2006 - 2008 Development of new Molecular and Computational tools for Biodiversity Conservation and Wildlife Management
FLAD-NSF
Principal investigator
Fundação Luso-Americana
Concluded
2006 - 2008 Determination of the origin f the Northern African lagomorphs using a phylogenetic and phylogeographic approach
GRICES-CNRST
GRICES-CNRST
Principal investigator
Fundação para a Ciência e a Tecnologia
Concluded
2003 - 2003 Assessing the phylogeographic patterns of the Iberian hare, L. granatensis
Bilateral agreement Portugal-Austria
Principal investigator
Fundação para a Ciência e a Tecnologia, Portugal
Concluded
2001 - 2002 Comparative population genetics study of the European hares (L. europaeus, L. timidus, L. granatensis e L. corsicanus
Bilateral agreement Portugal-Austria
Principal investigator
Concluded

Contract

Designation Funders
2021/01/01 - 2025/12/31 Research Network in Biodiversity and Evolutionary Biology (InBIO)
LA/P/0048/2020
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2021/01/01 - 2025/12/31 Research Network in Biodiversity and Evolutionary Biology (InBIO)
LA/P/0048/2020
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2022/01/01 - 2024/12/31 MULTI-CRASH: Multi-dimensional ecological cascades triggered by an invasive species in pristine habitats
PTDC/CTA-AMB/0510/2021
Universidade do Minho Centro de Biologia Molecular e Ambiental, Portugal

Universidade do Minho, Portugal

Instituto Politécnico de Bragança, Portugal

Universidade de Trás-os-Montes e Alto Douro, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2023/03/01 - 2024/08/31 BAGA-PT: BAGAza in PorTugal - epidemiological assessment of emergent flavivirus at environment-wildlife-livestock-human interface
2022.09263.PTDC
Instituto de Investigación en Recursos Cinegéticos, Spain
Fundação para a Ciência e a Tecnologia
Ongoing
2021/03/15 - 2024/03/14 HybridChange – The potential of hybridization to promote rapid adaptation during climate change
PTDC/BIA-EVL/1307/2020
Researcher
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2020/01/01 - 2023/12/31 Research Network in Biodiversity and Evolutionary Biology
UIDB/50027/2020
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2020/01/01 - 2023/12/31 Research Network in Biodiversity and Evolutionary Biology
UIDP/50027/2020
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2022/01/17 - 2023/07/16 WildLivesTB - The Wildlife-Livestock interface of bovine TuBerculosis: quantifying the role of each species in disease transmission in multi-host communities
EXPL/CVT-CVT/1525/2021
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Instituto de Investigación en Recursos Cinegéticos, Spain

Universidade do Minho, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2022/01/01 - 2023/06/30 Big and small – How do we fit all? An integrative framework for investigating character displacement
EXPL/BIA-EVL/0470/2021
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Instituto de Productos Naturales y Agrobiología, Spain
Fundação para a Ciência e a Tecnologia
Ongoing
2019/11/01 - 2021/07/31 Confirmação Genética para o preenchimento de lacunas de Informação. Revisão do Livro Vermelho dos Mamíferos de Portugal Continental e contributo para a avaliação do seu estado de conservação.
POSEUR-03-2215-FC-000097
Principal investigator
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências
Ongoing
2018/07/01 - 2021/06/30 AGRIVOLE- The role of voles in agroecosystems: linking pest management to biodiversity conservation under environmental change
PTDC/BIA-ECO/31728/2017
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2018/05 - 2021/05/31 2CHANGE – To Change or not to Change? The genetic basis and evolution of seasonal coat colour polymorphism
PTDC/BIA-EVL/28124/2017; POCI-01-0145-FEDER-028124
PTDC/BIA-EVL/28124/2017
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Universidade do Algarve Faculdade de Ciências e Tecnologia

Fundação para a Ciência e a Tecnologia
Ongoing
2015/06/01 - 2020/07/31 EnvMetaGen - Capacity Building at InBIO for Research and Innovation Using Environmental Metagenomics.
H2020-WIDESPREAD-2014-2
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Ongoing
2018/11/01 - 2020/06/30 +Coelho 2: Desenvolvimento e implementação de medidas práticas impulsionadoras da recuperação dos leporídeos silvestres em Portugal / + Rabbit, Development and implementation of practical measures to promote the recovery of wild leporids in Portugal
Fundo Florestal Permanente
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundo Florestal Permanente, ICNF
Ongoing
2016 - 2020 Next-generation biomonitoring: freshwater bioassessment and species conservation improved with metagenomics.
PTDC/AAG-MAA/2261/2014
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia
Ongoing
2019/01/01 - 2019/12/31 Research Network in Biodiversity and Evolutionary Biology
UID/BIA/50027/2019
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Minho Laboratório de Paisagens Património e Território, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2019/01/01 - 2019/12/31 Rede de Investigação em Biodiversidade e Biologia Evolutiva
UID/BIA/50027/2019
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Fundação Gaspar Frutuoso, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade do Minho Laboratório de Paisagens Património e Território, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2016/07/11 - 2019/10/11 ‘MateFrag’ – Impacts of habitat fragmentation on social and mating systems: testing ecological predictions for a monogamous vole through non-invasive genetics
PTDC/BIA-BIC/6582/2014
Universidade de Évora, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2016 - 2019 CHANGE - Seasonal Coat Colour and the impact of Climate Change on the genetic composition of boreal species
PTDC/BIA-EVF/1624/2014
Researcher
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2015 - 2017 Iberlince - Recovering the historic distribution range of the Iberian lynx (Lynx pardinus) in Spain and Portugal”, contract on the scope of LIFE10 NAT/ES/000570/IBERLINCE
Services, ICNF
Principal investigator
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Instituto de Conservação da Natureza e das Florestas, ICNF
Concluded
2013/05 - 2016/05 HybridAdapt - Hybridization, adaptation and historical demography: a population genomics study
FCT-ANR/BIA-EVF/0250/2012
Principal investigator
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2014/10/01 - 2016/02/29 SOS COELHO: Bases para a recuperação de uma espécie chave nos ecossistemas Ibéricos; SOS Rabbit: Recouvering wild rabbit populations in Portugal
Fundo para a Conservação da Natureza e da Biodiversidade
Principal investigator
Fundo para a Conservação da Natureza e da Biodiversidade. ICNF, Portugal
Concluded
2013/07 - 2015/09 NETPERSIST. NETwork analysis of critical connectivity thresholds for metapopulation PERSISTence in complex agricultural landscapes
PTDC/AAG-MAA/3227/2012
Researcher
Rede de Investigação em Biodiversidade e Biologia Evolutiva, Portugal

Universidade de Évora, Portugal

Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal
Stichting Weten

Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2014/03 - 2015/02 ECOMITO - Unraveling the ecological impact of mitochondrial introgression
EXPL/AAG-MAA/1082/2013
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Universidade dos Açores Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2011/04/01 - 2014/09/30 Assessing the impact of adaptation and species range shifts during glacial cycles on mitochondrial DNA introgression
PTDC/BIA-EVF/111931/2009
Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal

Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2011/04 - 2014/09 CRYPSIS - Genetic determination and evolution of seasonal phenotype variation of coat-colour in boreal species
PTDC/BIA-EVF/115069/2009
Principal investigator
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2011/07 - 2014/06 SABOR FRAGMENTATION EXPERIMENT: UNDERTANDING LONG-TERM ECOLOGICAL CONSEQUENCES OF INFRASTRUCTURE DEVELOPMENT AND COMPENSATORY MITIGATION (SABOR-LTER)
LTER/BIA-BEC/0004/2009
BIA-BEC/0004/2009
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Universidade dos Açores Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2010/06/01 - 2013/11/30 Host-pathogen interaction: the Rabbit Haemorrhagic Disease (RHD) and the European Brown Hare Syndrome (EBHS)
PTDC/CVT/108490/2008
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Universidade dos Açores Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
Fundação para a Ciência e a Tecnologia

Fundação para a Ciência e a Tecnologia, I.P.
Concluded
2010/05 - 2013/06 PERSIST - The role of matrix permeability for metapopulation PERSISTence in complex agricultural landscapes. The cases of Cabrera (Microtus cabrerae) and southern water voles (Arvicola sapidus).
PTDC/BIA-BEC/105110/2008
Researcher
Universidade de Évora, Portugal

Universidade de Évora Instituto de Ciências Agrárias e Ambientais Mediterrânicas, Portugal

Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2010/06 - 2013/03 Urban Green Structure: Study of the relation between public space morphology and flora and fauna diversity in the city of Porto.
PTDC/AUR-URB/104044/2008
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2011/01/01 - 2012/12/31 Strategic Project - UI 609 - 2011-2012
PEst-C/BIA/UI0609/2011
Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Universidade do Porto Instituto de Ciências Tecnologias e Agroambiente, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
2008/06 - 2011/12 Evaluating the importance of the X-chromosome "large effect" in the initial stages of reproductive isolation between two pairs of divergent lagomorph taxa
PTDC/BIA-BDE/72277/2006
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2007/12/01 - 2011/11/30 Rabbit Haemorrhagic Disease (RHD): Molecular Biology of Resistance and Transmission of Calicivirus.
PTDC/CVT/66656/2006
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia

Fundação para a Ciência e a Tecnologia, I.P.
Concluded
2008/03 - 2011/05 Gene flow across the pillars of Hercules: the role of North Africa in the postglacial recolonization of Europe
PTDC/BIA-BDE/74349/2006
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Universidade dos Açores Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2007/10/01 - 2011/01/31 Identifying highly diagnostic molecular markers from domestication genes to efficiently detect hybrids between wof/dog and wild/domestic cat
PTDC/CVT/71683/2006
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia

Fundação para a Ciência e a Tecnologia, I.P.
Concluded
2005/09 - 2008/06 Interspecific mtDNA transfer, selection and adaptation to cold in hares
POCI/BIA-BDE/58817/2004
Principal investigator
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

CIBIO/InBIO Associate Lab, University of Porto, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2005/07/01 - 2007/12/31 Deciphering the mechanisms of rabbit genetic resistance to myxomatosis and rabbit haemorrhagic viral disease
POCI/BIA-BDE/61553/2004
Researcher
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Universidade dos Açores Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Universidade do Porto Instituto de Ciências Biomédicas Abel Salazar, Portugal
Fundação para a Ciência e a Tecnologia

Fundação para a Ciência e a Tecnologia, I.P.
Concluded
2005/10 - 2007/06 Identifying and preventing the hybridization of highly valuable game species (rabbit, red-legged partridge and quail) with domestic breeds and/or exotic species
POCI/CVT/61754/2004
Principal investigator
Universidade do Porto Instituto de Ciências e Tecnologias Agrárias e Agro-Alimentares, Portugal

Universidade dos Açores Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal

Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
Fundação para a Ciência e a Tecnologia, I.P.

Fundação para a Ciência e a Tecnologia
Concluded
2002/06 - 2005/12 Assessing phylogeographic patterns and levels of introgression in the Iberian hare, Lepus granatensis
Provided by PTCRIS: 41457
Principal investigator
Fundação para a Ciência e a Tecnologia, I.P.
2002 - 2005 A importância da caracterização genética do coelho-bravo (Oryctolagus cuniculus) e da lebre (Lepus granatensis) na gestão e ordenamento das suas populações..
69671
Principal investigator
Fundação para a Ciência e a Tecnologia
Concluded

Other

Designation Funders
2019/07/01 - Current Inventariação de mamíferos de pequeno porte (Ordens Eulipotyphla, Rodentia e Lagomorpha) - Revisão do Livro Vermelho dos Mamíferos de Portugal Continental e contributo para a avaliação do estado de conservação das espécies
POSEUR-03-225-FC-000097
FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências, Portugal

Universidade de Évora, Portugal
FCiênciasID Associação para a Investigação e Desenvolvimento de Ciências
Ongoing
Outputs

Publications

Book
  1. Mathias, Maria Da Luz; Fonseca, Carlos; Rodrigues, Luisa; Grilo, Clara; Lopes-Fernandes, Margarida; M. Palmeirim, Jorge; Santos-Reis, Margarida; et al. Livro Vermelho dos Mamíferos de Portugal Continental. FCiências.ID / ICNF. 2023.
  2. Smith, A.T.; Johnston, C.H.; Alves, P.C.; Hackländer, K.. Lagomorphs: Pikas, rabbits, and hares of the world. 2018.
  3. ALVES, Paulo C. Monterroso, P., Queirós, J., Santos, N., Rodrigues, T.M., Rodrigues, M.M., Santos, E., Gonçalves, D. & Alves, P.C. (2016) Boas práticas na gestão cinegética. CIBIO/InBIO, ICNF & Câmara Municipal de Mértola.. Portugal: CIBIO/InBIO, ICNF & Câmara Municipal de Mértola.. 2016.
    Published
  4. Monterroso, Pedro Seabra; Queirós, João; Santos, Nuno; Rodrigues, Tiago M.; Rodrigues, Marisa; Santos, Emídio; Gonçalves, David; ALVES, Paulo C. Good practices in Game Management. Portugal: CIBIO/InBIO, ICNF & Câmara Municipal de Mértola. 2016.
    Published
  5. ALVES, Paulo C. Ferreira C., Rodrigues T., Leitão M., Paupério J., Gonçalves D. & Alves P.C. (2012). Gestão de Recursos Cinegéticos no Arquipélago dos Açores – O Coelho-bravo. CIBIO-UP e Direcção Regional dos Recursos Florestais, Porto.. Portugal: CIBIO-UP e Direcção Regional dos Recursos Florestais, Açores.. 2012.
    Published
  6. ALVES, Paulo C. Lagomorph Biology: Evolution, Ecology and Conservation. Berlin, Germany: Springer Berlin Heidelberg. 2008.
    Published • 10.1007/978-3-540-72446-9 • Editor
  7. ALVES, Paulo C. Ferreira, C. & Alves, P.C. (2006). Gestão de populações de Coelho-bravo (Oryctolagus cuniculus algirus). Federação Alentejana de Caçadores, Beja.188pp. Portugal: Federação Alentejana de Caçadores. 2006.
    Published • Editor
  8. Carvalho, João Paulo Fidalgo de, coord.; Santos, José António dos; Reimão, Dario; Gallardo, Juan F.; Alves, Paulo Célio; Grosso-Silva, José M.; Santos, Tiago M. dos; et al. O Carvalho Negral. Sersilito. 2005.
Book chapter
  1. Melo-Ferreira, J.; Alves, P.C.. "Melo-Ferreira J, Alves PC (2018.) Lagomorph Systematics. in Lagomorphs of the World. John Hopkins University Press.". In Lagomorphs of the World., 9-12. Germany: John Hopkins University Press., 2018.
    Published
  2. ALVES, Paulo C. "Ferreras P, Díaz-Ruiz F, Alves PC, & Monterroso P (2016) Factores de la coexistencia de mesocarnívoros en Parques Nacionales de ambiente mediterráneo. In: Mengual, P (ed.). Proyectos de Investigación en Parques Nacionales 2011-2014. Organismo Autónomo Parques Nacionales.". In Proyectos de Investigación en Parques Nacionales 2011-2014. Organismo Autónomo Parques Nacionales., 2016.
    Published
  3. Ferreras, Pablo; Díaz-Ruiz, Francisco; ALVES, Paulo C; Monterroso, Pedro Seabra. "Factors affecting the coexistence of mesocarnivores in Mediterranean National Parks". In Research Projects in National Parks, 321-339. Madrid, Spain: Organismo Autónomo Parques Nacionales, MAGRAMA, 2016.
    Published
  4. Herman, J.S.; Paupério, J.; Alves, P.C.; Searle, J.B.. "166. Herman JS, Paupério J, Alves PC, Searle JB (2014). Land bridge calibration rates of molecular evolution in a widespread rodent. Proceedings of the Evolutionary Biology Meeting in Marseille (17th 2013) Marseille, France.". In Proceedings of the Evolutionary Biology Meeting in Marseille (17th 2013) Marseille,. Marseille, France, 2014.
    Published
  5. ALVES, Paulo C. "Janecka J, Alves PC, Karmacharya D, Samsel N, Tallmon D, Schwartz M, Cheng E (2014). Wildlife genetics in rugged landscapes: methods, applications, and examples. In LS Mills & T Tempa (Eds), Wildlife Research Techniques in Rugged Mountainous Landscapes, Bhutan: Ugyen Wangchuck Institute for Conservation and Environment.". In Wildlife Research Techniques in Rugged Mountainous Landscapes, Bhutan: . LS Mills & T Tempa (Eds),. Themphu: Ugyen Wangchuck Institute for Conservation and Environment., 2014.
    Published
  6. ALVES, Paulo C. "Melo-Ferreira J, Alves PC (2009). Evolutionary Hstory, Taxonomy and Genetics of the broom hare. in Situación y conservación de la liebre de piornal Lepus castroviejoi en la Cordillera Cantabrica. (eds. F. Ballesteros, B. Palacios), pp. 17-27. OAPN, Ministerio de Medio Ambiente y Medio Rural y Marino, Spain.". In Situación y conservación de la liebre de piornal Lepus castroviejoi en la Cordillera Cantabrica, 17-27. Spain: OAPN, Ministerio de Medio Ambiente y Medio Rural y Marino, 2009.
    Published
  7. ALVES, Paulo C. "Ballesteros F, Palacios B, Miguel SA, Gostazar C, Alonso G, Alves PC, Palacios J, Rodriguez M, Saez-Buruaga M (2009). El futuro de una espécie poco conhecida en una paisaje cambiante: propuestas para la gestión y conservación de la liebre de Piornal. in Situación y conservación de la liebre de piornal Lepus castroviejoi en la Cordillera Cantabrica. (eds. F. Ballesteros, B. Palacios), pp. 119-". In Situación y conservación de la liebre de piornal Lepus castroviejoi en la Cordillera Cantabrica, 119-139. Spain: OAPN, Ministerio de Medio Ambiente y Medio Rural y Marino,, 2009.
    Published
  8. ALVES, Paulo C. "Hackländer K, Ferrand N & Alves PC (2008). An overview on Lagomorph research. In: P.C. Alves, N. Ferrand, and K. Hackländer (Eds.) Lagomorph Biology: Evolution, Ecology, and Conservation. pag Springer-Verlag, Berlin Heidelberg: 381-391". In Lagomorph Biology: Evolution, Ecology, and Conservation, 381-391. Berlin, Germany: Springer Berlin Heidelberg, 2008.
    Published
  9. Lopez-Martinez, Nieves. "Alves PC & Hackländer K (2008). Lagomorph species: Geographical distribution and conservation status. In: P.C. Alves, N. Ferrand, and K. Hackländer (Eds.) Lagomorph Biology: Evolution, Ecology, and Conservation. Springer-Verlag, Berlin Heidelberg: 395-405.". In Lagomorph Biology: Evolution, Ecology,, 395-405. Berlin, Germany: Springer Berlin Heidelberg, 2008.
    Published
  10. ALVES, Paulo C. "Carvalho J, Alves PC, Grosso-Silva J & Múrias dos Santos T (2007). Biologia e ecologia das florestas de carvalho-negral. In: Árvores e Florestas de Portugal. Vol. II - Os carvalhais, um património a conservar.". In Os carvalhais, um património a conservar, 99-118. Lisboa, Portugal: Público/LPN, 2007.
    Published
  11. ALVES, Paulo C. "Carvalho J, Alves PC, Grosso-Silva J & Múrias dos Santos T (2007). Biologia e ecologia do carvalho-roble. In: Árvores e Florestas de Portugal. Vol. II - Os carvalhais, um património a conservar. Público/LPN (Eds). Lisboa. 185-201.". In Árvores e Florestas de Portugal. Vol. II - Os carvalhais, um património a conservar, 185-201. Lisboa: Público/LPN, 2007.
    Published
  12. ALVES, Paulo C. "Alves PC & Melo-Ferreira J (2007). Are Lepus corsicanus and L. castroviejoi conspecific? Evidence from the analysis of nuclear markers. In de Filippo G., De Riso L., Riga F., Trocchi V. & Troisi S.R. (Eds). Conservazione di Lepus corsicanus stato delle conoscenze. IGF Publ., Napoli, Italia: 45-52.". In Istoria dello stato presente dell'Imperio Ottomano : Nella quale si contengono le massime politiche de' Turchi, I punti principali della Religione Mahomettana, le sette, le eresie, e gli ordini diversi de' suoi religiosi, la disciplina militare, il conto essatto delle forze per mare, e per terra, e delle rendite dello stato loro / composta prima in lingua Inglese dal Sig. Ricaut, Scudiere, Segreta, 45-52. Napoli, Italy: IGF Publ.,, 2007.
  13. ALVES, Paulo C. "Ferreira, C. & Alves, P.C. (2006). A gestão das populações de coelho-bravo (Oryctolagus cuniculus algirus) e dos seus habitats. Pp.: 17- 33. In: C. Fonseca (coord.). Gestão das populações cinegéticas e dos seus habitats. Federação de Caça e Pesca da Beira Litoral. Coimbra.". In Gestão das populações cinegéticas e dos seus habitats., 17-33. Coimbra, Portugal: Federação de Caça e Pesca da Beira Litoral., 2006.
  14. ALVES, Paulo C. "Esteves, P., Alves, P.C. & Ferrand, N. (2006). O uso de marcadores na gestão e conservação de populações de coelho-bravo (Oryctolagus cuniculus algirus): 11-30. In: C. Ferreira & P.C. Alves (Coord.). Gestão de populações de coelho-bravo (Oryctolagus cuniculus algirus). Federação Alentejana de Caçadores (Eds).". In Gestão de populações de coelho-bravo (Oryctolagus cuniculus algirus). C. Ferreira & P.C. Alves (Coord.), 11-30. Portugal: Federação Alentejana de Caçadores., 2006.
    Published
  15. ALVES, Paulo C. "Paupério, J., Ferreira, C. & Alves, P.C. (2006). Aspectos gerais da biologia do coelho-bravo (Oryctolagus cuniculus algirus): 31-48. In: C. Ferreira & P.C. Alves (Coord.). Gestão de populações de coelho-bravo (Oryctolagus cuniculus algirus). Federação Alentejana de Caçadores (Eds), Beja.". In Gestão de populações de coelho-bravo (Oryctolagus cuniculus algirus), 31-48. Beja, Portugal: Federação Alentejana de Caçadores., 2006.
    Published
  16. ALVES, Paulo C. "Alves P.C., Grosso-Silva J. M. & Múrias dos Santos T., (2005). Fauna, 76-85. In: João P. Carvalho. O Carvalho-Negral. UTAD-Sersilito, Vila Real, 208 pp.". In O Carvalho-Negral, 76-85. Vila Real, Portugal: UTAD-Sersilito, Vila Real,, 2005.
    Published
  17. ALVES, Paulo C. "Queiroz, I. (coord), ALVES, P.C. et al. (2005). Mamíferos. In: Cabral et al. (Eds). Livro Vermelho dos Vertebrados Portugueses. Editado pelo Instituto da Conservação da Natureza. Lisboa.". In Livro Vermelho dos Vertebrados Portugueses.. Lisboa, Portugal: Instituto da Conservação da Natureza.., 2005.
    Published
  18. Queiroz, Ana Isabel; Mira, António; Barroso, Inês; Palmeirim, Jorge; Freitas, Luís; Rodrigues, Luisa; Fernandes, Margarida; et al. "MAMÍFEROS. Livro Vermelho dos Vertebrados de Portugal.". ICN, 2005.
  19. ALVES, Paulo C. "Alves, P.C & Niethammer, J. (2003). Die iberischen Hasen. In: Jochen Niethammer und Franz Krapp.". In Handbuch der Säugetiere Europas. Band 3/II (herausgegeben von Franz Krapp). Aula-Verlag., 137-154. Germany, 2003.
    Published
Conference abstract
  1. Ferraz, G.; Pacheco, C; Tizón, M. ; Marques, Ana Teresa; ALVES, Paulo C; Silva, João Paulo; Mougeot, Francois. "GPS tracking and Accelerometery as tools to remotely detect and monitor the breeding of two declining steppe birds". Paper presented in I Jornada Técnica del GIAE ¿ I Conferência Técnica do GIAE., Madrid, 2023.
    Published
  2. Ferraz, G.; Pacheco, C; Marques, Ana Teresa; ALVES, Paulo C; Silva, João Paulo; Mougeot, Francois. "Using GPS and accelerometer data to study the breeding behaviour of two sandgrouse species.". Paper presented in EUO: 14th European Ornithologists' Union Congress, Lund, 2023.
    Published
  3. Pinho, Catarina J.; Santos, Bárbara; Mata, Vanessa A.; Lopes, Ricardo Jorge; Romeiras, Maria; Lopes, Evandro; ALVES, Paulo C; Emerson, Brent; Vasconcelos, Raquel. "Table for two: diet composition differences of allopatric and sympatric populations of island geckos". Paper presented in XIX Annual Meeting of Portuguese Association for Evolutionary Biology, Lisboa, 2023.
  4. Pinho, Catarina J.; Santos, Bárbara; Mata, Vanessa A.; Romeiras, Maria; Lopes, Ricardo Jorge; Lopes, Evandro; ALVES, Paulo C; Emerson, Brent; Vasconcelos, Raquel. "Table for two: diet composition differences of the threatened geckos Tarentola gigas and Tarentola raziana in allopatry vs sympatry". Paper presented in BES Annual Meeting, Edinburgh, 2022.
  5. Pinho, Catarina J.; Emerson, Brent; ALVES, Paulo C; Vasconcelos, Raquel. "Big and small ¿ how do we fit all? An integrative framework for investigating character displacement". Paper presented in BIODIV Annual Meeting 2021, Virtual Event, 2021.
  6. Beja, Pedro; Paupério, Joana; Martins, Filipa; Filipe, Ana Filipa; Rebelo, Hugo; Ferreira, Sónia; Mata, Vanessa A.; et al. "Barcoding LTER Biodiversity: A Case Study and Applications in LTER Sabor (Portugal)". Paper presented in ILTER Open Science Meeting 2016, Kruger National Park, 2016.
    Published
Conference poster
  1. Sampaio, Sara; Joana Maria Jorge Pereira de Castro Paupério; Queiros, Joao; Joana Pinto; Quaglietta, Lorenzo; ALVES, Paulo C; Beja, Pedro. "Feeding ecology of the Pyrenean desman in NW Iberia revealed by DNA metabarcoding: the role of habitat suitability". Paper presented in Trends in Biodiversity and Evolution - TiBE2020, 2020.
  2. Sampaio, Sara; Sara Cáceres; Alexander Gómez-Lépiz; Joana Maria Jorge Pereira de Castro Paupério; ALVES, Paulo C. "DNA barcoding reveals hidden genetic diversity in small mammals of Costa Rica". Paper presented in XV Encontro Nacional de Biologia Evolutiva, 2019.
  3. Moraes-Barros, N.; Lopes, Ricardo Jorge; Gonçalves, David; Álvares, Francisco; Martins, F.; Rebelo, Hugo; Paupério, J.; et al. "The importance of Portugal as a main route for wildlife traffic between neotropics and Europe". Paper presented in TiBE2016, Trends in Biodiversity and Evolution: Tropical Biodiversity, 2016.
  4. Lopes, Ana M; Correia, Jorge Manuel de Jesus; Melo, Pedro; Ramada, Margarida; Magalhães, M. J.; ALVES, Paulo C; Esteves, Pedro; Abrantes, Joana. "Replacement of rabbit hemorrhagic disease virus (RHDV) genogroup 1 by new variant RHDV2 in Portugal". Paper presented in 3rd European Association of Veterinary Laboratory Diagnosticians Congress, 2014.
  5. Farelo, Liliana; ALVES, Paulo C; Boursot, Pierre; Ferrand, Nuno; Melo-Ferreira, José. "Ancient hybridization between hare species: evidence for a large X-effect on speciation?". Paper presented in Trends in Biodiversity and Evolution - TiBE2011, 2011.
  6. Farelo, Liliana; ALVES, Paulo C; Boursot, Pierre; Ferrand, Nuno; Melo-Ferreira, José. "The role of the X chromosome on reticulate evolution in hares (Lepus spp.).". Paper presented in Trends in Biodiversity and Evolution - TiBE2010, 2010.
  7. Farelo, Liliana; Godinho, Raquel; Gonçalves, David; Ferrand, Nuno; Geraldes, Armando; ALVES, Paulo C. "What can genetics tell us about the European rabbit (Oryctolagus cuniculus) restocking operations in Iberian Peninsula?". Paper presented in XXIX International Union of Game Biologists IUGB Congress, 2009.
  8. Farelo, Liliana; Godinho, Raquel; Gonçalves, David; Ferrand, Nuno; Geraldes, Armando; ALVES, Paulo C. "What can genetics tell us about the European rabbit (Oryctolagus cuniculus) restocking operations in Portugal?". Paper presented in 3rd World Lagomorph Conference, 2008.
Journal article
  1. Peter B. Pearman; Olivier Broennimann; Tsipe Aavik; Tamer Albayrak; Paulo C. Alves; F. A. Aravanopoulos; Laura D. Bertola; et al. "Monitoring of species’ genetic diversity in Europe varies greatly and overlooks potential climate change impacts". Nature Ecology & Evolution (2024): https://doi.org/10.1038/s41559-023-02260-0.
    10.1038/s41559-023-02260-0
  2. Mafalda S. Ferreira; Timothy J. Thurman; Matthew R. Jones; Liliana Farelo; Alexander V. Kumar; Sebastian M. E. Mortimer; John R. Demboski; et al. "The evolution of white-tailed jackrabbit camouflage in response to past and future seasonal climates". Science (2023): https://doi.org/10.1126/science.ade3984.
    10.1126/science.ade3984
  3. Laura Lux; Rainer G. Ulrich; Sérgio Santos-Silva; João Queirós; Christian Imholt; Christian Klotz; Joana Paupério; et al. "Detection and Molecular Characterization of Giardia and Cryptosporidium spp. Circulating in Wild Small Mammals from Portugal". Animals (2023): https://doi.org/10.3390/ani13030515.
    10.3390/ani13030515
  4. Antonio J. Carpio; João Queirós; Eduardo Laguna; Saúl Jiménez-Ruiz; Joaquín Vicente; Paulo C. Alves; Pelayo Acevedo. "Understanding the impact of wild boar on the European wild rabbit and red-legged partridge populations using a diet metabarcoding approach". European Journal of Wildlife Research (2023): https://doi.org/10.1007/s10344-023-01647-5.
    10.1007/s10344-023-01647-5
  5. Peralta, Dinora; Vaz-Freire, Teresa; Ferreira, Clara; Mendes, Tiago; Mira, Antonio; Santos, Sara; Alves, Paulo C.; et al. "From species detection to population size indexing: the use of sign surveys for monitoring a rare and otherwise elusive small mammal". European Journal of Wildlife Research (2023): https://publons.com/wos-op/publon/56911136/.
    10.1007/S10344-022-01634-2
  6. Lopes, Ana M.; Almeida, Tereza; Diz, Silvia; Corte-Real, Joao V.; Osorio, Hugo C.; Ramilo, David W.; Rebelo, Maria Teresa; et al. "The potential role of scavenging flies as mechanical vectors of Lagovirus europaeus/GI.2". Virology Journal (2023): https://publons.com/wos-op/publon/60923369/.
    10.1186/S12985-023-02065-4
  7. Pauperio, Joana; Gonzalez, Luis Martin; Martinez, Jesus; Gonzalez, Marcos; Martins, Filipa M. S.; Verissimo, Joana; Puppo, Pamela; et al. "The InBIO barcoding initiative database: DNA barcodes of Iberian Trichoptera, documenting biodiversity for freshwater biomonitoring in a Mediterranean hotspot". Biodiversity Data Journal (2023): https://publons.com/wos-op/publon/55403881/.
    10.3897/BDJ.11.E97484
  8. Coelho, Joana; Pacheco, Henrique; Rafael, Marta; Jimenez-Ruiz, Saul; Alves, Paulo Celio; Santos, Nuno. "Dynamics of Humoral Immunity to Myxoma and Rabbit Hemorrhagic Disease Viruses in Wild European Rabbits Assessed by Longitudinal Semiquantitative Serology". Microbiology Spectrum (2023): https://publons.com/wos-op/publon/61101508/.
    10.1128/SPECTRUM.00050-23
  9. Illarietti, Tommaso; Acevedo, Pelayo; Alves, Paulo; Jung, Thomas S.; Kierdorf, Horst; Lach, Gilliard; Lopez-Olvera, Jorge; et al. "18 years of the European Journal of Wildlife Research: profile and prospects". European Journal of Wildlife Research (2023): https://publons.com/wos-op/publon/56487081/.
    10.1007/S10344-022-01635-1
  10. Costa, Jose; Queiros, Joao; Ballesteros, Fernando; Mucci, Nadia; Souto, Joao; Silva, Eugenio; Melo-Ferreira, Jose; Alves, Paulo Celio. "Low genetic diversity and shallow population structure in the broom hare, Lepus castroviejoi (Lagomorpha: Leporidae)". Biological Journal of the Linnean Society (2023): https://publons.com/wos-op/publon/62931723/.
    10.1093/BIOLINNEAN/BLAD080
  11. Nussberger, Beatrice; Barbosa, Soraia; Beaumont, Mark; Currat, Mathias; Devillard, Sebastien; Heurich, Marco; Howard-McCombe, Jo; et al. "A common statement on anthropogenic hybridization of the European wildcat (Felis silvestris)". Frontiers in Ecology and Evolution (2023): https://publons.com/wos-op/publon/62711845/.
    10.3389/FEVO.2023.1156387
  12. Rajbhandari, Rajesh Man; Napit, Rajindra; Manandhar, Prajwol; Raut, Roji; Gurung, Anupama; Poudel, Ajit; Shrestha, Nisha; et al. "Phylogenomic analysis supports Mycobacterium tuberculosis transmission between humans and elephants". Frontiers in Veterinary Science (2023): https://publons.com/wos-op/publon/61553890/.
    10.3389/FVETS.2023.1133823
  13. Jimenez-Ruiz, Saul; Rafael, Marta; Coelho, Joana; Pacheco, Henrique; Fernandes, Manuel; Alves, Paulo Celio; Santos, Nuno. "High Mortality of Wild European Rabbits during a Natural Outbreak of Rabbit Haemorrhagic Disease GI.2 Revealed by a Capture-Mark-Recapture Study". Transboundary and Emerging Diseases (2023): https://publons.com/wos-op/publon/60935309/.
    10.1155/2023/3451338
  14. Marques, João Pedro; ALVES, Paulo C; Rosário, Isabel Amorim do; Lopes, Ricardo J.; Moura, Mónica; Meyers, Gene; Sim-Sim, Manuela; et al. "Building a Portuguese Coalition for Biodiversity Genomics". (2023): http://hdl.handle.net/10400.3/6825.
    10.32942/X20W3Q
  15. Theissinger, Kathrin; Fernandes, C; Formenti, Giulio; Bista, Iliana; Berg, Paul R.; Bleidorn, Christoph; Bombarely, Aureliano; et al. "How genomics can help biodiversity conservation". (2023): http://hdl.handle.net/10451/58355.
    10.1016/j.tig.2023.01.005
  16. Peralta, Dinora; Vaz Freire, Teresa; Ferreira, Clara; Mendes, Tiago; Mira, António; Santos, Sara; Alves, Paulo Célio; et al. "From species detection to population size indexing: The use of sign surveys for monitoring an elusive small mammal". (2023): http://hdl.handle.net/10174/34958.
    https://doi.org/10.1007/s10344-022-01634-2
  17. Mestre, Frederico; Barbosa, Soraia; Garrido-García, José António; Pita, Ricardo; Mira, António; Alves, Paulo Célio; Paupério, Joana; Searle, Jeremy B.; Beja, Pedro. "Inferring past refugia and range dynamics through the integration of fossil, niche modelling and genomic data". (2023): http://hdl.handle.net/10174/33333.
    https://doi.org/10.1111/jbi.14492
  18. Alberto Moraga-Fernández; Marta Sánchez-Sánchez; João Queirós; Ana M. Lopes; Joaquín Vicente; Xosé Pardavila; Jorge Sereno-Cadierno; et al. "A study of viral pathogens in bat species in the Iberian Peninsula: identification of new coronavirus genetic variants". International Journal of Veterinary Science and Medicine (2022): https://doi.org/10.1080/23144599.2022.2139985.
    10.1080/23144599.2022.2139985
  19. Henry D. Kunerth; Joaquim T. Tapisso; Raul Valente; Maria da Luz Mathias; Paulo C. Alves; Jeremy B. Searle; Rodrigo Vega; Joana Paupério. "Characterising Mitochondrial Capture in an Iberian Shrew". Genes (2022): https://doi.org/10.3390/genes13122228.
    10.3390/genes13122228
  20. Frederico Mestre; Soraia Barbosa; José A. Garrido-García; Ricardo Pita; António Mira; Paulo C. Alves; Joana Paupério; Jeremy B. Searle; Pedro Beja. "Inferring past refugia and range dynamics through the integration of fossil, niche modelling and genomic data". Journal of Biogeography (2022): https://doi.org/10.1111/jbi.14492.
    10.1111/jbi.14492
  21. Margarita Villar; Rajesh Man Rajbhandari; Sara Artigas-Jerónimo; Marinela Contreras; Amir Sadaula; Dibesh Karmacharya; Paulo Célio Alves; Christian Gortázar; José de la Fuente. "Differentially Represented Proteins in Response to Infection with Mycobacterium tuberculosis Identified by Quantitative Serum Proteomics in Asian Elephants". Pathogens (2022): https://doi.org/10.3390/pathogens11091010.
    10.3390/pathogens11091010
  22. Clara Grilo; Beatriz C. Afonso; Filipe Afonso; Marta Alexandre; Sara Aliácar; Ana Almeida; Ivan Prego Alonso; et al. "MAMMALS IN PORTUGAL : A data set of terrestrial, volant, and marine mammal occurrences in P ortugal". Ecology (2022): https://doi.org/10.1002/ecy.3654.
    10.1002/ecy.3654
  23. Gonzalez-Barrio, David; Diezma-Diaz, Carlos; Queiros, Joao; Alves, Paulo C.; Velarde, Roser; Estruch, Josep; Vieira-Pinto, Madalena; Alvarez-Garcia, Gema. "Absence of anti-Besnoitia spp. specific antibodies in European wild lagomorphs from the Iberian Peninsula". Transboundary and Emerging Diseases (2022): https://publons.com/wos-op/publon/55287349/.
    10.1111/TBED.14730
  24. Queiros, Joao; Barros, Silvia C.; Sanchez-Cano, Alberto; Henriques, Ana Margarida; Fagulha, Teresa; dos Santos, Fabio Abade; Duarte, Margarida D.; et al. "Bagaza Virus in Wild Birds, Portugal, 2021". Emerging Infectious Diseases (2022): https://publons.com/wos-op/publon/53135152/.
    10.3201/EID2807.212408
  25. Pacheco, Henrique; Lopes, Ana M.; Barcena, Juan; Blanco, Esther; Abrantes, Joana; Esteves, Pedro; Choquet, Remi; Alves, Paulo Celio; Santos, Nuno. "Multi-event capture-recapture models estimate the diagnostic performance of serological tests for myxoma and rabbit haemorrhagic disease viruses in the absence of reference samples". Transboundary and Emerging Diseases (2022): https://publons.com/wos-op/publon/53178072/.
    10.1111/TBED.14657
  26. Rajbhandari, Rajesh Man; de la Fuente, Jose; Karmacharya, Dibesh; Mathema, Sujala; Maharjan, Bijay; Dixit, Sameer Mani; Shrestha, Nisha; et al. "Understanding Mycobacterium tuberculosis complex in elephants through a One Health approach: a systematic review". BMC Veterinary Research (2022): https://publons.com/wos-op/publon/53135154/.
    10.1186/S12917-022-03356-8
  27. Nilson, Sara M.; Gandolfi, Barbara; Grahn, Robert A.; Kurushima, Jennifer D.; Lipinski, Monika J.; Randi, Ettore; Waly, Nashwa E.; et al. "Genetics of randomly bred cats support the cradle of cat domestication being in the Near East". Heredity (2022): https://publons.com/wos-op/publon/55287350/.
    10.1038/S41437-022-00568-4
  28. Abade dos Santos, Fabio A.; Santos, Nuno; Carvalho, Carina L.; Martinez-Haro, Monica; Gortazar, Christian; Garcia-Bocanegra, Ignacio; Capucci, Lorenzo; Duarte, Margarida; Alves, Paulo Celio. "Retrospective serological and molecular survey of myxoma or antigenically related virus in the Iberian hare, Lepus granatensis". Transboundary and Emerging Diseases (2022): https://publons.com/wos-op/publon/54626081/.
    10.1111/TBED.14734
  29. Santos, Nuno; Ferreras Colino, Elisa; Cruz Arnal, Maria; Fernandez de Luco, Daniel; Sevilla, Iker; Garrido, Joseba M.; Fonseca, Eliana; et al. "Complementary roles of wild boar and red deer to animal tuberculosis maintenance in multi-host communities". Epidemics (2022): https://publons.com/wos-op/publon/54626061/.
    10.1016/J.EPIDEM.2022.100633
  30. Matias, Gonçalo; Rosalino, L. M.; Alves, Paulo Célio; Tiesmeyer, Annika; Nowak, Carsten; Ramos, Luana; Steyer, Katharina; et al. "Genetic integrity of European wildcats: Variation across biomes mandates geographically tailored conservation strategies". Biological Conservation (2022): http://hdl.handle.net/10451/51849.
    10.1016/j.biocon.2022.109518
  31. Pablo Ferreras; José Jiménez; Francisco Díaz-Ruiz; Jorge Tobajas; Paulo Célio Alves; Pedro Monterroso. "Integrating multiple datasets into spatially-explicit capture-recapture models to estimate the abundance of a locally scarce felid". Biodiversity and Conservation (2021): https://doi.org/10.1007/s10531-021-02309-1.
    10.1007/s10531-021-02309-1
  32. M. Rocha; A. Serronha; M. Rodrigues; P. C. Alves; P. Monterroso. "Comfort over safety: thermoregulation overshadows predation risk effects in the activity of a keystone prey". Journal of Zoology (2021): https://doi.org/10.1111/jzo.12947.
    10.1111/jzo.12947
  33. Antonio J. Carpio; José Melo-Ferreira; Mónica Martinez-Haro; Liliana Farelo; Rita Campos; Paulo C. Alves; Pelayo Acevedo; Cynthia Riginos. "Iberian hares with anciently introgressed mitochondrial DNA express a marginal environmental niche". Journal of Biogeography 48 9 (2021): 2328-2336. https://doi.org/10.1111/jbi.14155.
    10.1111/jbi.14155
  34. Martins, F.M.S.; Feio, M.J.; Porto, M.; Filipe, A.F.; Bonin, A.; Serra, S.R.Q.; Alves, P.C.; Taberlet, P.; Beja, P.. "Assessing changes in stream macroinvertebrate communities across ecological gradients using morphological versus DNA metabarcoding approaches". Science of the Total Environment 797 (2021): http://www.scopus.com/inward/record.url?eid=2-s2.0-85111048062&partnerID=MN8TOARS.
    10.1016/j.scitotenv.2021.149030
  35. Genova, F.; Nonnis, S.; Maffioli, E.; Tedeschi, G.; Strillacci, M.G.; Carisetti, M.; Sironi, G.; et al. "Multi-omic analyses in Abyssinian cats with primary renal amyloid deposits". Scientific Reports 11 1 (2021): http://www.scopus.com/inward/record.url?eid=2-s2.0-85104488505&partnerID=MN8TOARS.
    10.1038/s41598-021-87168-0
  36. Lyons, L.A.; Buckley, R.M.; Harvey, R.J.; Abitbol, M.; Aberdein, D.; Alves, P.C.; Ohlsson Andersson, A.; et al. "Mining the 99 Lives Cat Genome Sequencing Consortium database implicates genes and variants for the Ticked locus in domestic cats (Felis catus)". Animal Genetics 52 3 (2021): 321-332. http://www.scopus.com/inward/record.url?eid=2-s2.0-85106068562&partnerID=MN8TOARS.
    10.1111/age.13059
  37. Cardoso, B.; García-Bocanegra, I.; Acevedo, P.; Cáceres, G.; Alves, P.C.; Gortázar, C.. "Stepping up from wildlife disease surveillance to integrated wildlife monitoring in Europe". Research in Veterinary Science (2021): http://www.scopus.com/inward/record.url?eid=2-s2.0-85119455137&partnerID=MN8TOARS.
    10.1016/j.rvsc.2021.11.003
  38. Ferreira, M.S.; Jones, M.R.; Callahan, C.M.; Farelo, L.; Tolesa, Z.; Suchentrunk, F.; Boursot, P.; et al. "The Legacy of Recurrent Introgression during the Radiation of Hares". Systematic biology 70 3 (2021): 593-607. http://www.scopus.com/inward/record.url?eid=2-s2.0-85100992065&partnerID=MN8TOARS.
    10.1093/sysbio/syaa088
  39. Alves, P.C.; Santos, N.; Alves, Paulo C.; Santos, Nuno. "Sex and age-specific hematology and biochemistry reference intervals of live Iberian hares (Lepus granatensis) and comparison with postmortem sampling". Journal of Wildlife Diseases 57 1 (2021): 178-183. http://www.scopus.com/inward/record.url?eid=2-s2.0-85099963107&partnerID=MN8TOARS.
    10.7589/JWD-D-19-00010
  40. Faria, João; Rodrigues, Tiago M.; Leitão, Manuel; Santos, Nuno; Gonçalves, David; ALVES, Paulo C; Monterroso, Pedro Seabra. "Interannual demographic stochasticity outweighs the effect of an emergent virus in insular European rabbits (Oryctolagus cuniculus)". Journal of Zoology (2021):
    Submitted
  41. Pedro Monterroso; Francisco Díaz-Ruiz; Paul M. Lukacs; Paulo C. Alves; Pablo Ferreras. "Ecological traits and the spatial structure of competitive coexistence among carnivores". Ecology (2020): https://doi.org/10.1002/ecy.3059.
    10.1002/ecy.3059
  42. Nuno Santos; Céline Richomme; Telmo Nunes; Joaquín Vicente; Paulo C. Alves; José de la Fuente; Margarida Correia-Neves; et al. "Quantification of the Animal Tuberculosis Multi-Host Community Offers Insights for Control". Pathogens 9 6 (2020): 421-421. https://doi.org/10.3390/pathogens9060421.
    10.3390/pathogens9060421
  43. João P Marques; Fernando A Seixas; Liliana Farelo; Colin M Callahan; Jeffrey M Good; W Ian Montgomery; Neil Reid; et al. "An Annotated Draft Genome of the Mountain Hare (Lepus timidus)". Genome Biology and Evolution (2020): https://doi.org/10.1093/gbe/evz273.
    10.1093/gbe/evz273
  44. Moutinho, A.F.; Serén, N.; Paupério, J.; Silva, T.L.; Martínez-Freiriá, F.; Sotelo, G.; Faria, R.; et al. "Evolutionary history of two cryptic species of northern African jerboas". BMC Evolutionary Biology 20 1 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85079336244&partnerID=MN8TOARS.
    10.1186/s12862-020-1592-z
  45. von Thaden, A.; Nowak, C.; Tiesmeyer, A.; Reiners, T.E.; Alves, P.C.; Lyons, L.A.; Mattucci, F.; et al. "Applying genomic data in wildlife monitoring: Development guidelines for genotyping degraded samples with reduced single nucleotide polymorphism panels". Molecular Ecology Resources (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85078846174&partnerID=MN8TOARS.
    10.1111/1755-0998.13136
  46. Ferreira, M.S.; Alves, P.C.; Callahan, C.M.; Giska, I.; Farelo, L.; Jenny, H.; Mills, L.S.; et al. "Transcriptomic regulation of seasonal coat color change in hares". Ecology and Evolution 10 3 (2020): 1180-1192. http://www.scopus.com/inward/record.url?eid=2-s2.0-85078071266&partnerID=MN8TOARS.
    10.1002/ece3.5956
  47. Tiesmeyer, A.; Ramos, L.; Manuel Lucas, J.; Steyer, K.; Alves, P.C.; Astaras, C.; Brix, M.; et al. "Range-wide patterns of human-mediated hybridisation in European wildcats". Conservation Genetics (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85078486482&partnerID=MN8TOARS.
    10.1007/s10592-019-01247-4
  48. Sauther, M.L.; Bertolini, F.; Dollar, L.J.; Pomerantz, J.; Alves, P.C.; Gandolfi, B.; Kurushima, J.D.; et al. "Taxonomic identification of Madagascar’s free-ranging “forest cats”". Conservation Genetics 21 3 (2020): 443-451. http://www.scopus.com/inward/record.url?eid=2-s2.0-85081388165&partnerID=MN8TOARS.
    10.1007/s10592-020-01261-x
  49. Queirós, J.; Gortázar, C.; Alves, P.C.. "Deciphering Anthropogenic Effects on the Genetic Background of the Red Deer in the Iberian Peninsula". Frontiers in Ecology and Evolution 8 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85086165032&partnerID=MN8TOARS.
    10.3389/fevo.2020.00147
  50. Cogné, B.; Latypova, X.; Senaratne, L.D.S.; Martin, L.; Koboldt, D.C.; Kellaris, G.; Fievet, L.; et al. "Mutations in the Kinesin-2 Motor KIF3B Cause an Autosomal-Dominant Ciliopathy". American Journal of Human Genetics (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85084790314&partnerID=MN8TOARS.
    10.1016/j.ajhg.2020.04.005
  51. Schai-Braun, S.C.; Lapin, K.; Bernhardt, K.-G.; Alves, P.C.; Hackländer, K.. "Effect of landscape type, elevation, vegetation period, and taxonomic plant identification level on diet preferences of Alpine mountain hares (Lepus timidus varronis)". European Journal of Wildlife Research 66 4 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85087126597&partnerID=MN8TOARS.
    10.1007/s10344-020-01398-7
  52. Jowers, M.J.; Queirós, J.; Pinto, R.R.; Ali, A.H.; Mutinda, M.; Angelone, S.; Alves, P.C.; Godinho, R.. "Genetic diversity in natural range remnants of the critically endangered hirola antelope". Zoological Journal of the Linnean Society 190 1 (2020): 384-395. http://www.scopus.com/inward/record.url?eid=2-s2.0-85097009450&partnerID=MN8TOARS.
    10.1093/zoolinnean/zlz174
  53. Buckley, R.M.; Gandolfi, B.; Creighton, E.K.; Pyne, C.A.; Bouhan, D.M.; Leroy, M.L.; Senter, D.A.; et al. "Werewolf, there wolf: Variants in hairless associated with hypotrichia and roaning in the lykoi cat breed". Genes 11 6 (2020): 1-15. http://www.scopus.com/inward/record.url?eid=2-s2.0-85086919782&partnerID=MN8TOARS.
    10.3390/genes11060682
  54. Yu, Y.; Creighton, E.K.; Buckley, R.M.; Lyons, L.A.; Aberdein, D.; Alves, P.C.; Barsh, G.S.; et al. "A deletion in GDF7 is associated with a heritable forebrain commissural malformation concurrent with ventriculomegaly and interhemispheric cysts in cats". Genes 11 6 (2020): 1-15. http://www.scopus.com/inward/record.url?eid=2-s2.0-85087033347&partnerID=MN8TOARS.
    10.3390/genes11060672
  55. Nicholas K. Fletcher; Pelayo Acevedo; Jeremy S. Herman; Joana Paupério; Paulo C. Alves; Jeremy B. Searle. "Glacial cycles drive rapid divergence of cryptic field vole species". Ecology and Evolution (2019): https://doi.org/10.1002/ece3.5846.
    10.1002/ece3.5846
  56. Federica Mattucci; Marco Galaverni; Leslie A. Lyons; Paulo C. Alves; Ettore Randi; Edoardo Velli; Luca Pagani; Romolo Caniglia. "Genomic approaches to identify hybrids and estimate admixture times in European wildcat populations". Scientific Reports (2019): https://doi.org/10.1038/s41598-019-48002-w.
    10.1038/s41598-019-48002-w
  57. Sara Lado; Paulo C. Alves; M. Zafarul Islam; José C. Brito; José Melo-Ferreira. "The evolutionary history of the Cape hare (Lepus capensis sensu lato): insights for systematics and biogeography". Heredity (2019): https://doi.org/10.1038/s41437-019-0229-8.
    10.1038/s41437-019-0229-8
  58. Filipa M. S. Martins; Mafalda Galhardo; Ana F. Filipe; Amílcar Teixeira; Paulo Pinheiro; Joana Paupério; Paulo C. Alves; Pedro Beja. "Have the cake and eat it: Optimizing nondestructive DNA metabarcoding of macroinvertebrate samples for freshwater biomonitoring". Molecular Ecology Resources (2019): https://doi.org/10.1111/1755-0998.13012.
    10.1111/1755-0998.13012
  59. Queirós, J.; Villar, M.; Hernández-Jarguín, A.; López, V.; Fernández de Mera, I.; Vicente, J.; Alves, P.C.; Gortazar, C.; Fuente, J.D.L.. "A metaproteomics approach reveals changes in mandibular lymph node microbiota of wild boar naturally exposed to an increasing trend of Mycobacterium tuberculosis complex infection". Tuberculosis 114 (2019): 103-112. http://www.scopus.com/inward/record.url?eid=2-s2.0-85058961265&partnerID=MN8TOARS.
    10.1016/j.tube.2018.12.003
  60. Queirós, J.; Acevedo, P.; Santos, J.P.V.; Barasona, J.; Beltran-Beck, B.; González-Barrio, D.; Armenteros, J.A.; et al. "Red deer in Iberia: Molecular ecological studies in a southern refugium and inferences on European postglacial colonization history". PLoS ONE 14 1 (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85059754822&partnerID=MN8TOARS.
    10.1371/journal.pone.0210282
  61. Proença-Ferreira, A.; Ferreira, C.; Leitão, I.; Paupério, J.; Sabino-Marques, H.; Barbosa, S.; Lambin, X.; et al. "Drivers of survival in a small mammal of conservation concern: An assessment using extensive genetic non-invasive sampling in fragmented farmland". Biological Conservation 230 (2019): 131-140. http://www.scopus.com/inward/record.url?eid=2-s2.0-85058983209&partnerID=MN8TOARS.
    10.1016/j.biocon.2018.12.021
  62. Velo-Antón, G.; Boratynski, Z.; Ferreira, C.M.; Lima, V.O.; Alves, P.C.; Brito, J.C.. "Intraspecific genetic diversity and distribution of North African hedgehogs (Mammalia: Erinaceidae)". Biological Journal of the Linnean Society 127 1 (2019): 156-163. http://www.scopus.com/inward/record.url?eid=2-s2.0-85072123818&partnerID=MN8TOARS.
    10.1093/biolinnean/blz030
  63. Schai-Braun, S.C.; Posautz, A.; Alves, P.C.; Hackländer, K.. "Gastrointestinal parasite infestation in the alpine mountain hare (Lepus timidus varronis): Are abiotic environmental factors such as elevation, temperature and precipitation affecting prevalence of parasite species?". International Journal for Parasitology: Parasites and Wildlife 9 (2019): 202-208. http://www.scopus.com/inward/record.url?eid=2-s2.0-85066239612&partnerID=MN8TOARS.
    10.1016/j.ijppaw.2019.05.009
  64. Encarnação, Cláudia; Medinas, Denis; Alves, Paulo Célio; Mira, António; Encarnação, C.; Medinas, D.; Alves, P.C.; Mira, A.. "Does short-term habitat management for the European rabbit (Oryctolagus cuniculus) have lasting effects?". Ecological Research (2019): http://hdl.handle.net/10174/27199.
    10.1111/1440-1703.1064
  65. Jowers, Michael J.; Alves, Paulo Celio. "MAMMALS OF KOREA". Journal of Mammalogy (2019): https://publons.com/wos-op/publon/34409662/.
    10.1093/JMAMMAL/GYZ169
  66. Ontiveros, Eric S.; Ueda, Yu; Harris, Samantha P.; Stern, Joshua A.; Lyons, Leslie A.; Gandolfi, Barbara; Aberdein, Danielle; et al. "Precision medicine validation: identifying the MYBPC3 A31P variant with whole-genome sequencing in two Maine Coon cats with hypertrophic cardiomyopathy". Journal of Feline Medicine and Surgery (2019): https://publons.com/wos-op/publon/17941455/.
    10.1177/1098612X18816460
  67. João Queirós; Paulo Célio Alves; Joaquín Vicente; Christian Gortázar; José de la Fuente. "Genome-wide associations identify novel candidate loci associated with genetic susceptibility to tuberculosis in wild boar". Scientific Reports 8 1 (2018): https://doi.org/10.1038/s41598-018-20158-x.
    10.1038/s41598-018-20158-x
  68. Matthew R. Jones; L. Scott Mills; Paulo Célio Alves; Colin M. Callahan; Joel M. Alves; Diana J. R. Lafferty; Francis M. Jiggins; et al. "Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares". Science 360 6395 (2018): 1355-1358. https://doi.org/10.1126/science.aar5273.
    10.1126/science.aar5273
  69. L. Scott Mills; Eugenia V. Bragina; Alexander V. Kumar; Marketa Zimova; Diana J. R. Lafferty; Jennifer Feltner; Brandon M. Davis; et al. "Winter color polymorphisms identify global hot spots for evolutionary rescue from climate change". Science 359 6379 (2018): 1033-1036. https://doi.org/10.1126/science.aan8097.
    10.1126/science.aan8097
  70. Rafati, Nima; Blanco-Aguiar, Jose A.; Rubin, Carl J.; Sayyab, Shumaila; Sabatino, Stephen J.; Afonso, Sandra; Feng, Chungang; et al. "A genomic map of clinal variation across the European rabbit hybrid zone". Molecular Ecology 27 6 (2018): 1457-1478. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000430183100010&KeyUID=WOS:000430183100010.
    10.1111/mec.14494
  71. Vasconcelos, Raquel; Razgour, Orly; Tarroso, Pedro; Fasola, Mauro; Carranza, Salvador; Alves, Paulo Cello. "Combining molecular and landscape tools for targeting evolutionary processes in reserve design: An approach for islands". Plos One 13 7 (2018): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000439749200011&KeyUID=WOS:000439749200011.
    10.1371/journal.pone.0200830
  72. Sabino-Marques, Helena; Ferreira, Clara Mendes; Pauperio, Joana; Costa, Pedro; Barbosa, Soraia; Encarnacao, Claudia; Alpizar-Jara, Russell; et al. "Combining genetic non-invasive sampling with spatially explicit capture-recapture models for density estimation of a patchily distributed small mammal". European Journal of Wildlife Research 64 4 (2018): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000438918800001&KeyUID=WOS:000438918800001.
    10.1007/s10344-018-1206-x
  73. Zimova, Marketa; Hacklaender, Klaus; Good, Jeffrey M.; Melo-Ferreira, Jose; Alves, Paulo Celio; Mills, L. Scott. "Function and underlying mechanisms of seasonal colour moulting in mammals and birds: what keeps them changing in a warming world?". Biological Reviews 93 3 (2018): 1478-1498. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000438196200009&KeyUID=WOS:000438196200009.
    10.1111/brv.12405
  74. Oliveira, Teresa; Urra, Fermin; Maria Lopez-Martin, Jose; Ballesteros-Duperon, Elena; Miguel Barea-Azcon, Jose; Moleon, Marcos; Maria Gil-Sanchez, Jose; et al. "Females know better: Sex-biased habitat selection by the European wildcat". Ecology and Evolution 8 18 (2018): 9464-9477. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000447756100028&KeyUID=WOS:000447756100028.
    10.1002/ece3.4442
  75. Ferreira, Clara Mendes; Sabino-Marques, Helena; Barbosa, Soraia; Costa, Pedro; Encarnacao, Claudia; Alpizar-Jara, Russell; Pita, Ricardo; et al. "Genetic non-invasive sampling (gNIS) as a cost-effective tool for monitoring elusive small mammals". European Journal of Wildlife Research 64 4 (2018): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000439225900002&KeyUID=WOS:000439225900002.
    10.1007/s10344-018-1188-8
  76. Barbosa, Soraia; Mestre, Frederico; White, Thomas A.; Pauperio, Joana; Alves, Paulo C.; Searle, Jeremy B.. "Integrative approaches to guide conservation decisions: Using genomics to define conservation units and functional corridors". Molecular Ecology 27 17 (2018): 3452-3465. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000442735900004&KeyUID=WOS:000442735900004.
    10.1111/mec.14806
  77. Silverio, D.; Lopes, A. M.; Melo-Ferreira, J.; Magalhaes, M. J.; Monterroso, P.; Serronha, A.; Maio, E.; et al. "Insights into the evolution of the new variant rabbit haemorrhagic disease virus (GI.2) and the identification of novel recombinant strains". Transboundary and Emerging Diseases 65 4 (2018): 983-992. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000437765800011&KeyUID=WOS:000437765800011.
    10.1111/tbed.12830
  78. Carvalho, Filipe; Lourenco, Andre; Carvalho, Rafael; Alves, Paulo C.; Mira, Antonio; Beja, Pedro; Lourenço, André; Alves, Paulo Célio; Mira, António. "The effects of a motorway on movement behaviour and gene flow in a forest carnivore: Joint evidence from road mortality, radio tracking and genetics". Landscape and Urban Planning 178 (2018): 217-227. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000442710400021&KeyUID=WOS:000442710400021.
    10.1016/j.landurbplan.2018.06.007
  79. Ben Slimen, Hichem; Awadi, Asma; Tolesa, Zelalem Gebremariam; Knauer, Felix; Alves, Paulo Celio; Makni, Mohamed; Suchentrunk, Franz. "Positive selection on the mitochondrial ATP synthase 6 and the NADH dehydrogenase 2 genes across 22 hare species (genus Lepus)". Journal of Zoological Systematics and Evolutionary Research 56 3 (2018): 428-443. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000437689700010&KeyUID=WOS:000437689700010.
    10.1111/jzs.12204
  80. Barbosa, Soraia; Pauperio, Joana; Pavlova, Svetlana V.; Alves, Paulo C.; Searle, Jeremy B.. "The Microtus voles: Resolving the phylogeny of one of the most speciose mammalian genera using genomics". Molecular Phylogenetics and Evolution 125 (2018): 85-92. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000432583900008&KeyUID=WOS:000432583900008.
    10.1016/j.ympev.2018.03.017
  81. Genova, F.; Longeri, M.; Lyons, L.A.; Bagnato, A.; Gandolfi, B.; Aberdein, D.; Alves, P.C.; et al. "First genome-wide CNV mapping in FELIS CATUS using next generation sequencing data". BMC Genomics 19 1 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85058212250&partnerID=MN8TOARS.
    10.1186/s12864-018-5297-2
  82. Monterroso, P.; Godinho, R.; Oliveira, T.; Ferreras, P.; Kelly, M.J.; Morin, D.J.; Waits, L.P.; Alves, P.C.; Mills, L.S.. "Feeding ecological knowledge: the underutilised power of faecal DNA approaches for carnivore diet analysis". Mammal Review (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85058956014&partnerID=MN8TOARS.
    10.1111/mam.12144
  83. Quaglietta, L.; Pauperio, J.; Martins, F. M. S.; Alves, P. C.; Beja, P.. "Recent range contractions in the globally threatened Pyrenean desman highlight the importance of stream headwater refugia". Animal Conservation 21 6 (2018): 515-525. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000453700100011&KeyUID=WOS:000453700100011.
    10.1111/acv.12422
  84. Ferreira, Clara; Sabino-Marques, Helena; Barbosa, Soraia; Costa, Pedro; Encarnação, Cláudia; Alpizar-Jara, Russell; Pita, Ricardo; et al. "Genetic non-invasive sampling (gNIS) as a cost-effective tool for monitoring elusive small mammals". (2018): http://hdl.handle.net/10174/24633.
    https://doi.org/10.1007/s10344-018-1188-8
  85. Sabino-Marques, Helena; Ferreira, Clara; Paupério, Joana; Costa, Pedro; Barbosa, Soraia; Encarnação, Cláudia; Alpizar- Jara, Russel; et al. "Combining genetic non-invasive sampling with spatially explicit capture-recapture models for density estimation of a patchily distributed small mammal". (2018): http://hdl.handle.net/10174/24616.
    https://doi.org/10.1007/s10344-018-1206-x
  86. Ana M. Lopes; Diogo Silvério; Maria J. Magalhães; Helena Areal; Paulo C. Alves; Pedro J. Esteves; Joana Abrantes. "Characterization of old RHDV strains by complete genome sequencing identifies a novel genetic group". Scientific Reports (2017): https://doi.org/10.1038/s41598-017-13902-2.
    10.1038/s41598-017-13902-2
  87. Lopes, Ana M; Magalhaes, Maria J; Alves, Paulo C; Esteves, Pedro J; Abrantes, Joana. "An update on the rabbit hemorrhagic disease virus (RHDV) strains circulating in Portugal in the 1990s: earliest detection of G3-G5 and G6.". Archives of virology (2017): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=MEDLINE&KeyUT=MEDLINE:28299483&KeyUID=MEDLINE:28299483.
    10.1007/s00705-017-3318-0
  88. Aberdein, Danielle; Munday, John S.; Gandolfi, Barbara; Dittmer, Keren E.; Malik, Richard; Garrick, Dorian J.; Lyons, Leslie A.; 99 Lives Consortium. "A FAS-ligand variant associated with autoimmune lymphoproliferative syndrome in cats". Mammalian Genome 28 1-2 (2017): 47-55. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000392315300006&KeyUID=WOS:000392315300006.
    10.1007/s00335-016-9668-1
  89. Oh, Annie; Pearce, Jacqueline W; Gandolfi, Barbara; Creighton, Erica K; Suedmeyer, William K; Selig, Michael; Bosiack, Ann P; et al. "Early-Onset Progressive Retinal Atrophy Associated with an IQCB1 Variant in African Black-Footed Cats (Felis nigripes).". Scientific reports 7 (2017): 43918-43918. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=MEDLINE&KeyUT=MEDLINE:28322220&KeyUID=MEDLINE:28322220.
    10.1038/srep43918
  90. Thulin, Carl-Gustaf; Alves, Paulo C.; Djan, Mihajla; Fontanesi, Luca; Peacock, David. "Wild opportunities with dedomestication genetics of rabbits". Restoration Ecology 25 3 (2017): 330-332. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000402012700002&KeyUID=WOS:000402012700002.
    10.1111/rec.12510
  91. Ferreira, Mafalda S.; Alves, Paulo C.; Callahan, Colin M.; Marques, Joao P.; Mills, L. Scott; Good, Jeffrey M.; Melo-Ferreira, Jose. "The transcriptional landscape of seasonal coat colour moult in the snowshoe hare". Molecular Ecology 26 16 (2017): 4173-4185. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000407255100006&KeyUID=WOS:000407255100006.
    10.1111/mec.14177
  92. Le Pendu, Jacques; Abrantes, Joana; Bertagnoli, Stephane; Guitton, Jean-Sebastien; Le Gall-Recule, Ghislaine; Lopes, Ana Margarida; Marchandeau, Stephane; et al. "Proposal for a unified classification system and nomenclature of lagoviruses". Journal of General Virology 98 7 (2017): 1658-1666. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000410256900010&KeyUID=WOS:000410256900010.
    10.1099/jgv.0.000840
  93. Silva, Teresa L.; Vale, Candida G.; Godinho, Raquel; Fellous, Amina; Hingrat, Yves; Alves, Paulo C.; Abaigar, Teresa; Brito, Jose C.. "Ecotypes and evolutionary significant units in endangered North African gazelles". Biological Journal of the Linnean Society 122 2 (2017): 286-300. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000412186500005&KeyUID=WOS:000412186500005.
    10.1093/biolinnean/blx064
  94. Marques, Joao P.; Ferreira, Mafalda S.; Farelo, Liliana; Callahan, Colin M.; Hacklander, Klaus; Jenny, Hannes; Montgomery, W. Ian; et al. "Data Descriptor: Mountain hare transcriptome and diagnostic markers as resources to monitor hybridization with European hares". Scientific Data 4 (2017): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000417034300001&KeyUID=WOS:000417034300001.
    10.1038/sdata.2017.178
  95. Rouco, C; Abrantes, J; Serronha, A; Lopes, A M; Maio, E; Magalhaes, M J; Blanco, E; et al. "Epidemiology of RHDV2 (Lagovirus europaeus/GI.2) in free-living wild European rabbits in Portugal.". Transboundary and emerging diseases (2017): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=MEDLINE&KeyUT=MEDLINE:29150915&KeyUID=MEDLINE:29150915.
    10.1111/tbed.12767
  96. Mauler, D A; Gandolfi, B; Reinero, C R; O'Brien, D P; Spooner, J L; Lyons, L A; 99 Lives Consortium; et al. "Precision Medicine in Cats: Novel Niemann-Pick Type C1 Diagnosed by Whole-Genome Sequencing.". Journal of veterinary internal medicine (2017): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=MEDLINE&KeyUT=MEDLINE:28233346&KeyUID=MEDLINE:28233346.
    10.1111/jvim.14599
  97. Ferreras, P.; Diaz-Ruiz, F.; Alves, P. C.; Monterroso, P.. "Optimizing camera-trapping protocols for characterizing mesocarnivore communities in south-western Europe". Journal of Zoology 301 1 (2017): 23-31. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000392498500004&KeyUID=WOS:000392498500004.
    10.1111/jzo.12386
  98. Marques, Joao P.; Farelo, Liliana; Vilela, Joana; Vanderpool, Dan; Alves, Paulo C.; Good, Jeffrey M.; Boursot, Pierre; Melo-Ferreira, Jose. "Range expansion underlies historical introgressive hybridization in the Iberian hare". Scientific Reports 7 (2017): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000392659600001&KeyUID=WOS:000392659600001.
    10.1038/srep40788
  99. Djan, Mihajla; Stefanovic, Milomir; Velickovic, Nevena; Lavadinovic, Vukan; Alves, Paulo C.; Suchentrunk, Franz. "Brown hares (Lepus europaeus Pallas, 1778) from the Balkans: a refined phylogeographic model". Hystrix-Italian Journal of Mammalogy 28 2 (2017): 186-193. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000450046400001&KeyUID=WOS:000450046400001.
    10.4404/hystrix-28.2-12202
  100. Barbosa, Soraia; Paupério, Joana; Herman, J.S.; Ferreira, C.M.; Pita, Ricardo; Vale, H.M.; Cabral, João; et al. "Endemic species may have complex histories: within refugium phylogeography of an endangered Iberian vole". Molecular Ecology 26 3 (2017): 951-967. http://hdl.handle.net/10174/22686.
    10.1111/mec.13994
  101. Fontanesi, Luca; Di Palma, Federica; Flicek, Paul; Smith, Andrew T.; Thulin, Carl-Gustaf; Alves, Paulo C.; Lagomorph Genomics Consortium. "LaGomiCs-Lagomorph Genomics Consortium: An International Collaborative Effort for Sequencing the Genomes of an Entire Mammalian Order". Journal of Heredity 107 4 (2016): 295-308. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000376877400001&KeyUID=WOS:000376877400001.
    10.1093/jhered/esw010
  102. Gargan, Laura M.; Cornette, Raphael; Yearsley, Jon M.; Montgomery, W. Ian; Pauperio, Joana; Alves, Paulo C.; Butler, Fidelma; et al. "Molecular and morphological insights into the origin of the invasive greater white-toothed shrew (Crocidura russula) in Ireland". Biological Invasions 18 3 (2016): 857-871. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000370657100019&KeyUID=WOS:000370657100019.
    10.1007/s10530-016-1056-y
  103. Mattucci, Federica; Oliveira, Rita; Lyons, Leslie A.; Alves, Paulo C.; Randi, Ettore. "European wildcat populations are subdivided into five main biogeographic groups: consequences of Pleistocene climate changes or recent anthropogenic fragmentation?". Ecology and Evolution 6 1 (2016): 3-22. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000369164000001&KeyUID=WOS:000369164000001.
    10.1002/ece3.1815
  104. Shafer, Aaron B. A.; Wolf, Jochen B. W.; Alves, Paulo C.; Bergstrom, Linnea; Colling, Guy; Dalen, Love; De Meester, Luc; et al. "Genomics in Conservation: Case Studies and Bridging the Gap between Data and Application Reply". Trends in Ecology & Evolution 31 2 (2016): 83-84. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000369462400002&KeyUID=WOS:000369462400002.
    10.1016/j.tree.2015.11.010
  105. Tarroso, Pedro; Carrion, Jose; Dorado-Valino, Miriam; Queiroz, Paula; Santos, Luisa; Valdeolmillos-Rodriguez, Ana; Alves, Paulo Celio; Brito, Jose Carlos; Cheddadi, Rachid. "Spatial climate dynamics in the Iberian Peninsula since 15 000 yr BP". Climate of the Past 12 5 (2016): 1137-1149. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000378320700003&KeyUID=WOS:000378320700003.
    10.5194/cp-12-1137-2016
  106. Lado, S.; Alves, P.C.; Brito, J.C.; Melo-Ferreira, J.. "Population history and taxonomy of African hares (genus Lepus) inferred from genetic variation". Mammalian Biology 81 (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-85058723061&partnerID=MN8TOARS.
    10.1016/j.mambio.2016.07.035
  107. Monterroso, Pedro; Garrote, German; Serronha, Ana; Santos, Emidio; Delibes-Mateos, Miguel; Abrantes, Joana; Perez de Ayala, Ramon; et al. "Disease-mediated bottom-up regulation: An emergent virus affects a keystone prey, and alters the dynamics of trophic webs". Scientific Reports 6 (2016): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000386457800001&KeyUID=WOS:000386457800001.
    10.1038/srep36072
  108. Monterroso, Pedro; Rebelo, Pedro; Alves, Paulo C.; Ferreras, Pablo. "Niche partitioning at the edge of the range: a multidimensional analysis with sympatric martens". Journal of Mammalogy 97 3 (2016): 928-939. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000378152600025&KeyUID=WOS:000378152600025.
    10.1093/jmammal/gyw016
  109. Ferreira, Sonia; Boudot, Jean-Pierre; El Haissoufi, Mohamed; Alves, Paulo Celio; Thompson, David J.; Brito, Jose Carlos; Watts, Phillip C.. "Genetic distinctiveness of the damselfly Coenagrion puella in North Africa: an overlooked and endangered taxon". Conservation Genetics 17 4 (2016): 985-991. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000379220500018&KeyUID=WOS:000379220500018.
    10.1007/s10592-016-0826-5
  110. Queiros, Joao; Vicente, Joaquin; Alves, Paulo C.; de la Fuente, Jose; Gortazar, Christian. "Tuberculosis, genetic diversity and fitness in the red deer, Cervus elaphus". Infection Genetics and Evolution 43 (2016): 203-212. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000379701100027&KeyUID=WOS:000379701100027.
    10.1016/j.meegid.2016.05.031
  111. Lopez, Vladimir; Villar, Margarita; Queiros, Joao; Vicente, Joaquin; Mateos-Hernandez, Lourdes; Diez-Delgado, Iratxe; Contreras, Marinela; et al. "Comparative Proteomics Identifies Host Immune System Proteins Affected by Infection with Mycobacterium bovis". Plos Neglected Tropical Diseases 10 3 (2016): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000373272500060&KeyUID=WOS:000373272500060.
    10.1371/journal.pntd.0004541
  112. Silva, Teresa Luisa; Godinho, Raquel; Castro, Diana; Abaigar, Teresa; Brito, Jose Carlos; Alves, Paulo Celio. "Genetic identification of endangered North African ungulates using noninvasive sampling". Molecular Ecology Resources 15 3 (2015): 652-661. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000352653700017&KeyUID=WOS:000352653700017.
    10.1111/1755-0998.12335
  113. Queiros, J.; Godinho, R.; Lopes, S.; Gortazar, C.; de la Fuente, J.; Alves, P. C.. "Effect of microsatellite selection on individual and population genetic inferences: an empirical study using cross-specific and species-specific amplifications". Molecular Ecology Resources 15 4 (2015): 747-760. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000356679800007&KeyUID=WOS:000356679800007.
    10.1111/1755-0998.12349
  114. Campos Ferreira, Catarina; Castro, Francisca; Piorno, Vicente; Catalan Barrio, Isabel; Delibes-Mateos, Miguel; Rouco, Carlos; Minguez, Luis E.; et al. "Biometrical analysis reveals major differences between the two subspecies of the European rabbit". Biological Journal of the Linnean Society 116 1 (2015): 106-116. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000359294700008&KeyUID=WOS:000359294700008.
    10.1111/bij.12556
  115. Carneiro, Miguel; Piorno, Vicente; Rubin, Carl-Johan; Alves, Joel M.; Ferrand, Nuno; Alves, Paulo C.; Andersson, Leif. "Candidate genes underlying heritable differences in reproductive seasonality between wild and domestic rabbits". Animal Genetics 46 4 (2015): 418-425. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000358641800010&KeyUID=WOS:000358641800010.
    10.1111/age.12299
  116. Piorno, V.; Villafuerte, R.; Branco, M.; Carneiro, M.; Ferrand, N.; Alves, P. C.. "Low persistence in nature of captive reared rabbits after restocking operations". European Journal of Wildlife Research 61 4 (2015): 591-599. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000358262200010&KeyUID=WOS:000358262200010.
    10.1007/s10344-015-0934-4
  117. Oliveira, R.; Randi, E.; Mattucci, F.; Kurushima, J. D.; Lyons, L. A.; Alves, P. C.. "Toward a genome-wide approach for detecting hybrids: informative SNPs to detect introgression between domestic cats and European wildcats (Felis silvestris)". Heredity 115 3 (2015): 195-205. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000359458400003&KeyUID=WOS:000359458400003.
    10.1038/hdy.2015.25
  118. Silva, Sofia Marques; Ferreira, Catarina; Pauperio, Joana; Silva, Rodolfo Miguel; Alves, Paulo Celio; Lemos, Armando; Silva, S.M.; et al. "Coccidiosis in European rabbit (Oryctolagus cuniculus algirus) populations in the Iberian Peninsula". Acta Parasitologica 60 2 (2015): 350-355. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000351855600024&KeyUID=WOS:000351855600024.
    10.1515/ap-2015-0049
  119. Lopes, Ana M.; Correia, Jorge; Abrantes, Joana; Melo, Pedro; Ramada, Margarida; Magalhaes, Maria J.; Alves, Paulo C.; Esteves, Pedro J.. "Is the New Variant RHDV Replacing Genogroup 1 in Portuguese Wild Rabbit Populations?". Viruses-Basel 7 1 (2015): 27-36. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000348401600002&KeyUID=WOS:000348401600002.
    10.3390/v7010027
  120. Shafer, Aaron B. A.; Wolf, Jochen B. W.; Alves, Paulo C.; Bergstrom, Linnea; Bruford, Michael W.; Brannstrom, Ioana; Colling, Guy; et al. "Genomics and the challenging translation into conservation practice". Trends in Ecology & Evolution 30 2 (2015): 78-87. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000349270700003&KeyUID=WOS:000349270700003.
    10.1016/j.tree.2014.11.009
  121. Grahn, Robert A; Alhaddad, Hasan; Alves, Paulo C; Randi, Ettore; Waly, Nashwa E; Lyons, Leslie A. "Feline mitochondrial DNA sampling for forensic analysis: When enough is enough!". Forensic science international. Genetics 16 (2015): 52-7. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=MEDLINE&KeyUT=MEDLINE:25531059&KeyUID=MEDLINE:25531059.
    10.1016/j.fsigen.2014.11.017
  122. Pauperio, Joana; Grosso, Jose Manuel; Martins, Filipa; Filipe, Ana Filipa; Penado, Andreia; Mata, Vanessa; Rebelo, Hugo; Alves, Paulo Celio; Beja, Pedro. "BARCODING.MED: building a high taxonomic resolution database for the Mediterranean basin". Genome 58 5 (2015): 265-265. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000360861200300&KeyUID=WOS:000360861200300.
  123. Acevedo, Pelayo; Melo-Ferreira, Jose; Farelo, Liliana; Beltran-Beck, Beatriz; Real, Raimundo; Campos, Rita; Alves, Paulo C.. "Range dynamics driven by Quaternary climate oscillations explain the distribution of introgressed mtDNA ofLepus timidus origin in hares from the Iberian Peninsula". Journal of Biogeography 42 9 (2015): 1727-1735. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000359376600013&KeyUID=WOS:000359376600013.
    10.1111/jbi.12556
  124. Mestre, Frederico; Pita, Ricardo; Pauperio, Joana; Martins, Filipa M. S.; Alves, Paulo Cello; Mira, Antonio; Beja, Pedro; et al. "Combining distribution modelling and non-invasive genetics to improve range shift forecasting". Ecological Modelling 297 (2015): 171-179. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000349425300018&KeyUID=WOS:000349425300018.
    10.1016/j.ecolmodel.2014.11.018
  125. Ferreira, Sonia; Martinez-Freiria, Fernando; Boudot, Jean-Pierre; El Haissoufi, Mohamed; Bennas, Nard; Alves, Paulo Celio; Watts, Phillip C.; Thompson, David J.; Brito, Jose Carlos. "Local extinctions and range contraction of the endangered Coenagrion mercuriale in North Africa". International Journal of Odonatology 18 2 (2015): 137-152. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000357092000002&KeyUID=WOS:000357092000002.
    10.1080/13887890.2015.1017846
  126. Vaz, A.S.; Marcos, B.; Goncalves, J.; Monteiro, A.; Alves, P.; Civantos, E.; Lucas, R.; et al. "Can we predict habitat quality from space? A multi-indicator assessment based on an automated knowledge-driven system". International Journal of Applied Earth Observation and Geoinformation 37 (2015): 106-113. http://www.scopus.com/inward/record.url?eid=2-s2.0-84945299027&partnerID=MN8TOARS.
    10.1016/j.jag.2014.10.014
  127. Queiros, J.; Vicente, J.; Boadella, M.; Gortázar, C.; Alves, P.C.. "The impact of management practices and past demographic history on the genetic diversity of red deer (Cervus elaphus): An assessment of population and individual fitness". Biological Journal of the Linnean Society 111 1 (2014): 209-223. http://www.scopus.com/inward/record.url?eid=2-s2.0-84890437866&partnerID=MN8TOARS.
    10.1111/bij.12183
  128. Froufe, E.; Ferreira, S.; Boudot, J.-P.; Alves, P.C.; Harris, D.J.. "Molecular phylogeny of the Western Palaearctic Cordulegaster taxa (Odonata: Anisoptera: Cordulegastridae)". Biological Journal of the Linnean Society 111 1 (2014): 49-57. http://www.scopus.com/inward/record.url?eid=2-s2.0-84890425574&partnerID=MN8TOARS.
    10.1111/bij.12190
  129. Melo-Ferreira, Jose; Vilela, Joana; Fonseca, Miguel M.; da Fonseca, Rute R.; Boursot, Pierre; Alves, Paulo C.. "The Elusive Nature of Adaptive Mitochondrial DNA Evolution of an Arctic Lineage Prone to Frequent Introgression". Genome Biology and Evolution 6 4 (2014): 886-896.
    10.1093/gbe/evu059
  130. Ferreira, S.; Velo-Antón, G.; Brochard, C.; Vieira, C.; Alves, P.C.; Thompson, D.J.; Watts, P.C.; Brito, J.C.. "A Critically Endangered new dragonfly species from Morocco: Onychogomphus boudoti sp. nov. (Odonata: Gomphidae)". Zootaxa 3856 3 (2014): 349-365. http://www.scopus.com/inward/record.url?eid=2-s2.0-84906686757&partnerID=MN8TOARS.
    10.11646/zootaxa.3856.3.3
  131. Monterroso, Pedro; Alves, Paulo Celio; Ferreras, Pablo. "Plasticity in circadian activity patterns of mesocarnivores in Southwestern Europe: implications for species coexistence". Behavioral Ecology and Sociobiology 68 9 (2014): 1403-1417.
    10.1007/s00265-014-1748-1
  132. Seixas, Fernando A.; Juste, Javier; Campos, Paula F.; Carneiro, Miguel; Ferrand, Nuno; Alves, Paulo C.; Melo-Ferreira, Jose. "Colonization history of Mallorca Island by the European rabbit, Oryctolagus cuniculus, and the Iberian hare, Lepus granatensis (Lagomorpha: Leporidae)". Biological Journal of the Linnean Society 111 4 (2014): 748-760. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000333599100004&KeyUID=WOS:000333599100004.
    10.1111/bij.12248
  133. Cheng, Ellen; Hodges, Karen E.; Melo-Ferreira, Jose; Alves, Paulo C.; Mills, L. Scott. "Conservation implications of the evolutionary history and genetic diversity hotspots of the snowshoe hare". Molecular Ecology 23 12 (2014): 2929-2942.
    10.1111/mec.12790
  134. Monterroso, Pedro; Rich, Lindsey N.; Serronha, Ana; Ferreras, Pablo; Alves, Paulo Celio. "Efficiency of hair snares and camera traps to survey mesocarnivore populations". European Journal of Wildlife Research 60 2 (2014): 279-289.
    10.1007/s10344-013-0780-1
  135. Acevedo, Pelayo; Melo-Ferreira, Jose; Real, Raimundo; Alves, Paulo C.. "Evidence for niche similarities in the allopatric sister species Lepus castroviejoi and Lepus corsicanus". Journal of Biogeography 41 5 (2014): 977-986.
    10.1111/jbi.12270
  136. Ferreira, Catarina; Villafuerte, Rafael; Villar, Nacho; Castro, Francisca; Ferreras, Pablo; Rouco, Carlos; Alves, Paulo C.; Arias de Reyna, Luis; Redpath, Steve. "Experimental study on the effect of cover and vaccination on the survival of juvenile European rabbits". Population Ecology 56 1 (2014): 195-202.
    10.1007/s10144-013-0403-4
  137. Melo-Ferreira, J.; Farelo, L.; Freitas, H.; Suchentrunk, F.; Boursot, P.; Alves, P. C.. "Home-loving boreal hare mitochondria survived several invasions in Iberia: the relative roles of recurrent hybridisation and allele surfing". Heredity 112 3 (2014): 265-273.
    10.1038/hdy.2013.102
  138. Vilaca, Sibelle T.; Biosa, Daniela; Zachos, Frank; Iacolina, Laura; Kirschning, Julia; Alves, Paulo C.; Paule, Ladislav; et al. "Mitochondrial phylogeography of the European wild boar: the effect of climate on genetic diversity and spatial lineage sorting across Europe". Journal of Biogeography 41 5 (2014): 987-998.
    10.1111/jbi.12268
  139. Melo-Ferreira, Jose; Seixas, Fernando A; Cheng, Ellen; Mills, L Scott; Alves, Paulo C. "The hidden history of the snowshoe hare, Lepus americanus: extensive mitochondrial DNA introgression inferred from multilocus genetic variation.". Molecular ecology 23 18 (2014): 4617-30.
    10.1111/mec.12886
  140. Pinheiro, Ana; Woof, Jenny M; Almeida, Tereza; Abrantes, Joana; Alves, Paulo C; Gortazar, Christian; Esteves, Pedro J. "Leporid immunoglobulin G shows evidence of strong selective pressure on the hinge and CH3 domains.". Open biology 4 9 (2014):
    10.1098/rsob.140088
  141. Lopes, Ana M.; Marques, Sara; Silva, Eliane; Magalhaes, Maria J.; Pinheiro, Ana; Alves, Paulo C.; Le Pendu, Jacques; et al. "Detection of RHDV strains in the Iberian hare (Lepus granatensis): earliest evidence of rabbit lagovirus cross-species infection". Veterinary Research 45 (2014): http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000342649300001&KeyUID=WOS:000342649300001.
    10.1186/s13567-014-0094-7
  142. Pinheiro, Ana; Melo-Ferreira, Jose; Abrantes, Joana; Martinelli, Nicola; Lavazza, Antonio; Alves, Paulo C.; Gortazar, Christian; Esteves, Pedro J.. "Sequencing of Sylvilagus VDJ genes reveals a new VHa allelic lineage and shows that ancient VH lineages were retained differently in leporids". Immunogenetics 66 12 (2014): 719-726. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000345007900005&KeyUID=WOS:000345007900005.
    10.1007/s00251-014-0807-0
  143. Boratynski, Z.; Melo-Ferreira, J.; Alves, P. C.; Berto, S.; Koskela, E.; Pentikainen, O. T.; Tarroso, P.; Ylilauri, M.; Mappes, T.. "Molecular and ecological signs of mitochondrial adaptation: consequences for introgression?". Heredity 113 4 (2014): 277-286. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000342564000001&KeyUID=WOS:000342564000001.
    10.1038/hdy.2014.28
  144. Barbosa, S.; Pauperio, J.; Searle, J.B.; Alves, P.C.. "Genetic identification of Iberian rodent species using both mitochondrial and nuclear loci: Application to noninvasive sampling". Molecular Ecology Resources 13 1 (2013): 43-56. http://www.scopus.com/inward/record.url?eid=2-s2.0-84870945637&partnerID=MN8TOARS.
    10.1111/1755-0998.12024
  145. Gayral, P.; Melo-Ferreira, J.; Glémin, S.; Bierne, N.; Carneiro, M.; Nabholz, B.; Lourenco, J.M.; et al. "Reference-Free Population Genomics from Next-Generation Transcriptome Data and the Vertebrate-Invertebrate Gap". PLoS Genetics 9 4 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84876855375&partnerID=MN8TOARS.
    10.1371/journal.pgen.1003457
  146. Monterroso, P.; Castro, D.; Silva, T.L.; Ferreras, P.; Godinho, R.; Alves, P.C.. "Factors affecting the (in)accuracy of mammalian mesocarnivore scat identification in South-western Europe". Journal of Zoology 289 4 (2013): 243-250. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875619259&partnerID=MN8TOARS.
    10.1111/jzo.12000
  147. Monterroso, P.; Sillero, N.; Rosalino, L.M.; Loureiro, F.; Alves, P.C.. "Estimating home-range size: When to include a third dimension?". Ecology and Evolution 3 7 (2013): 2285-2295. http://www.scopus.com/inward/record.url?eid=2-s2.0-84886299287&partnerID=MN8TOARS.
    10.1002/ece3.590
  148. Mattucci, F.; Oliveira, R.; Bizzarri, L.; Vercillo, F.; Anile, S.; Ragni, B.; Lapini, L.; et al. "Genetic structure of wildcat (Felis silvestris) populations in Italy". Ecology and Evolution 3 8 (2013): 2443-2458. http://www.scopus.com/inward/record.url?eid=2-s2.0-84887938658&partnerID=MN8TOARS.
    10.1002/ece3.569
  149. Abrantes, J.; Lopes, A.M.; Dalton, K.P.; Melo, P.; Correia, J.J.; Ramada, M.; Alves, P.C.; Parra, F.; Esteves, P.J.. "New variant of rabbit hemorrhagic disease virus, Portugal, 2012-2013". Emerging Infectious Diseases 19 11 (2013): 1900-1902. http://www.scopus.com/inward/record.url?eid=2-s2.0-84887006360&partnerID=MN8TOARS.
    10.3201/eid1911.130908
  150. Pinheiro, A.; De Mera, I.G.F.; Alves, P.C.; Gortázar, C.; De La Fuente, J.; Esteves, P.J.. "Sequencing of modern Lepus VDJ genes shows that the usage of VHn genes has been retained in both Oryctolagus and Lepus that diverged 12 million years ago". Immunogenetics 65 11 (2013): 777-784. http://www.scopus.com/inward/record.url?eid=2-s2.0-84886789456&partnerID=MN8TOARS.
    10.1007/s00251-013-0728-3
  151. Monterroso, Pedro; Alves, Paulo Celio; Ferreras, Pablo. "Catch Me If You Can: Diel Activity Patterns of Mammalian Prey and Predators". Ethology 119 12 (2013): 1044-1056.
    10.1111/eth.12156
  152. Fordham, D.A.; Akçakaya, H.R.; Brook, B.W.; Rodríguez, A.; Alves, P.C.; Civantos, E.; Triviño, M.; et al. "Adapted conservation measures are required to save the Iberian lynx in a changing climate". Nature Climate Change 3 10 (2013): 899-903. http://www.scopus.com/inward/record.url?eid=2-s2.0-84886367844&partnerID=MN8TOARS.
    10.1038/nclimate1954
  153. Pinheiro, A.; Alves, P. C.; Gortazar, C.; Esteves, P. J.. "IGHE genetic diversity in european rabbit and hares (leporidae)". Immunology (2013): https://publons.com/wos-op/publon/4727323/.
  154. Paupério, J.; Herman, J.S.; Melo-Ferreira, J.; Jaarola, M.; Alves, P.C.; Searle, J.B.. "Cryptic speciation in the field vole: A multilocus approach confirms three highly divergent lineages in Eurasia". Molecular Ecology 21 24 (2012): 6015-6032. http://www.scopus.com/inward/record.url?eid=2-s2.0-84870945760&partnerID=MN8TOARS.
    10.1111/mec.12024
  155. Acevedo, P.; Melo-Ferreira, J.; Real, R.; Alves, P.C.. "Past, Present and Future Distributions of an Iberian Endemic, Lepus granatensis: Ecological and Evolutionary Clues from Species Distribution Models". PLoS ONE 7 12 (2012): http://www.scopus.com/inward/record.url?eid=2-s2.0-84871272420&partnerID=MN8TOARS.
    10.1371/journal.pone.0051529
  156. Acevedo, P.; Jiménez-Valverde, A.; Melo-Ferreira, J.; Real, R.; Alves, P.C.. "Parapatric species and the implications for climate change studies: A case study on hares in Europe". Global Change Biology 18 5 (2012): 1509-1519. http://www.scopus.com/inward/record.url?eid=2-s2.0-84859491632&partnerID=MN8TOARS.
    10.1111/j.1365-2486.2012.02655.x
  157. Giménez, M.D.; Paupério, J.; Alves, P.C.; Searle, J.B.. "Giant sex chromosomes retained within the Portuguese lineage of the field vole (Microtus agrestis)". Acta Theriologica 57 4 (2012): 377-382. http://www.scopus.com/inward/record.url?eid=2-s2.0-84866443492&partnerID=MN8TOARS.
    10.1007/s13364-012-0087-8
  158. Melo-Ferreira, J.; Boursot, P.; Carneiro, M.; Esteves, P.J.; Farelo, L.; Alves, P.C.. "Recurrent introgression of mitochondrial DNA among hares (lepus spp.) revealed by species-tree inference and coalescent simulations". Systematic Biology 61 3 (2012): 367-381. http://www.scopus.com/inward/record.url?eid=2-s2.0-84860153849&partnerID=MN8TOARS.
    10.1093/sysbio/syr114
  159. Pinheiro, A.; Alves, P. C.; Gortazar, C.; Esteves, P. J.. "Evaluation of genetic diversity of IGHG in 11 Lepus species". Immunology (2012): https://publons.com/wos-op/publon/4727269/.
  160. Pietri, C.; Alves, P.C.; Melo-Ferreira, J.. "Hares in Corsica: High prevalence of Lepus corsicanus and hybridization with introduced L. europaeus and L. granatensis". European Journal of Wildlife Research 57 2 (2011): 313-321. http://www.scopus.com/inward/record.url?eid=2-s2.0-79952809938&partnerID=MN8TOARS.
    10.1007/s10344-010-0430-9
  161. Melo-Ferreira, J.; Alves, P.C.; Rocha, J.; Ferrand, N.; Boursot, P.. "Interspecific x-chromosome and mitochondrial dna introgression in the iberian hare: Selection or allele surfing?". Evolution 65 7 (2011): 1956-1968. http://www.scopus.com/inward/record.url?eid=2-s2.0-79959975893&partnerID=MN8TOARS.
    10.1111/j.1558-5646.2011.01261.x
  162. Monterroso, P.; Alves, P.C.; Ferreras, P.. "Evaluation of attractants for non-invasive studies of Iberian carnivore communities". Wildlife Research 38 5 (2011): 446-454. http://www.scopus.com/inward/record.url?eid=2-s2.0-80054109561&partnerID=MN8TOARS.
    10.1071/WR11060
  163. Sousa, P.; Froufe, E.; James Harris, D.; Alves, P.C.; van der Meijden, A.; Sousa, Pedro; Froufe, Elsa; Alves, Paulo Celio; van der Meijden, Arie. "Genetic diversity of maghrebian Hottentotta (Scorpiones: Buthidae) scorpions based on CO1: New insights on the genus phylogeny and distribution". African Invertebrates 52 1 (2011): 135-143. http://www.scopus.com/inward/record.url?eid=2-s2.0-79960733023&partnerID=MN8TOARS.
    10.5733/AFIN.052.0106
  164. Pinheiro, A.; Lanning, D.; Alves, P.C.; Mage, R.G.; Knight, K.L.; Van Der Loo, W.; Esteves, P.J.. "Molecular bases of genetic diversity and evolution of the immunoglobulin heavy chain variable region (IGHV) gene locus in leporids". Immunogenetics 63 7 (2011): 397-408. http://www.scopus.com/inward/record.url?eid=2-s2.0-79959716257&partnerID=MN8TOARS.
    10.1007/s00251-011-0533-9
  165. Boratynski, Z.; Alves, P.; Berto, S.; Koskela, E.; Mappes, T.; Melo-Ferreira, J.. "Introgression of mitochondrial DNA among Myodes voles: Consequences for energetics?". BMC Evolutionary Biology 11 1 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-84855948088&partnerID=MN8TOARS.
    10.1186/1471-2148-11-355
  166. Ferreira, C.; Paupério, J.; Alves, P.C.. "The usefulness of field data and hunting statistics in the assessment of wild rabbit (Oryctolagus cuniculus) conservation status in Portugal". Wildlife Research 37 3 (2010): 223-229. http://www.scopus.com/inward/record.url?eid=2-s2.0-77952615953&partnerID=MN8TOARS.
    10.1071/WR09137
  167. Célio Alves, P.; Pinheiro, I.; Godinho, R.; Vicente, J.; Gortázar, C.; Scandura, M.. "Genetic diversity of wild boar populations and domestic pig breeds (Sus scrofa) in South-western Europe". Biological Journal of the Linnean Society 101 4 (2010): 797-822. http://www.scopus.com/inward/record.url?eid=2-s2.0-78649433120&partnerID=MN8TOARS.
    10.1111/j.1095-8312.2010.01530.x
  168. Oliveira, R.; Castro, D.; Godinho, R.; Luikart, G.; Alves, P.C.. "Species identification using a small nuclear gene fragment: Application to sympatric wild carnivores from South-western Europe". Conservation Genetics 11 3 (2010): 1023-1032. http://www.scopus.com/inward/record.url?eid=2-s2.0-77952882943&partnerID=MN8TOARS.
    10.1007/s10592-009-9947-4
  169. Sousa, P.; Froufe, E.; Alves, P.C.; Harris, D.J.. "Genetic diversity within scorpions of the genus Buthus from the Iberian Peninsula: Mitochondrial DNA sequence data indicate additional distinct cryptic lineages". Journal of Arachnology 38 2 (2010): 206-211. http://www.scopus.com/inward/record.url?eid=2-s2.0-77956676783&partnerID=MN8TOARS.
    10.1636/H08-98.1
  170. Ferreira, C.; Ramírez, E.; Castro, F.; Ferreras, P.; Alves, P.C.; Redpath, S.; Villafuerte, R.. "Field experimental vaccination campaigns against myxomatosis and their effectiveness in the wild". Vaccine 27 50 (2009): 6998-7002. http://www.scopus.com/inward/record.url?eid=2-s2.0-70350567204&partnerID=MN8TOARS.
    10.1016/j.vaccine.2009.09.075
  171. Monterroso, P.; Brito, J.C.; Ferreras, P.; Alves, P.C.. "Spatial ecology of the European wildcat in a Mediterranean ecosystem: Dealing with small radio-tracking datasets in species conservation". Journal of Zoology 279 1 (2009): 27-35. http://www.scopus.com/inward/record.url?eid=2-s2.0-69249133854&partnerID=MN8TOARS.
    10.1111/j.1469-7998.2009.00585.x
  172. Beja-Pereira, A.; Oliveira, R.; Alves, P.C.; Schwartz, M.K.; Luikart, G.. "Advancing ecological understandings through technological transformations in noninvasive genetics". Molecular Ecology Resources 9 5 (2009): 1279-1301. http://www.scopus.com/inward/record.url?eid=2-s2.0-68949112082&partnerID=MN8TOARS.
    10.1111/j.1755-0998.2009.02699.x
  173. Ferreira, C.; Alves, P.C.. "Influence of habitat management on the abundance and diet of wild rabbit (Oryctolagus cuniculus algirus) populations in mediterranean ecosystems". European Journal of Wildlife Research 55 5 (2009): 487-496. http://www.scopus.com/inward/record.url?eid=2-s2.0-77957564246&partnerID=MN8TOARS.
    10.1007/s10344-009-0257-4
  174. Melo-Ferreira, J.; Alves, P.C.; Freitas, H.; Ferrand, N.; Boursot, P.. "The genomic legacy from the extinct Lepus timidus to the three hare species of Iberia: Contrast between mtDNA, sex chromosomes and autosomes". Molecular Ecology 18 12 (2009): 2643-2658. http://www.scopus.com/inward/record.url?eid=2-s2.0-66749101639&partnerID=MN8TOARS.
    10.1111/j.1365-294X.2009.04221.x
  175. Stamatis, C.; Suchentrunk, F.; Moutou, K.A.; Giacometti, M.; Haerer, G.; Djan, M.; Vapa, L.; et al. "Phylogeography of the brown hare (Lepus europaeus) in Europe: A legacy of south-eastern Mediterranean refugia?". Journal of Biogeography 36 3 (2009): 515-528. http://www.scopus.com/inward/record.url?eid=2-s2.0-60349114162&partnerID=MN8TOARS.
    10.1111/j.1365-2699.2008.02013.x
  176. Muller, A.; Freitas, J.; Silva, E.; Le Gall-Reculé, G.; Zwingelstein, F.; Abrantes, J.; Esteves, P.J.; et al. "Evolution of rabbit haemorrhagic disease virus (RHDV) in the European rabbit (Oryctolagus cuniculus) from the Iberian Peninsula". Veterinary Microbiology 135 3-4 (2009): 368-373. http://www.scopus.com/inward/record.url?eid=2-s2.0-62149127401&partnerID=MN8TOARS.
    10.1016/j.vetmic.2008.09.057
  177. Ben Slimen, H.; Suchentrunk, F.; Stamatis, C.; Mamuris, Z.; Sert, H.; Alves, P.C.; Kryger, U.; Shahin, A.B.; Ben Ammar Elgaaied, A.. "Population genetics of cape and brown hares (Lepus capensis and L. europaeus): A test of Petter's hypothesis of conspecificity". Biochemical Systematics and Ecology 36 1 (2008): 22-39. http://www.scopus.com/inward/record.url?eid=2-s2.0-36249016771&partnerID=MN8TOARS.
    10.1016/j.bse.2007.06.014
  178. Alves, P.C.; Melo-Ferreira, J.; Branco, M.; Suchentrunk, F.; Ferrand, N.; Harris, D.J.. "Evidence for genetic similarity of two allopatric European hares (Lepus corsicanus and L. castroviejoi) inferred from nuclear DNA sequences". Molecular Phylogenetics and Evolution 46 3 (2008): 1191-1197. http://www.scopus.com/inward/record.url?eid=2-s2.0-40849087920&partnerID=MN8TOARS.
    10.1016/j.ympev.2007.11.010
  179. Oliveira, R.; Godinho, R.; Randi, E.; Alves, P.C.. "Hybridization versus conservation: Are domestic cats threatening the genetic integrity of wildcats (Felis silvestris silvestris) in Iberian Peninsula?". Philosophical Transactions of the Royal Society B: Biological Sciences 363 1505 (2008): 2953-2961. http://www.scopus.com/inward/record.url?eid=2-s2.0-48749128008&partnerID=MN8TOARS.
    10.1098/rstb.2008.0052
  180. Oliveira, R.; Godinho, R.; Randi, E.; Ferrand, N.; Alves, P.C.. "Molecular analysis of hybridisation between wild and domestic cats (Felis silvestris) in Portugal: Implications for conservation". Conservation Genetics 9 1 (2008): 1-11. http://www.scopus.com/inward/record.url?eid=2-s2.0-38049037891&partnerID=MN8TOARS.
    10.1007/s10592-007-9297-z
  181. Antoniou, A.; Kotoulas, G.; Magoulas, A.; Alves, P.C.. "Evidence of autumn reproduction in female European hares (Lepus europaeus) from southern Europe". European Journal of Wildlife Research 54 4 (2008): 581-587. http://www.scopus.com/inward/record.url?eid=2-s2.0-52449091350&partnerID=MN8TOARS.
    10.1007/s10344-008-0182-y
  182. Froufe, E.; Sousa, P.; Alves, P.C.; Harris, D.J.. "Genetic diversity within Scorpio maurus (Scorpiones: Scorpionidae) from morocco: Preliminary evidence based on CO1 mitochondrial DNA sequences". Biologia 63 6 (2008): 1157-1160. http://www.scopus.com/inward/record.url?eid=2-s2.0-57349194794&partnerID=MN8TOARS.
    10.2478/s11756-008-0176-y
  183. Alves, P.C.; Melo-Ferreira, J.; Freitas, H.; Boursot, P.. "Review. The ubiquitous mountain hare mitochondria: Multiple introgressive hybridization in hares, genus Lepus". Philosophical Transactions of the Royal Society B: Biological Sciences 363 1505 (2008): 2831-2839. http://www.scopus.com/inward/record.url?eid=2-s2.0-48749115716&partnerID=MN8TOARS.
    10.1098/rstb.2008.0053
  184. Paupério, J.; Alves, P.C.. "Diet of the Iberian hare (Lepus granatensis) in a mountain ecosystem". European Journal of Wildlife Research 54 4 (2008): 571-579. http://www.scopus.com/inward/record.url?eid=2-s2.0-52449091348&partnerID=MN8TOARS.
    10.1007/s10344-008-0181-z
  185. Lomba, A.; Alves, P.; Honrado, J.. "Endemic sand dune vegetation of the northwest Iberian peninsula: Diversity, dynamics, and significance for bioindication and monitoring of coastal landscapes". Journal of Coastal Research 24 2 SUPPL. B (2008): 113-121. http://www.scopus.com/inward/record.url?eid=2-s2.0-42149187661&partnerID=MN8TOARS.
    10.2112/05-0610.1
  186. Simões, B.F.; Rebelo, H.; Lopes, R.J.; Alves, P.C.; Harris, D.J.. "Patterns of genetic diversity within and between Myotis d. daubentonii and M. d. nathalinae derived from cytochrome b mtDNA sequence data". Acta Chiropterologica 9 2 (2007): 379-389. http://www.scopus.com/inward/record.url?eid=2-s2.0-39149135580&partnerID=MN8TOARS.
    10.3161/1733-5329(2007)9[379:POGDWA]2.0.CO;2
  187. Melo-Ferreira, J.; Boursot, P.; Randi, E.; Kryukov, A.; Suchentrunk, F.; Ferrand, N.; Alves, P.C.. "The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: Expansion and retreat with hybridization in the Iberian Peninsula". Molecular Ecology 16 3 (2007): 605-618. http://www.scopus.com/inward/record.url?eid=2-s2.0-33846560358&partnerID=MN8TOARS.
    10.1111/j.1365-294X.2006.03166.x
  188. Alves, P.C.; Harris, D.J.; Melo-Ferreira, J.; Branco, M.; Ferrand, N.; Suchentrunk, F.; Boursot, P.. "Hares on thin ice: Introgression of mitochondrial DNA in hares and its implications for recent phylogenetic analyses". Molecular Phylogenetics and Evolution 40 2 (2006): 640-641. http://www.scopus.com/inward/record.url?eid=2-s2.0-33745817851&partnerID=MN8TOARS.
    10.1016/j.ympev.2006.02.016
  189. Ben Slimen, H.; Suchentrunk, F.; Memmi, A.; Sert, H.; Kryger, U.; Alves, P.C.; Ben Ammar Elgaaied, A.. "Evolutionary relationships among hares from North Africa (Lepus sp. or Lepus spp.), cape hares (L. capensis) from South Africa, and brown hares (L. europaeus), as inferred from mtDNA PCR-RFLP and allozyme data". Journal of Zoological Systematics and Evolutionary Research 44 1 (2006): 88-99. http://www.scopus.com/inward/record.url?eid=2-s2.0-33645294052&partnerID=MN8TOARS.
    10.1111/j.1439-0469.2005.00345.x
  190. Melo-Ferreira, J.; Boursot, P.; Suchentrunk, F.; Ferrand, N.; Alves, P.C.. "Invasion from the cold past: Extensive introgression of mountain hare (Lepus timidus) mitochondrial DNA into three other hare species in northern Iberia". Molecular Ecology 14 8 (2005): 2459-2464. http://www.scopus.com/inward/record.url?eid=2-s2.0-21244445043&partnerID=MN8TOARS.
    10.1111/j.1365-294X.2005.02599.x
  191. Randi, E.; Alves, P.C.; Carranza, J.; Milosevic-Zlatanovi, S.; Sfougaris, A.; Mucci, N.. "Phylogeography of roe deer (Capreolus capreolus) populations: The effects of historical genetic subdivisions and recent nonequilibrium dynamics". Molecular Ecology 13 10 (2004): 3071-3083. http://www.scopus.com/inward/record.url?eid=2-s2.0-4644324872&partnerID=MN8TOARS.
    10.1111/j.1365-294X.2004.02279.x
  192. Alves, P.C.; Ferrand, N.; Suchentrunk, F.; Harris, D.J.. "Ancient introgression of Lepus timidus mtDNA into L. granatensis and L. europaeus in the Iberian Peninsula". Molecular Phylogenetics and Evolution 27 1 (2003): 70-80. http://www.scopus.com/inward/record.url?eid=2-s2.0-0037387722&partnerID=MN8TOARS.
    10.1016/S1055-7903(02)00417-7
  193. Alves, P.C.; Rocha, A.. "Environmental factors have little influence on the reproductive activity of the Iberian hare (Lepus granatensis)". Wildlife Research 30 6 (2003): 639-647. http://www.scopus.com/inward/record.url?eid=2-s2.0-0842328897&partnerID=MN8TOARS.
    10.1071/WR02035
  194. Gonçalves, H.; Alves, P.C.; Rocha, A.. "Seasonal variation in the reproductive activity of the wild rabbit (Oryctolagus cuniculus algirus) in a Mediterranean ecosystem". Wildlife Research 29 2 (2002): 165-173. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036295112&partnerID=MN8TOARS.
    10.1071/WR00048
  195. Esteves, P.J.; Alves, P.C.; Ferrand, N.; Van Der Loo, W.. "Hotspot variation at the CH2-CH3 interface of leporid IgG antibodies (Oryctolagus, Sylvilagus and Lepus)". European Journal of Immunogenetics 29 6 (2002): 529-535. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036434588&partnerID=MN8TOARS.
    10.1046/j.1365-2370.2002.00355.x
  196. Esteves, P.J.; Alves, P.C.; Ferrand, N.; Van Der Loo, W.. "Restriction fragment alleles of the rabbit IGHG genes with reference to the rabbit IGHGCH2 or e locus polymorphism". Animal Genetics 33 4 (2002): 309-311. http://www.scopus.com/inward/record.url?eid=2-s2.0-0035988983&partnerID=MN8TOARS.
    10.1046/j.1365-2052.2002.00877.x
  197. Alves, P.C.; Gonçalves, H.; Santos, M.; Rocha, A.. "Reproductive biology of the Iberian hare, Lepus granatensis, in Portugal". Mammalian Biology 67 6 (2002): 358-371. http://www.scopus.com/inward/record.url?eid=2-s2.0-0036925328&partnerID=MN8TOARS.
    10.1078/1616-5047-00051
  198. Alves, P.C.; Ferrand, N.; Suchentrunk, F.; ALVES, PC; FERRAND, N; SUCHENTRUNK, F. "Developmental stability and protein heterozygosity in a local population of Iberian hares (Lepus granatensis)". Zeitschrift fur Saugetierkunde 66 4 (2001): 238-250. http://www.scopus.com/inward/record.url?eid=2-s2.0-28344436107&partnerID=MN8TOARS.
  199. Alves, P.C.; Branco, M.; Matias, O.; Ferrand, N.; ALVES, PC; BRANCO, M; MATIAS, O; et al.. "New genetic variation in European hares, Lepus granatensis and L. europaeus". Biochemical Genetics 38 3-4 (2000): 87-96. http://www.scopus.com/inward/record.url?eid=2-s2.0-0033752869&partnerID=MN8TOARS.
    10.1023/A:1002715913943
  200. Alves, P.C.; Ferrand, N.. "Genetic variability in Portuguese populations of the Iberian hare, Lepus granatensis". Folia Zoologica 48 SUPPL. 1 (1999): 3-10. http://www.scopus.com/inward/record.url?eid=2-s2.0-0033498933&partnerID=MN8TOARS.
Magazine article
  1. Duarte, Margarida; Santos, F. A.; Carvalho, Carina; Fagulha, T.; Monteiro, J.; Esteves, Pedro; Abrantes, Joana; et al. "20 perguntas & respostas sobre mixomatose em lebre-ibérica", Caça e Cães de Caça, 2020
  2. Duarte, Margarida; Carvalho, Carina; Abade dos Santos, F.; Fagulha, T.; Albuquerque, T.; Gomes, J.; Waap, Helga; et al. "Objetivos e estratégia do projeto +Coelho: primeiro ano de implementação", Vida Rural, 2019
Preprint
  1. Peter B. Pearman; Olivier Broennimann; Tamer Albayrak; Paulo Célio Alves; Laura D. Bertola; Aleksandra Biedrzycka; Elena Buzan; et al. "Conserving genetic diversity during climate change: Niche marginality and discrepant monitoring capacity in Europe". 2023. https://doi.org/10.1101/2023.03.24.533448.
    10.1101/2023.03.24.533448
Report
  1. Fontes, João; Moreira, Mafalda; ALVES, Paulo C; Gonçalves, David. 2018. Relatório Intercalar do Projeto - Estudo piloto para avaliação do impacto do coelho-bravo no ecossistema¿: Estado de desenvolvimento do estudo piloto e atualização da análise dos dados da monitorização da abundância de coelho-bravo (recolhidos nos censos noturnos) (" Interim Report of the Project - Pilot study to assess the impact of wild rabbit on the ecosystem").

Other

Other output
  1. The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics.. ABSTRACT: A global genome database of all of Earth’s species diversity could be a treasure trove of scientific discoveries. However, regardless of the major advances in genome sequencing technologies, only a tiny fraction of species have genomic information available. To contribute to a more complete planetary genomic database, scientists and institutions across the world have united under the Ear. 2023. Mc Cartney, Ann M.; Formenti, Giulio; Mouton, Alice; De Panis, Diego; Marins, Luísa S; Leitão, Henrique; Diedericks, Genevieve; et al. http://hdl.handle.net/10400.3/6875.
    10.1101/2023.09.25.559365
  2. The evolutionary pathways for local adaptation in mountain hares. Molecular Ecology. 2021. Iwona Giska; João Pimenta; Liliana Farelo; Pierre Boursot; Klaus Hackländer; Hannes Jenny; Neil Reid; et al. https://doi.org/10.1101/2021.09.16.460230.
    10.1101/2021.09.16.460230
  3. Crowdfunded whole-genome sequencing of the celebrity cat Lil BUB identifies causal mutations for her osteopetrosis and polydactyly. 2019. Bridavsky, M.; Kuhl, H.; Woodruff, A.; Kornak, U.; Timmermann, B.; Mages, N.; Lupiáñez, D.G.; et al. http://www.scopus.com/inward/record.url?eid=2-s2.0-85095653956&partnerID=MN8TOARS.
    10.1101/556761
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2019 Conservation genetics: bridging conservation biology and genetics XXIII Congreso SMBC (Sociedad Mesoamericana para la Biología y la Conservación)
Sociedad Mesoamericana para la Biología y la Conservación (Antiqua, Guatemala)
2019 Genetic patrimony of game species Game and Wildlife Summit
INIAV (Lisbon)
2019 Red Deer in Iberia: insights from molecular ecological studies SABIO, Annual Meeting
IREC- CSIC, University of Castilla la Mancha (Ciudad Real, Spain)
2018 The new conservation genetics era: bridging conservation biology gap with genomics. BeGenDiv, Genomics Symposium 2018
University of Berlim (Berlim, Germany)
2017 Conservation genetics: How can we use genetics to conserve species XXI Mesoamerican Society for Biology and Conservation Congress.
Society for Biology and Conservation Congress. (San Jose, Costa Rica)
2017 Research at the University of Porto in non-invasive sampling: assessing species identification, distribution and population structure Invited Seminar
University of Kathmandu (Kathmandu, Nepal)
2016 Perspectivas de entrenamiento en Biología y Genética de la Conservación en la Universidad de Porto, Portugal IX Encuentro Nacional sobre Biologia de la Conservación. Genética da Conservación, acciones futuras en Costa Rica
Mesoamerican Society for Biology and Conservation Congress (Heredia, Costa Rica)
2016 Poblaciones de conejo silvestre en las futuras áreas de reintrodución V Seminario Internacional de Conservación del Lince Ibérico
University of Seville (Seville, Spain)
2016 Genetica, sistema inmunitario y enfermedades de la liebre iberica Jornadas sobre la liebre iberica: presente y futuro
IRIAF, Centro de Investigacion Apícola y Agroambiental de Marchamalo (Guadalajara)
2015 Conservation Genetics in the Genomic Era Guest lecture at College of Natural Resources.
North Carolina State University (Raleigh, United States)
2015 Lagomorphs in Europe: the European rabbit as a conservation paradox Guest lecture at Mammal course
Cornell University (Ithaca, United States)
2015 Non-invasive genetic tools for mammal conservation. Guest lecture at Mammal course
Cornell University (Ithaca, United States)
2015 Reticulate evolution in Lagomorphs: conservation and management implications. Workshop on Lagomorph Biology, European Congress of Mammalogy ECM7
University of Stockholm (Stockholm, Sweden)
2015 Wild rabbit management issues in Iberia Why wildlife, Workshop. The Global Challenges University Alliance (CGUA)
University of Uppsala (Uppsala, Sweden)
2014 Hybridization, adaptation and historical demography: Hares, Lepus spp, as an example. Natural History Museum of Berlin
(Berlim, Germany)
2014 The wild rabbit (Oryctolagus cuniculus): current status, genetic structure and population management LaGomiCs (Lagomorph Genomics Consortium) meeting. COST Action “A Collaborative European Network on Rabbit Genome Biology – RGB-Net
(Bologna, Italy)
2014 Non-invasive genetic sampling to monitor biodiversity Conservation Biology Research Symposium
IUWICE (Bhumtam, Bhutan)
2014 Non-invasive genetic sampling: assessing species identification, distribution and population structure Guest Lecture
University of Kathmandu
2014 Jackrabbits and hares: an intriguing case of reticulate evolution Guest Seminar
University of Georgia (United States)
2013 An overview on Lagomorph biology. First Lagomorph Genomics Meeting. RGB-Net (COST Action “A Collaborative European Network on Rabbit Genome Biology – RGB-Net”) and World Lagomorph Society
(Bologna, Italy)
2013 From elephants to voles: examples of better conservation based on non-invasive genetic sampling Guest letter at Mammalogy class
Cornell University (Ithaca, United States)
2013 Reticulate evolution and recurrent mitochondrial DNA introgression in hares and jackrabbits (Lepus spp).
Evo-Group Seminar, Cornell University (Ithaca, United States)
2012 Métodos não invasivos: identificação molecular de espécies e detecção de hibridação Uso de recursos genéticos para la conservación de espécies amenazadas.
Workshop at ConGRESS (Spain)
2012 Overview in lagomorph research: the notable and the overlooked
General Assembly of the World Lagomorph Society at the 4th World Lagomorph Conference, (Vienna, Austria)
2012 How Conservation Genomics can improve the preservation of wild lagomorph population Workshop of the RGB-Net (COST Action “A Collaborative European Network on Rabbit Genome Biology – RGB-Net”
4th World Lagomorph Conference, (Vienna, Austria)
2011 When mtDNA is misleading: the ubiquity of mountain hare mitochondria in several other species due to secondary introgression Seminar Series – EBD
Estação Biológica de Doñana, (Seville, Spain)
2011 Reticulate evolution and recurrent mitochondrial DNA introgression in hares (Lepus spp.). VIth European Congress of Mammalogy
(Paris, France)
2011 Jackrabbits and hares: an intriguing case of reticulate evolution. Seminar Series, Wildlife Biology Program
College of Forestry and Conservation, University of Montana (Missoula, United States)
2011 The wild rabbit (Oryctolagus cuniculus) in the Iberian Peninsula: current status, genetic structure and population management II International European Rabbit Congress
(Toledo, Spain)
2010 From elephants to mice: examples of better conservation based on non-invasive genetic sampling . International Workshop on “Wildlife Research Techniques in Rugged Mountainous Asian landscapes
IUWICE (Bhutan)
2010 Estructura genética y manejo de las poblaciones de conejo silvestre II International European rabbit seminar
University of Cordoba (Cordoba, Spain)
2009 Ciência y Tecnología al servicio de la Caza, de la Conservación y de la Sociedad. Técnicas forenses: CSI Animal Caza, Conservación y Sociedad: una decada de Encontros
IREC, University of Castilla La Mancha (Ciudad Real)

Supervision

Thesis Title
Role
Degree Subject (Type)
Institution / Organization
2022/11/01 - Current On the path of the elusive sandgrouse: a multi-scale framework for the conservation of two endangered steppe land birds
Co-supervisor
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2022/03/01 - Current Epidemiological investigation in populations of European wildcats (Felis silvestris), sympatric domestic cats (Felis catus) and their hybrids, representing different gradients of conservation and disturbance: a multi-disciplinary and transboundary approach
Co-supervisor
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2020/11/01 - Current Trophic ecology of the endemic Azores Woodpigeon Columba palumbus azorica
Co-supervisor
Biologia (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2019/10/01 - Current Big and small: How do we fit all? An integrative framework for investigating character displacement
Co-supervisor
Biodiversity, Genetics and Evolution, BIODIV (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2018 - Current Tuberculosis in Asian Elephant: an One Health Perspective
Supervisor of Rajesh Man Rajbhandari
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2017 - Current Disease ecology in wild rabbit (Oryctolagus cuniculus algirus) populations: a model for individual- and population-scale analysis of host-pathogen dynamic.
Supervisor of Nuno Santos
Pos-doc FCT grant (SFRH/BPD/116596/2016) (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2016 - Current Towards Next-generation Biodiversity Monitoring: Improving Freshwater Quality Assessment using DNA Metabarcoding
Co-supervisor of Filipa Matos Silva Martins
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2016 - Current Population structure and genbetic diversity of the Brown Howling Monkey, Alouatta guariba clamitans, after an oubreack of yellow feber in Brasil
Co-supervisor of Joana Beschorner da Veiga
Biodiversidade, Genética e Evolução (Degree)
Universidade do Porto Faculdade de Ciências, Portugal
2016 - Current Conservation genetics of the hirola antelope relict: an entire mammal genus on the brink of extinction.
Co-supervisor of Michael Jowerz
Pos-doc FCT grant (SFRH/BPD/109148/2015) (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2013 - Current The role of landscape connectivity and social organization on establishment and dispersion of European wild rabbits (Oryctolagus cuniculus)
Co-supervisor of Claudia Sofia Marques Encarnação
Universidade de Évora, Portugal
2021/03/01 - 2025/03/01 Myxomatosis in the Iberian hares: epidemiology, risk factors and genetic basis of host susceptibility
Supervisor
Biodiversity, Genetics and Evolution, BIODIV (PhD)
Faculdade de Ciências da Universidade do Porto, Portugal
2015/03 - 2023/11/30 Small mammals distribution and genetic diversity along altitudinal gradients in Costa Rica
Supervisor of Alexander Gómez Lépiz
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2022 - 2022 Capturing leporids across space and time: a molecular perspective
Supervisor
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2022 - 2022 Assessing the distribution and genetic diversity of the broom hare, Lepus castroviejoi, for improving conservation planning
Supervisor
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2022 - 2022 Myxomatosis in the Iberian hares: epidemiology, risk factors and genetic basis of host susceptibility
Supervisor
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2022 - 2022 Eco-epidemiology at the European wildcat (Felis silvestris) - domestic cat (Felis catus) interface: a multi-disciplinary and trans-boundary approach
Supervisor
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2022 - 2022 Connectivity, trophic ecology and conservation of the threatened Pyrenean Desman (Galemys pyrenaicus)
Supervisor
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2016 - 2021/03/02 The genetic basis of adaptive traits in a natural system: seasonal coat color change and altitude adaptation in white-tailed jackrabbits (Lepus townsendii)
Co-supervisor of Ana Mafalda Sousa Ferreira
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2019/01/10 - 2020/12/01 Feeding ecology of the Pyrenean desman in NW Iberia revealed by DNA metabarcoding: the role of habitat suitability.
Co-supervisor
Master in Biodiversity, Genetics and Evolution (Master)
Faculdade de Ciências da Universidade do Porto, Portugal
2016 - 2019 ADAPTIVE POTENTIAL TO CAMOUFLAGE MISMATCH
Co-supervisor of Marketa Zimova
Wildlife Biology (PhD)
University of Montana College of Forestry and Conservation, United States
2014 - 2018 Genome admixture with massive mitochondrial DNA introgression in hares (Lepus spp.): the relative roles of demography and natural selection
Co-supervisor of Fernando António Pereira da Silva Ferreira Seixas
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2013 - 2018 The evolutionary history and conservation of an endemic and threatened Iberian rodent: the Cabrera vole (Microtus cabrerae)
Co-supervisor of Soraia Isabel Moreira Barbosa
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2013 - 2017 Evolution of immunoglobulins in Leporids : inferences of genetic resistance against pathogens
Supervisor of Ana Maria Pinheiro Rombert Pinhão
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2012 - 2017 Conservation of Genetic Diversity in Insular Systems under Climate Change Scenarios: a multi-disciplinary approach integrating phylogenetics, geostatistics, species distribution modeling, and reserve selection algorithms to the reptiles of the Socotra archipelago. Pos-doc grant from FCT (SFRH/BPD/79913/2011), 2012-2017.
Supervisor of Raquel Vasconcelos
2012 - 2017 Host-pathogen Interactions: The Role of Host Genetics and Co-infection in Natural Populations
Co-supervisor of João Luís Teixeira de Queirós
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2012 - 2017 Conservation of Genetic Diversity in Insular Systems under Climate Change Scenarios: a multi-disciplinary approach integrating phylogenetics, geostatistics, species distribution modeling, and reserve selection algorithms to the reptiles of the Socotra archipelago.
Supervisor of Raquel Vasconcelos
Pos-doc grant from FCT (SFRH/BPD/79913/2011), (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2015 - 2016 Population history and taxonomy of African hares (genus Lepus) inferred from genetic variation
Co-supervisor of Sara Ribeiro Barbosa Almendra Lado
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2011 - 2016 Ecological Interactions and Species Coexistence in Iberian Mesocarnivore Communities
Co-supervisor of Pedro Seabra Monterroso
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2015 Understanding the genetic basis of seasonal coat color change in the snowshoe hare, Lepus americanus : an RNA sequencing approach
Co-supervisor
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2015 Assessing hybridization between wildcat and domestic cat : the particular case of Iberian Peninsula and some insights into North Africa
Supervisor
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2014 - 2015 Assessing hybridization between wildcat and domestic cat: the particular case of Iberian Peninsula and some insights into North Africa.
Supervisor
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2011 - 2015 Environment and biodiversity: a multidisciplinary approach to dynamic patterns in the Iberian Peninsula
Co-supervisor
Biodiversidade, Genética e Evolução (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2008 - 2015 Natural selection and genome admixture: tracing adaptive and non-adaptive evolutionary processes. Pos-doc grant from FCT (SFRH/BPD/43264/2008), 2008-2015
Supervisor
2008 - 2015 Natural selection and genome admixture: tracing adaptive and non-adaptive evolutionary processes.
Supervisor of José Fernando Melo-Ferreira.
Pos-doc grant from FCT (SFRH/BPD/43264/2008) (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2013 - 2014 Mammalian mesocarnivore communities in the Iberian Peninsula: time-series and large-scale analysis for successful top-order predator reintroductions. Pos-doc grant from FCT (SFRH/BPD/88643/2012). 2013-2014
Supervisor of Catarina Manuel Andrade de Campos Ferreira.
2013 - 2014 Integrating the power of macroecology and genomics to extract further insights for conservation biology: Lepus spp. as case study. Pos-doc grant from FCT (SFRH/BPD/90320/2012), 2013-2014.
2013 - 2014 Combining movement and genetic data to assess a forest carnivore´s response to forest fragmentation
Supervisor of André Filipe Plácido Lourenço
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2013 - 2014 Regional and fine-scale molecular diversity of the Cabrera vole (Microtus Cabrerae)
Supervisor of Clara Maria Mendes Alves Ferreira
Biodiversidade, Genética e Evolução (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2013 - 2014 Seasonal coat color variation in hares (Lepus spp).
Co-supervisor of Ana Mafalda Sousa Ferreira
Mestrado em Biodiversidade, Genética e Evolução (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2013 - 2014 Integrating the power of macroecology and genomics to extract further insights for conservation biology: Lepus spp. as case study.
Supervisor of Pelayo Acevedo Lavandera
Pos-doc grant from FCT (SFRH/BPD/90320/2012), (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2012 - 2014 Regional and fine-scale molecular diversity of the Cabrera vole (Microtus cabrerae).
Supervisor of Clara Ferreira
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2012 - 2014 Análise da dieta da Marta (Martes martes) e da Fuinha (Martes foina) na Peninsula Ibérica.
Co-supervisor of Pedro Rebelo
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2012 - 2014 A Tuberculose e Pseudo-Raiva no javali em Portugal: implicações para a conservação.
Supervisor of Vanessa Alexandra Vieira Soeiro
Mestrado em Biologia da Conservação (Master)
Universidade de Évora, Portugal
2012 - 2014 From conservation genetics to conservation genomics: building animal models to understand the relative importance of adaptation and low effective population size in vertebrates for long-term conservation.
Supervisor of Maria Raquel Barata Godinho.
Pos-doc grant from FCT (SFRH/BPD/80969/2011), (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2007 - 2014 Towards a wide genetic approach for the European wildcat [Felis silvestris silvestris] conservation: improving noninvasive molecular techniques, population analysis and admixture inferences
Co-supervisor of Rita Isabel Ribeiro Miranda de Oliveira
Biologia (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2007 - 2014 Cryptic Speciation in the Field Vole (Microtus agrestis): Insights from Genetic, Karyotypic and Morphometric data
Co-supervisor of Joana Maria Jorge Pereira de Castro Paupério
Biologia (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2011 - 2013 Combining movement and genetic data to assess a forest carnivore’s response to forest fragmentation.
Supervisor
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2011 - 2013 The Speciation History of North American Hares (Lepus spp.): Divergence with Gene Flow.
Co-supervisor of Fernando Ferreira Seixas
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2011 - 2012 Mammalian mesocarnivore communities in the Iberian Peninsula: time-series and large-scale analysis for successful top-order predator reintroductions.
Supervisor of Catarina Manuel Andrade de Campos Ferreira.
Pos-doc grant from FCT (SFRH/BPD/88643/2012). (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2010 - 2012 Decoding the mechanisms underlying mitogenomic evolution in hares (Lepus spp.).
Co-supervisor of Joana Maria de Almeida Pereira Vilela
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2008 - 2012 Reticulate Evolution Among Hares (lepus Spp.): the Combined Effects of Glacial Cycles, Demography and Natural Selection Inferred from Molecular Variation
Co-supervisor of José Fernando Melo Ferreira
Biologia (PhD)
Universidade do Porto Faculdade de Ciências, Portugal
2007 - 2012 Hybridization, evolution and conservation: Investigating natural and human-mediated admixture processes between divergent genomes in model species from the Iberian Peninsula.
Supervisor of Maria Raquel Barata Godinho.
Pos doc grant from FCT (SFRH/BPD/36021/2007), 2007-2012. (Other)
Universidade do Porto Centro de Investigação em Biodiversidade e Recursos Genéticos, Portugal
2010 - 2011 Monitorização de populações de coelho-bravo, Oryctolagus cuniculus: análise comparativa de densidades absolutas e índices de abundância relativa.
Supervisor of Hugo Lousa
Mestrado em Ecologia e Ordenamento do Território (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2010 - 2011 The role of the X chromosome on reticulate evolution of hares (Lepus spp.).
Co-supervisor of Liliana Maria da Silva Farelo
Mestrado em Biodiversidade, Genética e Evolução (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2010 - 2011 Padrões Biogeográficos de três espécies de mesocarnivoros simpátricos em Portugal: modelação ecológica e distribuição
Supervisor of Pedro Manuel Gomes Morreira
Mestrado em Biodiversidade e Recursos Genéticos
Universidade do Porto, Faculdade de Ciências, Portugal
2010 - 2011 Comparação de dois métodos de monitorização de carnívoros. Armadilhagem de pêlo vs. Armadilhagem fotográfica.
Supervisor
Mestrado em Biodiversidade, Genética e Evolução. (Master)
Universidade do Porto Faculdade de Ciências, Portugal
2009 - 2011 Molecular species identification of the Iberian rodents.
Supervisor
Mestrado em Biodiversidade, Genética e Evolução, (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2008 - 2009 Aplicação de métodos moleculares não invasivos no estudo de carnívoros Ibéricos.
Supervisor
Mestrado em Biodiversidade e Recursos Genéticos (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2008 - 2009 Ecological and human determinants in the genetic structure and variability of the Iberian wolf in Portugal.
Supervisor
Mestrado em Biodiversidade, Genética e Evolução.
Universidade do Porto, Faculdade de Ciências, Portugal
2007 - 2009 Estudo da reprodução do coelho-bravo na região de Alto Tâmega.
Supervisor of Jorge Mata Pires
Mestrado em Gestão e Conservação da Natureza (Master)
Instituto Politécnico de Bragança, Portugal

Universidade dos Açores, Portugal
2006 - 2008 Análise paleo-climática da Península Ibérica e sua aplicação em estudos filgeográficos.
Supervisor of Pedro Tarroso
Mestrado em Biodiversidade e Recursos Genéticos (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2006 - 2007 Revisão da fauna do género Rhagonycha (Insecta, Coleoptera, Cantharidae) de Portugal continental. Taxonomia, distribuição geográfica e fenologia.
Supervisor
Mestrado em Biodiversidade e Recursos Genéticos
Universidade do Porto, Faculdade de Ciências, Portugal
2005 - 2006 Distribuição, selecção de habitat e actividade do gato-bravo (Felis silvestris) no parque natural do vale do Guadiana.
Supervisor of Pedro Seabra Monterroso
Mestrado em Biodiversidade e Recursos Genéticos (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2005 - 2006 Natural hybridization between the Iberian hare (Lepus granatensis) and the brown hare (L. europaeus) in northern Iberian Peninsula.
Supervisor of Helder Freitas
Mestrado em Biodiversidade e Recursos Genéticos. (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2004 - 2005 Single nucleotide polymorphism identification in partridge (Alectoris sp) and quail (Coturnix coturnix). Its application to detect hybridisation with exotic species or domestic forms.
Supervisor of Ângela Maria Oliveira Ribeiro
Mestrado em Biodiversidade e Recursos Genéticos (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2004 - 2005 Analysis of hybridization between wild and domestic cat in Portugal: implications for conservation.
Supervisor of Rita Isabel Ribeiro Miranda de
Mestrado em Biodiversidade e Recursos Genéticos.
Universidade do Porto, Faculdade de Ciências, Portugal
2004 - 2005 Caracterização genética do javali na Península Ibérica e das raças suínas Portuguesas, Bísara e Alentejana. Variabilidade genética ao nível do DNA mitocondrial e dos genes da cor da pelagem MC1R e KIT.
Supervisor of Iris Pinheiro
Mestrado em Biodiversidade e Recursos Genéticos.
Universidade do Porto, Faculdade de Ciências, Portugal
2001 - 2003 Avaliação do impacto da implementação de medidas de gestão do habitat em populações de coelho-bravo (Oryctolagus cuniculus algirus) no Parque Natural do Sudoeste Alentejano e Costa Vicentina
Supervisor of Catarina Manuel Andrade de Campos Ferreira
Mestrado em Ecologia Aplicada (Master)
Universidade do Porto, Faculdade de Ciências, Portugal
2001 - 2002 Ecologia de Lebre-ibérica (Lepus granatensis) num ecossistema de montanha no Parque Natural da Serra da Estrela.
Supervisor of Joana Maria Jorge Pereira de
Mestrado em Ecologia Aplicada (Master)
Universidade do Porto, Faculdade de Ciências, Portugal

Event organisation

Event name
Type of event (Role)
Institution / Organization
2016/05/01 - 2016/05/04 Congenomics. Final Simposium of the International Netlwork on Conservation Genomics (2016 - 2016)
Conference
CIBIO/InBIO Associate Lab, University of Porto, Portugal
2004/07/26 - 2004/07/31 2nd World Lagomorph Conference (2004 - 2004)
Congress

Jury of academic degree

Topic
Role
Candidate name (Type of degree)
Institution / Organization
2023/12/04 Rediscovering Angolan Biodiversity: Patterns and regulation processes underlying large mammal community structure across South Angola
President of the jury
Luís Filipe Pinho Rocha (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2023/11/10 Inferring evolutionary trends in Southern African geckos: from wide to local perspectives.
President of the jury
Javier Lobon Rovira (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2023/11/06 Influence of landscape and social dynamics on grey wolf population genetics and demography
President of the jury
Maria Carolina Pacheco de Freitas (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2023/07/21 Functional ecology of the associations between form and performance in scorpions.
President of the jury
Pedro Jorge Lobo Martins Coelho (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2023/02/02 A genome-wide perspective on the evolutionary trajectory of wolves in human-dominated landscapes
President of the jury
Diana Carina da Costa Lobo (PhD)
Universidade do Porto, Faculdade de Ciências, Portugal
2019 President over 50 Juries of the Master in Biodiversity, Genetics and Evolution
President of the jury
Mestrado em Biodiversidade, Genética e Evolução (Master)
Faculdade de Ciências da Universidade do Porto, Portugal
2018 Molecular approaches to the conservation and management of Bengal tiger in Nepal Dibesh Karmacharya (PhD)
Griffith University - Gold Coast Campus, Australia
2018 Distribución, cuantificación y caracterisación de genes de virulencia de Escherichia coli en reservorios animals, humanos y medioambientales
(Thesis) Main arguer
Ana Isabel Vela Alonso (PhD)
IREC, University of Castilla-la –Mancha, Spain
2018 Venenos e envenamentos por serpentes de imprtância médica em Angola
(Thesis) Main arguer
Paula Regina Simões de Oliveira (PhD)
Universidade do Porto Faculdade de Farmácia, Portugal
2018 Evolutionary history of sympatric rainbow skinks from the Australian Monssonal tropics
(Thesis) Main arguer
Ana Catarina Afonso (PhD)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2017 Stress raeaction, habitat use and the consequences of climate change on mountain hare, Lepus timidus, in the Alps
Thesis Member
Maik Rhenus (PhD)
University of Natural Resources and Life Science (BOKU), Austria
2013 Daily activity pattern, space use and habitat preferences of the European hare (Lepus europaeus)
Thesis Member
Stéphanie C. Schai-Braun (PhD)
Universität für Bodenkultur Wien Department für Integrative Biologie und Biodiversitätsforschung, Austria
2013 Environment and biodiversity: a multidisciplinary approach to dynamic patterns in the Iberian Peninsula
Thesis Member
Faculdade de Ciências da Universidade do Porto (PhD)
2012 Landscape connectivity and fragmentation: the case of Mediterranean amphibians inhabiting temporary pond networks
(Thesis) Main arguer
Mirjam Susanne van de Vliet (PhD)
Universidade do Algarve Centro de Investigação Tecnológica do Algarve, Portugal
2012 Colonisation history of a ubiquitous invasive, the house mouse (Mus musculus domesticus): a global, continental and insular perspective
(Thesis) Main arguer
Sofia Isabel Vieira Gabriel (PhD)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2010 Persistence and coexistence of spatially structured populations in heterogeneous environments: the case of Cabrera and water voles in mediterranean farmland
(Thesis) Main arguer
Ricardo Miguel Miguéns Cardoso Cadete Pita (PhD)
Universidade de Évora, Portugal
2010 Factors influencing the distribution of the lusitanian and the mediterranean pine voles (Microtus lusitanicus and M. duodecimcostatus) in Portugal: a multidisciplinar approach
Thesis Member
Sara Maria Lopes dos Santos (PhD)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2010 The rabbit as an agricultural pest in its native distribution range
(Thesis) Main arguer
Isabel Catalán Barrio (PhD)
IREC, University of Castilla-la –Mancha, Spain
2008 Reticulate evolution among hares (Lepus spp.): the combined effects of glacial cycles, demography and natural selection inferred from molecular variation
Thesis Member
José Fernando Melo-Ferreira (PhD)
2008 Population ecology of two species of cave-Dwelling bats (Miniopterus schreibersii and Myotis myotis)
(Thesis) Main arguer
Maria Luísa Sequeira Viana Rodrigues (PhD)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal

Université de Montpellier, France
2008 Restauración de las poblaciones de conejo de monte y mejora de la gestión para su conservación
(Thesis) Main arguer
Carlos Rouco Zufiaurre (PhD)
IREC, University of Castilla-la –Mancha, Spain
2007 The Madeira house mouse chromosomal system: a multidisciplinary approach to study mechanisms involved in its evolution
(Thesis) Main arguer
Ana Claudia Filipe de Carvalho Nunes Oliveira (PhD)
Fundação da Faculdade de Ciências da Universidade de Lisboa, Portugal
2007 El efecto de los depradadores en el comportamento y en la respuesta fisiológica de estrés en el conejo (Oryctolagus cuniculus
(Thesis) Main arguer
Raquel Monclús Burgoa (PhD)
University Autonomous of Madrid, Spain
2007 Filogenia molecular de las liebres ibéricas (Lepus castroviejoi, Lepus europaeus y Lepus granatensis), a partir del ADN mitocondrial
(Thesis) Main arguer
María Jesús Sanz Martín (PhD)
Universidad de Alcalá de Henares, Spain
2006 Evolução dos genes da cadeia a (HBA) e da cadeia ß (HBB) da hemoglobina do coelho (Oryctolagus cuniculus) Maria Rita Monteiro de Lencastre Campos (PhD)
Faculdade de Ciências da Universidade do Porto, Portugal
2006 Gestión Cinegética e Conservación del Conejo de Monte
(Thesis) Main arguer
Vicente Piorno Gonzaléz (PhD)
Universidade de Vigo, Spain

Association member

Society Organization name Role
2006 - Current World Lagomorph Society President

Conference scientific committee

Conference name Conference host
2019/07/01 - 2019/07/04 Congreso Ibérico de Ciencia Aplicada a los Recursos Cinegéticos /Iberian Congress of Applied Science to Game Species Management IREC, University of Castilla La Mancha
2015/08/17 - 2015/08/20 Workshop on Lagomorph Biology, European Congress of Mammalogy ECM7 University of Stockholm
2011/11/24 - 2011/11/25 II Congresso Internacional sobre el conejo de monte Toledo, Spain
2008/11/10 - 2008/11/13 3rd World Lagomorph Conference, University of Morellia, Mexico

Course / Discipline taught

Academic session Degree Subject (Type) Institution / Organization
2023/05/01 - Current Director of the PhD Program in Biodiversity, Genetics and Evolution BIODIV, at the Faculty of Sciences, University of Porto, in association with the University of Lisbon Biodiversidade, Genética e Evolução (Doutoramento) Universidade do Porto, Faculdade de Ciências, Portugal
2014/03 - Current Molecular Genetics and Cytogenetics Biology (Licenciatura) Universidade do Porto Faculdade de Ciências, Portugal
2013/03 - Current Management and Conservation of Birds and Mammals Biology (Licenciatura) Universidade do Porto, Faculdade de Ciências, Portugal
2006 - Current Conservation Genetics Conservation Genetics (Mestrado) Universidade do Porto Faculdade de Ciências, Portugal

Journal scientific committee

Journal title (ISSN) Publisher
2012 - Current European Journal of Wildlife Research (1439-0574) Springer-Verlag