???global.info.a_carregar???
Ana Barroso Abecasis is Portuguese and was born in Lisbon. Ana is an Associate Professor at Institute for Hygiene and Tropical Medicine (IHMT), NOVA University of Lisbon since May 2024. She trained as a medical doctor and as a pharmacist and finalised her PhD in Medical Sciences at the Katholieke Universiteit Leuven, Belgium in May 2009. Ana is also a specialist in Bioinformatics. She teaches Research Methods in Health, Computational Biology and Bioinformatics, Health of the Vulnerable Populations and Global Health at IHMT and at the Faculty of Medical Sciences-NOVA. She supervises or supervised 9 PhD thesis, 12 master thesis, 5 post-doc researchers and 7 short-term visitor researchers. Coordinates or coordinated 6 national and international projects and participates or participated in around 20 national or international projects. She coordinates the research line of Global Pathogen Dispersion & Mobility of Populations at the Global Health and Tropical Medicine Research Center, where she was also involved in the development of the research strategy and infrastructure of bioinformatics. She is member of several European networks of antiviral drug resistance, including EUResist and European Society for Translational Antiviral Research, and Bioinformatics networks such as European Viruses Bioinformatics Center (EVBC). Her research interests include Virology, Microbiology, Antimicrobial and Antiviral Drug Resistance, Bioinformatics, Research Methods in Health, Transmission of Infectious Diseases, Evolution and Global Health. In 2012, Ana received the L'Oreal Portugal FCT Unesco Medal of Honour for Women in Science, in 2016 and 2017 she received the prize of Gilead Génese programme and in 2019 received the Ricardo Camacho Award from Associação Portuguesa para o Estudo Clínico da SIDA and in 2022 nominated for Activa Inspiring Women Awards. She received 3 awards for best oral communication and 1 for best poster presentation in national and international conferences, always as last author. Ana has published around 101 manuscripts in international peer-reviewed journals, including Lancet Infectious Diseases, Clinical Infectious Diseases and AIDS; 4 conference papers and 3 book chapters. Accumulates over 3200 citations with an h-index of 28 (Google Scholar) or an h-index of 21 (ResearcherID). Ana was member of the Council of the NOVA University of Lisbon between 2018 and 2022, coordinated the Public Health Specialization Course for Medical Doctors and is member of the Scientific Committee of the Master for Computational Biology and Bioinformatics since 2021 and of the Masters for Public Health and Development since 2018. Ana is member of the Advisory Board of the Fast Track Cities Initiative- Lisbon and of the Portuguese NGO Grupo de Ativistas em Tratamentos VIH (GAT). Between 2005 and 2017, she organized (2 editions in Lisbon) and lectured at the International Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology. In 2011 and in 2017, she organized the first Bioinformatics courses in Belém do Pará (Brasil) and in Praia (Cape Verde).
Ler resumo completo ↓
Identificação

Identificação pessoal

Nome completo
Ana Barroso Abecasis
Género
Feminino

Nomes de citação

  • Abecasis, Ana
  • Abecasis AB
  • Abecasis A
  • Barroso Abecasis A

Identificadores de autor

Ciência ID
0817-056B-9B7C
ORCID iD
0000-0002-3903-5265
Google Scholar ID
https://scholar.google.pt/citations?user=wZb3dUkAAAAJ&hl=pt-PT
Researcher Id
B-6295-2009
Scopus Author Id
8835604200

Endereços de correio eletrónico

  • ana.abecasis@gmail.com (Profissional)
  • ana.abecasis@ihmt.unl.pt (Pessoal)

Domínios de atuação

  • Ciências Médicas e da Saúde - Ciências da Saúde - Saúde Pública e Saúde Ambiental
  • Ciências Exatas - Ciências da Computação e da Informação - Bioinformática

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Inglês Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1)
Francês Utilizador elementar (A1) Utilizador elementar (A1) Utilizador elementar (A1) Utilizador elementar (A1)
Espanhol; Castelhano Utilizador elementar (A1) Utilizador independente (B1) Utilizador elementar (A1) Utilizador elementar (A1)
Formação
Grau Classificação
2014
Concluído
 Mestrado Integrado em Medicina (Mestrado integrado)
Universidade Nova de Lisboa Faculdade de Ciências Médicas, Portugal
"n/a" (TESE/DISSERTAÇÃO)
 16
2009/05/19
Concluído
 Doctorate in Medical Sciences (Faculty of Medicine) (Doutoramento)
Katholieke Universiteit Leuven Rega Institute for Medical Research, Bélgica
"The impact of genetic diversity on HIV-1 molecular epidemiology and antiviral drug resistance" (TESE/DISSERTAÇÃO)
 Não aplicável
2002
Concluído
 CIENCIAS FARMACEUTICAS (Licenciatura)
Universidade de Lisboa Faculdade de Farmácia, Portugal
"CIENCIAS FARMACEUTICAS" (TESE/DISSERTAÇÃO)
 15 Valores
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento 		Empregador
2014/01/01 - 2019/04/30 Investigador Auxiliar Convidado (carreira) (Investigação) Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
2010/01/01 - 2013/11/30 Pós-doutorado (Investigação) Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2009/03/01 - 2009/12/30 Investigador (Investigação) Instituto Gulbenkian de Ciência, Portugal
Instituto Gulbenkian de Ciência, Portugal
2004/10/01 - 2009/05/19 Investigador (Investigação) Katholieke Universiteit Leuven Rega Institute for Medical Research, Bélgica
Katholieke Universiteit Leuven Rega Institute for Medical Research, Bélgica

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento 		Empregador
2024/05 - Atual Professor Associado (Docente Universitário) Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2019/05/01 - Atual Professor Auxiliar (Docente Universitário) Universidade Nova de Lisboa, Portugal
Universidade Nova de Lisboa, Portugal
(...)

Cargos e Funções

Categoria Profissional
Instituição de acolhimento 		Empregador
2018 - 2022 Conselho geral ou orgão correspondente Universidade Nova de Lisboa, Portugal
2019/11/06 - 2021/04/30 Diretora da UEI de Saúde Pública Internacional e Bioestatística Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Projetos

Bolsa

Designação Financiadores
2016/09 - 2019/09 ZIKAlliance: A global alliance for Zika virus control and prevention
734548
 European Commission
2016/01 - 2018/12 Genómica, dados sócio-comportamentais e dados clínicos para prevenir a transmissão do VIH entre migrantes: uma abordagem inovadora
Provided by PTCRIS: 145711
 Fundação para a Ciência e a Tecnologia
2016 - 2018 Characterization of drug-resistant TB and HIV, and associated socio-behavioral factors among migrants in Lisbon, Portugal
0004
Centro Hospitalar de Lisboa Ocidental EPE, Portugal

Instituto Universitário Egas Moniz Centro de Investigação Interdisciplinar Egas Moniz, Portugal

Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Gilead Sciences Lda
Concluído
2009 - 2014 Collaborative HIV and Anti-HIV Drug Resistance Network (CHAIN)
Health-F3-2009-223131
 European Commission

Projeto

Designação Financiadores
2022/01/01 - Atual MARVEL: Minimizing the emergence and dissemination of HIV-1 drug resistance in PALOPs through an evidence-based portable high-throughput sequencing and computational approach.
PTDC/SAU-PUB/4018/2021
Investigador responsável
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
 Fundação para a Ciência e a Tecnologia
Em curso
2021/03/01 - Atual VAX-TRUST: Addressing vaccine hesitancy in Europe
965280
Investigador
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
 European Commission
Em curso
2020/05/01 - Atual Resposta à pandemia de Covid-19 num contexto de desigualdades sociais em saúde: um estudo transversal na população nativa e imigrante da Amadora
Projeto nº 065
Investigador
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
 Fundação para a Ciência e a Tecnologia
Em curso
2020 - Atual Construção de uma base de dados sócio-demográficos, clínicos e genómicos para estudar a epidemia do VIH em Portugal
HIV-DatabasePT
Investigador responsável
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
Em curso
2021/01/01 - 2025/12/31 Translação e Inovação para a Saúde Global
LA/P/0117/2020
10.54499/LA/P/0117/2020
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal

Universidade Nova de Lisboa, Portugal

Universidade NOVA de Lisboa Comprehensive Health Research Centre, Portugal

Universidade de Lisboa Faculdade de Medicina Dentária, Portugal

Universidade de Coimbra, Portugal

Universidade de Évora, Portugal

Universidade Nova de Lisboa ¿Laboratório de Instrumentação Engenharia Biomédica e Física da Radiação, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2021/02/01 - 2024/01/31 Determinantes e necessidades de saúde das crianças migrantes num contexto de pandemia: Um estudo longitudinal para a Região de Lisboa e Vale do Tejo
PTDC/SAU-SER/4664/2020
Universidade Nova de Lisboa, Portugal

Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2022/01/01 - 2023/12/31 RNAscope dos tecidos linfóides de indivíduos infectados pelo HIV-2 ou pelo HIV-1
Programa Gilead Génese 2021
Universidade de Lisboa Instituto de Medicina Molecular João Lobo Antunes, Portugal
 Gilead Sciences Lda
Em curso
2019/06/01 - 2022/06/01 Characterization of HIV-1 Drug Resistance to Integrase Inhibitors in Portugal: clinical and economic impact for treatment and drug resistance testing guidelines
PTDC/SAU-INF/31990/2017.
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
 Fundação para a Ciência e a Tecnologia
Em curso
2018/10/01 - 2021/09/30 Caracterização da resistência aos Inibidores de Integrase usados no tratamento do VIH-1 em Portugal: Impacto clínico e económico para as guidelines de tratamento e de avaliação de resistência antiretroviral
PTDC/SAU-INF/31990/2017
Universidade Nova de Lisboa, Portugal
 Fundação para a Ciência e a Tecnologia
Em curso
2018/11/01 - 2020/09/01 Percurso de Saúde da Criança Imigrante: estudo de coorte para o Concelho da Amadora
PT/2018/FAMI/350
Investigador
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
 Alto Comissariado para as Migrações
Concluído
2016/07/01 - 2020/05/31 Genomics, socio-behavioral and clinical data to prevent HIV transmission in migrants: an innovative approach
PTDC/DTP-EPI/7066/2014
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal

Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal

Centro Hospitalar de Lisboa Ocidental EPE, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2019/01/01 - 2019/12/31 Saúde Global e Medicina Tropical
UID/Multi/04413/2019
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal

Universidade Nova de Lisboa, Portugal

Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2014/01/01 - 2018/12/31 Stopping the spread: a multidisciplinary approach to understand HIV-1 transmission
IF/01305/2013/CP1165/CT0001
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
 Fundação para a Ciência e a Tecnologia
Concluído
2017 - 2018 Importância dos diagnósticos tardios na propagação da epidemia de VIH em Portugal: uma abordagem multidisciplinar
LatePresenters
Investigador responsável
Universidade Nova de Lisboa Saúde Global e Medicina Tropical, Portugal
 Gilead Sciences
Concluído
2013/07/01 - 2017/06/30 Monitorização Biomolecular e Epidemiológica de Transmissão de Resistências aos Antiretrovirais entre Doentes HIV, Co-Infecções com Hepatites e Padrões de Transmissão a Decorrer na Europa
HIVERA/0001/2011
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal

Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
2013/07 - 2016/06 BEST HOPE: Bio-Molecular and Epidemiological Surveillance of HIV Transmitted Drug Resistance, Hepa-titis Co-Infections and Ongoing Transmission Patterns in Europe
Provided by PTCRIS: 131757
131757
0005
Centro Hospitalar de Lisboa Ocidental EPE, Portugal

Instituto Universitário Egas Moniz Centro de Investigação Interdisciplinar Egas Moniz, Portugal

Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
European Commission

Commission Européenne Représentation au Luxembourg
Concluído
2010/01/01 - 2013/11/30 COMPARATIVE STUDY OF THE SELECTIVE PRESSURE, REPLICATION AND TRANSMISSION DYNAMICS OF HIV-1 SUBTYPES
SFRH/BPD/65605/2009
 Fundação para a Ciência e a Tecnologia
Concluído
2010/02/01 - 2013/01/31 Estudo sobre a diversidade de agents patogénicos na epidemiologia das doenças infecciosas e vacinas
PTDC/BIA-BEC/103484/2008
Fundação Calouste Gulbenkian, Portugal

Universidade Nova de Lisboa Instituto de Tecnologia Química e Biológica, Portugal

Fundação Oswaldo Cruz, Brasil
Fundação para a Ciência e a Tecnologia
Concluído
2010/02 - 2013/01 Exploring pathogen diversity in disease epidemiology and vaccine research
103484
Provided by PTCRIS: 103484
Investigador
Fundação para a Ciência e a Tecnologia, I.P.
2006 - 2009 European Cohort Coordinating Network on HIV Drug Resistance
LSHP-CT-2006-518211
 European Commission
2003 - 2006 SPREAD: Strategy to Control SPREAD of HIV Drug Resistance
QLK2-CT-2001-01344
 European Commission
Concluído

Outro

Designação Financiadores
2022 - Atual Prevenção da emergência e disseminação de resistência aos antirretrovirais nos PALOPs através de uma abordagem de sequenciação portátil de nova geração e computacional
PTDC/SAU-PUB/4018/2021
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
 Fundação para a Ciência e a Tecnologia
Em curso
Produções

Publicações

Artigo em conferência
  1. Libin, P.; Hernalsteen, L.; Theys, K.; Gomes, P.; Abecasis, A.; Nowé, A.. "Bayesian inference of set-point viral load transmission models". 2018.
  2. Correia, Vanessa; Abecasis, Ana; Rebelo de Andrade, Helena. "Uncovering the role of positive selection in the evolutionary pathways to influenza virus resistance or reduced inhibition by neuraminidase inhibitors". 2016.
Artigo em revista
  1. Jandondo, Domingos; Pimentel, Victor; Vigário, João; Vienga, Pedro; Sebastião, Joana M. K.; Mateus, Anabela; Comandante, Felícia; et al. "Sociodemographic and clinical features related to hepatitis B virus infection among rejected blood donors in Luanda, Angola". Health Science Reports 7 8 (2024): http://dx.doi.org/10.1002/hsr2.2287.
    10.1002/hsr2.2287
  2. Mafalda N. S. Miranda; Victor Pimentel; Jacqueline Graça; Sofia G. Seabra; Cruz S. Sebastião; António Diniz; Domitília Faria; et al. "Sociodemographic, Clinical, and Behavioral Factors Associated with Sexual Transmitted Infection among HIV-1 Positive Migrants in Portugal: Are There Differences between Sexes?". Pathogens (2024): https://www.mdpi.com/2076-0817/13/7/598.
    10.3390/pathogens13070598
  3. Victor Pimentel; Marta Sofia Pereira Pingarilho; Cruz S. Sebastião; Mafalda Miranda; Maria Fátima Gonçalves; Joaquim Cabanas; Inês Costa; et al. "Applying Next-Generation Sequencing to Track HIV-1 Drug Resistance Mutations Circulating in Portugal". Viruses (2024): https://www.mdpi.com/1999-4915/16/4/622.
    10.3390/v16040622
  4. Mafalda N.S. Miranda; Victor Pimentel; Perpetua Gomes; Maria do Rosário Oliveira Martins; Sofia G. Seabra; Rolf Kaiser; Michael Böhm; et al. "The Role of Late Presenters in HIV-1 Transmission Clusters in Europe". Viruses (2023): https://www.mdpi.com/1999-4915/15/12/2418.
    10.3390/v15122418
  5. Franziska Hufsky; Ana B. Abecasis; Artem Babaian; Sebastian Beck; Liam Brierley; Simon Dellicour; Christian Eggeling; et al. "The International Virus Bioinformatics Meeting 2023". Viruses (2023): https://doi.org/10.3390/v15102031.
    10.3390/v15102031
  6. leonid Joaquim; Mafalda N. S. Miranda; Victor Pimentel; Maria do Rosário Oliveira Martins; Tacilta Nhampossa; Abecasis AB; Marta Sofia Pereira Pingarilho. "Retention in Care and Virological Failure among Adult HIV-Positive Patients on First-Line Antiretroviral Treatment in Maputo, Mozambique". Viruses 15 10 (2023): 1978-1978. http://dx.doi.org/10.3390/v15101978.
    10.3390/v15101978
  7. Martin Pirkl; Joachim Büch; Carole Devaux; Michael Böhm; Anders Sönnerborg; Francesca Incardona; Ana Abecasis; et al. "Analysis of mutational history of multidrug-resistant genotypes with a mutagenetic tree model". Journal of Medical Virology (2023): https://doi.org/10.1002/jmv.28389.
    10.1002/jmv.28389
  8. Raimondi, S.; Gandini, S.; Rubio Quintanares, G.H.; Abecasis, A.; Lopalco, P.L.; D’Ecclesiis, O.; Chiocca, S.; et al. "European Cohorts of patients and schools to Advance Response to Epidemics (EuCARE): a cluster randomised interventional and observational study protocol to investigate the relationship between schools and SARS-CoV-2 infection". BMC Infectious Diseases 23 1 (2023): http://www.scopus.com/inward/record.url?eid=2-s2.0-85145429805&partnerID=MN8TOARS.
    10.1186/s12879-022-07947-6
  9. Zélia Muggli; Thierry Mertens; Regina Amado; Ana Lúcia Teixeira; Dora Vaz; Melanie Pires; Helena Loureiro; et al. "Cohort profile: Health trajectories of Immigrant Children (CRIAS)–a prospective cohort study in the metropolitan area of Lisbon, Portugal". BMJ Open (2022): https://doi.org/10.1136/bmjopen-2022-061919.
    10.1136/bmjopen-2022-061919
  10. Franziska Hufsky; Ana Abecasis; Patricia Agudelo-Romero; Magda Bletsa; Katherine Brown; Claudia Claus; Stefanie Deinhardt-Emmer; et al. "Women in the European Virus Bioinformatics Center". Viruses (2022): https://doi.org/10.3390/v14071522.
    10.3390/v14071522
  11. Soo-Yon Rhee; Michael Boehm; Olga Tarasova; Giulia Di Teodoro; Ana B. Abecasis; Anders Sönnerborg; Alexander J. Bailey; et al. "Spectrum of Atazanavir-Selected Protease Inhibitor-Resistance Mutations". Pathogens 11 5 (2022): 546-546. https://doi.org/10.3390/pathogens11050546.
    10.3390/pathogens11050546
  12. Jeremias Salomão Chone; Ana Barroso Abecasis; Luís Varandas. "Determinants of Late HIV Presentation at Ndlavela Health Center in Mozambique". International Journal of Environmental Research and Public Health 19 8 (2022): 4568-4568. https://doi.org/10.3390/ijerph19084568.
    10.3390/ijerph19084568
  13. Pingarilho, M.; Pimentel, V.; Miranda, M.N.S.; Silva, A.R.; Diniz, A.; Ascenção, B.B.; Piñeiro, C.; et al. "HIV-1-Transmitted Drug Resistance and Transmission Clusters in Newly Diagnosed Patients in Portugal Between 2014 and 2019". Frontiers in Microbiology 13 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85131860855&partnerID=MN8TOARS.
    10.3389/fmicb.2022.823208
  14. Seabra, S.G.; Libin, P.J.K.; Theys, K.; Zhukova, A.; Potter, B.I.; Nebenzahl-Guimaraes, H.; Gorbalenya, A.E.; et al. "Genome-wide diversity of Zika virus: Exploring spatio-temporal dynamics to guide a new nomenclature proposal". Virus Evolution 8 1 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85130407173&partnerID=MN8TOARS.
    10.1093/ve/veac029
  15. Pimentel, V.F.; Pingarilho, M.; Sole, G.; Alves, D.; Miranda, M.; Diogo, I.; Fernandes, S.; et al. "Differential patterns of postmigration HIV-1 infection acquisition among Portuguese immigrants of different geographical origins". AIDS 36 7 (2022): 997-1005. http://www.scopus.com/inward/record.url?eid=2-s2.0-85131270384&partnerID=MN8TOARS.
    10.1097/QAD.0000000000003203
  16. O. Martins, M.R.; Shaaban, A.N.; Abecasis, A.; Muggli, Z.; Amado, R.; Vaz, D.; Dias, S.S.; Silva, A.C.; Fronteira, I.. "Are immigrants more vulnerable to the socioeconomic impact of COVID-19? A cross-sectional study in Amadora Municipality, Lisbon metropolitan area". Frontiers in Public Health 10 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85136032387&partnerID=MN8TOARS.
    10.3389/fpubh.2022.920308
  17. Miranda, M.N.S.; Pingarilho, M.; Pimentel, V.; Martins, M.D.R.O.; Kaiser, R.; Seguin-Devaux, C.; Paredes, R.; et al. "Trends of Transmitted and Acquired Drug Resistance in Europe From 1981 to 2019: A Comparison Between the Populations of Late Presenters and Non-late Presenters". Frontiers in Microbiology 13 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85128815736&partnerID=MN8TOARS.
    10.3389/fmicb.2022.846943
  18. Miranda, M.N.S.; Pingarilho, M.; Pimentel, V.; Torneri, A.; Seabra, S.G.; Libin, P.J.K.; Abecasis, A.B.. "A Tale of Three Recent Pandemics: Influenza, HIV and SARS-CoV-2". Frontiers in Microbiology 13 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85132806698&partnerID=MN8TOARS.
    10.3389/fmicb.2022.889643
  19. Morais, P.; Trovão, N.S.; Abecasis, A.B.; Parreira, R.. "Insect-specific viruses in the Parvoviridae family: Genetic lineage characterization and spatiotemporal dynamics of the recently established Brevihamaparvovirus genus". Virus Research 313 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85126379710&partnerID=MN8TOARS.
    10.1016/j.virusres.2022.198728
  20. Morais, P.; Trovão, N.S.; Abecasis, A.B.; Parreira, R.. "Readdressing the genetic diversity and taxonomy of the Mesoniviridae family, as well as its relationships with other nidoviruses and putative mesonivirus-like viral sequences". Virus Research 313 (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85126341897&partnerID=MN8TOARS.
    10.1016/j.virusres.2022.198727
  21. Rossetti, B.; Fabbiani, M.; Di Carlo, D.; Incardona, F.; Abecasis, A.; Gomes, P.; Geretti, A.M.; et al. "Effectiveness of integrase strand transfer inhibitors in HIV-infected treatment-experienced individuals across Europe". HIV Medicine 23 7 (2022): 774-789. http://www.scopus.com/inward/record.url?eid=2-s2.0-85133756731&partnerID=MN8TOARS.
    10.1111/hiv.13262
  22. Marcelino, R.; Ezeonwumelu, I.J.; Janeiro, A.; Mimoso, P.; Matos, S.; Briz, V.; Pimentel, V.; et al. Autor correspondente: Marcelino, Rute. "Phylogeography of hepatitis B virus: The role of Portugal in the early dissemination of HBV worldwide". PLoS ONE 17 12 Decembe (2022): http://www.scopus.com/inward/record.url?eid=2-s2.0-85144529444&partnerID=MN8TOARS.
    10.1371/journal.pone.0276618
  23. Tavares, A.M.; Pingarilho, M.; Batista, J.; Viveiros, M.; DIas, S.; Toscano, C.; Gomes, P.; Abecasis, A.B.. "Short Communication: HIV and Tuberculosis Co-Infection among Migrants in Portugal: A Brief Study on Their Sociodemographic, Clinical, and Genomic Characteristics". AIDS Research and Human Retroviruses 37 1 (2021): 34-37. http://www.scopus.com/inward/record.url?eid=2-s2.0-85099119194&partnerID=MN8TOARS.
    10.1089/aid.2020.0119
  24. Rossetti, B.; Fabbiani, M.; Di Carlo, D.; Incardona, F.; Abecasis, A.; Gomes, P.; Geretti, A.M.; et al. "Effectiveness of integrase strand transfer inhibitor-based regimens in HIV-infected treatment-naive individuals: Results from a European multi-cohort study". Journal of Antimicrobial Chemotherapy 76 9 (2021): 2394-2399. http://www.scopus.com/inward/record.url?eid=2-s2.0-85114380094&partnerID=MN8TOARS.
    10.1093/jac/dkab200
  25. Morais, P.; Trovão, N.S.; Abecasis, A.B.; Parreira, R.. "Genetic lineage characterization and spatiotemporal dynamics of classical insect-specific flaviviruses: outcomes and limitations". Virus Research 303 (2021): http://www.scopus.com/inward/record.url?eid=2-s2.0-85110732306&partnerID=MN8TOARS.
    10.1016/j.virusres.2021.198507
  26. Pimentel, V.; Pingarilho, M.; Alves, D.; Diogo, I.; Fernandes, S.; Miranda, M.; Pineda-Peña, A.-C.; et al. "Molecular epidemiology of hiv-1 infected migrants followed up in Portugal: Trends between 2001-2017". Viruses 12 3 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85080989468&partnerID=MN8TOARS.
    10.3390/v12030268
  27. Mavian, C.; Pond, S.K.; Marini, S.; Magalis, B.R.; Vandamme, A.-M.; Dellicour, S.; Scarpino, S.V.; et al. "Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable". Proceedings of the National Academy of Sciences of the United States of America 117 23 (2020): 12522-12523. http://www.scopus.com/inward/record.url?eid=2-s2.0-85085037581&partnerID=MN8TOARS.
    10.1073/pnas.2007295117
  28. Araújo, Pedro M. M.; Carvalho, Alexandre; Pingarilho, Marta; Abecasis, Ana B.; Osório, Nuno S.; Rodrigues, Fernando; BEST-HOPE study group. "Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries". (2019): http://hdl.handle.net/1822/62276.
    10.1038/s41598-019-43420-2
  29. Salgueiro, P.; Serrano, C.; Gomes, B.; Alves, J.; Sousa, C.A.; Abecasis, A.; Pinto, J.. "Phylogeography and invasion history of Aedes aegypti, the Dengue and Zika mosquito vector in Cape Verde islands (West Africa)". Evolutionary Applications 12 9 (2019): 1797-1811. http://www.scopus.com/inward/record.url?eid=2-s2.0-85074001799&partnerID=MN8TOARS.
    10.1111/eva.12834
  30. Tavares, A.M.; Garcia, A.C.; Gama, A.; Abecasis, A.B.; Viveiros, M.; Dias, S.. "Tuberculosis care for migrant patients in Portugal: A mixed methods study with primary healthcare providers". BMC Health Services Research 19 1 (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85064502659&partnerID=MN8TOARS.
    10.1186/s12913-019-4050-0
  31. Pimentel, V.; Afonso, R.; Nunes, M.; Vieira, M.L.; Bravo-Barriga, D.; Frontera, E.; Martinez, M.; et al. "Geographic dispersal and genetic diversity of tick-borne phleboviruses (Phenuiviridae, Phlebovirus) as revealed by the analysis of L segment sequences". Ticks and Tick-borne Diseases 10 4 (2019): 942-948. http://www.scopus.com/inward/record.url?eid=2-s2.0-85065162878&partnerID=MN8TOARS.
    10.1016/j.ttbdis.2019.05.001
  32. Vasylyeva, T.I.; Du Plessis, L.; Pineda-Peña, A.C.; Kühnert, D.; Lemey, P.; Vandamme, A.-M.; Gomes, P.; et al. "Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology". Journal of Infectious Diseases 220 2 (2019): 233-243. http://www.scopus.com/inward/record.url?eid=2-s2.0-85068468380&partnerID=MN8TOARS.
    10.1093/infdis/jiz085
  33. Pineda-Peña, A.-C.; Pingarilho, M.; Li, G.; Vrancken, B.; Libin, P.; Gomes, P.; Camacho, R.J.; et al. "Drivers of HIV-1 transmission: The Portuguese case". PLoS ONE 14 9 (2019): 846-851. http://www.scopus.com/inward/record.url?eid=2-s2.0-85072733890&partnerID=MN8TOARS.
    10.1371/journal.pone.0218226
  34. Theys, K.; Libin, P.J.K.; Van Laethem, K.; Abecasis, A.B.; Libin, P.; Laethem, K.V.. "An evolutionary model-based approach to quantify the genetic barrier to drug resistance in fast-evolving viruses and its application to HIV-1 subtypes and integrase inhibitors". Antimicrobial Agents and Chemotherapy 63 8 (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85070661355&partnerID=MN8TOARS.
    10.1128/AAC.00539-19
  35. Libin, P.J.K.; Deforche, K.; Abecasis, A.B.; Theys, K.; Libin, P.. "VIRULIGN: Fast codon-correct alignment and annotation of viral genomes". Bioinformatics 35 10 (2019): 1763-1765. http://www.scopus.com/inward/record.url?eid=2-s2.0-85066061303&partnerID=MN8TOARS.
    10.1093/bioinformatics/bty851
  36. Fonseca, V.; Libin, P.J.K.; Theys, K.; Faria, N.R.; Nunes, M.R.T.; Restovic, M.I.; Freire, M.; et al. "A computational method for the identification of dengue, zika and chikungunya virus species and genotypes". PLoS Neglected Tropical Diseases 13 5 (2019): http://www.scopus.com/inward/record.url?eid=2-s2.0-85066456449&partnerID=MN8TOARS.
    10.1371/journal.pntd.0007231
  37. A. Tavares; A. Garcia; Abecasis AB; Miguel Viveiros; Sónia Dias. "Perspectives of health care providers in Portugal on the provision of care to migrant patients with TB or HIV-TB co-infection". European Journal of Public Health 28 (2018): 161-161. https://unl.elsevierpure.com/en/publications/88ef6e8e-51ed-4d48-a721-1c0950454fa7.
    doi.org/10.1093/eurpub/cky048.151
  38. Theys, K.; Libin, P.; Pineda-Peña, A.-C.; Nowé, A.; Vandamme, A.-M.; Abecasis, A.B.; Pineda-Pena, A.-C.; Nowe, A.. "The impact of HIV-1 within-host evolution on transmission dynamics". Current Opinion in Virology 28 (2018): 92-101. http://www.scopus.com/inward/record.url?eid=2-s2.0-85038847406&partnerID=MN8TOARS.
    10.1016/j.coviro.2017.12.001
  39. Correia, Vanessa; Abecasis, Ana B.; Rebelo-de-Andrade, Helena. "Molecular footprints of selective pressure in the neuraminidase gene of currently circulating human influenza subtypes and lineages". (2018): http://hdl.handle.net/10400.18/6324.
    10.1016/j.virol.2018.07.002
  40. Abecasis, Ana B.; Dias, Sónia; Marcelino, José Maria. "The contribution of Institute of Hygiene and Tropical Medicine for the knowledge of infection by the Human Immunodeficiency Virus". (2018): http://anaisihmt.com/index.php/ihmt/article/view/170.
  41. Ezeonwumelu, Ifeanyi; Bártolo, Inês; Martin, Francisco; Abecasis, Ana; Campos, Teresa; Romero-Severson, Ethan O.; Leitner, Thomas; Taveira, Nuno. "Accidental father-to-son HIV-1 transmission during the seroconversion period". (2018): http://hdl.handle.net/10400.26/30475.
    10.1089/aid.2018.0060
  42. Grant, J.C.; González-Beiras, C.; Amick, K.M.; Fortney, K.R.; Gangaiah, D.; Humphreys, T.L.; Mitjà, O.; Abecasis, A.; Spinola, S.M.. "Multiple Class i and Class II Haemophilus ducreyi Strains Cause Cutaneous Ulcers in Children on an Endemic Island". Clinical Infectious Diseases 67 11 (2018): 1729-1735. http://www.scopus.com/inward/record.url?eid=2-s2.0-85056534257&partnerID=MN8TOARS.
    10.1093/cid/ciy343
  43. Pineda-Peña, A.-C.; Theys, K.; Stylianou, D.C.; Demetriades, I.; Puchhammer, E.; Vandamme, A.-M.; Aleksiev, I.; et al. "HIV-1 Infection in Cyprus, the Eastern Mediterranean European Frontier: A Densely Sampled Transmission Dynamics Analysis from 1986 to 2012". Scientific Reports 8 1 (2018): http://www.scopus.com/inward/record.url?eid=2-s2.0-85041118980&partnerID=MN8TOARS.
    10.1038/s41598-017-19080-5
  44. Abecasis, A.B.; Pingarilho, M.; Vandamme, A.-M.. "Phylogenetic analysis as a forensic tool in HIV transmission investigations". AIDS 32 5 (2018): 543-554. http://www.scopus.com/inward/record.url?eid=2-s2.0-85044174137&partnerID=MN8TOARS.
    10.1097/QAD.0000000000001728
  45. Theys, K.; Libin, P.; Dallmeier, K.; Pineda-Peña, A.-C.; Vandamme, A.-M.; Cuypers, L.; Abecasis, A.B.; et al. "Zika genomics urgently need standardized and curated reference sequences". PLoS Pathogens 13 9 (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85030462537&partnerID=MN8TOARS.
    10.1371/journal.ppat.1006528
  46. Gama, A.; Abecasis, A.; Pingarilho, M.; Mendão, L.; Martins, M.O.; Barros, H.; Dias, S.. "Cruising Venues as a Context for HIV Risky Behavior Among Men Who Have Sex With Men". Archives of Sexual Behavior 46 4 (2017): 1061-1068. http://www.scopus.com/inward/record.url?eid=2-s2.0-84961214699&partnerID=MN8TOARS.
    10.1007/s10508-016-0707-5
  47. Paraschiv, Simona; Banica, Leontina; Nicolae, Ionelia; Niculescu, Iulia; Abagiu, Adrian; Jipa, Raluca; Pineda-Peña, Andrea Clemencia; et al. "Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users". PLoS ONE 12 10 (2017): http://www.scopus.com/inward/record.url?scp=85031014330&partnerID=8YFLogxK.
    https://doi.org/10.1371/journal.pone.0185866
  48. Romero-Severson, Ethan O; Bulla, Ingo; Hengartner, Nick; Bártolo, Inês; Abecasis, Ana; Azevedo-Pereira, José M; Taveira, Nuno; et al. "Donor-Recipient Identification in Para- and Poly-phyletic Trees Under Alternative HIV-1 Transmission Hypotheses Using Approximate Bayesian Computation". Genetics 207 3 (2017): 1089-1101. http://hdl.handle.net/10362/36493.
    https://doi.org/10.1534/genetics.117.300284
  49. Tavares, Ana Maria; Fronteira, Inês; Couto, Isabel; Machado, Diana; Viveiros, Miguel; Abecasis, Ana B.; Dias, Sonia; et al. "HIV and tuberculosis co-infection among migrants in Europe: A systematic review on the prevalence, incidence and mortality". PloS one 12 9 (2017): http://hdl.handle.net/10362/36492.
    https://doi.org/10.1371/journal.pone.0185526
  50. de Carvalho Quintela, A.; Mineiro, A.C.; Cavilhas, J.; Abecasis, A.. "Solutions to improve flood discharge capacity under exceptional conditions - Corumana dam.". IN: TRANS. FIFTEENTH INT. CONGRESS ON LARGE DAMS, (LAUSANNE, SWITZERLAND: JUN. 24-28, 1985) 2 , Paris, (2017): 1189-1198. http://www.scopus.com/inward/record.url?eid=2-s2.0-0013731161&partnerID=MN8TOARS.
  51. Pineda-Peña, A.-C.; Varanda, J.; Sousa, J.D.; Theys, K.; Bártolo, I.; Leitner, T.; Taveira, N.; Vandamme, A.-M.; Abecasis, A.B.. "On the contribution of Angola to the initial spread of HIV-1". Infection, Genetics and Evolution 46 (2016): 219-222. http://www.scopus.com/inward/record.url?eid=2-s2.0-84996590196&partnerID=MN8TOARS.
    10.1016/j.meegid.2016.08.009
  52. Theys, K.; Van Laethem, K.; Gomes, P.; Baele, G.; Pineda-Peña, A.-C.; Vandamme, A.-M.; Camacho, R.J.; Abecasis, A.B.. "Sub-Epidemics Explain Localized High Prevalence of Reduced Susceptibility to Rilpivirine in Treatment-Naive HIV-1-Infected Patients: Subtype and Geographic Compartmentalization of Baseline Resistance Mutations". AIDS Research and Human Retroviruses 32 5 (2016): 427-433. http://www.scopus.com/inward/record.url?eid=2-s2.0-84966600896&partnerID=MN8TOARS.
    10.1089/aid.2015.0095
  53. Winand, R.; Theys, K.; Eusébio, M.; Aerts, J.; Camacho, R.J.; Gomes, P.; Suchard, M.A.; Vandamme, A.-M.; Abecasis, A.B.. "Erratum: Assessing transmissibility of HIV-1 drug resistance mutations from treated and from drug-naive individuals (AIDS (2015) 29 (2045-2052))". AIDS 30 4 (2016): 679-679. http://www.scopus.com/inward/record.url?eid=2-s2.0-84957649389&partnerID=MN8TOARS.
    10.1097/01.aids.0000480740.92924.2b
  54. Theys, K.; Abecasis, A.; Libin, P.; Gomes, P.; Cabanas, J.; Camacho, R.J.; Van Laethem, K.. "Discordant predictions of residual activity could impact dolutegravir prescription upon raltegravir failure". Journal of Clinical Virology 70 (2015): 120-127. http://www.scopus.com/inward/record.url?eid=2-s2.0-84939622757&partnerID=MN8TOARS.
    10.1016/j.jcv.2015.07.311
  55. Abecasis, A.B.; van Laethem, K.; Theys, K.. "Lack of evidence for the selection of E138 mutations by first-generation non-nucleoside reverse transcriptase inhibitors in patients infected with HIV-1 non-B subtypes". AIDS (London, England) 29 8 (2015): 987-988. http://www.scopus.com/inward/record.url?eid=2-s2.0-85003053084&partnerID=MN8TOARS.
    10.1097/QAD.0000000000000627
  56. Lunar, M.M.; Vandamme, A.-M.; Tomažic, J.; Karner, P.; Vovko, T.D.; Pecavar, B.; Volcanšek, G.; Poljak, M.; Abecasis, A.B.. "Bridging epidemiology with population genetics in a low incidence MSM-driven HIV-1 subtype B epidemic in Central Europe". BMC Infectious Diseases 15 1 (2015): http://www.scopus.com/inward/record.url?eid=2-s2.0-84924056658&partnerID=MN8TOARS.
    10.1186/s12879-015-0802-6
  57. Winand, R.; Theys, K.; Eusébio, M.; Aerts, J.; Camacho, R.J.; Gomes, P.; Suchard, M.A.; Vandamme, A.-M.; Abecasis, A.B.. "Assessing transmissibility of HIV-1 drug resistance mutations from treated and from drug-naive individuals". AIDS 29 15 (2015): 2045-2052. http://www.scopus.com/inward/record.url?eid=2-s2.0-84965066565&partnerID=MN8TOARS.
    10.1097/QAD.0000000000000811
  58. Carapeta, S.; do Bem, B.; McGuinness, J.; Esteves, A.; Abecasis, A.; Lopes, T.; de Matos, A.P.; et al. "Negeviruses found in multiple species of mosquitoes from southern Portugal: Isolation, genetic diversity, and replication in insect cell culture". Virology 483 (2015): 318-328. http://www.scopus.com/inward/record.url?eid=2-s2.0-84938149760&partnerID=MN8TOARS.
    10.1016/j.virol.2015.04.021
  59. Foster, G.M.; Ambrose, J.C.; Hué, S.; Delpech, V.C.; Fearnhill, E.; Abecasis, A.B.; Leigh Brown, A.J.; Geretti, A.M.. "Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: The identification and phylogeography of circulating recombinant form (CRF) 50-A1D". PLoS ONE 9 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84898603242&partnerID=MN8TOARS.
    10.1371/journal.pone.0083337
  60. Cavaco-Silva, J.; Abecasis, A.; Miranda, A.C.; Poças, J.; Narciso, J.; Águas, M.J.; Maltez, F.; et al. "HIV-2 integrase polymorphisms and longitudinal genotypic analysis of HIV-2 infected patients failing a raltegravir-containing regimen". PLoS ONE 9 3 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84899857420&partnerID=MN8TOARS.
    10.1371/journal.pone.0092747
  61. Frentz, D.; Van De Vijver, D.; Abecasis, A.; Albert, J.; Hamouda, O.; Jørgensen, L.; Kücherer, C.; et al. "Patterns of transmitted HIV drug resistance in Europe vary by risk group". PLoS ONE 9 4 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84899537490&partnerID=MN8TOARS.
    10.1371/journal.pone.0094495
  62. Frentz, D.; Van de Vijver, D.A.M.C.; Abecasis, A.B.; Albert, J.; Hamouda, O.; Jørgensen, L.B.; Ku¨cherer, C.; et al. "Increase in transmitted resistance to non-nucleoside reverse transcriptase inhibitors among newly diagnosed HIV-1 infections in Europe". BMC Infectious Diseases 14 1 (2014): http://www.scopus.com/inward/record.url?eid=2-s2.0-84904448066&partnerID=MN8TOARS.
    10.1186/1471-2334-14-407
  63. Abecasis AB; Sónia Dias; Marcelino, J.M.. "A contribuição do Instituto de Higiene e Medicina Tropical para o conhecimento da infeção pelo Vírus da Imunodeficiência Humana". Anais do Instituto de Higiene e Medicina Tropical 13 (2014): 37-45. https://novaresearch.unl.pt/en/publications/13aa27c7-345a-437e-8121-db95f256eff5.
    doi.org/10.25761/anaisihmt.170
  64. Abecasis AB; Miguel Viveiros; Leonard Amaral. "Activity of the efflux pump inhibitor SILA 421 against drug-resistant tuberculosis.". International Journal Of Antimicrobial Agents 41 5 (2013): 488-489. https://research.unl.pt/en/publications/activity-of-the-efflux-pump-inhibitor-sila-421-against-drugresistant-tuberculosis(45e829ee-e540-4800-bb87-d02985173041).html.
    10.1016/j.ijantimicag.2013.01.001
  65. Theys, K.; Snoeck, J.; Vercauteren, J.; Abecasis, A.B.; Vandamme, A.-M.; Camacho, R.J.; Mansinho, K.; et al. "Decreasing population selection rates of resistance mutation K65R over time in HIV-1 patients receiving combination therapy including tenofovir". Journal of Antimicrobial Chemotherapy 68 2 (2013): 419-423. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872396741&partnerID=MN8TOARS.
    10.1093/jac/dks380
  66. Lunar, M.M.; Židovec Lepej, S.; Abecasis, A.B.; Tomažic, J.; Vidmar, L.; Karner, P.; Vovko, T.D.; et al. "Short communication: Prevalence of HIV type 1 transmitted drug resistance in Slovenia: 2005-2010". AIDS Research and Human Retroviruses 29 2 (2013): 343-349. http://www.scopus.com/inward/record.url?eid=2-s2.0-84872950799&partnerID=MN8TOARS.
    10.1089/aid.2012.0152
  67. Abecasis, A.B.; Wensing, A.M.J.; Paraskevis, D.; Vercauteren, J.; Theys, K.; Van de Vijver, D.A.M.C.; Albert, J.; et al. "HIV-1 subtype distribution and its demographic determinants in newly diagnosed patients in Europe suggest highly compartmentalized epidemics". Retrovirology 10 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84872127915&partnerID=MN8TOARS.
    10.1186/1742-4690-10-7
  68. Bartha, I.; Assel, M.; Sloot, P.M.A.; Zazzi, M.; Torti, C.; Schülter, E.; Luca, A.D.; et al. "Superinfection with drug-resistant HIV is rare and does not contribute substantially to therapy failure in a large European cohort". BMC Infectious Diseases 13 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84887300453&partnerID=MN8TOARS.
    10.1186/1471-2334-13-537
  69. Ferreira, D.D.; Cook, S.; Lopes, A.; De Matos, A.P.; Esteves, A.; Abecasis, A.; De Almeida, A.P.G.; Piedade, J.; Parreira, R.. "Characterization of an insect-specific flavivirus (OCFVPT) co-isolated from Ochlerotatus caspius collected in southern Portugal along with a putative new Negev-like virus". Virus Genes 47 3 (2013): 532-545. http://www.scopus.com/inward/record.url?eid=2-s2.0-84890572152&partnerID=MN8TOARS.
    10.1007/s11262-013-0960-9
  70. Abecasis, A.B.; Serrano, M.; Alves, R.; Quintais, L.; Pereira-Leal, J.B.; Henriques, A.O.. "A genomic signature and the identification of new sporulation genes". Journal of Bacteriology 195 9 (2013): 2101-2115. http://www.scopus.com/inward/record.url?eid=2-s2.0-84876189467&partnerID=MN8TOARS.
    10.1128/JB.02110-12
  71. Frentz, D.; Wensing, A.M.J.; Albert, J.; Paraskevis, D.; Abecasis, A.B.; Hamouda, O.; Jørgensen, L.B.; et al. "Limited cross-border infections in patients newly diagnosed with HIV in Europe". Retrovirology 10 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84875650684&partnerID=MN8TOARS.
    10.1186/1742-4690-10-36
  72. Theys, K.; Abecasis, A.B.; Vandamme, A.-M.. "HIV-1 drug resistance: Where do polymorphisms fit in?". Future Microbiology 8 3 (2013): 303-306. http://www.scopus.com/inward/record.url?eid=2-s2.0-84874736183&partnerID=MN8TOARS.
    10.2217/fmb.13.10
  73. Pineda-Peña, A.-C.; Faria, N.R.; Imbrechts, S.; Libin, P.; Abecasis, A.B.; Deforche, K.; Gómez-López, A.; et al. "Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: Performance evaluation of the new REGA version 3 and seven other tools". Infection, Genetics and Evolution 19 (2013): 337-348. http://www.scopus.com/inward/record.url?eid=2-s2.0-84885191190&partnerID=MN8TOARS.
    10.1016/j.meegid.2013.04.032
  74. Soares, P.; Alves, R.J.; Abecasis, A.B.; Penha-Gonçalves, C.; Gomes, M.G.M.; Pereira-Leal, J.B.. "InTB - a data integration platform for molecular and clinical epidemiological analysis of tuberculosis". BMC Bioinformatics 14 1 (2013): http://www.scopus.com/inward/record.url?eid=2-s2.0-84883176636&partnerID=MN8TOARS.
    10.1186/1471-2105-14-264
  75. Faria, N.R.; Suchard, M.A.; Abecasis, A.; Sousa, J.D.; Ndembi, N.; Bonfim, I.; Camacho, R.J.; Vandamme, A.-M.; Lemey, P.. "Phylodynamics of the HIV-1 CRF02_AG clade in Cameroon". Infection, Genetics and Evolution 12 2 (2012): 453-460. http://www.scopus.com/inward/record.url?eid=2-s2.0-84857691271&partnerID=MN8TOARS.
    10.1016/j.meegid.2011.04.028
  76. Nunes, M.R.T.; Faria, N.R.; Vasconcelos, H.B.; Medeiros, D.B.A.; de Lima, C.P.S.; Carvalho, V.L.; da Silva, E.V.P.; et al. "Phylogeography of dengue virus serotype 4, Brazil, 2010-2011". Emerging Infectious Diseases 18 11 (2012): 1858-1864. http://www.scopus.com/inward/record.url?eid=2-s2.0-84867858511&partnerID=MN8TOARS.
    10.3201/eid1811.120217
  77. Case Western Reserve Univ; Universidade Federal do Rio de Janeiro (UFRJ); Hosp Egas Moniz; Universidade Federal de São Paulo (UNIFESP); Univ Rostock; Inst Nacl Canc; Santos, A.F.A.; et al. "Effect of Natural Polymorphisms in the HIV-1 CRF02_AG Protease on Protease Inhibitor Hypersusceptibility". Antimicrobial Agents and Chemotherapy 56 5 (2012): 2719-2725. http://repositorio.unifesp.br/handle/11600/34822.
    http://dx.doi.org/10.1128/AAC.06079-11
  78. Bártolo, I.; Abecasis, A.B.; Borrego, P.; Barroso, H.; McCutchan, F.; Gomes, P.; Camacho, R.; et al. "Origin and epidemiological history of HIV-1 CRF14_BG". PLoS ONE 6 9 (2011): http://www.scopus.com/inward/record.url?eid=2-s2.0-80053252119&partnerID=MN8TOARS.
    10.1371/journal.pone.0024130
  79. Abecasis, A.B.; Martins, A.; Costa, I.; Carvalho, A.P.; Diogo, I.; Gomes, P.; Camacho, R.J.. "Molecular epidemiological analysis of paired pol/env sequences from portuguese HIV type 1 patients". AIDS Research and Human Retroviruses 27 7 (2011): 803-805. http://www.scopus.com/inward/record.url?eid=2-s2.0-79959826851&partnerID=MN8TOARS.
    10.1089/aid.2010.0312
  80. Abecasis, A.B.; Geretti, A.M.; Albert, J.; Power, L.; Weait, M.; Vandamme, A.-M.. "Science in court: The myth of HIV fingerprinting". The Lancet Infectious Diseases 11 2 (2011): 78-79. http://www.scopus.com/inward/record.url?eid=2-s2.0-78751697974&partnerID=MN8TOARS.
    10.1016/S1473-3099(10)70283-8
  81. Abecasis, A.B.; Wang, Y.; Libin, P.; Imbrechts, S.; de Oliveira, T.; Camacho, R.J.; Vandamme Anne-Mieke, A.-M.. "Comparative performance of the REGA subtyping tool version 2 versus version 1". Infection, Genetics and Evolution 10 3 (2010): 380-385. http://www.scopus.com/inward/record.url?eid=2-s2.0-77951092096&partnerID=MN8TOARS.
    10.1016/j.meegid.2009.09.020
  82. Palma, A.C.; Abecasis, A.B.; Vercauteren, J.; Carvalho, A.P.; Cabanas, J.; Vandamme, A.-M.; Camacho, R.J.. "Effect of human immunodeficiency virus type 1 protease inhibitor therapy and subtype on development of resistance in subtypes B and G". Infection, Genetics and Evolution 10 3 (2010): 373-379. http://www.scopus.com/inward/record.url?eid=2-s2.0-77951094151&partnerID=MN8TOARS.
    10.1016/j.meegid.2009.06.019
  83. Abecasis, A.B.; Müller, V.. "Dynamics of transmitted HIV-1 drug resistance - The San Francisco model". AIDS Reviews 12 2 (2010): 122-123. http://www.scopus.com/inward/record.url?eid=2-s2.0-79955036034&partnerID=MN8TOARS.
  84. Abecasis, A.B.; Vandamme, A.-M.; Lemey, P.. "Quantifying differences in the tempo of human immunodeficiency virus type 1 subtype evolution". Journal of Virology 83 24 (2009): 12917-12924. http://www.scopus.com/inward/record.url?eid=2-s2.0-72849114288&partnerID=MN8TOARS.
    10.1128/JVI.01022-09
  85. Theys, K.; Vercauteren, J.; Abecasis, A.B.; Libin, P.; Deforche, K.; Vandamme, A.-M.; Camacho, R.. "The rise and fall of K65R in a Portuguese HIV-1 Drug Resistance database, despite continuously increasing use of tenofovir". Infection, Genetics and Evolution 9 4 (2009): 683-688. http://www.scopus.com/inward/record.url?eid=2-s2.0-68649109112&partnerID=MN8TOARS.
    10.1016/j.meegid.2008.10.013
  86. Santos, A.F.; Abecasis, A.B.; Vandamme, A.-M.; Camacho, R.J.; Soares, M.A.. "Discordant genotypic interpretation and phenotypic role of protease mutations in HIV-1 subtypes B and G". Journal of Antimicrobial Chemotherapy 63 3 (2009): 593-599. http://www.scopus.com/inward/record.url?eid=2-s2.0-60649120957&partnerID=MN8TOARS.
    10.1093/jac/dkn526
  87. Bartolo, Ines; Casanovas, Jose; Bastos, Rui; Rocha, Cheila; Abecasis, Ana B.; Folgosa, Elena; Mondlane, Jose; et al. "HIV-1 Genetic Diversity and Transmitted Drug Resistance in Health Care Settings in Maputo, Mozambique". Journal of Acquired Immune Deficiency Syndromes 51 3 (2009): 323-331. http://hdl.handle.net/10451/21663.
    10.1097/QAI.0b013e3181a24906
  88. Gonzalez, L.M.F.; Santos, A.F.; Abecasis, A.B.; Van Laethem, K.; Soares, E.A.; Deforche, K.; Tanuri, A.; et al. "Impact of HIV-1 protease mutations A71V/T and T74S on M89I/V-mediated protease inhibitor resistance in subtype G isolates". Journal of Antimicrobial Chemotherapy 61 6 (2008): 1201-1204. http://www.scopus.com/inward/record.url?eid=2-s2.0-44449118926&partnerID=MN8TOARS.
    10.1093/jac/dkn099
  89. Ho, Y.S.; Abecasis, A.B.; Theys, K.; Deforche, K.; Dwyer, D.E.; Charleston, M.; Vandamme, A.M.; Saksena, N.K.. "HIV-1 gp120 N-linked glycosylation differs between plasma and leukocyte compartments". Virology Journal 5 (2008): http://www.scopus.com/inward/record.url?eid=2-s2.0-40549095374&partnerID=MN8TOARS.
    10.1186/1743-422X-5-14
  90. Abecasis, A.B.; Lemey, P.; Vidal, N.; De Oliveira, T.; Peeters, M.; Camacho, R.; Shapiro, B.; Rambaut, A.; Vandamme, A.-M.. "Recombination confounds the early evolutionary history of human immunodeficiency virus type 1: Subtype G is a circulating recombinant form". Journal of Virology 81 16 (2007): 8543-8551. http://www.scopus.com/inward/record.url?eid=2-s2.0-34547761762&partnerID=MN8TOARS.
    10.1128/JVI.00463-07
  91. Gomes, P.; Palma, A.C.; Cabanas, J.; Abecasis, A.; Carvalho, A.P.; Ziermann, R.; Diogo, I.; et al. "Comparison of the COBAS TAQMAN™ HIV-1 HPS with VERSANT HIV-1 RNA 3.0 Assay (bDNA) for plasma RNA quantitation in different HIV-1 subtypes". Journal of Virological Methods 135 2 (2006): 223-228. http://www.scopus.com/inward/record.url?eid=2-s2.0-33745136396&partnerID=MN8TOARS.
    10.1016/j.jviromet.2006.03.018
  92. Abecasis, A.B.; Deforche, K.; Bacheler, L.T.; McKenna, P.; Carvalho, A.P.; Gomes, P.; Vandamme, A.-M.; Camacho, R.J.. "Investigation of baseline susceptibility to protease inhibitors in HIV-1 subtypes C, F, G and CRF02_AG". Antiviral Therapy 11 5 (2006): 581-589. http://www.scopus.com/inward/record.url?eid=2-s2.0-33747778089&partnerID=MN8TOARS.
  93. Paraskevis, D.; Deforche, K.; Abecasis, A.; Camacho, R.; Vandamme, A.-M.. "Analysis of complex HIV-1 intersubtype recombinants using a Bayesian scanning method". Infection, Genetics and Evolution 5 3 SPEC. IS (2005): 219-224. http://www.scopus.com/inward/record.url?eid=2-s2.0-14544301375&partnerID=MN8TOARS.
    10.1016/j.meegid.2004.07.006
  94. Abecasis, A.; Paraskevis, D.; Epalanga, M.; Fonseca, M.; Burity, F.; Bartolomeu, J.; Carvalho, A.P.; et al. "HIV-1 genetic variants circulation in the North of Angola". Infection, Genetics and Evolution 5 3 SPEC. IS (2005): 231-237. http://www.scopus.com/inward/record.url?eid=2-s2.0-20044396370&partnerID=MN8TOARS.
    10.1016/j.meegid.2004.07.007
  95. Abecasis, A.B.; Deforche, K.; Snoeck, J.; Bacheler, L.T.; McKenna, P.; Carvalho, A.P.; Gomes, P.; Camacho, R.J.; Vandamme, A.-M.. "Protease mutation M89I/V is linked to therapy failure in patients infected with the HIV-1 non-B subtypes C, F or G". AIDS 19 16 (2005): 1799-1806. http://www.scopus.com/inward/record.url?eid=2-s2.0-27544477733&partnerID=MN8TOARS.
  96. Gomes, P.; Abecasis, A.; Almeida, M.; Camacho, R.; Mansinho, K.. "Transmission of HIV-2". Lancet Infectious Diseases 3 11 (2003): 683-684. http://www.scopus.com/inward/record.url?eid=2-s2.0-0242355084&partnerID=MN8TOARS.
    10.1016/S1473-3099(03)00797-7
Capítulo de livro
  1. Pingarilho, Marta; Pimentel, Victor; Abecasis AB. "Combining clinical and sociobehavioral questionnaires with genomic data to better understand HIV transmission". In SAGE Research Methods Cases. SAGE, 2020.
Livro
  1. Libin, P.; Versbraegen, N.; Abecasis, A.B.; Gomes, P.; Lenaerts, T.; Nowé, A.. Towards a Phylogenetic Measure to Quantify HIV Incidence. 2020.
    10.1007/978-3-030-65154-1_3
Poster em conferência
  1. Pimentel, Victor; Pingarilho, Marta; Cruz Sebastião; Mafalda Miranda; Seabra, Sofia; GOMES, Perpetua; Abecasis, Ana. "Traansmissão do subtipo A de VIH-1 em Portugal: Aborgagens genéticas, clínicas e epidemiológicas.". Trabalho apresentado em 14ªs Jornadas de Atualização de Doenças Infeciosas do Hospital Curry Cabral (CHLC), 25 e 26 janeiro de 2024, 2024.
  2. Pingarilho, Marta; Pimentel, Victor; Miranda, Mafalda; Seabra, Sofia; GOMES, Perpetua; Abecasis A. "Construção de uma base de dados sociodemográficos, clínicos e genómicos para estudar a epidemia do VIH em Portugal.". Trabalho apresentado em 14ªs Jornadas de Atualização de Doenças Infeciosas do Hospital Curry Cabral (CHLC), 25 e 26 janeiro de 2024, 2024.
  3. Pimentel, Victor; Pingarilho, Marta; Cruz Sebastião; Mafalda Miranda; Seabra, Sofia; GOMES, Perpetua; Abecasis, Ana. "Transmissão do subtipo A de VIH-1 em Portugal: Aborgagens genéticas, clínicas e epidemiológicas.". Trabalho apresentado em 14ªs Jornadas de Atualização de Doenças Infeciosas do Hospital Curry Cabral (CHLC), 25 e 26 janeiro de 2024, 2024.
  4. Sofia G. Seabra; Pimentel, Victor; Da Moura, Aires; Tomaz, Filipe; Seixas, Gonçalo; Miranda, Mafalda; Ana Gonçalves Domingos; et al. "Towards a simple and cost-effective protocol for viral surveillance in wastewaters". Trabalho apresentado em Microbiotec23, 2023.
  5. Sofia G. Seabra; Mónica Nunes; André F. Santos; Victor Pimentel; Aires Moura; Filipe Tomaz; Seixas G.; et al. "Viral surveillance in wastewaters". 2023.
  6. André F. Santos; Mónica Nunes; Andreia Silva; Teresa Crespo; Victor Pimentel; Marta Sofia Pereira Pingarilho; Mafalda Miranda; et al. "Viral detection in wastewaters". 2023.
  7. Sofia G. Seabra; Pimentel, Victor; Tomaz, Filipe; Seixas, Gonçalo; Ana Gonçalves Domingos; Pingarilho, Marta; Abecasis, Ana; Parreira, Ricardo. "Viral surveillance in wastewaters: improving sample processing steps and bioinformatic protocols". Trabalho apresentado em 2nd Egas Moniz One Health Symposium, 2023.
  8. Pimentel, Victor; Pingarilho, Marta; Cruz Sebastião; Barbosa, Ana Mafalda Castanheira Neves de Miranda; Seabra S.; Fatima Gonçalves; Fernandes, Sandra; et al. Autor correspondente: Pimentel, Victor. "Low Prevalence of Resistance Mutations Associated With Integrase Inhibitors as Detected by Sanger and Next Generation Sequencing Among HIV-1 Patients Followed Up in Portugal.". Trabalho apresentado em 21st European Meeting on HIV & Hepatitis. 7-9 June 2023. Rome. Italy., 2023.
  9. Pingarilho, Marta; Barbosa, Ana Mafalda Castanheira Neves de Miranda; Graça J.; Pimentel, Victor; et all; Gomes P.; Abecasis, Ana; on behalf of the BESTHOPE study group.. Autor correspondente: Pingarilho, Marta. "Sociodemographic, Clinical, and Behavioral Factors Associated With STIs Among HIV-1 Positive Migrants in Portugal: Are There Differences Between Sex?". Trabalho apresentado em 21st European Meeting on HIV & Hepatitis. 7-9 June 2023. Rome. Italy., 2023.
  10. Sofia G. Seabra; Mónica Nunes; Andreia Silva; Teresa Crespo; Victor Pimentel; Marta Sofia Pereira Pingarilho; Pieter Libin; Abecasis AB; Ricardo Parreira. "Virome approach to pathogen surveillance of wastewaters". 2023.
  11. Mendes, Vítor; Maria Rosario O. Martins; Abecasis, Ana. "Carga Global de Cardiopatias Congénitas em Neonatos (0-1 ano), de 1990 a 2019". Trabalho apresentado em XII Jornadas Científicas do IHMT, 2022.
  12. Diana F Santos; Santos AB; Abecasis AB; Sousa AE. "Quantification of viral mRNA in lymph nodes from HIV- 2 or HIV-1 infected individuals using RNAscope in situ hybridization". Trabalho apresentado em XLVII Annual Meeting SPI, 2022.
  13. Silvania Leal; Pimentel, Victor; Pingarilho, Marta; Gonçalves, Paloma; Nuno Eduardo Moura dos Santos da Costa Taveira; Isabel Araújo; Parreira, Ricardo; Abecasis, Ana. "High prevalence of K103N in newly diagnosed HIV-1 patients from Cabo Verde suggests that NNRTIs should be withdrawn from first-line ARV regimens". Trabalho apresentado em XII Jornadas Científicas do IHMT, 2021.
  14. Marcelino, Rute; Ezeonwumelu, Ifeanyi Jude; Janeiro, André; Mimoso, Paula; Matos, Sónia; Briz, Verónica; Pimentel, Victor; et al. "Epidemiological History of Hepatitis B Virus in Portugal and the Portuguese Role in Its Spreading Across the World". Trabalho apresentado em International AIDS Society Conference (IAS), 2021.
  15. Sofia G. Seabra; Kristof Theys; Pieter Libin; Anna Zhukova; Barney I Potter; Hanna Nebenzahl-Guimaraes; Alexander E Gorbalenya; et al. "Geographic dispersion of Zika virus: a phylodynamic approach". 2021.
  16. Correia, Vanessa; Santos, Luís A.; Trigueiro-Louro, João; Abecasis, Ana; Rebelo-de-Andrade, Helena. "Victoria and Yamagata: Exploiting lineage-specificity of influenza B virus neuraminidase inhibitor natural susceptibility and selective pressure strength at resistance-associated sites". Trabalho apresentado em OPTIONS X for the Control of Influenza, 2019.
  17. Pimentel, Victor; Pingarilho M; Abecasis AB. "Prevalence of Protease drug resistance in naïve and pretreated HIV-1 infected worldwide population between 1986 and 2017". Trabalho apresentado em 16th European HIV and Hepatitis, June 2019, Rome, Italy., 2019.
  18. Machado, Diana; Perdigão, João; Ramos, Jorge; Tavares, Ana Maria; Abecasis, Ana; Dias, Sonia; Clark, Taane G.; et al. "Molecular epidemiology of antibiotic resistance genes in multi- and extensively drug-resistant Mycobacterium tuberculosis in Lisbon and its correlation with drug resistance levels". Trabalho apresentado em NOVAsaude IV Genetics Workshop, 2019.
  19. Pingarilho, Marta; Pimentel, Victor; Libin, Pieter; Miranda, Mafalda; Gomes, P; Camacho RJ; Abecasis AB; on behalf of the Portuguese HIV-1 Resistance Study Group.. "Vigilância da resistência primária e adquirida aos inibidores de protease em doentes drug-naïve e tratados em Portugal.". Trabalho apresentado em 11as Jornadas de Atualização em Doenças Infeciosas do Hospital Curry Cabral. Jan 2018., 2018.
  20. Pingarilho, Marta; Pineda-Peña; Pimentel, Victor; A. C., Gomes, P; Libin, P; Theys, Kristof; Martins, M.R.O.; et al. "MigrantHIV- Padrões de transmissão de resistência ao VIH na população imigrante em Portugal.". Trabalho apresentado em Congresso de Pandemias na Era da Globalização, 2017.
  21. Pimentel, Victor; Portes L; Romero G; Abecasis AB; Brígido LFM. "HIV-1 Subtypes B Transmission Networks among newly diagnosed MSM population from Sao Paulo city". Trabalho apresentado em 9th IAS Conference on HIV Science (IAS 2017)., 2017.
  22. Pingarilho M; Pineda-Peña AC; Dias, Sonia; Pimentel, Victor; Libin, P; Theys K; Martins MRO; et al. "BEST HOPE - Cohort of HIV newly diagnosed patients in Portugal.". Trabalho apresentado em 21st International Workshop on HIV and Hepatitis Observational Databases., 2017.
  23. Pimentel, Victor; Pineda-Peña A-C; Pingarilho M; Portes L; Alves, Daniela; Matsuda EM; Harsi CM; et al. "HIV-1 Subtypes B, C and F1 Transmission Networks in Sao Paulo State according to Risk Factor.". Trabalho apresentado em 21th International Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME), 2016.
  24. Pimentel, Victor; Abecasis AB; Portes L; Pineda-Peña AC; Matsuda EM; Guimarães PMS; Harsi CM; et al. "High frequency of TDR in newly diagnosed HIV-1 patients from São Paulo/Brazil.". Trabalho apresentado em 20th International Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME)., 2015.
Pré-impressão
  1. Cruz Sebastião; Carlos Rafael; Victor Pimentel; Ana Abecasis; Joana Morais. "Adherence to Antiretroviral Therapy (ART) Among HIV-1 Patients From Sub-Saharan Africa: A Systematic Review". 2024. https://doi.org/10.20944/preprints202404.1615.v1.
    10.20944/preprints202404.1615.v1
  2. Pedro Almeida; Carlos Rafael; Victor Pimentel; Ana Abecasis; Cruz Sebastião; Joana Morais. "Adherence to Antiretroviral Therapy (ART) Among HIV-1 Patients From Sub-Saharan Africa: A Systematic Review". 2024. https://doi.org/10.20944/preprints202404.1615.v2.
    10.20944/preprints202404.1615.v2
  3. Nuno Taveira; Paloma Gonçalves; Jorge Barreto; Menilita Santos; Silvania Leal; José Marcelino; Ana Abecasis; et al. "HIV-1 drug resistance and genetic diversity in people with HIV-1 in Cape Verde, 2019-2021". 2023. https://doi.org/10.22541/au.169631469.96124050/v1.
    10.22541/au.169631469.96124050/v1
Resumo em conferência
  1. Gonçalves, Paloma; Silvania Leal; Vitor Pimentel; Pingarilho, Marta; Moranguinho, Inês; Menilita Santos; Palladino, Claudia; et al. "Characterization of HIV-1 and HIV-2 genetic diversity and drug resistance profile in infected patients from Cape Verde". Trabalho apresentado em ASM Microbe 22, Washington, D.C., 2022.
    Aceite para publicação
  2. Sofia G. Seabra; Pieter J.K. Libin; Kristof Theys; Anna Zhukova; Barney I. Potter; Hanna Nebenzahl-Guimaraes; Alexander E. Gorbalenya; et al. "Viral genomic surveillance: phylodynamic analysis of Zika virus and proposal of a nomenclature system". 2022.
  3. Sofia G. Seabra; Kristof Theys; Pieter J.K. Libin; Anna Zhukova; Barney I. Potter; Hanna Nebenzahl-Guimaraes; Alexander E. Gorbalenya; et al. "Molecular epidemiology of Zika virus: a worldwide characterization". 2021.
  4. Diana Machado; João Perdigão; Jorge Ramos; Ana Tavares; Abecasis AB; Sónia Dias; Taane G. Clark; et al. "Exploring the phenotypic and genetic basis of drug-resistant Mycobacterium tuberculosis strains in Lisbon, Portugal". 2019.
  5. Diana Machado; João Perdigão; Jorge Ramos; Ana Tavares; Abecasis AB; Sónia Dias; Taane Clark; et al. "Epidemiologia molecular da resistência em Mycobacterium tuberculosis multirresistente em Lisboa". 2019.
Tese / Dissertação
  1. MOIANE, Jorge José. "Taxa de abandono do tratamento antirretroviral (TARV) e seus fatores associados em pacientes adultos inscritos no centro de saúde de Namacurra - sede, no periodo de 1 de janeiro 2015 a 31 de dezembro 2016, na província da Zambézia, em Moçambique". Mestrado, 2018. http://hdl.handle.net/10362/66167.
  2. Abecasis, Ana Barroso. "Relatório estágio profissional". Mestrado, 2014. http://hdl.handle.net/10362/17404.

Outros

Outra produção
  1. Socioeconomic impact of COVID-19 among immigrants in Lisbon Region. 2021. A. Shaaban; Abecasis AB; Ines Fronteira; Zélia Muggli; Regina Amado; Dora Vaz; A. C. Silva; Maria do Rosário Oliveira Martins. https://novaresearch.unl.pt/en/publications/e680bfa1-af05-4e61-b215-56f54c88fa70.
    https://doi.org/10.1111/tmi.13632
  2. An updated genotype classification system for Zika viruses. 2019. Nebenzahl-Guimaraes, H.; Libin, P.; Pimentel, V.; Pingarilho, M.; Theys, K.; Abecasis, A.B.. http://www.scopus.com/inward/record.url?eid=2-s2.0-85095661938&partnerID=MN8TOARS.
    10.1101/760066
  3. An insight into the spatial dynamics of HIV-2 from patients in Portuguese hospitals.. 2010. Perpétua Gomes; Abecasis AB; Celso Cunha. https://novaresearch.unl.pt/en/publications/d8f7aec0-0b34-401d-a1db-54c248fd69c0.
Atividades

Orientação

Título / Tema
Papel desempenhado 		Curso (Tipo)
Instituição / Organização
2023 - 2023 Determinantes da adesão ao tratamento antirretroviral no par mãe e filho na província da Maputo, Moçambiquer
Orientador
 Saúde Internacional (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2023 - 2023 Vigilância genómica da Infeção VIH e resistência aos antirretrovirais em São Tomé e Príncipe e seus fatores clínicos, demográficos e sócio-comportamentais associadosTitulo a Digitar
Orientador
 Saúde Internacional (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2022 - 2022 Impacto de fatores nutricionais e metabólicos no desfecho da doença grave em infetados com SARS-CoV-2, internados em unidades de cuidados intensivos da região de Lisboa
Orientador
 Ciências Biomédicas (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2022 - 2022 Fatores clínicos associados à serologia positiva ou autoreporte de teste PCR positivo para SARS-CoV-2 na população de Cascais.
Orientador
 Saúde Pública e Desenvolvimento (Mestrado)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2022 - 2022 Práticas e comportamentos sexuais de imigrantes que vivem em Portugal.
Orientador
 Saúde Pública e Desenvolvimento (Mestrado)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2021 - 2021 Evolução da Infeção por VIH na população de migrantes e não migrantes em seguimento no Hospital Garcia da Orta.
Orientador
 Saúde Pública e Desenvolvimento (Mestrado)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2021 - 2021 Caracterização Genética do Virus do sarampo Circulante em Angola no período de 2021 - 2022
Orientador
 Ciências Biomédicas (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2020 - 2020 Origem e Filogeografia do VIH-1 no arquipélago de São Tomé e Príncipe.
Orientador
 Saúde Pública e Desenvolvimento (Mestrado)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2020 - 2020 Avaliação da Resistência aos Antirretrovirais em pacientes infectados por HIV-1 em Cabo Verde
Orientador
 Ciências Biomédicas (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2020 - 2020 Dynamics of HIV - 1 transmission in Europe: a guidance for evidence-based prevention strategies
Orientador
 Saúde Pública Global (associação) (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2019 - 2019 Prevalência de malformações congénitas e fatores associados em São Tomé e Principe._ ALTERADO PARA_Prevalência de anomalias congénitas e de fatores de risco ambientais, biológicos e sociais associados em São Tomé e Príncipe
Orientador
 Saúde Internacional (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2018 - 2018 Determinantes de Sucesso Terapêutico nas crianças em tratamento Anti-retroviral: Um estudo longitudinal para a Província de Maputo, Moçambique.
Orientador
 Saúde Internacional (Doutoramento)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
2018 - 2018 Taxa de abandono do tratamento antirretroviral (TARV) e seus fatores associados em pacientes adultos inscritos no Centro de Saúde de Namacurra – Sede, no período de 1 de janeiro 2015 a 30 de dezembro 2016, na província da Zambézia, em Moçambique.
Orientador
 Estatística para a Saúde (Mestrado)
Universidade Nova de Lisboa Instituto de Higiene e Medicina Tropical, Portugal
Distinções

Outra distinção

2022 Nomeação Prémio Activa Mulheres Inspiradoras
Revista Activa, Portugal
2012 Medalha de Honra L'Óreal Portugal para as Mulheres na Ciência
Fondation L'Oréal, França