Artigo em revista |
- Solange Duruz; Natalia Sevane; Oliver Selmoni; Elia Vajana; Kevin Leempoel; Sylvie Stucki; Pablo Orozco-terWengel; et al.
"Rapid identification and interpretation of gene–environment associations using the new R.SamBada landscape genomics pipeline".
Molecular Ecology Resources 19 5 (2019): 1355-1365. https://doi.org/10.1111/1755-0998.13044.
10.1111/1755-0998.13044
- Ismo Strandén; Juha Kantanen; Isa-Rita M. Russo; Pablo Orozco-terWengel; Michael W. Bruford. "Genomic selection strategies
for breeding adaptation and production in dairy cattle under climate change". Heredity 123 3 (2019): 307-317. https://doi.org/10.1038/s41437-019-0207-1.
10.1038/s41437-019-0207-1
- Crottini; Orozco-terWengel; Rabemananjara; Hauswaldt; Vences. "Mitochondrial Introgression, Color Pattern Variation, and Severe
Demographic Bottlenecks in Three Species of Malagasy Poison Frogs, Genus Mantella". Genes (2019): https://doi.org/10.3390/genes10040317.
10.3390/genes10040317
- Daniel Pitt; Natalia Sevane; Ezequiel L. Nicolazzi; David E. MacHugh; Stephen D. E. Park; Licia Colli; Rodrigo Martinez; Michael
W. Bruford; Pablo Orozco-terWengel. "Domestication of cattle: Two or three events?". Evolutionary Applications 12 1
(2019): 123-136. https://doi.org/10.1111/eva.12674.
10.1111/eva.12674
- Daniel Pitt; Michael W. Bruford; Mario Barbato; Pablo Orozco-terWengel; Rodrigo Martínez; Natalia Sevane. "Demography and
rapid local adaptation shape Creole cattle genome diversity in the tropics". Evolutionary Applications 12 1 (2019):
105-122. https://doi.org/10.1111/eva.12641.
10.1111/eva.12641
- Orozco-terWengel, Pablo. "Long-term sky islands generate highly divergent lineages of a narrowly distributed stream salamander
(Pachyhynobius shangchengensis) in mid-latitude mountains of East Asia". BMC Evolutionary Biology 19 1 (2019): 1-1.
https://doi.org/10.1186/s12862-018-1333-8.
10.1186/s12862-018-1333-8
- Tamsyn M. Uren Webster; Deiene Rodriguez-Barreto; Samuel A.M. Martin; Cock Van Oosterhout; Pablo Orozco-terWengel; Joanne
Cable; Alastair Hamilton; Carlos Garcia De Leaniz; Sofia Consuegra. "Contrasting effects of acute and chronic stress on the
transcriptome, epigenome, and immune response of Atlantic salmon". Epigenetics 13 12 (2018): 1191-1207. https://doi.org/10.1080/15592294.2018.1554520.
10.1080/15592294.2018.1554520
- Florian J. Alberto; Frédéric Boyer; Pablo Orozco-terWengel; Ian Streeter; Bertrand Servin; Pierre de Villemereuil; Badr Benjelloun;
et al. "Convergent genomic signatures of domestication in sheep and goats". Nature Communications 9 1 (2018): https://doi.org/10.1038/s41467-018-03206-y.
10.1038/s41467-018-03206-y
- Juan C. Marín; Romina Rivera; Valeria Varas; Jorge Cortés; Ana Agapito; Ana Chero; Alexandra Chávez; Warren E. Johnson; Pablo
Orozco-terWengel. "Genetic Variation in Coat Colour Genes MC1R and ASIP Provides Insights Into Domestication and Management
of South American Camelids". Frontiers in Genetics 9 (2018): https://doi.org/10.3389%2Ffgene.2018.00487.
10.3389/fgene.2018.00487
- C. S. Casey; P. Orozco-terWengel; K. Yaya; M. Kadwell; M. Fernández; J. C. Marín; R. Rosadio; et al. "Comparing genetic diversity
and demographic history in co-distributed wild South American camelids". Heredity 121 4 (2018): 387-400. https://doi.org/10.1038/s41437-018-0120-z.
10.1038/s41437-018-0120-z
- Amy R Ellison; Tamsyn M Uren Webster; Olivier Rey; Carlos Garcia de Leaniz; Sofia Consuegra; Pablo Orozco-terWengel; Jo Cable.
"Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density". BMC
Genomics 19 1 (2018): https://doi.org/10.1186%2Fs12864-018-5098-7.
10.1186/s12864-018-5098-7
- Zhijin Liu; Xinxin Tan; Pablo Orozco-terWengel; Xuming Zhou; Liye Zhang; Shilin Tian; Zhongze Yan; et al. "Population genomics
of wild Chinese rhesus macaques reveals a dynamic demographic history and local adaptation, with implications for biomedical
research". GigaScience 7 9 (2018): https://doi.org/10.1093%2Fgigascience%2Fgiy106.
10.1093/gigascience/giy106
- Chloe Victoria Robinson; Carlos Garcia de Leaniz; Joanna James; Joanne Cable; Pablo Orozco-terWengel; Sofia Consuegra. "Genetic
diversity and parasite facilitated establishment of the invasive signal crayfish (Pacifastacus leniusculus) in Great Britain".
Ecology and Evolution 8 18 (2018): 9181-9191. https://doi.org/10.1002%2Fece3.4235.
10.1002/ece3.4235
- Orozco-terWengel, Pablo. "Lessons learnt on the analysis of large sequence data in animal genomics". Animal genetics
(2018): https://doi.org/10.1111/age.12655.
10.1111/age.12655
- Mario Barbato; Frank Hailer; Pablo Orozco-terWengel; James Kijas; Paolo Mereu; Pierangela Cabras; Raffaele Mazza; Monica Pirastru;
Michael W. Bruford. "Genomic signatures of adaptive introgression from European mouflon into domestic sheep". Scientific
Reports (2017):
10.1038/s41598-017-07382-7
- Nater A; Mattle-Greminger MP; Nurcahyo A; Nowak MG; de Manuel M; Desai T; Groves C; et al. "Morphometric, Behavioral, and
Genomic Evidence for a New Orangutan Species.". Current biology : CB (2017): http://europepmc.org/abstract/med/29103940.
10.1016/j.cub.2017.09.047
- Nater A; Mattle-Greminger MP; Nurcahyo A; Nowak MG; de Manuel M; Desai T; Groves C; et al. "Morphometric, Behavioral, and
Genomic Evidence for a New Orangutan Species.". Current biology : CB (2017): http://europepmc.org/abstract/med/29161551.
10.1016/j.cub.2017.11.020
- Stucki S; Orozco-terWengel P; Forester BR; Duruz S; Colli L; Masembe C; Negrini R; et al. "High performance computation of
landscape genomic models including local indicators of spatial association.". Molecular ecology resources (2017): http://europepmc.org/abstract/med/27801969.
10.1111/1755-0998.12629
- Valbuena-Ureña E; Soler-Membrives A; Steinfartz S; Orozco-terWengel P; Carranza S. "No signs of inbreeding despite long-term
isolation and habitat fragmentation in the critically endangered Montseny brook newt (Calotriton arnoldi).". Heredity
(2017): http://europepmc.org/abstract/med/28074844.
10.1038/hdy.2016.123
- Hudson MA; Young RP; Jackson JD; Orozco-terWengel P; Martin L; James A; Sulton M; et al. "Corrigendum: Dynamics and genetics
of a disease-driven species decline to near extinction: lessons for conservation.". Scientific reports (2017): http://europepmc.org/abstract/med/28074851.
10.1038/srep40110
- Leempoel, K.; Duruz, S.; Rochat, E.; Widmer, I.; Orozco-terWengel, P.; Joost, S.. "Simple rules for an efficient use of geographic
information systems in molecular ecology". Frontiers in Ecology and Evolution 5 APR (2017): http://www.scopus.com/inward/record.url?eid=2-s2.0-85031695851&partnerID=MN8TOARS.
10.3389/fevo.2017.00033
- Hudson MA; Young RP; D'Urban Jackson J; Orozco-terWengel P; Martin L; James A; Sulton M; et al. "Dynamics and genetics of
a disease-driven species decline to near extinction: lessons for conservation.". Scientific reports (2016): http://europepmc.org/abstract/med/27485994.
10.1038/srep30772
- Almathen F; Charruau P; Mohandesan E; Mwacharo JM; Orozco-terWengel P; Pitt D; Abdussamad AM; et al. "Ancient and modern DNA
reveal dynamics of domestication and cross-continental dispersal of the dromedary.". Proceedings of the National Academy
of Sciences of the United States of America (2016): http://europepmc.org/abstract/med/27162355.
10.1073/pnas.1519508113
- P Orozco-terWengel. "The devil is in the details: the effect of population structure on demographic inference". Heredity
116 4 (2016): 349-350. https://doi.org/10.1038/hdy.2016.9.
10.1038/hdy.2016.9
- Sherrard-Smith E; Stanton DW; Cable J; Orozco-terWengel P; Simpson VR; Elmeros M; van Dijk J; et al. "Distribution and molecular
phylogeny of biliary trematodes (Opisthorchiidae) infecting native Lutra lutra and alien Neovison vison across Europe.". Parasitology
international (2016): http://europepmc.org/abstract/med/26620805.
10.1016/j.parint.2015.11.007
- Liu Z; Liu G; Hailer F; Orozco-terWengel P; Tan X; Tian J; Yan Z; Zhang B; Li M. "Dietary specialization drives multiple independent
losses and gains in the bitter taste gene repertoire of Laurasiatherian Mammals.". Frontiers in Zoology (2016): http://europepmc.org/abstract/med/27366197.
10.1186/s12983-016-0161-1
- Zhou, X.; Meng, X.; Liu, Z.; Chang, J.; Wang, B.; Li, M.; Wengel, P.O.-T.; et al. "Population Genomics Reveals Low Genetic
Diversity and Adaptation to Hypoxia in Snub-Nosed Monkeys". Molecular Biology and Evolution 33 10 (2016): 2670-2681.
http://www.scopus.com/inward/record.url?eid=2-s2.0-84994102660&partnerID=MN8TOARS.
10.1093/molbev/msw150
- MacLeod A; Rodríguez A; Vences M; Orozco-terWengel P; García C; Trillmich F; Gentile G; et al. "Hybridization masks speciation
in the evolutionary history of the Galápagos marine iguana.". Proceedings. Biological sciences (2015): http://europepmc.org/abstract/med/26041359.
10.1098/rspb.2015.0425
- Bruford MW; Ginja C; Hoffmann I; Joost S; Orozco-terWengel P; Alberto FJ; Amaral AJ; et al. "Prospects and challenges for
the conservation of farm animal genomic resources, 2015-2025.". Frontiers in genetics (2015): http://europepmc.org/abstract/med/26539210.
10.3389/fgene.2015.00314
- Orozco-terWengel P; Barbato M; Nicolazzi E; Biscarini F; Milanesi M; Davies W; Williams D; et al. "Revisiting demographic
processes in cattle with genome-wide population genetic analysis.". Frontiers in genetics (2015): http://europepmc.org/abstract/med/26082794.
10.3389/fgene.2015.00191
- Barbato M; Orozco-terWengel P; Tapio M; Bruford MW. "SNeP: a tool to estimate trends in recent effective population size trajectories
using genome-wide SNP data.". Frontiers in genetics (2015): http://europepmc.org/abstract/med/25852748.
10.3389/fgene.2015.00109
- Nicolazzi, E.L.; Biffani, S.; Biscarini, F.; Orozco Ter Wengel, P.; Caprera, A.; Nazzicari, N.; Stella, A.. "Software solutions
for the livestock genomics SNP array revolution". Animal Genetics 46 4 (2015): 343-353. http://www.scopus.com/inward/record.url?eid=2-s2.0-84937977768&partnerID=MN8TOARS.
10.1111/age.12295
- Orozco-terWengel PA; Bruford MW. "Mixed signals from hybrid genomes.". Molecular ecology (2014): http://europepmc.org/abstract/med/25088552.
10.1111/mec.12863
- Tobler R; Franssen SU; Kofler R; Orozco-Terwengel P; Nolte V; Hermisson J; Schlötterer C. "Massive habitat-specific genomic
response in D. melanogaster populations during experimental evolution in hot and cold environments.". Molecular biology
and evolution (2014): http://europepmc.org/abstract/med/24150039.
10.1093/molbev/mst205
- Cunha L; Montiel R; Novo M; Orozco-terWengel P; Rodrigues A; Morgan AJ; Kille P. "Living on a volcano's edge: genetic isolation
of an extremophile terrestrial metazoan.". Heredity (2014): http://europepmc.org/abstract/med/24045291.
10.1038/hdy.2013.84
- Marín JC; Orozco-terWengel P; Romero K; Vásquez JP; Varas V; Vianna JA. "Cross-amplification of nonspecific microsatellites
markers: a useful tool to study endangered/vulnerable species of southern Andes deer.". Genetics and molecular research
: GMR (2014): http://europepmc.org/abstract/med/24841651.
10.4238/2014.april.25.4
- González BA; Orozco-Terwengel P; von Borries R; Johnson WE; Franklin WL; Marín JC. "Maintenance of genetic diversity in an
introduced island population of guanacos after seven decades and two severe demographic bottlenecks: implications for camelid
conservation.". PloS one (2014): http://europepmc.org/abstract/med/24663026.
10.1371/journal.pone.0091714
- Marín, J.C.; Orozco-Terwengel, P.; Romero, K.; Vásquez, J.P.; Varas, V.; Vianna, J.A.. "Cross-amplification of nonspecific
microsatellites markers: A useful tool to study endangered/vulnerable species of southern andes deer". Genetics and Molecular
Research 13 2 (2014): 3193-3200. http://www.scopus.com/inward/record.url?eid=2-s2.0-84899656919&partnerID=MN8TOARS.
10.4238/2014.April.25.4
- Orozco-Terwengel P; Andreone F; Louis E; Vences M. "Mitochondrial introgressive hybridization following a demographic expansion
in the tomato frogs of Madagascar, genus Dyscophus.". Molecular ecology (2013): http://europepmc.org/abstract/med/24308649.
10.1111/mec.12558
- Vences M; Hauswaldt JS; Steinfartz S; Rupp O; Goesmann A; Künzel S; Orozco-terWengel P; et al. "Radically different phylogeographies
and patterns of genetic variation in two European brown frogs, genus Rana.". Molecular phylogenetics and evolution
(2013): http://europepmc.org/abstract/med/23632031.
10.1016/j.ympev.2013.04.014
- McCann, N.; Ter Wengel, P.O.; Stanton, D.. "Biosphere: Modelling genetics within ecosystems". Nature 494 7439 (2013):
47-47. http://www.scopus.com/inward/record.url?eid=2-s2.0-84874749405&partnerID=MN8TOARS.
10.1038/495047d
- Marín, J.C.; Varas, V.; Vila, A.R.; López, R.; Orozco-terWengel, P.; Corti, P.. "Refugia in Patagonian fjords and the eastern
Andes during the Last Glacial Maximum revealed by huemul (Hippocamelus bisulcus) phylogeographical patterns and genetic diversity".
Journal of Biogeography 40 12 (2013): 2285-2298. http://www.scopus.com/inward/record.url?eid=2-s2.0-84888028364&partnerID=MN8TOARS.
10.1111/jbi.12161
- Donnelly, R.K.; Harper, G.L.; Morgan, A.J.; Orozco-Terwengel, P.; Pinto-Juma, G.A.; Bruford, M.W.. "Nuclear DNA recapitulates
the cryptic mitochondrial lineages of Lumbricus rubellus and suggests the existence of cryptic species in an ecotoxological
soil sentinel". Biological Journal of the Linnean Society 110 4 (2013): 780-795. http://www.scopus.com/inward/record.url?eid=2-s2.0-84888072405&partnerID=MN8TOARS.
10.1111/bij.12171
- Chiari, Y.; Vieites, D.R.; Louis Jr., E.; Pedrono, M.; Orozco-Terwengel, P.. "Isolation and characterization of six polymorphic
microsatellite loci for the malagasy spider tortoise, pyxis arachnoides and cross-amplification in pyxis planicauda". Amphibia
Reptilia 34 1 (2013): 125-128. http://www.scopus.com/inward/record.url?eid=2-s2.0-84885408911&partnerID=MN8TOARS.
10.1163/15685381-00002866
- Orozco-terWengel P; Kapun M; Nolte V; Kofler R; Flatt T; Schlötterer C. "Adaptation of Drosophila to a novel laboratory environment
reveals temporally heterogeneous trajectories of selected alleles.". Molecular ecology (2012): http://europepmc.org/abstract/med/22726122.
10.1111/j.1365-294x.2012.05673.x
- Orozco-Terwengel, P.; Kapun, M.; Nolte, V.; Kofler, R.; Flatt, T.; Schlãtterer, C.. "Adaptation of Drosophila to a novel laboratory
environment reveals temporally heterogeneous trajectories of selected alleles". Molecular Ecology 21 20 (2012): 4931-4941.
http://www.scopus.com/inward/record.url?eid=2-s2.0-84867574655&partnerID=MN8TOARS.
10.1111/j.1365-294X.2012.05673.x
- Debat V; Bloyer S; Faradji F; Gidaszewski N; Navarro N; Orozco-Terwengel P; Ribeiro V; et al. "Developmental stability: a
major role for cyclin G in drosophila melanogaster.". PLoS genetics (2011): http://europepmc.org/abstract/med/21998598.
10.1371/journal.pgen.1002314
- Pandey RV; Kofler R; Orozco-terWengel P; Nolte V; Schlötterer C. "PoPoolation DB: a user-friendly web-based database for the
retrieval of natural polymorphisms in Drosophila.". BMC genetics (2011): http://europepmc.org/abstract/med/21366916.
10.1186/1471-2156-12-27
- Orozco-terWengel P; Corander J; Schlötterer C. "Genealogical lineage sorting leads to significant, but incorrect Bayesian
multilocus inference of population structure.". Molecular ecology (2011): http://europepmc.org/abstract/med/21244537.
10.1111/j.1365-294x.2010.04990.x
- Charruau P; Fernandes C; Orozco-Terwengel P; Peters J; Hunter L; Ziaie H; Jourabchian A; et al. "Phylogeography, genetic structure
and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates.". Molecular
ecology (2011): http://europepmc.org/abstract/med/21214655.
10.1111/j.1365-294x.2010.04986.x
- Kofler R; Orozco-terWengel P; De Maio N; Pandey RV; Nolte V; Futschik A; Kosiol C; Schlötterer C. "PoPoolation: a toolbox
for population genetic analysis of next generation sequencing data from pooled individuals.". PloS one (2011): http://europepmc.org/abstract/med/21253599.
10.1371/journal.pone.0015925
- Orozco-Terwengel, P.; Corander, J.; SchlÖtterer, C.. "Genealogical lineage sorting leads to significant, but incorrect Bayesian
multilocus inference of population structure". Molecular Ecology 20 6 (2011): 1108-1121. http://www.scopus.com/inward/record.url?eid=2-s2.0-79952453103&partnerID=MN8TOARS.
10.1111/j.1365-294X.2010.04990.x
- Hooftman, D.A.P.; Flavell, A.J.; Jansen, H.; den Nijs, H.C.M.; Syed, N.H.; Sørensen, A.P.; Orozco-ter Wengel, P.; Van de Wiel,
C.C.M.. "Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop
development". Evolutionary Applications 4 5 (2011): 648-659. http://www.scopus.com/inward/record.url?eid=2-s2.0-80052565227&partnerID=MN8TOARS.
10.1111/j.1752-4571.2011.00188.x
- Charruau, P.; Fernandes, C.; Orozco-Terwengel, P.; Peters, J.; Hunter, L.; Ziaie, H.; Jourabchian, A.; et al. "Phylogeography,
genetic structure and population divergence time of cheetahs in Africa and Asia: Evidence for long-term geographic isolates".
Molecular Ecology 20 4 (2011): 706-724. http://www.scopus.com/inward/record.url?eid=2-s2.0-79551662697&partnerID=MN8TOARS.
10.1111/j.1365-294X.2010.04986.x
- MARIA D. S. NUNES; PABLO OROZCO-TER WENGEL; MICHAELA KREISSL; CHRISTIAN SCHLÖTTERER. "Multiple hybridization events between
Drosophila simulans and Drosophila mauritiana are supported by mtDNA introgression". Molecular Ecology 19 21 (2010):
4695-4707. https://doi.org/10.1111%2Fj.1365-294x.2010.04838.x.
10.1111/j.1365-294x.2010.04838.x
- Silbermayr K; Orozco-terWengel P; Charruau P; Enkhbileg D; Walzer C; Vogl C; Schwarzenberger F; Kaczensky P; Burger PA. "High
mitochondrial differentiation levels between wild and domestic Bactrian camels: a basis for rapid detection of maternal hybridization.".
Animal genetics (2010): http://europepmc.org/abstract/med/19968638.
10.1111/j.1365-2052.2009.01993.x
- Nunes, M.D.S.; Orozco-Ter Wengel, P.; Kreissl, M.; Schlötterer, C.. "Multiple hybridization events between Drosophila simulans
and Drosophila mauritiana are supported by mtDNA introgression". Molecular Ecology 19 21 (2010): 4695-4707. http://www.scopus.com/inward/record.url?eid=2-s2.0-78149422271&partnerID=MN8TOARS.
10.1111/j.1365-294X.2010.04838.x
- OROZCO-TERWENGEL PABLO; NAGY ZOLTÁNT; VIEITES DAVIDR; VENCES MIGUEL; LOUIS JR EDWARD. "Phylogeography and phylogenetic relationships
of Malagasy tree and ground boas". Biological journal of the Linnean Society. Linnean Society of London (2008): http://europepmc.org/abstract/AGR/IND44120690.
10.1111/j.1095-8312.2008.01083.x
- Chiari, Y.; Orozco-Terwengel, P.; Vences, M.; Vieites, D.R.; Sarovy, A.; Randrianirina, J.E.; Meyer, A.; Louis Jr., E.. "Genetic
identification of units for conservation in tomato frogs, genus Dyscophus". Conservation Genetics 7 4 (2006): 473-482.
http://www.scopus.com/inward/record.url?eid=2-s2.0-33748889509&partnerID=MN8TOARS.
10.1007/s10592-005-9057-x
- Ruiz-García M; Orozco-terWengel P; Castellanos A; Arias L. "Microsatellite analysis of the spectacled bear (Tremarctos ornatus)
across its range distribution.". Genes & genetic systems (2005): http://europepmc.org/abstract/med/15824457.
10.1266/ggs.80.57
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