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Graduated in Biology at the University of the Azores (2005), with an MSc in Shellfish Biology, Culture and Fisheries from Bangor University (2006) and a PhD in Cellular and Molecular Biology from the University of the Azores (2012). He is an Assistant Researcher at the Center for Functional Ecology (CFE-University of Coimbra, Portugal) currently funded by a CEECIND/01986/2017 - FCT Individual Call to Scientific Employment Stimulus. His research focuses on soil biodiversity and ecosystem functioning. Throughout my career, I have been actively involved in several NGS-based genomic and transcriptomic projects on evolutionary ecology, phylogenetics, and population genetics of metazoans. He co-leads the thematic line “Sustainable Agriculture, Forestry and Fisheries” at the associate laboratory TERRA and the “Soil Health” research line at CFE-UC. This role involves leading innovative projects that bridge molecular ecology and traditional ecological studies to develop new methodologies and approaches in environmental research. _____________________________________________________________________________________________________________________________Luis Cunha is a molecular ecologist. During his PhD, he found that studying the particular and unique features of the reducing environments of geothermal biotopes was most interesting because the ephemeral nature of the geothermal field is expected to favour the colonization by species with remarkable colonization abilities. The volcanically active soil in Azores offered an ideal 'natural laboratory' to address such questions during his PhD project. A brief interruption due to parenthood and some extenuating circumstances impacted his publication record (during 2012-2013). Since his PhD completion, he has published >2.5 papers per year, and he has been actively communicating scientific achievements in international conferences & meetings. _____________________________________________________________________________________________________________________________Currently, he is the joint-Director of the 'Terra Preta de Indio' international network. He has published in a range of different speciality journals in areas of ecotoxicology, invertebrate biology and soil biology with an impact factor, typically ranging between 4-10 (e.g., Scientific Reports, Heredity, GEB, STOTEN, GCB). He has one seminal chapter on soil fauna biology and currently shows an H-index of 15. Moreover, he has shown an extensive track record in taking personal initiative to forge collaborations, which have facilitated his personal development and delivered innovative and exciting science allowing him to secure more than ¿1.6M in research income (80% as co-I and 20% as PI), over the last 7 years. His research projects included 1 post-doctoral researcher and 2 PhD students, and he has supervised 9 MSc students and several undergraduate final-year projects. He has spent long periods dwelling in the Amazonia rainforest and in South African grasslands, preparing/ organising fieldwork and leading teams of both students and researchers (~20 members and 6 expeditions). _____________________________________________________________________________________________________________________________He has been invited to give some seminal talks in subjects such 'The use of transcriptomics in Ecotoxicology' or for instance 'Interculturality and knowledge in Life Sciences research', which show how easy is for him to circulate around different research themes and public alike. The lack of funding for specific activities allowed him to engage with entrepreneurship and a case of crowdsourcing funding, which ended up featured in several media channels like Newsweek. He has also been an active reviewer (https://publons.com/a/149210), and he is a member of several societies such as SETAC, British Ecological Society, Systematic Biology Society, Society for the Study of Evolution and the International Society of Computational Biology.
Identificação

Identificação pessoal

Nome completo
LUÍS FILIPE DAS NEVES CUNHA
Género
Masculino

Nomes de citação

  • CUNHA, LUÍS
  • Cunha, Luis
  • Cunha, L.F.N.
  • Cunha, L.
  • Cunha, L

Identificadores de autor

Ciência ID
D518-3D55-8C71
ORCID iD
0000-0002-5870-2537
Google Scholar ID
https://scholar.google.pt/citations?user=_HJekuoAAAAJ&hl=en

Moradas

  • Departamento de Ciências da Vida Universidade de Coimbra Calçada Martim de Freitas , 3000-456, Coimbra , Coimbra, Portugal (Profissional)

Websites

Domínios de atuação

  • Ciências Agrárias - Agricultura, Silvicultura e Pescas - Ciência dos Solos
  • Ciências Naturais - Ciências Biológicas - Biologia Molecular
  • Ciências Naturais - Ciências Biológicas - Conservação da Biodiversidade
  • Ciências Naturais - Ciências Biológicas - Zoologia

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Português Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1)
Inglês Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1)
Espanhol; Castelhano Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1) Utilizador proficiente (C1)
Francês Utilizador elementar (A1) Utilizador independente (B1) Utilizador elementar (A1) Utilizador elementar (A1)
Formação
Grau Classificação
2018 - 2019
Concluído
Fellow of the Higher Education Academy (Postgraduate Certificate)
Especialização em Education
Higher Education Academy, Reino Unido
2012
Concluído
PhD in Cellular and Molecular Biology (Doutoramento)
Especialização em Cellular and Molecular Biology
Universidade dos Açores, Portugal
"Effects of Extreme Environments of Volcanic Origin on animals: Using Earthworms as Models" (TESE/DISSERTAÇÃO)
Approved with Distinction
2006
Concluído
Master in Shellfish Biology, Fisheries and Culture (Master)
Bangor University Centre for Applied Marine Sciences, Reino Unido
"Nutrition and Culture of the soft coral Sinularia sp." (TESE/DISSERTAÇÃO)
Approved
2005
Concluído
Biology (Licenciatura)
Universidade dos Açores, Portugal
"Fisiologia e Nutricao de Larvas de Lysmata Amboinensis nos primeiros dias de vida" (TESE/DISSERTAÇÃO)
16/20
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento
Empregador
2019/09/01 - Atual Investigador Auxiliar (carreira) (Investigação) Centro de Ecologia Funcional, Portugal
Universidade de Coimbra, Portugal
2015/05/01 - 2018/04/01 Investigador principal (carreira) (Investigação) Cardiff University, Reino Unido
2012/03/01 - 2015/04/30 Pós-doutorado (Investigação) Cardiff University Cardiff School of Biosciences, Reino Unido
Cardiff University Cardiff School of Biosciences, Reino Unido
2005/01/01 - 2005/07/01 Estagiário de Investigação (Investigação) Laboratório de Biologia Mariña Experimental de la UNAM, Sisal, México, México

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento
Empregador
2018/08/01 - 2019/08/31 Leitor (Docente Universitário) University of South Wales, Reino Unido
University of South Wales Faculty of Computing Engineering and Science, Reino Unido

Outros

Categoria Profissional
Instituição de acolhimento
Empregador
2007/02/01 - 2008/12/01 Colaborador da Seccao De Anatomia e Taxonomia Zoologica do Departamento de Biologia Universidade dos Açores, Portugal
2000/07/01 - 2001/07/01 12 Months Navy Training Escola Naval, Portugal
Projetos

Bolsa

Designação Financiadores
2019 - 2023 Through the Path of the Giant: the role of tortoise corridors for earthworm invasion in Galapagos and other factors ($30 000)
NGS-62087R-19
Investigador
Universidad Complutense de Madrid, Espanha
National Geographic Society
Em curso
2019 - 2019 Sustainable soils: Adapting to and mitigating environmental changes in small-scale horticultural production systems (£36 505)
Investigador
Cardiff University
Concluído
2015/05 - 2018/04 Marie Sklodowska-Curie Global Fellowship (Project reference: 660378 ) (£209 279)
660378
Investigador responsável
Cardiff University Cardiff School of Biosciences, Reino Unido
European Commission
Concluído
2015/04 - 2018/04 (as Co-I) Hook a Worm to Catch a Man: Tracking Historical and Recent Human Settlement, Land use & Migration in Neotropical Rainforests using Ecosystem Engineers (£269 000)
Investigador
NERC, ESRC & DFID
2018 - 2018 Impact of long-term pesticide use in Brazilian family farming system (£31 500)
Investigador
Concluído
2017/03 - 2017/12 (as a Co-I) Integrating remote sensing and ground-based spectral analysis to investigate biodiversity of archaeological sites in Amazonia (Co-I: £30 986)
Investigador
Science and Technology Facilities Council
2016 - 2016 Untangling the Volcanic Earthworm Genome ($5237)
Investigador responsável
Cardiff University Cardiff School of Biosciences, Reino Unido
Pacific Biosciences Inc
Concluído
2015/01 - 2015/12 (as a Co-I) A Worm's Trail: Implementing a collaborative network for the study of Historical and Recent Land Use and Soil Management in Neotropical Rainforests (£37 718)
Investigador
NERC, ESRC & DFID
2015 - 2015 (as a Co-I) Ligand-binding speciation of amorphous calcium carbonate and associated Zn and Sr in earthworms living under an extreme environment of volcanic origin (£120 000)
Investigador
Science and Technology Facilities Council
2011 - 2015 Stress in a hot place: Characterising the economics of a pantropical sentinel inhabiting multi-stressor volcanic soils (£380 000)
NE/I026022/1
Investigador
Cardiff University Cardiff School of Biosciences, Reino Unido
2012 - 2012 HOLI-Biopest: Developing a biomonitoring program for pesticide exposure in agricultural systems (40 000€)
Investigador
Fundação Luso-Americana
Concluído
2010 - 2010 A volcanic furnace of Evolution (4740€)
M3.2.4/I/003A/2010
Investigador responsável
Universidade dos Açores, Portugal
Governo dos Açores

Projeto

Designação Financiadores
2022/03/01 - Atual CULTIVAR - Rede de competências para o desenvolvimento sustentável e inovação no setor
Universidade de Coimbra, Portugal
Em curso
2023/01 - 2027/12 BENCHMARKS: Building a European Network for the Characterisation and Harmonisation of Monitoring Approaches for Research and Knowledge on Soils
Investigador responsável
Centro de Ecologia Funcional, Portugal
EU Framework Programme for Research and Innovation Societal Challenges
Em curso
2021/01/01 - 2025/12/31 Laboratório para a Sustentabilidade do Uso da Terra e dos Serviços dos Ecossistemas
LA/P/0092/2020
Universidade de Lisboa Instituto Superior de Agronomia, Portugal

Universidade de Lisboa Instituto de Saúde Ambiental, Portugal

Universidade de Lisboa Centro de Investigação em Agronomia Alimentos Ambiente e Paisagem, Portugal

Universidade de Lisboa Instituto de Geografia e Ordenamento do Território, Portugal

Universidade de Coimbra Centre for Functional Ecology - Science for People & the Planet, Portugal

Universidade de Coimbra, Portugal

Universidade de Lisboa Centro de Estudos Geográficos, Portugal

Associação para a Investigação e Desenvolvimento da Faculdade de Medicina, Portugal

Universidade de Lisboa Centro de Estudos Florestais, Portugal
Fundação para a Ciência e a Tecnologia
Em curso
2011/01/10 - 2014/01/09 An Azorean furnace of evolution: honing molecular-genetic tools for phylogeography and ecotoxicogenomics in a pantropical sentinel inhabiting multi-stressor volcanic soil (120 000€)
PTDC/AAC-AMB/115713/2009
Bolseiro de Doutoramento
Fundação Gaspar Frutuoso, Portugal
Fundação para a Ciência e a Tecnologia
Concluído
Produções

Publicações

Artigo em revista
  1. Quigley, Elise; Silva, Ana L. Patrício; Chelinho, Sónia; Cunha, Luis; Briones, Maria JI.; Sousa, José P.. "Pristine and UV-aged polyethylene microplastics’ impact on gut microbiome and reproduction of earthworm Eisenia andrei". European Journal of Soil Biology 122 (2024): 103640. http://dx.doi.org/10.1016/j.ejsobi.2024.103640.
    10.1016/j.ejsobi.2024.103640
  2. Conrado, Ana C.; Demetrio, Wilian C.; Stanton, David W.G.; Bartz, Marie L.C.; James, Samuel W.; Santos, Alessandra; da Silva, Elodie; et al. "Amazonian earthworm biodiversity is heavily impacted by ancient and recent human disturbance". Science of The Total Environment 895 (2023): 165087. http://dx.doi.org/10.1016/j.scitotenv.2023.165087.
    10.1016/j.scitotenv.2023.165087
  3. DUDAS, RAFAELA T.; DEMETRIO, WILIAN C.; MAIA, LILIANE S.; SÁTIRO, JOSÉ N.O.; SILVA, KARLO A.; NICOLA, VITORIA B.; KILLE, PETER; et al. "Earthworm communities in long-term no-tillage systems and secondary forest fragments in Paraná, Southern Brazil". Zootaxa 5255 1 (2023): 347-361. http://dx.doi.org/10.11646/zootaxa.5255.1.28.
    10.11646/zootaxa.5255.1.28
  4. Dudas, Rafaela T.; Demetrio, Wilian C.; Maia, Liliane S.; Satiro, Jose N. O.; Silva, Karlo A.; Nicola, Vitoria B.; Kille, Peter; et al. "Earthworm communities in long-term no-tillage systems and secondary forest fragments in Paran ?, Southern Brazil". Zootaxa (2023): https://publons.com/wos-op/publon/59625485/.
    10.11646/ZOOTAXA.5255.1.28
  5. Perry, Iain; Hernadi, Szabolcs Balazs; Cunha, Luis; Short, Stephen; Marchbank, Angela; Spurgeon, David J; Orozco-terWengel, Pablo; Kille, Peter. "Molecular insights into high-altitude adaption and acclimatisation of Aporrectodea caliginosa". Life Science Alliance 5 11 (2022): e202201513. http://dx.doi.org/10.26508/lsa.202201513.
    10.26508/lsa.202201513
  6. Lombardo, Umberto; Arroyo-Kalin, Manuel; Schmidt, Morgan; Huisman, Hans; Lima, Helena P.; de Paula Moraes, Claide; Neves, Eduardo G.; et al. "Evidence confirms an anthropic origin of Amazonian Dark Earths". Nature Communications 13 1 (2022): http://dx.doi.org/10.1038/s41467-022-31064-2.
    10.1038/s41467-022-31064-2
  7. Ramalho, Bruna; Dieckow, Jeferson; de Freitas Melo, Vander; Gardner Brown, George; Luzia Simon, Priscila; Alves Ibarr, Mariana; Cunha, Luis; Kille, Peter; TPI Network. "Carbon and nitrogen storage and stability by mineral-organic association in physical fractions of anthropogenic dark earth and of reference soils in Amazonia". CATENA 213 (2022): 106185. http://dx.doi.org/10.1016/j.catena.2022.106185.
    10.1016/j.catena.2022.106185
  8. Sátiro, José Nivaldo de Oliveira; Motta, Antônio Carlos V.; Demetrio, Wilian C.; Segalla, Rodrigo F.; Cremonesi, Marcus Vinicius; Araújo, Eloá Moura; Falcão, Newton Paulo de Souza; et al. "Micronutrient availability in amazonian dark earths and adjacent soils". Geoderma 395 (2021): 115072. http://dx.doi.org/10.1016/j.geoderma.2021.115072.
    10.1016/j.geoderma.2021.115072
  9. Demetrio, Wilian C.; Conrado, Ana C.; Acioli, Agno N.S.; Casadei Ferreira, Alexandre; Bartz, Marie L.C.; James, Samuel W.; da Silva, Elodie; et al. "A "Dirty" Footprint: Macroinvertebrate diversity in Amazonian Anthropic Soils". Global Change Biology (2021): http://dx.doi.org/10.1111/gcb.15752.
    10.1111/gcb.15752
  10. da Silva, Karlo Alves; Nicola, Vitoria Beltrame; Dudas, Rafaela Tavares; Demetrio, Wilian Carlo; Maia, Lilianne dos Santos; Cunha, Luis; Bartz, Marie Luise Carolina; et al. "Pesticides in a case study on no-tillage farming systems and surrounding forest patches in Brazil". Scientific Reports 11 1 (2021): http://dx.doi.org/10.1038/s41598-021-88779-3.
    10.1038/s41598-021-88779-3
  11. Melo, Tamires Oliveira; Franciscon, Luziane; Brown, George; Kopka, Joachim; Cunha, Luis; Martinez-Seidel, Federico; Madureira, Luiz Augusto dos Santos; Hansel, Fabricio Augusto. "Univariate statistical analysis of gas chromatography – mass spectrometry fingerprints analyses". Chemical Data Collections (2021): 100719. http://dx.doi.org/10.1016/j.cdc.2021.100719.
    10.1016/j.cdc.2021.100719
  12. Santos, Alessandra; Cremonesi, Marcus Vinicius; Zanatta, Josiléia Acordi; Cunha, Luis; Drake, Harold L.; Brown, George Gardner. "Emission of greenhouse gases and soil changes in casts of a giant Brazilian earthworm". Biology and Fertility of Soils (2021): http://dx.doi.org/10.1007/s00374-021-01552-6.
    10.1007/s00374-021-01552-6
  13. Ferreira, Talita; Hansel, Fabricio Augusto; Maia, Claudia M.B.F.; Guiotoku, Marcela; Cunha, Luís; Brown, George G.. "Earthworm-biochar interactions: A laboratory trial using Pontoscolex corethrurus". Science of The Total Environment (2021): 146147. http://dx.doi.org/10.1016/j.scitotenv.2021.146147.
    10.1016/j.scitotenv.2021.146147
  14. Etxabe, Amaia Green; Pini, Jennifer M.; Short, Stephen; Cunha, Luis; Kille, Peter; Watson, Gordon J.. "Identifying conserved polychaete molecular markers of metal exposure: Comparative analyses using the Alitta virens (Annelida, Lophotrochozoa) transcriptome.". Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology (2020): 108913. http://dx.doi.org/10.1016/j.cbpc.2020.108913.
    10.1016/j.cbpc.2020.108913
  15. White, Hannah J.; León-Sánchez, Lupe; Burton, Victoria J.; Cameron, Erin K.; Caruso, Tancredi; Cunha, Luís; Dirilgen, Tara; et al. "Methods and approaches to advance soil macroecology". Global Ecology and Biogeography (2020): http://dx.doi.org/10.1111/geb.13156.
    10.1111/geb.13156
  16. Ortíz-Gamino, Diana; Gregorio, Josefat; Cunha, Luis; Martínez-Romero, Esperanza; Fragoso, Carlos; Ortíz-Ceballos, Ángel I.. "Population genetics and diversity structure of an invasive earthworm in tropical and temperate pastures from Veracruz, Mexico". ZooKeys 941 (2020): 49-69. http://dx.doi.org/10.3897/zookeys.941.49319.
    10.3897/zookeys.941.49319
  17. Taheri, S.; Decaëns, T.; Cunha, L.; Brown, G. G.; Da Silva, E.; Bartz, M. L. C.; Baretta, D.; Dupont, L.. "Genetic evidence of multiple introductions and mixed reproductive strategy in the peregrine earthworm Pontoscolex corethrurus". Biological Invasions (2020): http://dx.doi.org/10.1007/s10530-020-02270-0.
    10.1007/s10530-020-02270-0
  18. Talavera, J.A.; Cunha, L.; Arévalo, J.R.; Talavera, I.P.; Kille, P.; Novo, M.. "Anthropogenic disturbance and environmental factors drive the diversity and distribution of earthworms in São Miguel Island (Azores, Portugal)". Applied Soil Ecology 145 (2020): 103301. http://dx.doi.org/10.1016/j.apsoil.2019.06.004.
    10.1016/j.apsoil.2019.06.004
  19. Nadolny, Herlon; Santos, Alessandra; Demetrio, Wilian; Ferreira, Talita; Maia, Liliane dos Santos; Conrado, Ana Caroline; Bartz, Marie; et al. "Recommendations for assessing earthworm populations in Brazilian ecosystems". Pesquisa Agropecuária Brasileira 55 (2020): http://dx.doi.org/10.1590/s1678-3921.pab2020.v55.01006.
    10.1590/s1678-3921.pab2020.v55.01006
  20. Ferreira, Nuno G.C.; Morgado, Rui G.; Cunha, Luís; Novo, Marta; Soares, Amadeu M.V.M.; Morgan, Andrew J.; Loureiro, Susana; Kille, Peter. "Unravelling the molecular mechanisms of nickel in woodlice.". Environmental Research 176 (2019): 108507. http://dx.doi.org/10.1016/j.envres.2019.05.038.
    10.1016/j.envres.2019.05.038
  21. James, Samuel W; Bartz, Marie Luise Carolina; Stanton, David; Conrado, Ana Caroline; Dupont, L; Taheri, S; Silva, Elodie; Cunha, Luis; Brown, George. "A neotype for Pontoscolex corethrurus (Müller, 1857) (Clitellata)". Zootaxa 4545 1 (2019): 124. http://dx.doi.org/10.11646/zootaxa.4545.1.7.
    10.11646/zootaxa.4545.1.7
  22. S. Taheri; S. James; V. Roy; T. Decaëns; B.W. Williams; F. Anderson; R. Rougerie; et al. "Complex taxonomy of the ‘brush tail’ peregrine earthworm Pontoscolex corethrurus". Molecular Phylogenetics and Evolution (2018): https://doi.org/10.1016%2Fj.ympev.2018.02.021.
    10.1016/j.ympev.2018.02.021
  23. Craig Anderson; Luis Cunha; Pierfrancesco Sechi; Peter Kille; David Spurgeon. "Genetic variation in populations of the earthworm, Lumbricus rubellus, across contaminated mine sites". BMC Genetics 18 1 (2017): https://doi.org/10.1186%2Fs12863-017-0557-8.
    10.1186/s12863-017-0557-8
  24. Cunha, L.; Thornber, A.; Kille, P.; Morgan, A.J.; Novo, M.. "A large set of microsatellites for the highly invasive earthworm Amynthas corticis predicted from low coverage genomes". Applied Soil Ecology 119 (2017): 152-155. http://dx.doi.org/10.1016/j.apsoil.2017.05.029.
    10.1016/j.apsoil.2017.05.029
  25. Carolina Parelho; Armindo dos santos Rodrigues; Filipe Bernardo; Maria do Carmo Barreto; Luís Cunha; Patrícia Poeta; Patrícia Garcia. "Biological endpoints in earthworms ( Amynthas gracilis ) as tools for the ecotoxicity assessment of soils from livestock production systems". Ecological Indicators (2017):
    10.1016/j.ecolind.2017.09.045
  26. Conrado, Ana C.; Arruda, Hugo; Stanton, David W.G.; James, Samuel W.; Kille, Peter; Brown, George; Silva, Elodie; et al. "The complete mitochondrial DNA sequence of the pantropical earthworm Pontoscolex corethrurus (Rhinodrilidae, Clitellata): Mitogenome characterization and phylogenetic positioning". ZooKeys 688 (2017): 1-13. http://dx.doi.org/10.3897/zookeys.688.13721.
    10.3897/zookeys.688.13721
  27. Rougon-Cardoso, A.; Flores-Ponce, M.; Ramos-Aboites, H.E.; Martínez-Guerrero, C.E.; Hao, Y.-J.; Cunha, L.; Rodríguez-Martínez, J.A.; et al. "The genome, transcriptome, and proteome of the nematode Steinernema carpocapsae: Evolutionary signatures of a pathogenic lifestyle". Scientific Reports 6 (2016): http://www.scopus.com/inward/record.url?eid=2-s2.0-84996758811&partnerID=MN8TOARS.
    10.1038/srep37536
  28. Cunha, L.; Brown, G.G.; Stanton, D.W.G.; Da Silva, E.; Hansel, F.A.; Jorge, G.; McKey, D.; et al. "Soil animals and pedogenesis: The role of earthworms in anthropogenic soils". Soil Science 181 3-4 (2016): 110-125. http://www.scopus.com/inward/record.url?eid=2-s2.0-84963657677&partnerID=MN8TOARS.
    10.1097/SS.0000000000000144
  29. Novo M; Fernández R; Andrade SC; Marchán DF; Cunha L; Díaz Cosín DJ. "Phylogenomic analyses of a Mediterranean earthworm family (Annelida: Hormogastridae).". (2015): http://europepmc.org/abstract/med/26522608.
    10.1016/j.ympev.2015.10.026
  30. Novo, M.; Cunha, L.; Maceda-Veiga, A.; Talavera, J.A.; Hodson, M.E.; Spurgeon, D.; Bruford, M.W.; Morgan, A.J.; Kille, P.. "Multiple introductions and environmental factors affecting the establishment of invasive species on a volcanic island". Soil Biology and Biochemistry 85 (2015): 89-100. http://dx.doi.org/10.1016/j.soilbio.2015.02.031.
    10.1016/j.soilbio.2015.02.031
  31. Novo, Marta; Andre, Jane; Cunha, Luis; Morgan, Andrew John; Spurgeon, David; Kille, Peter. "The functional ghost in the genome machine: Holistic mapping of environmentally induced changes in the epigenome of a soil sentinel". Toxicology Letters 229 (2014): S18. http://dx.doi.org/10.1016/j.toxlet.2014.06.095.
    10.1016/j.toxlet.2014.06.095
  32. Cunha, L.; Montiel, R.; Novo, M.; Orozco-terWengel, P.; Rodrigues, A.; Morgan, A. J.; Kille, P.. "Living on a volcano's edge: genetic isolation of an extremophile terrestrial metazoan". Heredity 112 2 (2014): 132-142.
    10.1038/hdy.2013.84
  33. Cunha, Luis; Campos, Itxaso; Montiel, Rafael; Rodrigues, Armindo; Morgan, Andrew J.. "Morphometry of the epidermis of an invasive megascoelecid earthworm (Amynthas gracilis, Kinberg 1867) inhabiting actively volcanic soils in the Azores archipelago". Ecotoxicology and Environmental Safety 74 1 (2011): 25-32.
    10.1016/j.ecoenv.2010.08.004
  34. Cunha, Luis; Zanon, Vittorio; Andre Amaral; Jorge Ferreira; Rodrigues, Armindo dos Santos. "Altered inorganic composition of enamel and dentin in mice teeth chronically exposed to an enriched mineral environment at Furnas, São Miguel (Azores)". Arquipelago. Life and Marine Sciences 28 (2011): 33-37. http://hdl.handle.net/10400.3/1225.
    Acesso aberto • Publicado
  35. Ventura Garcia, Patricia; Cunha, Luis; Amaral, Andre; Rodrigues, Armindo. "Bioavailability of heavy metals and apoptotic effects on the midgut cells of Pseudaletia unipuncta (Lepidoptera: Noctuidae) inhabiting volcanic environments". Toxicology Letters 189 (2009): S196-S196.
    10.1016/j.toxlet.2009.06.594
  36. Cunha, Luis; Mascaro, Maite; Chiapa, Xavier; Costa, Ana; Simoes, Nuno. "Experimental studies on the effect of food in early larvae of the cleaner shrimp Lysmata amboinensis (De Mann, 1888) (Decapoda : Caridea : Hippolytidae)". Aquaculture 277 1-2 (2008): 117-123.
    10.1016/j.aquaculture.2008.02.014
  37. Cunha, Luis; Amaral, Andre; Medeiros, Vera; Martins, Gustavo M.; Wallenstein, Francisco F. M. M.; Couto, Ruben P.; Neto, Ana I.; Rodrigues, Armindo. "Bioavailable metals and cellular effects in the digestive gland of marine limpets living close to shallow water hydrothermal vents". Chemosphere 71 7 (2008): 1356-1362.
    10.1016/j.chemosphere.2007.11.022
  38. Rodrigues, Armindo; Cunha, Luis; Amaral, Andre; Medeiros, Jorge; Garcia, Patricia. "Bioavailability of heavy metals and their effects on the midgut cells of a phytopaghous insect inhabiting volcanic environments". Science of the Total Environment 406 1-2 (2008): 116-122.
    10.1016/j.scitotenv.2008.07.069
  39. Cunha, L.; Martins, G.M.; Amaral, A.; Rodrigues, A.; Cunha, Luis; Martins, Gustavo M.; Amaral, Andre; Rodrigues, Armindo. "A case of simultaneous hermaphroditism in the Azorean endemic limpet Patella candei gomesii (Mollusca: Patellogastropoda), a gonochoristic species". Invertebrate Reproduction and Development 50 4 (2007): 203-205. http://www.scopus.com/inward/record.url?eid=2-s2.0-41549087438&partnerID=MN8TOARS.
    10.1080/07924259.2007.9652247
Capítulo de livro
  1. Brown, George G.; da Silva, Elodie; Thomazini, Marcílio J.; Niva, Cíntia C.; Decaëns, Thibaud; Cunha, Luís F. N.; Nadolny, Herlon S.; et al. "The role of soil fauna in soil health and delivery of ecosystem services". In Managing soil health for sustainable agriculture Volume 1, 197-241. Burleigh Dodds Science Publishing, 2018.
    10.19103/as.2017.0033.11
Poster em conferência
  1. Dudas, RT; Bartz, MLC; Paula, A.; Marques, F.; Martins, C.; Cunha, L.; Castro, P.. "Farmers' perception of soil fauna and their ecosystem services". Trabalho apresentado em FARM to FORK, our food, our health, our future, 2023.
  2. Mariana Nunes; Milos Vittori; Polona Mrak; Katja Kuncic; Natasha Chipanovska; Urban Bogataj; Ricardo Leitao; et al. "Alteration in the digestive system of isopods living under extreme environmental conditions of a geothermal field". Trabalho apresentado em 12th International Symposium on Terrestrial Isopod Biology, 2023.
  3. Demetrio, W.; Dudas, R.; Maia, L.; Alves, K.; Nicola, V.; Pasini, A.; Kille, P.; et al. "Chemical and physical characteristics in areas under consolidated no-till systems and secondary forests in the state of Parana (original title: Características químicas e físicas em áreas sob sistemas de plantio direto consolidado e florestas secundárias no estado do Paraná)". Trabalho apresentado em 16º Encontro Nacional de Plantio Direto na Palha, 2018.
  4. Cunha, L.. "Soil biodiversity footprints in human-modified landscapes: The case of the Amazonian Dark Earths". Trabalho apresentado em 54th Annual Meeting of the Association for Tropical Biology and Conservation, 2017.
  5. Assis, G.T.P.; Brown, G.G.; Kille, P.; Cunha, L.. "Terra Preta de Índio Network: A Collaborative Network for the study of Anthropic Ecosystems Across Brazilian Biomes". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  6. Cunha, L.; Brown, G.G.; Kille, P.. "Characterizing Amazonian Dark Earths and Adjacent Soils: experimental approach for chemical, physical and biological sampling". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  7. Segalla, R.; Demetrio, W.; Silva, E.; Ferreira T.; Nadolny, H.; Conrado, A.; Kille, P.; Brown, G.G.; Cunha, L.. "Chemical aspects and quality of organic matter in Amazonian Dark Earths". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  8. Conrado, A.; Demetrio, W.; Silva, E.; Segalla, R.; Nadolny, H.; Ferreira, T.; Kille, P.; Brown, G.G.; Cunha, L.. "Soil Biodiversity in Amazonian Dark Earths". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  9. Demetrio, W.; Silva, E.; Ferreira, T.; Segalla, R.; Nadolny, H.; Conrado, A.; Kille, P.; Brown, G.G.; Cunha, L.. "Soil Macroinvertebrates In Amazonian Dark Earth And Adjacent Soils". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  10. Silva, E.; Velasquez, E.; Tapia-Coral, S.; Zangerlé, A.; Lavelle, P.; Kille, P.; Brown, G.G.; Cunha, L.; TPI Network. "Soil macro-morphology in Amazonian Dark Earth areas". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  11. Mota, A.F.; Brown, G.G.; Pedrosa, F.O.; Cunha, L.; Kille, P.; Souza, E.M.; Chubatsu, L.S.; TPI Network. "Analysis of bacterial communities of soil samples from archaeological sites in the Amazon region". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  12. Ferreira, T.; Demetrio, W.; Silva, E.; Segalla, R.; Nadolny, H.; Conrado, A.; Kille, P.; Brown, G.G.; Cunha, L.. "Biochar-earthworm interactions: the case of Pontoscolex corethrurus (Müller, 1857)". Trabalho apresentado em Fifth International Workshop of The Terra Preta Program, 2016.
  13. Santos, A.; Da Silva, E.; Cunha, L.F.N.; Stanton, D.; Kille, P.; Decaëns, T.; James, S.W.; et al. "Abundância, Biomassa E Riqueza De Minhocas Em Á Reas De Terra Preta De Índio (Tpi) Em Manaus E Iranduba (Am)". Trabalho apresentado em Simpósio Engenheiros Edáficos, Fertilidade Do Solo E Terra Preta De Índio (TPI), 2015.
  14. Ferreira, Nuno G. C.; Morgado, R.; Cardoso, D.N.; Santos, M.J.G.; Cunha, L.; Morris, C.; Rocha, C. ; et al. Autor correspondente: Ferreira, Nuno G. C.. "Tracking multilevel effects of nickel in Porcellionides pruinosus (Isopoda): from genomics to organisms.". Trabalho apresentado em 24th SETAC Europe, 2014.
  15. Ferreira, Nuno G. C.; Morgado, Rui G.; Novo, M.; Cunha, L.; Soares, Amadeu M.V.M. ; Kille, Peter; Loureiro, Susana; et al. "Tracking of novel potential biomarkers in Porcellionides pruinosus (Isopoda) exposed to nickel: a transcriptomic approach". Trabalho apresentado em 1st International Environmental ¿Omics Synthesis Conference, 2013.
  16. Cunha, L.F.N.; Novo, M.; Arruda, H.; Hodson, M.; Spurgeon, D.; Rodrigues, A.S.; Camarinho, R.; et al. "When hot is not too hot: an earthworm dwelling under extreme volcanic conditions". Trabalho apresentado em SETAC 34th Annual Meeting, 2013.
  17. Cunha, L.; Arruda, H.; Parelho, C.; Barreto, M.C.; Camarinho, R.; Garcia, P.; Kille, P.; Morgan, A.; Rodrigues, A.. "The relevance of Pontoscolex corethrurus as a bioindicator of soil quality under geogenic stress conditions". Trabalho apresentado em SETAC North America 34th Annual Meeting, 2013.
  18. Novo, M.; Cunha, L.; Hodson, M.; Spurgeon, D.; Camarinho, R.; Viveiros, F.; Silva, C.P.P.; et al. "Inhabiting multi-stressor soils. Persistence of an earthworm under extreme volcanic conditions". Trabalho apresentado em First Environmental ‘Omics Synthesis Conference, 2013.
  19. Cunha, L.; Campos, I.; Montiel, R.; Morgan, A.; Rodrigues, A.. "Morphometric changes of the Epidermis of an invasive megascoelecid earthworm (Amynthas gracilis, Kinberg 1867) inhabiting actively volcanic soils in the Azores archipelago". Trabalho apresentado em VII encontro Nacional de Biologia Evolutiva, 2011.
  20. Cunha, L.; Aguiar, P.; Hernandez, G.; Barois, I.; Morgan, A.; Simoes, N.; Rodrigues, A.; Montiel, R.. "Living in the Edge at Extreme Environments of Volcanic Origin: Azorean Earthworms and its Symbiotic Microbial Populations". Trabalho apresentado em 8th International Congress on Extremophiles, 2010.
  21. Cunha, L.; Hernandez, G.; Aguiar, P.; Barois, I.; Morgan, A.; Simoes, N.; Rodrigues, A.; Montiel, R.. "Dominant Microbial Populations Associated with Earthworms Living close to Extreme Environments of Volcanic Origin: A Comparison Between Azorean and Mexican Populations of Pontoscolex corethrurus". Trabalho apresentado em The 9th International Symposium on Earthworm Ecology, 2010.
  22. Cunha, L.. "The importance of field studies for assessment of actively volcanic soil quality – the terrestrial equivalent of hydrothermal vents". Trabalho apresentado em Paris Interdisciplinary PhD Symposium, 2009.
  23. Cunha, L.; Lewis, L.V.. "Fragmentation Recovery and Growth of a Soft Coral Using a Popular Propagation Method.". Trabalho apresentado em 43rd EMBS – European Marine Biology, 2008.
  24. Cunha, L.; Amaral, A.F.S.; Zanon, V.; Rodrigues, A.S.. "Structure and X-ray microanalysis of the lower incisor of a mammal inhabiting a volcanic hydrothermal field". Trabalho apresentado em Fourth International Conference on Metals and Genetics, 2008.
  25. Rodrigues, A.; Cunha, L.; Medeiros, J.; Garcia, P.; Amaral, A.. "Can Mythimna unipuncta be a useful bioindicator of soil and pasture quality in volcanic environments?". Trabalho apresentado em SETAC North America 28th Annual Meeting - Urban Environmental Issues: Impacts on Ecological Systems, 2007.
  26. Rodrigues, A.; Cunha, L.; Martins, G.; Wallenstein, F.; Couto, R.; Neto, A.; Amaral, A.. "Structural effects in the digestive gland of marine limpets living close to superficial hydrothermanl vents". Trabalho apresentado em SETAC North America 28th Annual Meeting - Urban Environmental Issues: Impacts on Ecological Systems, 2007.
  27. Cunha, L.; Mascaro, M.; Chiapa, X.; Costa, A.; Simões, N.. "Effect of food in early larvae of Lysmata amboinensis (De Mann, 1888)". Trabalho apresentado em The Crustacean society mid-year meeting, 2007.
  28. Simões, N.; Hidalgo-Arcos, L.E.; Hernandez, E.H.; Robles-Gil, A.A.; Pestaña, L.R.; Cunha, L.; Tolentino, S.D.; et al. "Cultivo en cautiverio de crustáceos ornamentales del Caribe Mexicano como una medida de mitigación al impacto potencial de la captura directa del medio natural: Presentación de especies potenciales y revisión del estado del arte". Trabalho apresentado em III Congreso Mexicano de Arrecifes de Coral, 2006.
Recurso online
  1. Demetrio WC; Conrado AC; Acioli AN; Ferreira AC; Bartz ML; James SW; da Silva E; et al. A “Dirty” Footprint: Anthropogenic Soils Promote Biodiversity in Amazonian Rainforests. 2019. http://europepmc.org/abstract/PPR/PPR70526.
    10.1101/552364
Relatório
  1. Hannah C Macdonald; Luis Cunha; Michael W Bruford. 2016. Development of genomic resources for four potential environmental bioindicator species: Isoperla grammatica , Amphinemura sulcicollis , Oniscus asellus and Baetis rhodani .. http://dx.doi.org/10.1101/046227.
    10.1101/046227
  2. Luis Cunha Luis Cunha. 2016. Untangling the Volcanic Earthworm Genome. http://dx.doi.org/10.18258/6890.
    10.18258/6890
  3. Dionisio, Maria Ana; Joana Micael; Parente, Manuela; Norberto R; Cunha A; Brum J; CUNHA, LUÍS; Lopes C; Costa A.C.. 2008. Contributo Para O Conhecimento Da Biodiversidade Marinha Da Ilha Das Flores. Universidade ds Acores. http://hdl.handle.net/10400.3/715.
Resumo em conferência
  1. Dudas, Rafaela; Demetrio, Wilian C.; Maia, L.; CUNHA, LUÍS; Brown, George; et al.. "Populações De Minhocas Áreas Sob Plantio Direto Consolidado E Florestas Secundárias No Estado Do Paraná". Trabalho apresentado em 16º Encontro Nacional de Plantio Direto na Palha, 2018, Sorriso/MT. Sistema Plantio Direto: Entenda Os Desafios Atuais. Prepare-Se Para O Futuro, 2018.
  2. Demetrio, Wilian C.; CUNHA, LUÍS; Maia, L.; Alves, K.; Nicola, V .; Pasini, Amarildo; Kille, Peter; Oliveira, C ....; Brown, George. "Características Químicas E Físicas Em Áreas Sob Sistemas De Plantio Direto Consolidado E Florestas Secundárias No Estado Do Paraná". Trabalho apresentado em 16º Encontro Nacional de Plantio Direto na Palha, 2018.
    Publicado
  3. Brown, George; Niva C.N.; Silva, E..; CUNHA, LUÍS; MARIE L.C. BARTZ; Pasini, Amarildo; Nadolny, Herlon S.; Lavelle, Patrick. "Fauna Edáfica Como Prestadora De Serviços Ecossistêmicos". Trabalho apresentado em Fertbio 2016, 2016.
  4. Brown, George; Bartz, M. L. C.; James, Samuel W; Cunha, Luis; et al.. "Earthworm Taxonomy, Biology And Ecology. An Overview Of Recent Advances (2013-2016) In Brazil". Trabalho apresentado em 7th International Symposium On Oligochaete Taxonomy, Painpont, 2016.
  5. Silva, E.; James, S.W.; Rosa, M.G.; Schuhli, G.S.; Bartz, M.; Baretta, D.; Decaëns, T.; et al. "Use Of DNA Barcoding For Brazilian Earthworm Biodiversity: Untangling Taxonomy For Conservation". Trabalho apresentado em 7th International Oligochaete Taxonomy Meeting, Painpoint, 2016.
  6. Cunha, Luis; Bartz, M. L. C.; Demetrio, Wilian C.; Silva, T. A. C.; James, Samuel W; da Silva, Elodie; Stanton, David; et al. "Earthworms And Amazonian Dark Earths: Improving Understanding Of The Relationships Between Soil Management, Biodiversity and Function". Trabalho apresentado em 7th International Oligochaete Taxonomy Meeting, Painpoint, 2016.
  7. Velasquez, Elena; Tapia-Coral, S.; da Silva, Elodie; Pena-Venegas, Clara; Pucci, P; Cunha, Luis; Lavelle, Patrick; Brown, George. "TPI Network . Terra Preta Do Indio: Descubriendo Sus Misterios A Través De La Morfología Del Suelo". Trabalho apresentado em Simpósio Engenheiros Edáficos, Fertilidade Do Solo E Terra Preta De Índio, Curitiba, 2015.
  8. Silva, T. A. C.; Correa, R. B.; Santos, Alessandra; Ferreira, Alexandre; Nadolny, Herlon S.; Cunha, Luis; da Silva, Elodie; et al. "População e biomassa De Minhocas Em Terra Preta De Índio No Amazonas Utilizando Diferentes Metodologias De Coleta". Trabalho apresentado em Simpósio Engenheiros Edáficos, Fertilidade Do Solo e Terra Preta De Índio, Curitiba, 2015.
  9. Santos, Alessandra; da Silva, Elodie; Cunha, Luis; Stanton, David; Kille, Peter; Decaëns, Thibaud; James, Samuel W; et al. "Abundância, Biomassa e Riqueza de Minhocas em Áreas De Terra Preta De Índio (TPI) em Manaus e Iranduba (AM)". Trabalho apresentado em Simpósio Engenheiros Edáficos, Fertilidade Do Solo E Terra Preta De Índio, Curitiba, 2015.
  10. Cunha, Luis; Novo, Marta; Arruda, Hugo; Hodson, Mark; Spurgeon, David; Rodrigues, Armindo dos Santos; Camarinho, Ricardo; et al. "Inhabiting multi-stressor soils: persistence of an earthworm under extreme volcanic conditions". Trabalho apresentado em X International Earthworm Ecology Symposium, Athens, 2014.
  11. Novo, Marta; Cunha, Luis; Hodson, Mark; Spurgeon, David; Bruford, M.W.; Morgan, Andrew John; Kille, Peter. "Multiple introductions and environmental preferences of invasive earthworms in Azores (Portugal)". Trabalho apresentado em X International Earthworm Ecology Symposium, Athens, 2014.
  12. Ferreira, Nuno G. C.; Morgado, Rui; Novo, Marta; Cunha, Luis; Soares, Amadeu M.V.M.; Kille, Peter; Loureiro, Susana. "Tracking novel potential biomarkers in Porcellionides pruinosus (Isopoda) exposed to a nickel: a transcriptomic approach". Trabalho apresentado em First Environmental ‘Omics Synthesis Conference, Cardiff, 2013.
  13. Cunha, Luis; Novo, Marta; Hodson, Mark; Spurgeon, David; Camarinho, Ricardo; Viveiros, F; Silva, C.P.P; et al. "Inhabiting Multi-stressor Soils. Persistence of An Earthworm Under Extreme Volcanic Conditions". Trabalho apresentado em First Environmental ‘Omics Synthesis Conference, Cardiff, 2013.
Tese / Dissertação
  1. CUNHA, LUÍS. "Effects of the extreme environment of volcanic origin in organisms : using earthworms as biological models". Doutoramento, Universidade dos Açores, 2012. http://hdl.handle.net/10400.3/3968.
  2. CUNHA, LUÍS. "Propagation and Nutrition of the soft coral Sinularia s.p.". Mestrado, Bangor University, 2006. http://piecemo.sisal.unam.mx/cgi-bin/dl.cgi?id=47.
  3. CUNHA, LUÍS. "Physiology and Nutrition in Larvae of the Cleaner Shrimp Lysmata amboinensis in the First Days of Life". Licenciatura, Universidade dos Açores, 2005. http://hdl.handle.net/10400.3/3967.
Website
  1. CUNHA, LUÍS. Untangling the Volcanic Earthworm Genome. 2016. https://experiment.com/projects/untangling-the-volcanic-earthworm-genome.

Outros

Conjunto de dados
  1. Cunha, Luis. Recommendations for assessing earthworm populations in Brazilian ecosystems. Dryad.
Outra produção
  1. Genetic diversity and population structure in an invasive pantropical earthworm along an altitudinal gradient. 2017. Diana Ortíz-Gamino; Luis Cunha; Esperanza Martínez-Romero; Norma Flores-Estévez; Ángel I Ortíz-Ceballos. https://doi.org/10.7287/peerj.preprints.3024.
    10.7287/peerj.preprints.3024
Atividades

Apresentação oral de trabalho

Título da apresentação Nome do evento
Anfitrião (Local do evento)
2021/12 Fronteiras na investigação em Ecologia 1° Encontro de Sistemas de Agroflorestas de Sucessão
Escola Superior Agrária de Coimbra (Coimbra, Portugal)
2021/05 Soil Macrofauna in Human-made Landscapes Global Biodiversity Festival
Exploring by the Seat of Your Pants (Estados Unidos)
2021/02/28 Soil Biodiversity Signatures in Anthropogenic Ecosystems VI Encontro de Ecologia (meet.Eco Coimbra)
University of Coimbra (Coimbra, Portugal)
2017/11/30 Biodiversity Footprints in Amazonian Dark Earths OnE Division Seminar
Cardiff University (Cardiff, Reino Unido)
2017 Soil biodiversity footprints in human-modified landscapes: The case of the Amazonian Dark Earths 1st MCAA BRAZIL-EUROPE Workshop (BREUW): Building a sustainable future based on cooperative science, technology and education
Universidade Federal do Maranhão (Sao Luis, Brasil)
2017 Interculturality and knowledge in Life Sciences research GLOCADEMICS – “Researchers’ Science Diplomacy: North-South reciprocal intercultural responsibility”
University of Coimbra (Coimbra, Portugal)
2017 Comunidade De Minhocas Em Solos Antrópicos E Áreas Adjacentes Na Amazônia Central XXXVI Congresso Brasileiro De Ciências Do Solo
(Belem, Brasil)
2017 Hook a worm to catch a man European Conference of Tropical Biology
(Brussels, Bélgica)
2016 The use of transcriptomics for assessing environmental stress: the story of an earthworm living inside a volcano ECOTOX 2016 -- Congresso Brasileiro de Ecotoxicologia
Pontifícia Universidade Católica do Paraná (2016, Brasil)
2016 The 'Terra Preta de Índio' research network Fifth International Workshop of the Terra Preta Program
ESALQ - Universidade de Sao Paulo (Piracicaba, Brasil)
2016 Phylogenetic assessment within a complex of tropical peregrine species, Pontoscolex corethrurus Annual Meeting of the Association for Tropical Biology and Conservation
ATBC (Montpellier, França)
2016 Amazonian Dark Earths: Improving Understanding of The Relationships Between Soil Management, Biodiversity and Function International Oligochaete Taxonomy Meeting
(Rennes, França)
2016 Fauna Edáfica Como Prestadora De Serviços Ecossistêmicos FertBio
(Goiania, Brasil)
2016 Earthworm Taxonomy, Biology And Ecology. An Overview of Recent Advances (2013-2016) In Brazil International Symposium on Oligochaete Taxonomy
(Paimpoint, França)
2016 Use of DNA Barcoding for Brazilian Earthworm Biodiversity: Untangling Taxonomy for Conservation 7th International Oligochaete Taxonomy Meeting
(Paimpoint, França)
2016 The emergence of an interdisciplinary collaborative network and potential for the future: the TPI Network 2nd TPI Network Workshop - Using remote sensing in the study of Amazonian Ecosystems
(Porto Velho, Brasil)
2016 Hook a worm to catch a man iEOS Ghent meeting
(Ghent, Bélgica)
2016 Actions of the TPI project up to now and expected new projects 2nd TPI Network Workshop - Using remote sensing in the study of Amazonian Ecosystems
UNIR (Porto Velho, Brasil)
2016 Towards a Generalised Method for Environmental Epigenetics: Global and Differential Genome-Wide Epigenetic Signatures in an Earthworm Exposed to a Multi-stressor Environment iEOS Ghent meeting
(Ghent, Bélgica)
2015 As Terras Pretas de Indio: Lições aprendidas e Pesquisas Diálogo Construtivo
EMBRAPA (Curitiba, Brasil)
2015 Tpi Network . População E B Iomassa De Minhocas Em Terra Preta De Índio No Amazonas Utilizando Diferentes Metodologias De Coleta Simpósio Engenheiros Edáficos, Fertilidade Do Solo E Terra Preta De Índio (Tpi)
(Curitiba, Brasil)
2015 Terra Preta Do Indio: Descubriendo Sus Misterios A Través De La Morfología Del Suelo Simpósio Engenheiros Edáficos, Fertilidade Do Solo E Terra Preta De Índio (Tpi)
(Curitiba, Brasil)
2014 Hot but not too hot to handle: Persistence of an earthworm under extreme volcanic conditions Sensitive Biomarkers in Ecotoxicology
CEBA-Azores (Ponta Delgada, Portugal)
2014 Inhabiting multi-stressor soils: persistence of an earthworm under extreme volcanic conditions Abstract book X International Earthworm Ecology Symposium
(Athens, Estados Unidos)
2013 Living on a volcano’s edge: Genetic isolation of an extremophile terrestrial metazoan Evolution 2013
(Salt Lake City, Estados Unidos)
2013 Tracking novel potential biomarkers in Porcellionides pruinosus (Isopoda) exposed to a nickel: a transcriptomic approach First Environmental ‘Omics Synthesis Conference
(Cardiff, Reino Unido)

Orientação

Título / Tema
Papel desempenhado
Curso (Tipo)
Instituição / Organização
2021 - 2025 Evaluation of Microbial Bioindicators of Soil Health and Ecosystem Function in Agricultural Systems
Coorientador de Ricardo Leitão
Doutoramento em Biociências, especialidade em Ecologia
Universidade de Coimbra, Portugal
2023 - 2023 Influência de minhocas (Eisenia andrei) na germinação de sementes de murta (Myrtus communis) e nabo (Brassica rapa)
Orientador de Lucas Moniz
Biologia (Licenciatura/Bacharelato)
Universidade de Coimbra, Portugal
2023 - 2023 Influência de isópodes (Porcellionides pruinosus) na germinação de sementes de murta (Myrtus communis) e nabo (Brassica rapa)
Orientador de Arthur Marti
Biologia (Licenciatura/Bacharelato)
Universidade de Coimbra, Portugal
2023 - 2023 Avaliação da diversidade de oligoquetas terrestres usando técnicas moleculares (código de barras de ADN)
Orientador de Diana Correia
Biologia (Licenciatura/Bacharelato)
Universidade de Coimbra, Portugal
2023 - 2023 Through the Path of the Giant: the role of tortoise corridors for earthworm invasion in Galapagos and other factors
Orientador de André Soares Filipe
Biologia (Licenciatura/Bacharelato)
Universidade de Coimbra, Portugal
2023 - 2023 Final year Internship on Nanopore Sequencing
Orientador de Diogo Seco da Fonseca
Biotecnologia (Licenciatura/Bacharelato)
Instituto Politécnico de Coimbra Escola Superior Agrária de Coimbra, Portugal
2022 - 2023 Ants as pets: How the recent increase in trading ants as pets could affect naïve environments
Orientador de Harry Brindle
Bachelor in International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2021 - 2023 Adaptations of Soil Organisms to Extreme Conditions of a Geothermal Field
Orientador de Mariana Nunes
Ecologia (Mestrado)
Universidade de Coimbra, Portugal
2021 - 2023 Evaluating Soil Macrofauna Using Morphological and DNA Approaches Along a Gradient of Farming Intensification
Orientador de Luísa Fraga Dornellas Cysnieros
International Master in Applied Ecology (Mestrado)
Universidade de Coimbra, Portugal
2021 - 2023 Population differentiation and contrasting demographic histories of the Natal Multimammate mouse (Mastomys natalensis)
Orientador de Sofia Ramos
Mestrado em Recursos Biológicos, Valorização do Território e Sustentabilidade (Mestrado)
Universidade de Coimbra, Portugal
2021 - 2022 Evaluating the Impacts of Anaerobic Digestate Applications on Soil Nutrients and Macrofauna in South Wales
Orientador de Denagamage Gayashini Preksha Sammani
Master of Science in Wildlife Conservation and Management (Mestrado)
University of South Wales School of Applied Sciences, Reino Unido
2021 - 2022 Novel genomic resources for the lesser red musk shrew (Crocidura hirta): characterization and phylogenetic analysis of the complete mitochondrial genome and development of microsatellite markers.
Orientador de Dominika Mikova
BSc International Wildlife Biology (Hons) (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2021 - 2022 Mapping Muroids: The Complete Mitochondrial Genome and SSR panel of the African Pouched Mouse (Saccostomus Campestris)
Orientador de Fleurtje Coppen
BSc International Wildlife Biology (Hons) (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2021 - 2022 Conservation and the African Wild Dog (Lycaon pictus): Factors Threatening and Protecting the Species
Orientador de Taylor Ball
BSc (Hons) Animal Health and Welfare (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2020 - 2021 The effect of bio-based fertilisers on soil carbon and soil fauna: a case-scenario in Irish agricultural soils
Orientador de Mary Kate Doherty
MSc in Wildlife Conservation (Mestrado)
University of South Wales - Glyntaff Campus, Reino Unido
2020 - 2021 Using the Full Mitochondrial Genome for Detangling Giraffes, Giraffa camelopardalis, Genetic Diversity
Orientador de Saffron Rosier
Bachelor of Science in International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2020 - 2021 Developing in silico microsatellite markers for the Utila Spiny-Tailed Iguana, Ctenosaura bakeri.
Orientador de Santenay Lucy Ayers
BSc (Hons) International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2019 - 2021 Measuring Changes in Apis Mellifera Gut Microbiome Composition after Pesticide Exposure
Orientador de Yevheniia Shcheka
International Master in Applied Ecology (Mestrado)
Universidade de Coimbra, Portugal
2020 - 2020 Identification and characterisation of Pc53 - Pontoscolex corethrurus P53 gene homolog
Orientador de Lukasz Sitko
Bachelor of Science in Medical Sciences (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2019 - 2020 The Complete mitochondrial Genome of the Utila Spiny-tailed Iguana (Ctenosaura bakeri): Structure, Gene Content and phylogenetic positioning
Orientador de Emily Bellamey-Todd
International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2019 - 2020 Treasures in a Mermaid's Purse: Using egg capsules as a non-invasive approach to assessing genetic diversity in oviparous Chondrichthyes
Orientador de Callum Shaw
International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2019 - 2020 Culicidae diversity and abundance along a disturbance gradient
Orientador de Jia Wei Lee
International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2019 - 2020 A review of the conservation status of hedgehogs in the United Kingdom
Orientador de Danielle Oliver
International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2018 - 2020 The abundance and distribution of the endemic Phyllodactylus palmeus and the invasive Hemidactylus frenatus on the island of Utila, Honduras
Orientador de Emma Davies
Wildlife and Conservation Management
University of South Wales School of Applied Sciences, Reino Unido
2016 - 2020 Relationship between Pontoscolex corethrurus and soil fertility: the case of the Amazonian Dark Earths
Coorientador de Talita Ferreira
Agronomy (Doutoramento)
Universidade Federal do Paraná, Brasil
2018 - 2019 A Review on the Methods Used to Evaluate Dietary Composition in Spiders
Orientador de Thomas Reed
Natural History (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 The Utility of Environmental DNA for Soil Biodiversity Monitoring
Orientador de Kairan Leonard
International Wildlife Biology (Licenciatura/Bacharelato)
University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 Spatial and environmental effects on the abundance and diversity of carabid species in an ancient woodland
Orientador de Simon Peacock
Wildlife and Conservation Management (Mestrado)
University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 How Consumer Trends Change Farmer’s Land Management Practices
Orientador de Thomas Severn
Wildlife and Conservation Management (Mestrado)
University of South Wales School of Applied Sciences, Reino Unido
2017 - 2019 Soil Macroinvertebrates and Soil Quality in Amazonian Dark Earths and Adjacent Soils
Coorientador de Wilian Demetrio
Agronomy (Doutoramento)
Universidade Federal do Paraná, Brasil
2016 - 2018 Biodiversity of edaphic fauna in Amazonian Dark Earths
Coorientador de Carol Conrado
Agronomy (Mestrado)
Universidade Federal do Paraná, Brasil
2015 - 2017 Chemical and Physical of Amazonian Dark Earth Soils
Coorientador de Rodrigo Feijo Segalla
Agronomy (Mestrado)
Universidade Federal do Paraná, Brasil
2015 - 2017 Greenhouse gas emissions and soil chemical transformation by the earthworm Rhinodrilus alatus
Coorientador de Alessandra Santos
Agronomy (Mestrado)
Universidade Federal do Paraná, Brasil
2013 - 2014 Investigation into the extent of genetic variability and diversity of Aporrectodea caliginosa in samples from the Azorean Island of Sao Miguel
Orientador de Hayley Trestail
Biology (Licenciatura/Bacharelato)
Cardiff University Cardiff School of Biosciences, Reino Unido
2013 - 2014 Assessment of soil and tissue metal levels in earthworms from Flat Holm
Orientador de Charlotte Webber
Biology
Cardiff University Cardiff School of Biosciences, Reino Unido
2013 - 2014 Assessment of genetic variability and diversity of Lumbricus rubellus from Flat Holm
Orientador de Angharad Welham
Biology (Licenciatura/Bacharelato)
Cardiff University Cardiff School of Biosciences, Reino Unido
2012 - 2013 Mitochondrial activity in Pontoscolex corethrurus exposed to natural and anthropogenic stress
Orientador de Hugo Arruda
Biology (Licenciatura/Bacharelato)
Universidade dos Açores, Portugal

Organização de evento

Nome do evento
Tipo de evento (Tipo de participação)
Instituição / Organização
2015 - Atual 1st Workshop on Volcanic environments and their impact on biological organisms, December 2010 (2010)
Oficina (workshop) (Presidente da Comissão Organizadora)
Universidade dos Açores, Portugal
2008 - Atual 43rd EMBS, European Marine Biology Symposium, Ponta Delgada, Portugal. (2008)
Simpósio (Membro da Comissão Organizadora)
Universidade dos Açores, Portugal
2024/02/20 - 2024/02/22 1st BENCHMARKS Annual Meeting (2024/02)
Encontro (Presidente da Comissão Organizadora)
Universidade de Coimbra, Portugal
2024/02/19 - 2024/02/19 BENCHMARKS Sampling Training Workshop (2024/02/19)
Oficina (workshop) (Presidente da Comissão Organizadora)
Universidade de Coimbra, Portugal
2023/11/07 - 2023/11/07 BENCHMARKS Workshop "Healthy Soils for a Resilient Forest": This event aimed to engage participants in discussions and activities focused on promoting healthy soil for resilient agriculture. The agenda was structured to maximise interaction, knowledge exchange, and the development of practical solutions for soil health improvement. (2023/11/07 - 2023/11/07)
Oficina (workshop) (Presidente da Comissão Organizadora)
Universidade de Coimbra, Portugal
2023/07/14 - 2023/07/14 BENCHMARKS Workshop "Healthy Soils for a Resilient Agriculture": The event was structured to address the importance of maintaining healthy soil for resilient agriculture through a series of activities and presentations aimed at fostering dialogue and collaboration among stakeholders from various sectors. (2023/07/14 - 2023/07/14)
Oficina (workshop) (Presidente da Comissão Organizadora)
Universidade de Coimbra, Portugal
2017 - 2017 3rd Workshop of Terra Preta do Índio – 21st Century Challenges Exploration and Concepts in Amazonia" Rio Branco, Brazil, October 2017 (2017)
Oficina (workshop) (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido
2017 - 2017 Leader of a Sampling Expedition between Lethem and Iwokrama Reserve to ten sites, on mature forests, which included five researchers (Guyana) (2017)
Outro (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido
2017 - 2017 Leader of a Sampling Expedition between Manaus, Amazonas and Pacaraima, Roraima to 30 sites, including forests in archaeological settings but also sites on mature forests, which included four researchers (Brazil). (2017 - 2017)
Outro (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido
2017 - 2017 Leader of a Sampling Expedition in Rio Madeira, Amazonas to 18 sites, including forests in Amazonian Dark Earths but also sites on primary forests, which included 5 researchers (Brazil). (2017 - 2017) Cardiff University Cardiff School of Biosciences, Reino Unido
2016 - 2016 2nd Workshop of Terra Preta do Índio - Using remote sensing in the study of Amazonian Ecosystems, Porto Velho, Brazil (2016)
Oficina (workshop) (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido
2016 - 2016 Leader of a Sampling Expedition between Porto Velho, Rondônia and Curitiba, Paraná to 28 sites, including forests in archaeological settings but also sites on primary forests, three researchers (Brazil). (2016 - 2016) Cardiff University Cardiff School of Biosciences, Reino Unido
2016 - 2016 Leader of the Sampling Expedition to three Archaeological Sites in Porto Velho, Rondônia, which included 6 international researchers, 12 local researchers (Brazil). (2016 - 2016)
Outro (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido
2015 - 2015 1st Workshop of Terra Preta do Índio - Engenheiros edáficos e fertilidade do solo, Curitiba, Brazil (2015)
Oficina (workshop) (Presidente da Comissão Organizadora)
Empresa Brasileira de Pesquisa Agropecuária, Brasil
2015 - 2015 5th ELAETAO - Encontro Latino Americano de Ecologia e Taxonomia de Oligoquetas, Curitiba Brazil (2015)
Simpósio (Coorganizador)
Universidade Positivo, Brasil
2015 - 2015 Leader of the Sampling Expedition to three Amazonian Dark Earths Sites in Santarém (Pará, Brazil), which included 7 international researchers, 8 local researchers (Brazil). (2015 - 2015) Cardiff University Cardiff School of Biosciences, Reino Unido
2013 - 2013 Leader of the 2nd Sampling Expedition to São Miguel Island (Azores Archipelago), which included 4 international researchers, 2 local researchers (Portugal). (2013 - 2013)
Outro (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido
2012 - 2012 Leader of the 1st Sampling Expedition to São Miguel Island (Azores Archipelago), which included 10 international researchers, 3 local researchers, 2 Master students and 1 undergraduate student (Portugal). (2012 - 2012)
Outro (Presidente da Comissão Organizadora)
Cardiff University Cardiff School of Biosciences, Reino Unido

Participação em evento

Descrição da atividade
Tipo de evento
Nome do evento
Instituição / Organização
2016 - 2016 Attendance to "EURAXESS LAC Meeting" in Rio de Janeiro (Brazil), to provide guidance on Marie Sklodowska-Curie fellowship applications. Euroaxess General Meeting
EURAXESS , Brasil
2016 - 2016 Attendance to "EURAXESS Meeting in Porto Alegre" (Brazil), to provide guidance on Marie Sklodowska-Curie fellowship applications. Euroaxess Meeting in Porto Alegre
EURAXESS , Brasil
2015 - 2015 Attendance to "Euro destinations" in Sao Paulo (Brazil), as an ambassador and consultant for the Marie Sklodowska-Curie Actions. Euro destinations

Júri de grau académico

Tema
Tipo de participação
Nome do candidato (Tipo de grau)
Instituição / Organização
2021/11 Population ecology and implications for conservation of Utila Spiny-tailed Iguana in Utila island Honduras
Arguente
Daisy Marion (Doutoramento)
University of South Wales - Glyntaff Campus, Reino Unido
2021/10 Measuring Changes in Apis Mellifera Gut Microbiome Composition after Pesticide Exposure
Orientador
Yevheniia Shcheka (Mestrado)
Universidade de Coimbra, Portugal
2021/03 Atributos Físicos e Químicos de Coprólitos de Minhocas Endogeicas
Arguente
Alessandra Santos (Doutoramento)
Universidade Federal do Paraná, Brasil

Arbitragem científica em revista

Nome da revista (ISSN) Editora
2018 - Atual Acta Amazonica (0044-5967) SciELO
2018 - Atual Integrative Zoology (1749-4877) Wiley (Blackwell Publishing)
2016 - Atual Revista Brasileira de Ciencia do Solo (1806-9657) Scielo
2015 - Atual Ecological Indicators (1470-160X) Elsevier
2011 - Atual Chemosphere (0045-6535) Elsevier
2010 - Atual Coral Reefs (1432-0975) Springer-Verlag
2009 - Atual Aquaculture Research (1365-2109) Wiley (Blackwell Publishing)

Comissão de avaliação

Descrição da atividade
Tipo de assessoria
Instituição / Organização Entidade financiadora
2019 - Atual Evaluator for Marie Sklodowska-Curie Individual Fellowships (MSCA-IF)
Avaliador
Research Executive Agency, Bélgica
2018 - Atual Evaluator for Newton Fund (http://www.newtonfund.ac.uk)
Avaliador
Newton Fund, Reino Unido

Curso / Disciplina lecionado

Disciplina Curso (Tipo) Instituição / Organização
2023 - Atual Biogeografia e Modelado Espacial Ecology (Curso de mestrado (conclusão do curso de especialização)) Universidade de Coimbra, Portugal
2022 - Atual Tópicos Avançados em Ecologia Aplicada Ecologia (Mestrado) Universidade de Coimbra, Portugal
2022 - Atual Curso de Campo em Ecossistemas Tropicais International Master in Applied Ecology Universidade de Coimbra, Portugal
2021 - Atual Curso de Campo em Ecossistemas Mediterrâneos Ecologia Aplicada (Mestrado integrado) Universidade de Coimbra, Portugal
2021 - Atual Ecotoxicologia e Avaliação do Risco Ecológico Ecologia Aplicada (Mestrado integrado) Universidade de Coimbra, Portugal
2020 - Atual Curso de Campo em Ecossistemas Mediterrâneos Ecologia (Mestrado) Universidade de Coimbra, Portugal
2020 - Atual Tópicos Avançados em Ecologia Aplicada International Master in Applied Ecology (Mestrado) Universidade de Coimbra, Portugal
2018 - 2019 Biological Research Skills Biomedical Sciences, Biology, International Wildlife Biology, Human Biology (Bachelor) University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 Conservation Genetics and Wildlife Management International Wildlife Biology (Bachelor) University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 Terrestrial and Aquatic Conservation Wildlife and Conservation Management (Master) University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 Big Game Tracking/African Biodiversity – Residential Field Trip (South Africa) International Wildlife Biology (Bachelor) University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 Marine and Freshwater Biology (BI3S25) Biology (Bachelor) University of South Wales School of Applied Sciences, Reino Unido
2018 - 2019 Evolutionary Botany and Zoology (BI1S105) Biology (Bachelor) University of South Wales School of Applied Sciences, Reino Unido

Entrevista (jornal / revista)

Descrição da atividade Jornal / Forum
2019 Earthworms: integral ecosystem engineers CORDIS web Forum
2019 Earthworms—integral ecosystem engineers phys.org
2016 The Volcanic Earthworm on Newsweek! The earthworm Pontoscolex corethrurus is an animal that has evolved to live in an extraordinary environment, a volcanic geothermal field in Sao Miguel Island, one of the nine Islands in Azores Archipelago. Newsweek
2016 An Azorean story that is over half a billion years old. Acoriano Oriental (Local Azorean Journal)

Membro de associação

Nome da associação Tipo de participação
2023 - Atual ERGA - The European Reference Genome Atlas Member
2019 - Atual British Ecological Society Member
2018 - Atual Marie Curie Alumni Association Member
2016 - Atual Terra Preta de Índio Network co-Director
2014 - Atual Global Soil Biodiversity Initiative Member
2012 - Atual Systematic Biology Society Member
2012 - Atual Society for the Study of Evolution Member
2010 - Atual International Society of Computational Biology Member
2008 - Atual SETAC Member
2005 - Atual IMAREST Member

Membro de comissão

Descrição da atividade
Tipo de participação
Instituição / Organização
2021/12 - Atual 20 Encontro Nacional de Ecologia
Membro
Sociedade Portuguesa de Ecologia, Portugal

Revisão ad hoc de artigos em revista

Nome da revista (ISSN) Editora
2023/06 - Atual Frontiers in Environmental Science (2296665X) Frontiers
2023 - Atual Environmental Processes (21987505) Springer
2022 - Atual SOIL Copernicus
2021 - Atual Diversity

Tutoria

Tópico Nome do aluno
2016 - 2016 Internship in science communication Glaucia Martins
Distinções

Prémio

2019 CEECIND/01986/2017 - Individual Call to Scientific Employment Stimulus
Fundação para a Ciência e a Tecnologia, Portugal

Título

2019 Elected Best Student Partnership (Lecturing) of University of South Wales
University of South Wales, Reino Unido
2018 Short-Listed for Best Lecturer of University of South Wales
University of South Wales, Reino Unido

Outra distinção

2015 Top 5 finalist of the 2015 Royal Geographical Society grant contest “Land Rover Bursary”
Royal Geographical Society, Reino Unido
2015 3rd Place in the PacBio SMRT grant contest
Pacific Biosciences Inc, Estados Unidos
2012 4rd Place for the best Business Idea with the project “GEOMARTEC
Governo dos Açores, Portugal
2011 Mexican Government Scholarship for advanced postgraduate studies
2008 Best poster Award, International Congress of Metals and Genetics (ICMG 2008)
Université Paris Descartes, França
2008 PhD Scholarship
Fundo Regional para a Ciência e Tecnologia, Portugal
2005 M.Sc. Scholarship
European Social Fund, Bélgica
2001 BSc scholarship