Ana Catarina Almeida Carregado e Martins Marques Pereira (7B1B-CE46-DE69)

Curriculum Vitae

Ana Catarina Almeida Carregado e Martins Marques Pereira

Ana Catarina Marques is interested in several areas of Natural Sciences with emphasis on Biological Sciences. She developed skills in Biochemistry, having experience in Microbiology and Computational Biology. Subjects of interest are, among others, Microbiology, Artificial Intelligence, Machine-Learning and Protein-Drug Interactions.

Identification

Personal identification

Full name: Ana Catarina Almeida Carregado e Martins Marques Pereira

Citation names

Catarina Marques-Pereira

Author identifiers

Ciência ID: 7B1B-CE46-DE69
ORCID iD: 0000-0001-6840-8991

Email addresses

amarques@cnc.uc.pt (Professional)
catarina.103@gmail.com (Personal)

Telephones

Mobile phone

962076915 (Personal)

Addresses

UC Biotech, Cantanhede- Coimbra, 3060-197, Cantanhede, Coimbra, Portugal (Professional)

Websites

http://www.moreiralab.com/ (Scholar)

Knowledge fields

Natural sciences - Biological Sciences - Biochemistry

Languages

Language	Speaking	Reading	Writing	Listening	Peer-review
Portuguese (Mother tongue)
English	Advanced (C1)	Proficiency (C2)	Advanced (C1)	Proficiency (C2)	Upper intermediate (B2)
French	Elementary (A2)	Intermediate (B1)	Elementary (A2)	Intermediate (B1)	Beginner (A1)
Spanish; Castilian	Upper intermediate (B2)		Elementary (A2)	Upper intermediate (B2)	Elementary (A2)

Education

	Degree	Classification
2020/11/01 - 2024/07/15 Ongoing	Biologia Experimental e Biomedicina (Doutoramento) Universidade de Coimbra, Portugal
2020/09/15 - 2023/07/15 Ongoing	Biologia Computacional (Mestrado integrado) Universidade de Coimbra, Portugal
2020/02/24 - 2020/02/28 Concluded	Computational Biology Course of the Doctoral Program in Experimental Biology and Biomedicine (PDBEB) (Curso de doutoramento (conclusão de unidades curriculares)) Major in Computational Biology CNC.IBILI, Portugal	18/20
2019/09/16 - 2020/01/08 Concluded	Introduction to Bioinformatics (Outros) Major in Integrated Master in Biomedical Engineering Universidade de Coimbra, Portugal	16/20
2017/09/11 - 2019/07/07 Concluded	Bioquímica (Mestrado integrado) Major in Biochemistry Universidade de Coimbra, Portugal "The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity" (THESIS/DISSERTATION)	18/20
2014/09/08 - 2017/07/06 Concluded	Biologia (Licenciatura) Major in Biology Universidade de Coimbra, Portugal	15/20
2011/09/11 - 2014/07/30 Concluded	High School (Ensino secundário) Major in Curso Científico-Humanístico de Ciências e Tecnologias Colégio da Imaculada Conceição, Portugal	16/20

Affiliation

Science

	Category Host institution	Employer
2020/03/02 - 2020/10/31	Contracted Researcher (Research)	CNC.IBILI, Portugal
	CNC.IBILI, Portugal
2019/07/01 - 2019/12/31	Contracted Researcher (Research)	Fundação para a Ciência e a Tecnologia, Portugal
	Universidade de Coimbra, Portugal
2017/08/24 - 2017/09/11	Research Trainee (Research)	Universidade de Coimbra, Portugal
	Universidade de Coimbra, Portugal
2016/06 - 2016/08	Research Trainee (Research)	Universidade de Coimbra, Portugal
	ABASTENA- Sociedade Abastecedora de Madeiras, Portugal

Positions / Appointments

	Category Host institution	Employer
2017/06/30 - 2017/07/17	Summer University Monitor	Universidade de Coimbra, Portugal
	Universidade de Coimbra, Portugal

Others

	Category Host institution	Employer
2020/11/01 - Current	PhD scholarship - 2020.07766.BD	Fundação para a Ciência e a Tecnologia, Portugal
	Universidade de Coimbra, Portugal

Projects

Grant

	Designation	Funders
2020/11/01 - Current	DSAIPA/DS/0118/2020 - Cutting-Edge Virus-Host Interactome Discovery: A Multi- Omics AI Driven Approach DSAIPA/DS/0118/2020 Research Fellow	Fundação para a Ciência e a Tecnologia Ongoing
2020/03/02 - Current	POCI-01-0145-FEDER-031356- Deep learning in the discovery of cancer medicines: a pipeline for the generation of new therapies POCI-01-0145-FEDER-031356 Research Fellow CNC.IBILI, Portugal	CNC.IBILI Ongoing
2019/07/01 - 2019/12/31	ERA-MIN/0002/2015 - Recognition of microbial functional communities and assessment of the mineralizing potential (bioleaching) for hightech critical metals ERA-MIN/0002/2015 Research Fellow Universidade de Coimbra, Portugal	Fundação para a Ciência e a Tecnologia Concluded

Outputs

Publications

Book chapter	Rosário-Ferreira, Nícia; Marques-Pereira, Catarina; Gouveia, Raquel P.; Mourão, Joana; Moreira, Irina S.. "Guardians of the Cell: State-of-the-Art of Membrane Proteins from a Computational Point-of-View". In Computational Design of Membrane Proteins, 3-28. Portugal: Springer US, 2021. Published • 10.1007/978-1-0716-1468-6_1 Preto, A.J.; Marques, Ana Catarina; Batista, S.J.; Bueschbell, Beatriz; Barreto, Carlos A.V.; Gaspar, Teresa; Pinheiro, Ian; et al. "Targeting GPCRs via Multi-platforms arrays and AI". 2021. Published • Assistant staff
Conference abstract	Marques, Ana Catarina; Manuel N. Pires; Nádia N. Pereira; Ana B. Caniceiro; Raquel P. Gouveia; Nícia Rosário-Ferreira; Irina S. Moreira. "SARS-CoV-2 membrane protein: from genomic data to structural new insights". Paper presented in Bioinformatic Open Days, 2021.
Conference poster	Marques, Ana Catarina (7B1B-CE46-DE69); Proença, Diogo Neves; Morais, Paula Vaconcelos. "The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity". Paper presented in Microbiotec´19, 2019.
Journal article	Nícia Rosário-Ferreira; Marques, Ana Catarina; Manuel Pires; Daniel Ramalhão; Nádia Pereira; Victor Guimarães; Vitor S Costa; Irina S Moreira. "The treasury chest of text-mining: piling available resources forpowerful biomedical text-mining". MDPI (2021): Submitted
Thesis / Dissertation	Marques, Ana. "The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity". Master, Universidade de Coimbra, 2019.
Working paper	Marques, Ana Catarina (7B1B-CE46-DE69); Proença, Diogo Neves; Morais, Paula Vaconcelos. 2021. "Genome sequences of Serratia strains revealed common genes in both serratomolides gene clusters.". https://pubmed.ncbi.nlm.nih.gov/33419369/.

Other

Other output

SARS-CoV-2 membrane protein: from genomic data to structural new insights. 2021. Catarina Marques-Pereira; Manuel Pires; Raquel Gouveia; Nadia Pereira; Ana Caniceiro; Nicia Rosário-Ferreira; Irina Moreira. https://doi.org/10.21203/rs.3.rs-702792/v1.
10.21203/rs.3.rs-702792/v1

Activities

Oral presentation

	Presentation title	Event name Host (Event location)
2019/03	The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity.	Microbiology class of Master in Biochemistry Universidade de Coimbra (Coimbra, Portugal)
2017/07	Presentation and demonstration - Technics in Palynology	Summer University 2017 Universidade de Coimbra (Coimbra, Portugal)

Event organisation

	Event name Type of event (Role)	Institution / Organization
2019/12/04 - 2019/12/07	Organization of the international conference on Microbiology- Microbiotec´19 from 4 to 7 December 2019, at the University of Coimbra. (2019/12/04 - 2019/12/07) Congress (Member of the Organising Committee)	Sociedade Portuguesa de Microbiologia, Portugal

Event participation

	Activity description Type of event	Event name Institution / Organization
2020/02/24 - 2020/02/28	Participation in the course "Computational Biology" of the doctoral program in Experimental Biology and Biomedicine (PDBEB). Workshop	"Computational Biology"- PDBEB CNC.IBILI, Portugal
2019/12/10 - 2019/12/10	Participation in the Workshop- R program developed by Alberto Coelho on December 10, 2019 at the Department of Life Sciences. Workshop	Workshop in R program Universidade de Coimbra, Portugal
2019/12/04 - 2019/12/07	Participation on the international conference of Microbiology- Microbiotec´19 from 4 to 7 December 2019, at the University of Coimbra. Conference	Microbiotec´19 Sociedade Portuguesa de Microbiologia, Portugal
2019/09/17 - 2019/09/17	Participation in the exhibition of Environmental Microbiology Laboratory during the Day of the Microorganism in September 17, 2019. Exhibition	Dia do Microorganismo Sociedade Portuguesa de Microbiologia, Portugal
2018/09/17 - 2018/09/17	Participation in the exhibition of Environmental Microbiology Laboratory during the Day of the Microorganism in September 17, 2018. Exhibition	Dia do Microorganismo Sociedade Portuguesa de Microbiologia, Portugal
2018/09/05 - 2018/09/14	Attendence in the Summer School in Computational Biology, held in September 2018, with a protein interaction simulation project. During the course participants learned programming in MATLAB and Python, as well as several techniques in Computational Biology. Workshop	Summer School in Computational Biology Universidade de Coimbra, Portugal
2016/04/27 - 2016/04/27	Attendence to the Human Evolution Lecture - New discoveries and their implications of NEB / AAC, on April 27, 2016 Other	Human Evolution Lecture - New discoveries and their implications Universidade de Coimbra, Portugal
2016/02/25 - 2016/02/25	Participation in the Workshop: Training English for Technical Reading, February 25, 2016 at the Department of Life Sciences. Workshop	Workshop- Training English for Technical Reading Universidade de Coimbra, Portugal
2016/02/15 - 2016/02/15	Attendence of Lecture with President of the Order of Biologists, on February 15, 2016. Other	Lecture with President of the Order of Biologists Universidade de Coimbra, Portugal
2015/12/03 - 2015/12/04	Participation in the IBILI Annual Meeting, from 3 to 4 December 2015 - "New trends in Biomedical research". Conference	New trends in Biomedical research CNC.IBILI, Portugal

Committee member

	Activity description Role	Institution / Organization
2017/03/19 - 2017/03/19	Secretariat on the general assembly of Abastena, on March 19, 2017. Coordinator	ABASTENA- Sociedade Abastecedora de Madeiras, Portugal

Mentoring / Tutoring

	Topic	Student name
2017/06/30 - 2017/07/17	Monitor of the Summer University 2017 of the University of Coimbra	15 participants from the Summer University Department of Life Sciences