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Ana Catarina Marques is interested in several areas of Natural Sciences with emphasis on Biological Sciences. She developed skills in Biochemistry, having experience in Microbiology and Computational Biology. Subjects of interest are, among others, Microbiology, Artificial Intelligence, Machine-Learning and Protein-Drug Interactions.
Identification

Personal identification

Full name
Ana Catarina Almeida Carregado e Martins Marques Pereira

Citation names

  • Catarina Marques-Pereira

Author identifiers

Ciência ID
7B1B-CE46-DE69
ORCID iD
0000-0001-6840-8991

Email addresses

  • amarques@cnc.uc.pt (Professional)
  • catarina.103@gmail.com (Personal)

Telephones

Mobile phone
  • 962076915 (Personal)

Addresses

  • UC Biotech, Cantanhede- Coimbra, 3060-197, Cantanhede, Coimbra, Portugal (Professional)

Websites

Knowledge fields

  • Natural sciences - Biological Sciences - Biochemistry

Languages

Language Speaking Reading Writing Listening Peer-review
Portuguese (Mother tongue)
English Advanced (C1) Proficiency (C2) Advanced (C1) Proficiency (C2) Upper intermediate (B2)
French Elementary (A2) Intermediate (B1) Elementary (A2) Intermediate (B1) Beginner (A1)
Spanish; Castilian Upper intermediate (B2) Elementary (A2) Upper intermediate (B2) Elementary (A2)
Education
Degree Classification
2020/11/01 - 2024/07/15
Ongoing
Biologia Experimental e Biomedicina (Doutoramento)
Universidade de Coimbra, Portugal
2020/09/15 - 2023/07/15
Ongoing
Biologia Computacional (Mestrado integrado)
Universidade de Coimbra, Portugal
2020/02/24 - 2020/02/28
Concluded
Computational Biology Course of the Doctoral Program in Experimental Biology and Biomedicine (PDBEB) (Curso de doutoramento (conclusão de unidades curriculares))
Major in Computational Biology
CNC.IBILI, Portugal
18/20
2019/09/16 - 2020/01/08
Concluded
Introduction to Bioinformatics (Outros)
Major in Integrated Master in Biomedical Engineering
Universidade de Coimbra, Portugal
16/20
2017/09/11 - 2019/07/07
Concluded
Bioquímica (Mestrado integrado)
Major in Biochemistry
Universidade de Coimbra, Portugal
"The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity" (THESIS/DISSERTATION)
18/20
2014/09/08 - 2017/07/06
Concluded
Biologia (Licenciatura)
Major in Biology
Universidade de Coimbra, Portugal
15/20
2011/09/11 - 2014/07/30
Concluded
High School (Ensino secundário)
Major in Curso Científico-Humanístico de Ciências e Tecnologias
Colégio da Imaculada Conceição, Portugal
16/20
Affiliation

Science

Category
Host institution
Employer
2020/03/02 - 2020/10/31 Contracted Researcher (Research) CNC.IBILI, Portugal
CNC.IBILI, Portugal
2019/07/01 - 2019/12/31 Contracted Researcher (Research) Fundação para a Ciência e a Tecnologia, Portugal
Universidade de Coimbra, Portugal
2017/08/24 - 2017/09/11 Research Trainee (Research) Universidade de Coimbra, Portugal
Universidade de Coimbra, Portugal
2016/06 - 2016/08 Research Trainee (Research) Universidade de Coimbra, Portugal
ABASTENA- Sociedade Abastecedora de Madeiras, Portugal

Positions / Appointments

Category
Host institution
Employer
2017/06/30 - 2017/07/17 Summer University Monitor Universidade de Coimbra, Portugal
Universidade de Coimbra, Portugal

Others

Category
Host institution
Employer
2020/11/01 - Current PhD scholarship - 2020.07766.BD Fundação para a Ciência e a Tecnologia, Portugal
Universidade de Coimbra, Portugal
Projects

Grant

Designation Funders
2020/11/01 - Current DSAIPA/DS/0118/2020 - Cutting-Edge Virus-Host Interactome Discovery: A Multi- Omics AI Driven Approach
DSAIPA/DS/0118/2020
Research Fellow
Fundação para a Ciência e a Tecnologia
Ongoing
2020/03/02 - Current POCI-01-0145-FEDER-031356- Deep learning in the discovery of cancer medicines: a pipeline for the generation of new therapies
POCI-01-0145-FEDER-031356
Research Fellow
CNC.IBILI, Portugal
CNC.IBILI
Ongoing
2019/07/01 - 2019/12/31 ERA-MIN/0002/2015 - Recognition of microbial functional communities and assessment of the mineralizing potential (bioleaching) for hightech critical metals
ERA-MIN/0002/2015
Research Fellow
Universidade de Coimbra, Portugal
Fundação para a Ciência e a Tecnologia
Concluded
Outputs

Publications

Book chapter
  1. Rosário-Ferreira, Nícia; Marques-Pereira, Catarina; Gouveia, Raquel P.; Mourão, Joana; Moreira, Irina S.. "Guardians of the Cell: State-of-the-Art of Membrane Proteins from a Computational Point-of-View". In Computational Design of Membrane Proteins, 3-28. Portugal: Springer US, 2021.
    Published • 10.1007/978-1-0716-1468-6_1
  2. Preto, A.J.; Marques, Ana Catarina; Batista, S.J.; Bueschbell, Beatriz; Barreto, Carlos A.V.; Gaspar, Teresa; Pinheiro, Ian; et al. "Targeting GPCRs via Multi-platforms arrays and AI". 2021.
    Published • Assistant staff
Conference abstract
  1. Marques, Ana Catarina; Manuel N. Pires; Nádia N. Pereira; Ana B. Caniceiro; Raquel P. Gouveia; Nícia Rosário-Ferreira; Irina S. Moreira. "SARS-CoV-2 membrane protein: from genomic data to structural new insights". Paper presented in Bioinformatic Open Days, 2021.
Conference poster
  1. Marques, Ana Catarina (7B1B-CE46-DE69); Proença, Diogo Neves; Morais, Paula Vaconcelos. "The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity". Paper presented in Microbiotec´19, 2019.
Journal article
  1. Nícia Rosário-Ferreira; Marques, Ana Catarina; Manuel Pires; Daniel Ramalhão; Nádia Pereira; Victor Guimarães; Vitor S Costa; Irina S Moreira. "The treasury chest of text-mining: piling available resources forpowerful biomedical text-mining". MDPI (2021):
    Submitted
Thesis / Dissertation
  1. Marques, Ana. "The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity". Master, Universidade de Coimbra, 2019.
Working paper
  1. Marques, Ana Catarina (7B1B-CE46-DE69); Proença, Diogo Neves; Morais, Paula Vaconcelos. 2021. "Genome sequences of Serratia strains revealed common genes in both serratomolides gene clusters.". https://pubmed.ncbi.nlm.nih.gov/33419369/.

Other

Other output
  1. ­­SARS-CoV-2 membrane protein: from genomic data to structural new insights. 2021. Catarina Marques-Pereira; Manuel Pires; Raquel Gouveia; Nadia Pereira; Ana Caniceiro; Nicia Rosário-Ferreira; Irina Moreira. https://doi.org/10.21203/rs.3.rs-702792/v1.
    10.21203/rs.3.rs-702792/v1
Activities

Oral presentation

Presentation title Event name
Host (Event location)
2019/03 The role of Serratomolides produced by bacteria of genus Serratia in nematicidal activity. Microbiology class of Master in Biochemistry
Universidade de Coimbra (Coimbra, Portugal)
2017/07 Presentation and demonstration - Technics in Palynology Summer University 2017
Universidade de Coimbra (Coimbra, Portugal)

Event organisation

Event name
Type of event (Role)
Institution / Organization
2019/12/04 - 2019/12/07 Organization of the international conference on Microbiology- Microbiotec´19 from 4 to 7 December 2019, at the University of Coimbra. (2019/12/04 - 2019/12/07)
Congress (Member of the Organising Committee)
Sociedade Portuguesa de Microbiologia, Portugal

Event participation

Activity description
Type of event
Event name
Institution / Organization
2020/02/24 - 2020/02/28 Participation in the course "Computational Biology" of the doctoral program in Experimental Biology and Biomedicine (PDBEB).
Workshop
"Computational Biology"- PDBEB
CNC.IBILI, Portugal
2019/12/10 - 2019/12/10 Participation in the Workshop- R program developed by Alberto Coelho on December 10, 2019 at the Department of Life Sciences.
Workshop
Workshop in R program
Universidade de Coimbra, Portugal
2019/12/04 - 2019/12/07 Participation on the international conference of Microbiology- Microbiotec´19 from 4 to 7 December 2019, at the University of Coimbra.
Conference
Microbiotec´19
Sociedade Portuguesa de Microbiologia, Portugal
2019/09/17 - 2019/09/17 Participation in the exhibition of Environmental Microbiology Laboratory during the Day of the Microorganism in September 17, 2019.
Exhibition
Dia do Microorganismo
Sociedade Portuguesa de Microbiologia, Portugal
2018/09/17 - 2018/09/17 Participation in the exhibition of Environmental Microbiology Laboratory during the Day of the Microorganism in September 17, 2018.
Exhibition
Dia do Microorganismo
Sociedade Portuguesa de Microbiologia, Portugal
2018/09/05 - 2018/09/14 Attendence in the Summer School in Computational Biology, held in September 2018, with a protein interaction simulation project. During the course participants learned programming in MATLAB and Python, as well as several techniques in Computational Biology.
Workshop
Summer School in Computational Biology
Universidade de Coimbra, Portugal
2016/04/27 - 2016/04/27 Attendence to the Human Evolution Lecture - New discoveries and their implications of NEB / AAC, on April 27, 2016
Other
Human Evolution Lecture - New discoveries and their implications
Universidade de Coimbra, Portugal
2016/02/25 - 2016/02/25 Participation in the Workshop: Training English for Technical Reading, February 25, 2016 at the Department of Life Sciences.
Workshop
Workshop- Training English for Technical Reading
Universidade de Coimbra, Portugal
2016/02/15 - 2016/02/15 Attendence of Lecture with President of the Order of Biologists, on February 15, 2016.
Other
Lecture with President of the Order of Biologists
Universidade de Coimbra, Portugal
2015/12/03 - 2015/12/04 Participation in the IBILI Annual Meeting, from 3 to 4 December 2015 - "New trends in Biomedical research".
Conference
New trends in Biomedical research
CNC.IBILI, Portugal

Committee member

Activity description
Role
Institution / Organization
2017/03/19 - 2017/03/19 Secretariat on the general assembly of Abastena, on March 19, 2017.
Coordinator
ABASTENA- Sociedade Abastecedora de Madeiras, Portugal

Mentoring / Tutoring

Topic Student name
2017/06/30 - 2017/07/17 Monitor of the Summer University 2017 of the University of Coimbra 15 participants from the Summer University Department of Life Sciences