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Catarina has a PhD in Marine Biology (2015) from Victoria University of Wellington, New Zealand, a MSc in Coastal and Oceanic Systems (2011) from Universidade Federal do Paraná, Brazil, and a BSc in Biology (2008) from Universidade de Aveiro, Portugal. Currently she is a Researcher at Universidade de Coimbra, Portugal, and an Adjunct Research Fellow at James Cook University, Australia. Her research has mainly focused on applying multidisciplinary and innovative methods to fisheries research, understanding the processes related to marine population dynamics and also addressing fundamental questions in ecology and evolutionary biology. Since 2021, she has been collaborating with academic institutions (e.g. Nature Research Center, Lithuania, and University of Tasmania, Australia), private companies (Deeper® and Angler’s Atlas®) and Non-Profit Organisations (Fishial) to develop innovative, open-source tools and methods for recreational fisheries data collection and analyses, including using machine learning models to identify fish species and sizes from images. She is a co-founder of the Fish AI Consortium (https://fishaiconsortium.org/), an international initiative that aims to bring together people with an interest in developing and using artificial intelligence tools to study fish population management, ecology and conservation.
Identificação

Identificação pessoal

Nome completo
Catarina Nunes Soares Silva

Nomes de citação

  • Silva, Catarina NS

Identificadores de autor

Ciência ID
8711-E3A8-F954
ORCID iD
0000-0001-9401-2616

Endereços de correio eletrónico

  • catari.bio@gmail.com (Profissional)
  • catarina.silva@jcu.edu.au (Profissional)
  • catarina.s.silva@uc.pt (Profissional)

Websites

Domínios de atuação

  • Ciências Agrárias - Agricultura, Silvicultura e Pescas - Pescas
  • Ciências Naturais - Ciências Biológicas - Genética e Hereditariedade
  • Ciências Exatas - Ciências da Computação e da Informação - Bioinformática
  • Ciências Naturais - Ciências Biológicas - Biologia da Evolução das Espécies
  • Ciências Naturais - Ciências Biológicas - Biologia Marinha

Idiomas

Idioma Conversação Leitura Escrita Compreensão Peer-review
Português (Idioma materno)
Inglês Utilizador proficiente (C1) Utilizador proficiente (C2) Utilizador proficiente (C2) Utilizador proficiente (C2)
Espanhol; Castelhano Utilizador independente (B2) Utilizador proficiente (C1) Utilizador elementar (A2) Utilizador independente (B2)
Francês Utilizador elementar (A1) Utilizador elementar (A2) Utilizador elementar (A1) Utilizador elementar (A1)
Formação
Grau Classificação
2020/01 - 2021/03
Concluído
The Data Science Course 2021: Complete Data Science Bootcamp (Outros)
Udemy Inc, Estados Unidos
2020/09 - 2020/09
Concluído
R for Reproducible Scientific Analysis (Outros)
Queensland Cyber Infrastructure Foundation, Austrália
2020/01 - 2020/08
Concluído
Project Management Foundations (Outros)
LinkedIn Learning, Estados Unidos
2019/03 - 2019/03
Concluído
Media training intensive course (Outros)
Science in Public Pty Ltd, Austrália
2018/06 - 2018/06
Concluído
Design of breeding programs with genomic selection (CGIL Summer Course) (Outros)
University of Guelph, Canadá
2017/11 - 2017/11
Concluído
Landscape genomics (Outros)
Physalia Courses, Alemanha
2017/07 - 2017/07
Concluído
Advising Research Higher Degree Candidates training course (Outros)
James Cook University, Austrália
2016/01 - 2016/01
Concluído
Workshop on Genomics (Outros)
Evomics.org, República Checa
2015/09 - 2015/10
Concluído
Gene mapping course (Outros)
Helsingin yliopisto, Finlândia
2011 - 2015
Concluído
Doctor in Philosophy (Doctor of Philosophy)
Especialização em Marine Biology
Victoria University of Wellington, Nova Zelândia
"Spatial and temporal genetic structure of the New Zealand scallop Pecten novaezelandiae: A multidisciplinary perspective " (TESE/DISSERTAÇÃO)
Approved by Unanimity
2011/01
Concluído
Sistemas Costeiros e Oceânicos (Master Universitario)
Especialização em Fisheries Management
Universidade Federal do Paraná, Brasil
"Efficiency of Bycatch reduction devices in a Brazilian artisanal penaeid-trawl fishery" (TESE/DISSERTAÇÃO)
A
2008
Concluído
Biologia (Licenciatura)
Universidade de Aveiro, Portugal
"Characterisation of fish resources in Aveiro region" (TESE/DISSERTAÇÃO)
15
Percurso profissional

Ciência

Categoria Profissional
Instituição de acolhimento
Empregador
2023/05 - Atual Investigador Auxiliar (carreira) (Investigação) Universidade de Coimbra, Portugal
Universidade de Coimbra Centre for Functional Ecology - Science for People & the Planet, Portugal
2021/10 - 2022/11 Investigador Contratado (Investigação) Gamtos tyrimr centras, Lituânia
2021/01 - 2021/10 Investigador (Investigação) Associação Laboratório Colaborativo em Transformação Digital, Portugal
2017/03 - 2020/12 Pós-doutorado (Investigação) James Cook University, Austrália
2015/09 - 2017/02 Pós-doutorado (Investigação) Helsingin yliopisto, Finlândia
2015/02 - 2015/07 Investigador (Investigação) Victoria University of Wellington, Nova Zelândia
2011/03 - 2011/07 Assistente de Investigação (carreira) (Investigação) Universidade Federal do Paraná, Brasil
2008/01 - 2008/06 Estagiário de Investigação (Investigação) Instituto de Investigacións Mariñas, Espanha

Docência no Ensino Superior

Categoria Profissional
Instituição de acolhimento
Empregador
2012/07 - 2015/05 Assistente (Docente Universitário) Victoria University of Wellington, Nova Zelândia
2010/06 - 2010/06 Assistente Convidado (Docente Universitário) Universidade Federal do Paraná, Brasil

Outros

Categoria Profissional
Instituição de acolhimento
Empregador
2021/01 - Atual Adjunct Research Fellow James Cook University, Austrália
2023/02 - 2023/05 Data Science Consultant Laboratório Colaborativo para o Atlântico, Portugal
Projetos

Bolsa

Designação Financiadores
2024/01 - 2027/12 REDUCE - Reducing bycatch of threatened megafauna in the east-central Atlantic
Co-Investigador Responsável (Co-IR)
Universidade de Coimbra, Portugal
Horizon 2020
2023/09 - 2024/02 The effects of citizen science image quality on deep learning models for fish species classification
2022.38089.CPCA.A0
Investigador responsável
Universidade de Coimbra, Portugal
Rede Nacional de Computação Avançada
Em curso
2011 - 2015 Multi-species analysis of coastal marine connectivity
ZBD2009-10
Bolseiro de Doutoramento
Victoria University of Wellington, Nova Zelândia
New Zealand Ministry for Primary Industries
Concluído
2011 - 2015 Multi-species analysis of coastal marine connectivity
ZBD2009-10
New Zealand Ministry for Primary Industries

Projeto

Designação Financiadores
2023/05 - Atual Harnessing the power of artificial intelligence and citizen science for assessing fish populations status
2022.01002.CEECIND
Investigador
Fundação para a Ciência e a Tecnologia
Em curso
2021/10 - 2022/12 Advanced models, citizen science and big data for sustainable food production and ecological services of inland aquatic ecosystems
Investigador
Gamtos tyrimr centras, Lituânia
European Regional Development Fund
2021/01 - 2021/10 Contratação de Recursos Humanos Altamente Qualificados
NORTE-59-2018-41
Investigador
Associação Laboratório Colaborativo em Transformação Digital, Portugal
European Social Fund
2018 - 2020 Testing established methods of early prediction of genetic merit in abalone broodstock
Co-investigator
James Cook University, Austrália
Australian Government Fisheries Research and Development Corp
Em curso
2017 - 2020 Lost at sea? Understanding adaptation and dispersal in spiny lobsters
Bolseiro de Pós-Doutoramento
James Cook University, Austrália
Australian Research Council
Concluído
2017 - 2019 Increasing knowledge of Victoria´s growing recreational yellowtail kingfish fishery
14/15/Large/34
Bolseiro de Pós-Doutoramento
James Cook University, Austrália
Victorian Fisheries Authority
Concluído
2017/04 - 2018/09 Genetic diversity audit of farm held stocks of Greenlip and Blacklip abalone
Bolseiro de Pós-Doutoramento
James Cook University, Austrália
Australian Government Fisheries Research and Development Corp
Concluído
2015/09 - 2017/02 Genomics of adaptation to environmental change in two wild bird populations
Investigador Pós-doutorado
Helsingin yliopisto, Finlândia
Norges forskningsråd
2015 - 2015 Testing techniques for tracing the provenance of green-lipped mussel spat washed up on Ninety Mile Beach
Investigador
Victoria University of Wellington, Nova Zelândia
New Zealand Ministry for Primary Industries
2008/01 - 2008/07 Recovery of endangered species: Biological aspects of natural populations of the iberoatlantic coast and reproduction in captivity of the seahorse Hippocampus guttulatus
CGL2005-05927-C03-01
Bolseiro de Iniciação Científica
Instituto de Investigacións Mariñas, Espanha
España Ministerio de Ciencia e Innovación
Concluído

Outro

Designação Financiadores
2022 - Atual COST Action - SEA-UNICORN (CA19107)
Investigador
2019/01 - 2021/12 Dating West Antarctic ice sheet collapse using molecular sequence data
Orientador
James Cook University, Austrália
Australian Research Council
Concluído
2019 - 2020 Australian Research Council Industrial Transformation Research Hub for Advanced Prawn Breeding
Orientador
James Cook University, Austrália
Australian Research Council
Concluído
2018 - 2018 Tropical Rock Oyster Aboriginal Economic Development Program
N/A
Orientador
James Cook University, Austrália
Northern Territory Government of Australia
Concluído
2013 - 2013 Rede vida: uso de dispositivos tecnológicos para a redução dos descartes da pesca artesanal de arrasto de camarões do litoral do Paraná
732/12
External Collaborator
Universidade Federal do Paraná, Brasil
Pró-Reitoria de Extensão e Cultura da Universidade Federal do Paraná
Concluído
Produções

Publicações

Artigo em revista
  1. Sally C. Y. Lau; Nerida G. Wilson; Nicholas R. Golledge; Tim R. Naish; Phillip C. Watts; Catarina N. S. Silva; Ira R. Cooke; et al. "Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial". Science 382 6677 (2023): 1384-1389. https://www.science.org/doi/10.1126/science.ade0664.
    Publicado
  2. Sally C. Y. Lau; Jan M. Strugnell; Chester J. Sands; Catarina N. S. Silva; Nerida G. Wilson. "Genomic insights of evolutionary divergence and life histories innovations in Antarctic brittle stars". Molecular Ecology (2023): https://doi.org/10.1111/mec.16951.
    10.1111/mec.16951
  3. Catarina N. S. Silva; Justas Dainys; Sean Simmons; Vincentas Vienožinskis; Asta Audzijonyte. "A Scalable Open-Source Framework for Machine Learning-Based Image Collection, Annotation and Classification: A Case Study for Automatic Fish Species Identification". Sustainability (2022): https://doi.org/10.3390/su142114324.
    10.3390/su142114324
  4. Nga T. T. Vu; Kyall R. Zenger; Jarrod L. Guppy; Melony J. Sellars; Silva, Catarina NS; Shannon R. Kjeldsen; Dean R. Jerry. "Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis". BMC Genomics 22 1 (2021): http://dx.doi.org/10.1186/s12864-021-07794-w.
    10.1186/s12864-021-07794-w
  5. Sally C. Y. Lau; Jan M. Strugnell; Chester J. Sands; Catarina N. S. Silva; Nerida G. Wilson. "Evolutionary innovations in Antarctic brittle stars linked to glacial refugia". Ecology and Evolution (2021): https://doi.org/10.1002/ece3.8376.
    10.1002/ece3.8376
  6. Nga T T Vu; Kyall R Zenger; Silva, Catarina; Jarrod L Guppy; Dean R Jerry. "Population Structure, Genetic Connectivity, and Signatures of Local Adaptation of the Giant Black Tiger Shrimp (Penaeus monodon) throughout the Indo-Pacific Region". Genome Biology and Evolution 13 10 (2021): http://dx.doi.org/10.1093/gbe/evab214.
    10.1093/gbe/evab214
  7. Phoebe M. Arbon; Catarina N.S. Silva; David B. Jones; Damian Jaccoud; Mark Gervis; Dean R. Jerry; Jan M. Strugnell. "Development and validation of a SNP-based genotyping tool for pedigree establishment in Australian greenlip abalone Haliotis laevigata Donovan, 1808". Aquaculture Reports 20 (2021): 100746-100746. https://doi.org/10.1016/j.aqrep.2021.100746.
    10.1016/j.aqrep.2021.100746
  8. Gardner, Jonathan P. A.; Silva, Catarina N. S.; Norrie, Craig R.; Dunphy, Brendon J.. "Combining genotypic and phenotypic variation in a geospatial framework to identify sources of mussels in northern New Zealand". Scientific Reports 11 1 (2021): http://dx.doi.org/10.1038/s41598-021-87326-4.
    10.1038/s41598-021-87326-4
  9. Catarina N. S. Silva; Emma F. Young; Nicholas P. Murphy; James J. Bell; Bridget S. Green; Simon A. Morley; Guy Duhamel; Andrew C. Cockcroft; Jan M. Strugnell. "Climatic change drives dynamic source–sink relationships in marine species with high dispersal potential". Ecology and Evolution (2021): https://doi.org/10.1002/ece3.7204.
    10.1002/ece3.7204
  10. Catarina N.S. Silva; Nicholas P. Murphy; James J. Bell; Bridget S. Green; Guy Duhamel; Andrew C. Cockcroft; Cristián E. Hernández; Jan M. Strugnell. "Global drivers of recent diversification in a marine species complex". Molecular Ecology (2021): https://doi.org/10.1111/mec.15780.
    10.1111/mec.15780
  11. Sally C. Y. Lau; Nerida G. Wilson; Catarina N. S. Silva; Jan M. Strugnell. "Detecting glacial refugia in the Southern Ocean". Ecography (2020): https://doi.org/10.1111/ecog.04951.
    10.1111/ecog.04951
  12. Vu, N.T.T.; Zenger, K.R.; Guppy, J.L.; Sellars, M.J.; Silva, C.N.S.; Kjeldsen, S.R.; Jerry, D.R.. "Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis". BMC Genomics 21 1 (2020): http://www.scopus.com/inward/record.url?eid=2-s2.0-85092253244&partnerID=MN8TOARS.
    10.1186/s12864-020-07084-x
  13. Catarina N. S. Silva; Cecilia Villacorta-Rath; Laura N. Woodings; Nicholas P. Murphy; Bridget S. Green; Klaas Hartmann; Caleb Gardner; James J. Bell; Jan M. Strugnell. "Advancing our understanding of the connectivity, evolution and management of marine lobsters through genetics". Reviews in Fish Biology and Fisheries 29 3 (2019): 669-687. https://doi.org/10.1007/s11160-019-09573-z.
    10.1007/s11160-019-09573-z
  14. Samantha J. Nowland; Catarina N. S. Silva; Paul C. Southgate ; Jan M. Strugnell. "Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development". BMC Genomics 20 1 (2019): http://dx.doi.org/10.1186/s12864-019-6052-z.
    Acesso aberto • 10.1186/s12864-019-6052-z
  15. Catarina NS Silva; Helen S Macdonald; Mark G Hadfield; Martin Cryer; Jonathan P A Gardner. "Ocean currents predict fine-scale genetic structure and source-sink dynamics in a marine invertebrate coastal fishery". ICES Journal of Marine Science 76 4 (2019): 1007-1018. http://dx.doi.org/10.1093/icesjms/fsy201.
    10.1093/icesjms/fsy201
  16. Kosch, T. A.; Silva, C. N. S.; Brannelly, L. A.; Roberts, A. A.; Lau, Q.; Marantelli, G.; Berger, L.; Skerratt, L. F.. "Genetic potential for disease resistance in critically endangered amphibians decimated by chytridiomycosis". Animal Conservation 22 3 (2018): 238-250. http://dx.doi.org/10.1111/acv.12459.
    10.1111/acv.12459
  17. C N S Silva; S E McFarlane; I J Hagen; L Rönnegård; A M Billing; T Kvalnes; P Kemppainen; et al. "Insights into the genetic architecture of morphological traits in two passerine bird species". Heredity 119 3 (2017): 197-205. https://doi.org/10.1038/hdy.2017.29.
    10.1038/hdy.2017.29
  18. Catarina Nunes Soares Silva; Jonathan P A Gardner. "Identifying environmental factors associated with the genetic structure of the New Zealand scallop: linking seascape genetics and ecophysiological tolerance". ICES Journal of Marine Science 73 7 (2016): 1925-1934.
    10.1093/icesjms/fsv240
  19. Planas, Miquel; Silva, Catarina; Quintas, Patricia; Chamorro, Alexandro; Piñero, Sonia. "Ongrowing and enhancement of n-3 HUFA profile in adult Artemia: short- vs long-time enrichment". Journal of Applied Phycology (2016): http://dx.doi.org/10.1007/s10811-016-1016-z.
    10.1007/s10811-016-1016-z
  20. Silva, Catarina N. S.; Gardner, Jonathan P. A.. "Emerging patterns of genetic variation in the New Zealand endemic scallop Pecten novaezelandiae". Molecular Ecology (2015): n/a-n/a.
    10.1111/mec.13404
  21. Silva, Catarina N. S.; Gardner, Jonathan P. A.. "Development and characterisation of 12 microsatellite markers for the New Zealand endemic scallop Pecten novaezelandiae". Conservation Genetics Resources 6 2 (2014): 327-328.
    10.1007/s12686-013-0085-4
  22. Silva, Catarina N. S.; Broadhurst, Matt K.; Medeiros, Rodrigo P.; Dias, José H.. "Resolving environmental issues in the southern Brazilian artisanal penaeid-trawl fishery through adaptive co-management". Marine Policy 42 0 (2013): 133-141.
    10.1016/j.marpol.2013.02.002
  23. Medeiros, R.P.; Guanais, J.H.D.G.; Santos, L.O.; Spach, H.L.; Silva, C.N.S.; Foppa, C.C.; Cattani, A.P.; Rainho, A.P.. "Strategies for bycatch reduction at small-scale shrimp trawl fishing: Perspectives for fisheries management". Boletim do Instituto de Pesca 39 3 (2013): 339-358. http://www.scopus.com/inward/record.url?eid=2-s2.0-84884829436&partnerID=MN8TOARS.
    10.20950/1678-2305.2013v39n3p339
  24. Medeiros, R. P.; Guanais, Jhdg; Santos, L. de O.; Spach, H. L.; Silva, C. N. S.; Foppa, C. C.; Cattani, A. P.; Rainho, A. P.. "Estratégias Para a Redução Da Fauna Acompanhante Na Frota Artesanal De Arrasto Do Camarão Sete-Barbas: Perspectivas Para a Gestão Pesqueira". Boletim do Instituto de Pesca 39 3 (2013): 339-358.
  25. Silva, Catarina N.S.; Broadhurst, Matt K.; Dias, José H.; Cattani, André P.; Spach, Henry L.. "The effects of Nordmøre-grid bar spacings on catches in a Brazilian artisanal shrimp fishery". Fisheries Research 127-128 (2012): 188-193. http://dx.doi.org/10.1016/j.fishres.2012.01.004.
    10.1016/j.fishres.2012.01.004
  26. Silva, Catarina N. S.; Dias, Jose H.; Cattani, Andre P.; Spach, Henry L.. "Relative efficiency of square-mesh codends in an artisanal fishery in southern Brazil". Latin American Journal of Aquatic Research 40 1 (2012): 124-133.
    10.3856/vol40-issue1-fulltext-12
  27. Silva, Catarina N. S.; Broadhurst, Matt K.; Schwingel, Andréia; Dias, José H.; Cattani, André P.; Spach, Henry L.. "Refining a Nordmøre-grid for a Brazilian artisanal penaeid-trawl fishery". Fisheries Research 109 1 (2011): 168-178.
    10.1016/j.fishres.2011.01.035
  28. Planas, M.; Quintas, P.; Chamorro, a; Silva, C.. "Female maturation, egg characteristics and fatty acids profile in the seahorse Hippocampus guttulatus". Animal reproduction science 122 1-2 (2010): 66-73.
    10.1016/j.anireprosci.2010.07.008
Artigo em revista (magazine)
  1. Silva, Catarina NS. "Tradições na Ria", SAL – Boletim Municipal de Cultura, Aveiro, 2009
Poster em conferência
  1. Silva, Catarina NS; Macdonald, Helen; Hadfield, Mark; Cryer, Martin; Gardner, Jonathan P. A.. "Ocean currents predict fine scale genetic structure and source-sink dynamics in a marine invertebrate coastal fishery". Trabalho apresentado em 53rd European Marine Biology Symposium, 2018.
  2. Silva, Catarina NS; Nicholas P. Murphy; James J. Bell; Bridget S. Green; Cecilia Villacorta-Rath; Jan M. Strugnell. "Genomics of speciation in Jasus spp.". Trabalho apresentado em Australian Marine Sciences Association - Canyons to Coast, 2018.
  3. Silva, Catarina NS; Strugnell, J. "Sex-linked markers for blacklip and greenlip abalone". Trabalho apresentado em International Symposium of Genetics in Aquaculture XIII, 2018.
  4. Tiffany A. Kosch; Silva, Catarina NS; Laura A. Brannelly; Lee Berger; Lee F. Skerratt. "Conservation genomics of the endangered Australian Corroboree Frog". Trabalho apresentado em JCU Science Research Festival, 2017.
  5. Row, Jeff; Wan, Ho­Yi; Silva, Catarina NS; Menton, Mitra; Gygly, Andrew; Christiansen, Melanie; Fedy, Brad. "Landscape genetics under varying landscape characteristics". Trabalho apresentado em 2nd Annual Meeting in Conservation Genetics, 2016.
  6. Silva, Catarina NS; Hagen, IJ; Billing, AM ; Kemppainen, P; Jensen, H; Husby, A. "Insights into the evolution of phenotypic traits in house sparrows". Trabalho apresentado em Conference on Conservation Genomics, 2016.
  7. Cattani, André Pereira; Schwingel, Andréia; Budel, Bianca Rausche; Guanais, José Hugo; Cartagena, Beatriz Fernanda Chincnhilla; Silva, Catarina NS; Passos, Ana Carolina; Vigário, Daniele Coelho; Spach, Henry Louis. "Avaliação da ictiofauna do bycatch da pesca do camarão sete-barbas (Xiphopenaeus kroyeri) do município de Pontal do Paraná". Trabalho apresentado em XXII Semana Nacional de Oceanografia, 2010.
  8. Silva, Catarina NS; Schwingel, Andréia; Budel, Bianca Rauscher; Gondim Guanais, José Hugo Dias; Broadhurst, Mattheus Kenyon; Cattani, André Pereira; Cartagena, Beatriz Fernanda Chinchilla; Spach, Henry Louis. "Efeitos de grelhas Nordmore no bycatch da pesca artesanal do camarão no Paraná, Brasil". Trabalho apresentado em XXII Semana Nacional de Oceanografia, 2010.
  9. Silva, Catarina NS; Schwingel, A.; Budel, B. R.; Gondim Guanais, J. H. D.; Broadhurst, M.K.; Cattani, A. P.; Cartagena, B. F. C.; Spach, H. L.. "Eficiência de ensacadores de malha quadrada na pesca artesanal do camarão no Paraná, Brasil". Trabalho apresentado em XXII Semana Nacional de Oceanografia, 2010.
  10. Catarina, N.S. Silva; Schwingel, A.; Broadhurst, M. K.; Spach, H. L.; Cattani, A.; Gondim Guanais, J. H. D.. "Efeitos de redutores de captura incidental no bycatch da pesca artesanal do camarão sete-barbas (Xiphopenaeus kroyeri, Heller 1862) no litoral do Paraná, Brasil". Trabalho apresentado em IV Brazilian Congress of Oceanography, 2010.
  11. JP Alvarez; A Blanco; Silva, Catarina NS; M Planas. "Proximate biochemical composition and enzymatic activities in eggs of farmed seahorses Hippocampus guttulatus and H. hippocampus (Project Hippocampus)". Trabalho apresentado em World Aquaculture 2009, 2009.
  12. Planas, M; Quintas, P; Silva, Catarina NS. "Snout abnormalities in young seahorses (Hippocampus guttulatus) (Project HIPPOCAMPUS)". Trabalho apresentado em World Aquaculture 2009, 2009.
Pré-impressão
  1. Sally C. Y. Lau; Nerida G. Wilson; Nicholas R. Golledge; Tim R. Naish; Phillip C. Watts; Catarina N. S. Silva; Ira R. Cooke; et al. "Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial Period". 2023. https://doi.org/10.1101/2023.01.29.525778.
    10.1101/2023.01.29.525778
  2. Silva, Catarina NS; Dainys, Justas; Simmons, Sean; Vienožinskis, Vincentas; Audzijonyte, Asta. "A scalable open-source framework for machine learning based image collection, annotation and classification: a case study for automatic fish species identification". 2022. http://dx.doi.org/10.1101/2022.06.29.498112.
    10.1101/2022.06.29.498112
  3. Catarina NS Silva; Justas Dainys; Sean Simmons; Asta Audzijonyte. "A machine learning based image classification method to estimate fish sizes from images without a specified reference object". 2022. https://doi.org/10.1101/2022.12.27.521854.
    10.1101/2022.12.27.521854
  4. Catarina N.S. Silva; Nicholas P. Murphy; James J. Bell; Bridget S. Green; Guy Duhamel; Andrew C. Cockcroft; Cristián E. Hernández; Jan M. Strugnell. "Global drivers of diversification in a marine species complex". 2019. https://doi.org/10.1101/2019.12.13.874883.
    10.1101/2019.12.13.874883
  5. Kosch, T.A.; Silva, C.N.S.; Brannelly, L.A.; Roberts, A.A.; Lau, Q.; Berger, L.; Skerratt, L.F.. "Genetic potential for disease resistance in a critically endangered frog decimated by chytridiomycosis". 2018. https://www.biorxiv.org/content/10.1101/247999v1.full.
    10.1101/247999
Recurso online
  1. Strugnell, J; Silva, Catarina NS. Curious Kids: why are some shells smooth and some shells corrugated?. 2017. https://theconversation.com/curious-kids-why-are-some-shells-smooth-and-some-shells-corrugated-77019.
  2. Silva, Catarina NS. Same species, different genes: temperature tolerance and body size in the genes of the Chinook salmon. 2014. https://oceanbites.org/same-species-different-genes-temperature-tolerance-and-body-size-in-the-genes-of-the-chinook-salmon/.
  3. Silva, Catarina NS. Supermom of the depths: octopus guards its eggs for the longest period ever observed. 2014. https://oceanbites.org/supermom-of-the-depths-octopus-guards-its-eggs-for-the-longest-period-ever-observed/.
  4. Silva, Catarina NS. Are whale sharks in trouble?. 2014. https://oceanbites.org/are-whale-sharks-in-trouble/.
  5. Silva, Catarina NS. Coral larvae will stay at their birth reef in warmer seas. 2014. https://oceanbites.org/coral-larvae-will-stay-at-their-birth-reef-in-warmer-seas/.
  6. Silva, Catarina NS. Hotspots of unwanted catches: the global issue of bycatch. 2014. https://oceanbites.org/hotspots-of-unwanted-catches-the-global-issue-of-bycatch/.
  7. Silva, Catarina NS. The far-reaching benefits of marine reserves. 2014. https://oceanbites.org/the-far-reaching-benefits-of-marine-reserves/.
  8. Silva, Catarina NS. Not so alike after all: European hake populations might be locally adapted. 2014. https://oceanbites.org/not-so-alike-after-all-european-hake-populations-might-be-locally-adapted/.
  9. Silva, Catarina NS. Plenty of fish in the sea? Appearances can be deceiving. 2014. https://oceanbites.org/plenty-of-fish-in-the-sea-appearances-can-be-deceiving/.
  10. Silva, Catarina NS. A call for sustainable fisheries. 2012. http://earthbook2012.org/author/400.
  11. Silva, Catarina NS; Barroso C.M.M.; Pacheco M.G.G.. PescAveiro – Caracterização dos recursos pesqueiros da região de Aveiro.. 2008. www.pescaveiro.org.
Relatório
  1. Green, C.; Hamer, P.; Ingram, B.; Silva, Catarina NS; Strugnell, J.; Whitelaw, B.. 2020. Increasing knowledge of Victoria´s growing recreational yellowtail kingfish fishery. https://vfa.vic.gov.au/__data/assets/pdf_file/0004/509422/RFGP-Kingfish-report-_FINAL-Jan-2020.pdf.
  2. Strugnell, JM; Silva, Catarina NS. 2017. Genetic diversity audit of farm held stocks of greenlip and blacklip abalone..
  3. Whitelaw, B; Silva, Catarina NS; Strugnell, JM; Green, C. 2017. Assessing genetic diversity and population structure in yellowtail kingfish, Seriola lalandi, in Victoria, Australia.
  4. Hannan, DA; Constable, HB; Silva, Catarina NS; Bell, JJ; Ritchie, PA; Gardner, JPA. 2016. Genetic population structure, connectivity and barriers to gene flow amongst New Zealand’s open sandy shore and estuarine coastal taxa.. https://fs.fish.govt.nz/Doc/24267/AEBR-172-Genetic-Connectivity.pdf.ashx.
  5. Dunphy, B J ; Silva, Catarina N S; Gardner, J P A. 2015. Testing techniques for tracing the provenance of green-lipped mussel spat washed up on Ninety Mile Beach. https://docs.niwa.co.nz/library/public/NZAEBR-164.pdf.
Tese / Dissertação
  1. Silva, Catarina NS. "Spatial and temporal genetic structure of the New Zealand scallop Pecten novaezelandiae: A multidisciplinary perspective". Doutoramento, Victoria University of Wellington, 2015. http://hdl.handle.net/10063/4399.
  2. Silva, Catarina NS. "Efficiency of bycatch reduction devices in a Brazilian artisanal penaeid-trawl fishery". Mestrado, Universidade Federal do Paraná Centro de Estudos do Mar, 2011. https://acervodigital.ufpr.br/xmlui/handle/1884/25740.
Atividades

Apresentação oral de trabalho

Título da apresentação Nome do evento
Anfitrião (Local do evento)
2024/10/07 Invited plenary speaker: "Innovations and Challenges in Advancing AI for Fish Size Estimation from Images" European Inland Fisheries and Aquaculture Advisory Commission (EIFAAC) International Symposium 2024
Sveucilište u Zagrebu Agronomski fakultet (Croácia)
2024/03/07 Estimating fish sizes from angler’s photos using a machine learning classification method 9th World Fisheries Congress
2023/05/03 Fishing for images: Tools for automatic identification of fish species and size from citizen science images DCV.Talks
Departamento de Ciências da Vida - Universidade de Coimbra (Coimbra, Portugal)
2023/02/28 The power of artificial intelligence and citizen science for assessing fish populations Research Seminar for the Department of Ecology & Vertebrate Zoology
University of Lódz (Polónia)
2022/12/15 Estimating fish sizes from anglers' photos and how to unlock access to lots of new data Online Workshop: Can citizen science, smartphone app and social media data be used for recreational fisheries management?
Nature Research Centre (Lituânia)
2022/09/26 Angler and social media data for artificial intelligence models of fish species and size identification Recreational angling effort and engagement in the digital age
Nature Research Centre (Lituânia)
2022/09/20 A scalable open-source framework to leverage the power of citizen science and machine learning in recreational and small-scale fisheries ICES Annual Science Conference
ICES (Dublin, Irlanda)
2022/09/14 Predicting fish size classes with image classification models 4th World Small Scale Fisheries Conference
(Paola, Malta)
2022/06/06 Data science for biodiversity monitoring: challenges, opportunities and applications Women in Data Science (WiDS) Portugal
Instituto Superior de Contabilidade e Administracao do Porto (Portugal)
2022/05/03 Developing open source tools for automated fish species identification for recreational fisheries Online Workshop "Machine learning tools for species identification and fish size estimation in recreational and small-scale fisheries"
Nature Research Centre (Remote, Lituânia)
2021/09/21 Using genetics and oceanographic modelling to investigate connectivity of rock lobsters across ocean basins World Fisheries Congress 2021
(Remote - Adelaide, Austrália)
2019/10 Using genetics and oceanographic modelling to investigate inter-species connectivity across ocean basins MarineOmics meeting
(Townsville, Austrália)
2019/07 The demographic history underlying genomic divergence among rock lobsters (Jasus spp.) AMSA 2019 - Marine Science for a Blue Economy
(Austrália)
2018/10 Genomics of rock lobsters (Jasus spp) Centre for Tropical Bioinformatics and Molecular Biology - Opening conference
James Cook University (Townsville, Austrália)
2018/07/05 Drivers of diversification in rock lobsters Canyons to Coast
Australian Marine Sciences Association (Adelaide, Austrália)
2018/03/13 From genes to landscape: the potential of landscape genetics for eco-evolutionary research Tropical Landscape Joint Venture Science with Sushi Seminar
CSIRO - Commonwealth Scientific and Industrial Research Organisation (Townsville, Austrália)
2017/09 Adaptation and dispersal in rock lobsters (Jasus spp) TROPICAL LANDSCAPES JOINT VENTURE SKIM DAY
CSIRO and James Cook University (Townsville, Austrália)
2017/04 Reproducibility in population genomics Adventures in Bioinformatics
James Cook University (Townsville, Austrália)
2017/04 Genetics in the wild Aquaculture Genetics Meeting
Aquaculture Genetics research group - JCU (Townsville, Austrália)
2016/09 Genetics and plasticity of phenotypic traits in wild populations Ecology and Evolutionary Biology Seminar
University of Helsinki (Helsingin yliopisto) (Helsinki, Finlândia)
2015/03 Population genetics of the New Zealand scallop Pecten novaezelandiae: a multidisciplinary perspective Ecology & Evolution Seminar Series
Victoria University of Wellington (Wellington, Nova Zelândia)
2015 Population genetics of the endemic New Zealand scallop: a multidisciplinary approach Seminar at the Centre for Biodiversity Dynamics
Norwegian University of Science and Technology (Trondheim, Noruega)
2015 Population genetics in the wild: two case studies. Seminar at the Metapopulation Research Centre
University of Helsinki (Helsinki, Finlândia)
2014/05 Application of genetic markers to the management of the New Zealand scallop ECSA54 - Coastal Systems under change: tuning assessment and management tools
ECSA (Sesimbra, Portugal)
2014/04 Population structure of the New Zealand scallop: using genetic markers for informing fisheries management and conservation Ecology & Evolution Seminar Series
Victoria University of Wellington (Wellington, Nova Zelândia)
2013/07 Capacity building for chapters 26th International Congress for Conservation Biology
Society for Conservation Biology (Baltimore, Estados Unidos)
2013/07 Development and characterisation of microsatellite markers for management and conservation of the New Zealand scallop AMSA2013 Golden Jubilee Conference
Australian Marine Sciences Association (Gold Coast, Austrália)
2013/03 Multi-species coastal marine connectivity - progress report Biodiversity Research Advisory Group annual meeting 2013
New Zealand Ministry for Primary Industries (Wellington, Nova Zelândia)
2012/09 Integrating science with community-based conservation Society for Conservation Biology Oceania section conference
Society for Conservation Biology (Drawin, Austrália)
2012/05 Multi-species coastal marine connectivity - progress report Biodiversity Research Advisory Group annual meeting 2012
New Zealand Ministry for Primary Industries (Wellington, Nova Zelândia)

Orientação

Título / Tema
Papel desempenhado
Curso (Tipo)
Instituição / Organização
2024/09/01 - Atual Unravelling the potential of electronic monitoring systems for automated bycatch estimation
Orientador
Biosciences (Doutoramento)
Universidade de Coimbra, Portugal
2018/01 - 2021/12 Quaternary evolutionary persistence of Southern Ocean benthic taxa
Coorientador de Sally Cheuk Ying Lau
Doctor of Philosophy (Doutoramento)
James Cook University, Austrália
2019/12 - 2020/08 Meta-analysis of the genetic of range-shifting species
Orientador de Johanna Johansson
Research Project (Mestrado)
James Cook University, Austrália
2019/01 - 2019/06 Population genetics of range expanding Yellowtail Kingfish (Seriola lalandi) distributed in Australia and New Zealand waters
Orientador de Devon Baker
Research Project (Mestrado)
James Cook University, Austrália
2018/12 - 2019/06 Genetic diversity and population structure of Yellowtail Kingfish (Seriola lalandi)
Coorientador de Sharisse Ockwell
Research project (Mestrado)
James Cook University, Austrália
2018/05 - 2018/12 Investigation of the environmental determinants of the current and future spatial distribution in spiny lobsters, genus Jasus
Orientador de Jason Tepker
Research Project (Mestrado)
James Cook University, Austrália
2018/01 - 2018/08 Genetic Sex Determination within the Phylum Mollusca
Orientador de Sophie Huiyi Hou
Research project (Mestrado)
James Cook University, Austrália
2017/11 - 2018/03 The Population Structure of The Southern Ocean Octopi Species Adelieledone polymorpha using the Barcode of Life Gene mtCOI
Orientador de Jodi Coia
Research Project (Mestrado)
James Cook University, Austrália

Organização de evento

Nome do evento
Tipo de evento (Tipo de participação)
Instituição / Organização
2024/05/06 - 2024/05/06 Workshop | CC@UC – The collaborative construction of a citizen science hub at the University of Coimbra. Open Science Communities at UC 2024. Organised by Ana Santos, Catarina Silva, Filipa Bessa and Rita Campos. (2024/05) Universidade de Coimbra, Portugal
2024/01/31 - 2024/01/31 Workshop | iiiUC trainings: Citizen Science at the UC: Co-creation activity. Organised by Ana Santos, Catarina Silva, Filipa Bessa and Rita Campos. (2024/01) Universidade de Coimbra, Portugal
2023/11/30 - 2023/11/30 Machine learning para classificação de espécies com base em imagens (2023/11/29 - 2023/11/30)
Oficina (workshop) (Coorganizador)
Centro de Ciências do Mar e do Ambiente, Portugal
2023/11/27 - 2023/11/28 Laboratório de Participação no 4o Encontro Nacional de Ciência Cidadã: "CC @ UC - Ciência Cidadã na/com a Universidade de Coimbra" (2023/11/27 - 2023/11/28)
Oficina (workshop) (Coorganizador)
Rede Portuguese de Ciência Cidadã , Portugal
2022/05/02 - 2022/05/03 Online Workshop "Machine learning tools for species identification and fish size estimation in recreational and small-scale fisheries" (2022/05/02 - 2022/05/03)
Oficina (workshop) (Coorganizador)
Gamtos tyrimr centras, Lituânia
2020/06 - 2020/06 Centre for Sustainable Tropical Fisheries and Aquaculture Webinar Series (2020/06 - 2020/06)
Seminário (Coorganizador)
James Cook University, Austrália
2017 - 2020 Journal Club - Centre for Tropical Bioinformatics and Molecular Biology (2017 - 2020)
Encontro (Coorganizador)
James Cook University, Austrália
2018/07 - 2018/07 International Symposium of Genetics in Aquaculture XIII (2018/07)
Conferência (Membro da Comissão Organizadora)
James Cook University, Austrália
2016/11 - 2016/11 Science goes Kindergarten (Tiede tulee tarhaan) is a series of science workshops for children (2016/11 - 2016/11)
Oficina (workshop) (Coorganizador)
Helsingin yliopisto, Finlândia
2016/09/12 - 2016/10/14 Organising Committee member of "2nd Finnish Molecular Ecology and Evolution Symposium" (2016/10/12 - 2016/10/14) Helsingin yliopisto, Finlândia
2013/07/21 - 2013/07/21 "Beyond plants in the ground: creating opportunities and wider linkages from a habitat restoration project". Capacity-building for SCB Chapters Workshop organised by Kerry Charles and Catarina Silva, Victoria University of Wellington Chapter. International Congress for Conservation Biology 2013, Baltimore, Maryland. (2013/07 - 2013/07)
Congresso (Coorganizador)
Society for Conservation Biology, Estados Unidos
2007/01/10 - 2007/04/02 Organising Committee member of "XI Encontro Nacional de Estudantes de Biologia, Aveiro, Portugal" (2007/03/30) Universidade de Aveiro, Portugal

Participação em evento

Descrição da atividade
Tipo de evento
Nome do evento
Instituição / Organização
2024/09/25 - 2024/09/25 REDUCE poster presentation: "Reducing bycatch of threatened megafauna in the East Central Atlantic with ML"
Seminário
2024 Fisheries Science Seminar - Artificial Intelligence
Directorate-General for Maritime Affairs and Fisheries, Bélgica
2024/03 - 2024/07 Artificial intelligence in species, size and individual identification can enhance data-limited fisheries assessments
Congresso
9th World Fisheries Congress
2024/04/18 - 2024/04/20 REDUCE Project Kick-off meeting
Encontro
Universitat de Barcelona - Campus Mundet, Espanha
2023/11/27 - 2023/11/28 ENCC2023 - 4o Encontro Nacional de Ciência Cidadã
Conferência
Rede Portuguese de Ciência Cidadã , Portugal
2023/06/21 - 2023/07/14 EQUAL.STEAM: Dimensão de género no ensino, investigação e supervisão
Outro
Universidade de Coimbra, Portugal
2021/11/25 - 2021/11/26 Encontro Nacional de Ciência Cidadã 2021
Encontro
Rede Portuguese de Ciência Cidadã , Portugal
2018/07/10 - 2018/07/13 useR! 2018 - The conference for users of R
Conferência
2008/10 - 2008/10 Learning Opportunity: “What´s out there? Building capacity for biodiversity data collection, dissemination and analysis”
Congresso
IV World Conservation Congress
International Union for Conservation of Nature, Suiça

Júri de grau académico

Tema
Tipo de participação
Nome do candidato (Tipo de grau)
Instituição / Organização
2024/07/15 Matrix and preservation method suitability for genetic analysis in cetaceans
Arguente principal
Miguel Leal e Rigor (Mestrado)
Universidade de Coimbra, Portugal
2024/07/02 Phylogeny of Southern Ocean squid
Arguente principal
Lucas Pinheiro Cortes Pereira Bastos (Mestrado)
Universidade de Coimbra, Portugal
2023/05/15 Population Genetic and Genomic Approaches for the Management of the Blackfoot Paua, Haliotis iris Gmelin 1791, within the Genus Context
Arguente
Giulia Trauzzi (Doutoramento)
Victoria University of Wellington, Nova Zelândia

Arbitragem científica em conferência

Nome da conferência Local da conferência
2018/01 - 2019/12 Annual Conference of the Centre for Tropical Bioinformatics and Molecular Biology James Cook University

Arbitragem científica em revista

Nome da revista (ISSN) Editora
2022/09 - Atual Reviews in Fish Biology and Fisheries (1573-5184)

Comissão de avaliação

Descrição da atividade
Tipo de assessoria
Instituição / Organização Entidade financiadora
2023/09 - 2023/09 Project Proposal Evaluation
Avaliador
Narodowe Centrum Nauki, Polónia Narodowe Centrum Nauki
2021/08 - 2021/08 Project Proposals Evaluation
Avaliador
Stazione Zoologica Anton Dohrn Napoli, Itália Stazione Zoologica Anton Dohrn Napoli

Curso / Disciplina lecionado

Disciplina Curso (Tipo) Instituição / Organização
2024/03/14 - 2024/03/14 Harnessing genetics and artificial Intelligence for understanding animal ecology Seminários em Biologia (Doutoramento) Universidade de Évora, Portugal
2023/04/18 - 2023/04/18 Modern research tools in animal ecology - examples from genetics and artificial intelligence Seminários em Biologia (Doutoramento) Universidade de Évora, Portugal
2016/09 - 2016/11 2 lectures and six small-group discussion sessions leading up to a two-day seminar focusing on applied conservation issues Population Biology in Fragmented Landscapes (Master) Helsingin yliopisto, Finlândia
2016/02 - 2016/02 Genome Wide Association Studies (GWAS) Introduction to Ecological Genomics Helsingin yliopisto, Finlândia
2015/10 - 2015/10 Genomics and the challenging translation into conservation practice Conservation Genetics (Doctor of Philosophy) Helsingin yliopisto, Finlândia
2015/03 - 2015/05 Current Issues in Marine Science Current Issues in Marine Science (Master) Victoria University of Wellington, Nova Zelândia
2014/02 - 2014/02 How does environmental variability affect intertidal community structure? A multivariate approach SPECIAL TOPIC: Field Marine Science Victoria University of Wellington, Nova Zelândia
2012 - 2013 Using molecular markers to inform marine conservation Applied Marine Biology (Master) Victoria University of Wellington, Nova Zelândia
2012 - 2013 Laboratory sessions Biology of Animals (Bachelor) Victoria University of Wellington, Nova Zelândia
2010/06 - 2010/07 Marine Invertebrates Biological Diversity (Licenciatura) Universidade Federal do Paraná, Brasil

Membro de associação

Nome da associação Tipo de participação
2022/01 - Atual As Raparigas do Código Mentor - Python for Data Science; Organising Committee Member - Junior Tech Fest
2021/01 - Atual Cartas com Ciência STEM penpal (Exchanging letters with a Portuguese student to discuss higher education pathways, STEM career journeys, and overcoming obstacles. Inspiring the student to explore a future in STEM.)
2020/01 - 2020/12 Genetics Society of Australasia Member
2012/03 - 2014/01 Society for Conservation Biology - VUW Chapter Vice-President
2013/08 - 2013/11 WWF New Zealand Outreach Administration Support

Outro júri / avaliação

Descrição da atividade Instituição / Organização
2018/07/01 - 2018/07/05 AMSA 2018 Student Awards – Oral Presentation Judge

Revisão ad hoc de artigos em revista

Nome da revista (ISSN) Editora
2020 - Atual Molecular Ecology
2019 - Atual Ecography
2017 - Atual Marine and Coastal Fisheries
2017 - Atual Molecular Ecology Resources
2012 - Atual Ocean and Coastal Management

Tutoria

Tópico Nome do aluno
2019 - 2020 Population genomics of black tiger prawns Penaeus monodon to understand the wild fishery and aquaculture production (PhD thesis, James Cook University) Nga Vu
2018 - 2020 Demography and trophic relationships of squid paralarvae in an upwelling area (PhD thesis, University of Vigo) Elsa García Mayoral
2018 - 2018 Developing hatchery culture techniques for the black-lip rock oyster, Saccostrea echinata, to support Aboriginal economic development in northern Australia (PhD Thesis, University of the Sunshine Coast) Samantha Nowland
Distinções

Prémio

2018 CSTFA Early Career Researcher Development Grant
Centre for Sustainable Tropical Fisheries and Aquaculture, Austrália
2018 useR!2018 Scholarship Attendance
2017 Best group presentation JCU Early Career Researchers Professional Development Workshop
James Cook University, Austrália
2017 CSTFA Early Career Researcher Development Grant
Centre for Sustainable Tropical Fisheries and Aquaculture, Austrália
2014 Kathleen Stewart Postgraduate Scholarship
Victoria University of Wellington, Nova Zelândia
2014 VUW PhD Submission Scholarship
Victoria University of Wellington, Nova Zelândia
2013 Victoria University of Wellington Students Association Sponsorship
Victoria University of Wellington, Nova Zelândia
2013 Society for Conservation Biology Travel Award
Society for Conservation Biology, Estados Unidos
2013 VUW Faculty of Science Strategic Research Grant
Victoria University of Wellington, Nova Zelândia
2012 Victoria University of Wellington Students Association Sponsorship
Victoria University of Wellington, Nova Zelândia
2012 Society for Conservation Biology Travel Award
Society for Conservation Biology, Estados Unidos
2011 Bolsa de pesquisa CNPq
Conselho Nacional de Desenvolvimento Científico e Tecnológico, Brasil
2011 Victoria Doctoral Scholarship
Victoria University of Wellington, Nova Zelândia
2009 Bolsa de pesquisa CAPES
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Brasil
2008 ERASMUS Student Mobility for Placements